149bd79ccSDebojyoti Ghosh 249bd79ccSDebojyoti Ghosh /* 349bd79ccSDebojyoti Ghosh Defines the basic matrix operations for the KAIJ matrix storage format. 449bd79ccSDebojyoti Ghosh This format is used to evaluate matrices of the form: 549bd79ccSDebojyoti Ghosh 649bd79ccSDebojyoti Ghosh [I \otimes S + A \otimes T] 749bd79ccSDebojyoti Ghosh 849bd79ccSDebojyoti Ghosh where 949bd79ccSDebojyoti Ghosh S is a dense (p \times q) matrix 1049bd79ccSDebojyoti Ghosh T is a dense (p \times q) matrix 1149bd79ccSDebojyoti Ghosh A is an AIJ (n \times n) matrix 1249bd79ccSDebojyoti Ghosh I is the identity matrix 1349bd79ccSDebojyoti Ghosh 1449bd79ccSDebojyoti Ghosh The resulting matrix is (np \times nq) 1549bd79ccSDebojyoti Ghosh 1649bd79ccSDebojyoti Ghosh We provide: 1749bd79ccSDebojyoti Ghosh MatMult() 1849bd79ccSDebojyoti Ghosh MatMultAdd() 1949bd79ccSDebojyoti Ghosh MatInvertBlockDiagonal() 2049bd79ccSDebojyoti Ghosh and 2149bd79ccSDebojyoti Ghosh MatCreateKAIJ(Mat,PetscInt,PetscInt,const PetscScalar[],const PetscScalar[],Mat*) 2249bd79ccSDebojyoti Ghosh 2349bd79ccSDebojyoti Ghosh This single directory handles both the sequential and parallel codes 2449bd79ccSDebojyoti Ghosh */ 2549bd79ccSDebojyoti Ghosh 2649bd79ccSDebojyoti Ghosh #include <../src/mat/impls/kaij/kaij.h> /*I "petscmat.h" I*/ 2749bd79ccSDebojyoti Ghosh #include <../src/mat/utils/freespace.h> 2849bd79ccSDebojyoti Ghosh #include <petsc/private/vecimpl.h> 2949bd79ccSDebojyoti Ghosh 3049bd79ccSDebojyoti Ghosh /*@C 3149bd79ccSDebojyoti Ghosh MatKAIJGetAIJ - Get the AIJ matrix describing the blockwise action of the KAIJ matrix 3249bd79ccSDebojyoti Ghosh 3349bd79ccSDebojyoti Ghosh Not Collective, but if the KAIJ matrix is parallel, the AIJ matrix is also parallel 3449bd79ccSDebojyoti Ghosh 3549bd79ccSDebojyoti Ghosh Input Parameter: 3649bd79ccSDebojyoti Ghosh . A - the KAIJ matrix 3749bd79ccSDebojyoti Ghosh 3849bd79ccSDebojyoti Ghosh Output Parameter: 3949bd79ccSDebojyoti Ghosh . B - the AIJ matrix 4049bd79ccSDebojyoti Ghosh 4149bd79ccSDebojyoti Ghosh Level: advanced 4249bd79ccSDebojyoti Ghosh 4349bd79ccSDebojyoti Ghosh Notes: The reference count on the AIJ matrix is not increased so you should not destroy it. 4449bd79ccSDebojyoti Ghosh 4549bd79ccSDebojyoti Ghosh .seealso: MatCreateKAIJ() 4649bd79ccSDebojyoti Ghosh @*/ 4749bd79ccSDebojyoti Ghosh PetscErrorCode MatKAIJGetAIJ(Mat A,Mat *B) 4849bd79ccSDebojyoti Ghosh { 4949bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 5049bd79ccSDebojyoti Ghosh PetscBool ismpikaij,isseqkaij; 5149bd79ccSDebojyoti Ghosh 5249bd79ccSDebojyoti Ghosh PetscFunctionBegin; 5349bd79ccSDebojyoti Ghosh ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIKAIJ,&ismpikaij);CHKERRQ(ierr); 5449bd79ccSDebojyoti Ghosh ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQKAIJ,&isseqkaij);CHKERRQ(ierr); 5549bd79ccSDebojyoti Ghosh if (ismpikaij) { 5649bd79ccSDebojyoti Ghosh Mat_MPIKAIJ *b = (Mat_MPIKAIJ*)A->data; 5749bd79ccSDebojyoti Ghosh 5849bd79ccSDebojyoti Ghosh *B = b->A; 5949bd79ccSDebojyoti Ghosh } else if (isseqkaij) { 6049bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *b = (Mat_SeqKAIJ*)A->data; 6149bd79ccSDebojyoti Ghosh 6249bd79ccSDebojyoti Ghosh *B = b->AIJ; 6349bd79ccSDebojyoti Ghosh } else { 6449bd79ccSDebojyoti Ghosh *B = A; 6549bd79ccSDebojyoti Ghosh } 6649bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 6749bd79ccSDebojyoti Ghosh } 6849bd79ccSDebojyoti Ghosh 6949bd79ccSDebojyoti Ghosh /*@C 7049bd79ccSDebojyoti Ghosh MatKAIJGetS - Get the S matrix describing the shift action of the KAIJ matrix 7149bd79ccSDebojyoti Ghosh 720567c835SRichard Tran Mills Not Collective; the entire S is stored and returned independently on all processes. 7349bd79ccSDebojyoti Ghosh 7449bd79ccSDebojyoti Ghosh Input Parameter: 7549bd79ccSDebojyoti Ghosh . A - the KAIJ matrix 7649bd79ccSDebojyoti Ghosh 7749bd79ccSDebojyoti Ghosh Output Parameter: 7849bd79ccSDebojyoti Ghosh . S - the S matrix, in form of a scalar array in column-major format 7949bd79ccSDebojyoti Ghosh 8031a97b9aSRichard Tran Mills Notes: 8131a97b9aSRichard Tran Mills The dimensions of the output array can be determined by calling MatGetBlockSizes() on the KAIJ matrix. 8231a97b9aSRichard Tran Mills The row block and column block sizes returned will correspond to the number of rows and columns, respectively, in S. 8331a97b9aSRichard Tran Mills 8449bd79ccSDebojyoti Ghosh Level: advanced 8549bd79ccSDebojyoti Ghosh 8631a97b9aSRichard Tran Mills .seealso: MatCreateKAIJ(), MatGetBlockSizes() 8749bd79ccSDebojyoti Ghosh @*/ 8849bd79ccSDebojyoti Ghosh PetscErrorCode MatKAIJGetS(Mat A,const PetscScalar **S) 8949bd79ccSDebojyoti Ghosh { 9049bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *b = (Mat_SeqKAIJ*)A->data; 9149bd79ccSDebojyoti Ghosh PetscFunctionBegin; 9249bd79ccSDebojyoti Ghosh *S = b->S; 9349bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 9449bd79ccSDebojyoti Ghosh } 9549bd79ccSDebojyoti Ghosh 9649bd79ccSDebojyoti Ghosh /*@C 9731a97b9aSRichard Tran Mills MatKAIJGetT - Get the transformation matrix T associated with the KAIJ matrix 9849bd79ccSDebojyoti Ghosh 990567c835SRichard Tran Mills Not Collective; the entire T is stored and returned independently on all processes 10049bd79ccSDebojyoti Ghosh 10149bd79ccSDebojyoti Ghosh Input Parameter: 10249bd79ccSDebojyoti Ghosh . A - the KAIJ matrix 10349bd79ccSDebojyoti Ghosh 10449bd79ccSDebojyoti Ghosh Output Parameter: 10549bd79ccSDebojyoti Ghosh . T - the T matrix, in form of a scalar array in column-major format 10649bd79ccSDebojyoti Ghosh 10731a97b9aSRichard Tran Mills Notes: 10831a97b9aSRichard Tran Mills The dimensions of the output array can be determined by calling MatGetBlockSizes() on the KAIJ matrix. 10931a97b9aSRichard Tran Mills The row block and column block sizes returned will correspond to the number of rows and columns, respectively, in T. 11031a97b9aSRichard Tran Mills 11149bd79ccSDebojyoti Ghosh Level: advanced 11249bd79ccSDebojyoti Ghosh 11331a97b9aSRichard Tran Mills .seealso: MatCreateKAIJ(), MatGetBlockSizes() 11449bd79ccSDebojyoti Ghosh @*/ 11549bd79ccSDebojyoti Ghosh PetscErrorCode MatKAIJGetT(Mat A,const PetscScalar **T) 11649bd79ccSDebojyoti Ghosh { 11749bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *b = (Mat_SeqKAIJ*)A->data; 11849bd79ccSDebojyoti Ghosh PetscFunctionBegin; 11949bd79ccSDebojyoti Ghosh *T = b->T; 12049bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 12149bd79ccSDebojyoti Ghosh } 12249bd79ccSDebojyoti Ghosh 1230567c835SRichard Tran Mills /*@ 1240567c835SRichard Tran Mills MatKAIJSetAIJ - Set the AIJ matrix describing the blockwise action of the KAIJ matrix 1250567c835SRichard Tran Mills 1260567c835SRichard Tran Mills Logically Collective; if the AIJ matrix is parallel, the KAIJ matrix is also parallel 1270567c835SRichard Tran Mills 1280567c835SRichard Tran Mills Input Parameters: 1290567c835SRichard Tran Mills + A - the KAIJ matrix 1300567c835SRichard Tran Mills - B - the AIJ matrix 1310567c835SRichard Tran Mills 1320567c835SRichard Tran Mills Level: advanced 1330567c835SRichard Tran Mills 1340567c835SRichard Tran Mills .seealso: MatKAIJGetAIJ(), MatKAIJSetS(), MatKAIJSetT() 1350567c835SRichard Tran Mills @*/ 1360567c835SRichard Tran Mills PetscErrorCode MatKAIJSetAIJ(Mat A,Mat B) 1370567c835SRichard Tran Mills { 1380567c835SRichard Tran Mills PetscErrorCode ierr; 1390567c835SRichard Tran Mills PetscMPIInt size; 1400567c835SRichard Tran Mills 1410567c835SRichard Tran Mills PetscFunctionBegin; 1420567c835SRichard Tran Mills ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 1430567c835SRichard Tran Mills if (size == 1) { 1440567c835SRichard Tran Mills Mat_SeqKAIJ *a = (Mat_SeqKAIJ*)A->data; 1450567c835SRichard Tran Mills a->AIJ = B; 1460567c835SRichard Tran Mills } else { 1470567c835SRichard Tran Mills Mat_MPIKAIJ *a = (Mat_MPIKAIJ*)A->data; 1480567c835SRichard Tran Mills a->A = B; 1490567c835SRichard Tran Mills } 1500567c835SRichard Tran Mills PetscFunctionReturn(0); 1510567c835SRichard Tran Mills } 1520567c835SRichard Tran Mills 1530567c835SRichard Tran Mills /*@C 1540567c835SRichard Tran Mills MatKAIJSetS - Set the S matrix describing the shift action of the KAIJ matrix 1550567c835SRichard Tran Mills 1560567c835SRichard Tran Mills Logically Collective; the entire S is stored independently on all processes. 1570567c835SRichard Tran Mills 1580567c835SRichard Tran Mills Input Parameters: 1590567c835SRichard Tran Mills + A - the KAIJ matrix 1600567c835SRichard Tran Mills . p - the number of rows in S 1610567c835SRichard Tran Mills . q - the number of columns in S 1620567c835SRichard Tran Mills - S - the S matrix, in form of a scalar array in column-major format 1630567c835SRichard Tran Mills 1640567c835SRichard Tran Mills Notes: The dimensions p and q must match those of the transformation matrix T associated with the KAIJ matrix. 1650567c835SRichard Tran Mills 1660567c835SRichard Tran Mills Level: Advanced 1670567c835SRichard Tran Mills 1680567c835SRichard Tran Mills .seealso: MatKAIJGetS(), MatKAIJSetT(), MatKAIJSetAIJ() 1690567c835SRichard Tran Mills @*/ 1700567c835SRichard Tran Mills PetscErrorCode MatKAIJSetS(Mat A,PetscInt p,PetscInt q,const PetscScalar S[]) 1710567c835SRichard Tran Mills { 1720567c835SRichard Tran Mills PetscErrorCode ierr; 1730567c835SRichard Tran Mills Mat_SeqKAIJ *a = (Mat_SeqKAIJ*)A->data; 1740567c835SRichard Tran Mills 1750567c835SRichard Tran Mills PetscFunctionBegin; 1760567c835SRichard Tran Mills if (a->S) { 1770567c835SRichard Tran Mills ierr = PetscFree(a->S);CHKERRQ(ierr); 1780567c835SRichard Tran Mills } 1790567c835SRichard Tran Mills if (S) { 1800567c835SRichard Tran Mills ierr = PetscMalloc(p*q*sizeof(PetscScalar),&a->S);CHKERRQ(ierr); 1810567c835SRichard Tran Mills ierr = PetscMemcpy(a->S,S,p*q*sizeof(PetscScalar));CHKERRQ(ierr); 1820567c835SRichard Tran Mills } else a->S = NULL; 1830567c835SRichard Tran Mills 1840567c835SRichard Tran Mills a->p = p; 1850567c835SRichard Tran Mills a->q = q; 1860567c835SRichard Tran Mills 1870567c835SRichard Tran Mills PetscFunctionReturn(0); 1880567c835SRichard Tran Mills } 1890567c835SRichard Tran Mills 1900567c835SRichard Tran Mills /*@C 1910567c835SRichard Tran Mills MatKAIJSetT - Set the transformation matrix T associated with the KAIJ matrix 1920567c835SRichard Tran Mills 1930567c835SRichard Tran Mills Logically Collective; the entire T is stored independently on all processes. 1940567c835SRichard Tran Mills 1950567c835SRichard Tran Mills Input Parameters: 1960567c835SRichard Tran Mills + A - the KAIJ matrix 1970567c835SRichard Tran Mills . p - the number of rows in S 1980567c835SRichard Tran Mills . q - the number of columns in S 1990567c835SRichard Tran Mills - T - the T matrix, in form of a scalar array in column-major format 2000567c835SRichard Tran Mills 2010567c835SRichard Tran Mills Notes: The dimensions p and q must match those of the shift matrix S associated with the KAIJ matrix. 2020567c835SRichard Tran Mills 2030567c835SRichard Tran Mills Level: Advanced 2040567c835SRichard Tran Mills 2050567c835SRichard Tran Mills .seealso: MatKAIJGetT(), MatKAIJSetS(), MatKAIJSetAIJ() 2060567c835SRichard Tran Mills @*/ 2070567c835SRichard Tran Mills PetscErrorCode MatKAIJSetT(Mat A,PetscInt p,PetscInt q,const PetscScalar T[]) 2080567c835SRichard Tran Mills { 2090567c835SRichard Tran Mills PetscErrorCode ierr; 2100567c835SRichard Tran Mills PetscInt i,j; 2110567c835SRichard Tran Mills Mat_SeqKAIJ *a = (Mat_SeqKAIJ*)A->data; 2120567c835SRichard Tran Mills PetscBool isTI = PETSC_FALSE; 2130567c835SRichard Tran Mills 2140567c835SRichard Tran Mills PetscFunctionBegin; 2150567c835SRichard Tran Mills /* check if T is an identity matrix */ 2160567c835SRichard Tran Mills if (T && (p == q)) { 2170567c835SRichard Tran Mills isTI = PETSC_TRUE; 2180567c835SRichard Tran Mills for (i=0; i<p; i++) { 2190567c835SRichard Tran Mills for (j=0; j<q; j++) { 2200567c835SRichard Tran Mills if (i == j) { 2210567c835SRichard Tran Mills /* diagonal term must be 1 */ 2220567c835SRichard Tran Mills if (T[i+j*p] != 1.0) isTI = PETSC_FALSE; 2230567c835SRichard Tran Mills } else { 2240567c835SRichard Tran Mills /* off-diagonal term must be 0 */ 2250567c835SRichard Tran Mills if (T[i+j*p] != 0.0) isTI = PETSC_FALSE; 2260567c835SRichard Tran Mills } 2270567c835SRichard Tran Mills } 2280567c835SRichard Tran Mills } 2290567c835SRichard Tran Mills } 2300567c835SRichard Tran Mills a->isTI = isTI; 2310567c835SRichard Tran Mills 2320567c835SRichard Tran Mills if (a->T) { 2330567c835SRichard Tran Mills ierr = PetscFree(a->T);CHKERRQ(ierr); 2340567c835SRichard Tran Mills } 2350567c835SRichard Tran Mills if (T && (!isTI)) { 2360567c835SRichard Tran Mills ierr = PetscMalloc(p*q*sizeof(PetscScalar),&a->T);CHKERRQ(ierr); 2370567c835SRichard Tran Mills ierr = PetscMemcpy(a->T,T,p*q*sizeof(PetscScalar));CHKERRQ(ierr); 23850d19d74SRichard Tran Mills } else a->T = NULL; 2390567c835SRichard Tran Mills 2400567c835SRichard Tran Mills a->p = p; 2410567c835SRichard Tran Mills a->q = q; 2420567c835SRichard Tran Mills PetscFunctionReturn(0); 2430567c835SRichard Tran Mills } 2440567c835SRichard Tran Mills 24549bd79ccSDebojyoti Ghosh PetscErrorCode MatDestroy_SeqKAIJ(Mat A) 24649bd79ccSDebojyoti Ghosh { 24749bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 24849bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *b = (Mat_SeqKAIJ*)A->data; 24949bd79ccSDebojyoti Ghosh 25049bd79ccSDebojyoti Ghosh PetscFunctionBegin; 25149bd79ccSDebojyoti Ghosh ierr = MatDestroy(&b->AIJ);CHKERRQ(ierr); 25249bd79ccSDebojyoti Ghosh ierr = PetscFree3(b->S,b->T,b->ibdiag);CHKERRQ(ierr); 25349bd79ccSDebojyoti Ghosh ierr = PetscFree5(b->sor.w,b->sor.y,b->sor.work,b->sor.t,b->sor.arr);CHKERRQ(ierr); 25449bd79ccSDebojyoti Ghosh ierr = PetscFree(A->data);CHKERRQ(ierr); 25549bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 25649bd79ccSDebojyoti Ghosh } 25749bd79ccSDebojyoti Ghosh 25849bd79ccSDebojyoti Ghosh PetscErrorCode MatSetUp_KAIJ(Mat A) 25949bd79ccSDebojyoti Ghosh { 2600567c835SRichard Tran Mills PetscErrorCode ierr; 2610567c835SRichard Tran Mills PetscInt n; 2620567c835SRichard Tran Mills PetscMPIInt size; 2630567c835SRichard Tran Mills Mat_SeqKAIJ *seqkaij = (Mat_SeqKAIJ*)A->data; 2640567c835SRichard Tran Mills 26549bd79ccSDebojyoti Ghosh PetscFunctionBegin; 2660567c835SRichard Tran Mills ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 2670567c835SRichard Tran Mills if (size == 1) { 2680567c835SRichard Tran Mills ierr = MatSetSizes(A,seqkaij->p*seqkaij->AIJ->rmap->n,seqkaij->q*seqkaij->AIJ->cmap->n,seqkaij->p*seqkaij->AIJ->rmap->N,seqkaij->q*seqkaij->AIJ->cmap->N);CHKERRQ(ierr); 2690567c835SRichard Tran Mills ierr = PetscLayoutSetBlockSize(A->rmap,seqkaij->p);CHKERRQ(ierr); 2700567c835SRichard Tran Mills ierr = PetscLayoutSetBlockSize(A->cmap,seqkaij->q);CHKERRQ(ierr); 2710567c835SRichard Tran Mills ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 2720567c835SRichard Tran Mills ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 2730567c835SRichard Tran Mills ierr = PetscObjectReference((PetscObject)seqkaij->AIJ);CHKERRQ(ierr); 2740567c835SRichard Tran Mills } else { 2750567c835SRichard Tran Mills Mat_MPIKAIJ *a; 2760567c835SRichard Tran Mills Mat_MPIAIJ *mpiaij; 2770567c835SRichard Tran Mills IS from,to; 2780567c835SRichard Tran Mills Vec gvec; 2790567c835SRichard Tran Mills PetscScalar *T; 2800567c835SRichard Tran Mills PetscInt i,j; 2810567c835SRichard Tran Mills 2820567c835SRichard Tran Mills a = (Mat_MPIKAIJ*)A->data; 283d3f912faSRichard Tran Mills mpiaij = (Mat_MPIAIJ*)a->A->data; 2840567c835SRichard Tran Mills ierr = MatSetSizes(A,a->p*a->A->rmap->n,a->q*a->A->cmap->n,a->p*a->A->rmap->N,a->q*a->A->cmap->N);CHKERRQ(ierr); 2850567c835SRichard Tran Mills ierr = PetscLayoutSetBlockSize(A->rmap,seqkaij->p);CHKERRQ(ierr); 2860567c835SRichard Tran Mills ierr = PetscLayoutSetBlockSize(A->cmap,seqkaij->q);CHKERRQ(ierr); 2870567c835SRichard Tran Mills ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 2880567c835SRichard Tran Mills ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 2890567c835SRichard Tran Mills ierr = PetscObjectReference((PetscObject)a->A);CHKERRQ(ierr); 2900567c835SRichard Tran Mills 2910567c835SRichard Tran Mills if (a->isTI) { 2920567c835SRichard Tran Mills /* If the transformation matrix associated with the parallel matrix A is the identity matrix, then a->T will be NULL. 2930567c835SRichard Tran Mills * In this case, if we pass a->T directly to the MatCreateKAIJ() calls to create the sequential submatrices, the routine will 2940567c835SRichard Tran Mills * not be able to tell that transformation matrix should be set to the identity; thus we create a temporary identity matrix 2950567c835SRichard Tran Mills * to pass in. */ 2960567c835SRichard Tran Mills ierr = PetscMalloc(a->p*a->q*sizeof(PetscScalar),&T);CHKERRQ(ierr); 2970567c835SRichard Tran Mills for (i=0; i<a->p; i++) { 2980567c835SRichard Tran Mills for (j=0; j<a->q; j++) { 2990567c835SRichard Tran Mills if (i==j) T[i+j*a->p] = 1.0; 3000567c835SRichard Tran Mills else T[i+j*a->p] = 0.0; 3010567c835SRichard Tran Mills } 3020567c835SRichard Tran Mills } 3030567c835SRichard Tran Mills } else T = a->T; 3040567c835SRichard Tran Mills ierr = MatCreateKAIJ(mpiaij->A,a->p,a->q,a->S,T,&a->AIJ);CHKERRQ(ierr); 3050567c835SRichard Tran Mills ierr = MatCreateKAIJ(mpiaij->B,a->p,a->q,NULL,T,&a->OAIJ);CHKERRQ(ierr); 3060567c835SRichard Tran Mills if (a->isTI) { 3070567c835SRichard Tran Mills ierr = PetscFree(T);CHKERRQ(ierr); 3080567c835SRichard Tran Mills } 3090567c835SRichard Tran Mills 3100567c835SRichard Tran Mills ierr = VecGetSize(mpiaij->lvec,&n);CHKERRQ(ierr); 3110567c835SRichard Tran Mills ierr = VecCreate(PETSC_COMM_SELF,&a->w);CHKERRQ(ierr); 3120567c835SRichard Tran Mills ierr = VecSetSizes(a->w,n*a->q,n*a->q);CHKERRQ(ierr); 3130567c835SRichard Tran Mills ierr = VecSetBlockSize(a->w,a->q);CHKERRQ(ierr); 3140567c835SRichard Tran Mills ierr = VecSetType(a->w,VECSEQ);CHKERRQ(ierr); 3150567c835SRichard Tran Mills 3160567c835SRichard Tran Mills /* create two temporary Index sets for build scatter gather */ 3170567c835SRichard Tran Mills ierr = ISCreateBlock(PetscObjectComm((PetscObject)a->A),a->q,n,mpiaij->garray,PETSC_COPY_VALUES,&from);CHKERRQ(ierr); 3180567c835SRichard Tran Mills ierr = ISCreateStride(PETSC_COMM_SELF,n*a->q,0,1,&to);CHKERRQ(ierr); 3190567c835SRichard Tran Mills 3200567c835SRichard Tran Mills /* create temporary global vector to generate scatter context */ 3210567c835SRichard Tran Mills ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)a->A),a->q,a->q*a->A->cmap->n,a->q*a->A->cmap->N,NULL,&gvec);CHKERRQ(ierr); 3220567c835SRichard Tran Mills 3230567c835SRichard Tran Mills /* generate the scatter context */ 3244589b4e5SRichard Tran Mills ierr = VecScatterCreate(gvec,from,a->w,to,&a->ctx);CHKERRQ(ierr); 3250567c835SRichard Tran Mills 3260567c835SRichard Tran Mills ierr = ISDestroy(&from);CHKERRQ(ierr); 3270567c835SRichard Tran Mills ierr = ISDestroy(&to);CHKERRQ(ierr); 3280567c835SRichard Tran Mills ierr = VecDestroy(&gvec);CHKERRQ(ierr); 3290567c835SRichard Tran Mills } 3300567c835SRichard Tran Mills 3310567c835SRichard Tran Mills A->assembled = PETSC_TRUE; 33249bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 33349bd79ccSDebojyoti Ghosh } 33449bd79ccSDebojyoti Ghosh 33549bd79ccSDebojyoti Ghosh PetscErrorCode MatView_SeqKAIJ(Mat A,PetscViewer viewer) 33649bd79ccSDebojyoti Ghosh { 33749bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 33849bd79ccSDebojyoti Ghosh Mat B; 33949bd79ccSDebojyoti Ghosh 34049bd79ccSDebojyoti Ghosh PetscFunctionBegin; 34149bd79ccSDebojyoti Ghosh ierr = MatConvert(A,MATSEQAIJ,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr); 34249bd79ccSDebojyoti Ghosh ierr = MatView(B,viewer);CHKERRQ(ierr); 34349bd79ccSDebojyoti Ghosh ierr = MatDestroy(&B);CHKERRQ(ierr); 34449bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 34549bd79ccSDebojyoti Ghosh } 34649bd79ccSDebojyoti Ghosh 34749bd79ccSDebojyoti Ghosh PetscErrorCode MatView_MPIKAIJ(Mat A,PetscViewer viewer) 34849bd79ccSDebojyoti Ghosh { 34949bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 35049bd79ccSDebojyoti Ghosh Mat B; 35149bd79ccSDebojyoti Ghosh 35249bd79ccSDebojyoti Ghosh PetscFunctionBegin; 35349bd79ccSDebojyoti Ghosh ierr = MatConvert(A,MATMPIAIJ,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr); 35449bd79ccSDebojyoti Ghosh ierr = MatView(B,viewer);CHKERRQ(ierr); 35549bd79ccSDebojyoti Ghosh ierr = MatDestroy(&B);CHKERRQ(ierr); 35649bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 35749bd79ccSDebojyoti Ghosh } 35849bd79ccSDebojyoti Ghosh 35949bd79ccSDebojyoti Ghosh PetscErrorCode MatDestroy_MPIKAIJ(Mat A) 36049bd79ccSDebojyoti Ghosh { 36149bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 36249bd79ccSDebojyoti Ghosh Mat_MPIKAIJ *b = (Mat_MPIKAIJ*)A->data; 36349bd79ccSDebojyoti Ghosh 36449bd79ccSDebojyoti Ghosh PetscFunctionBegin; 36549bd79ccSDebojyoti Ghosh ierr = MatDestroy(&b->AIJ);CHKERRQ(ierr); 36649bd79ccSDebojyoti Ghosh ierr = MatDestroy(&b->OAIJ);CHKERRQ(ierr); 36749bd79ccSDebojyoti Ghosh ierr = MatDestroy(&b->A);CHKERRQ(ierr); 36849bd79ccSDebojyoti Ghosh ierr = VecScatterDestroy(&b->ctx);CHKERRQ(ierr); 36949bd79ccSDebojyoti Ghosh ierr = VecDestroy(&b->w);CHKERRQ(ierr); 37049bd79ccSDebojyoti Ghosh ierr = PetscFree3(b->S,b->T,b->ibdiag);CHKERRQ(ierr); 37149bd79ccSDebojyoti Ghosh ierr = PetscFree(A->data);CHKERRQ(ierr); 37249bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 37349bd79ccSDebojyoti Ghosh } 37449bd79ccSDebojyoti Ghosh 37549bd79ccSDebojyoti Ghosh 37649bd79ccSDebojyoti Ghosh /* --------------------------------------------------------------------------------------*/ 37749bd79ccSDebojyoti Ghosh 37849bd79ccSDebojyoti Ghosh /* zz = yy + Axx */ 37949bd79ccSDebojyoti Ghosh PetscErrorCode KAIJMultAdd_Seq(Mat A,Vec xx,Vec yy,Vec zz) 38049bd79ccSDebojyoti Ghosh { 38149bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *b = (Mat_SeqKAIJ*)A->data; 38249bd79ccSDebojyoti Ghosh Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 38349bd79ccSDebojyoti Ghosh const PetscScalar *s = b->S, *t = b->T; 38449bd79ccSDebojyoti Ghosh const PetscScalar *x,*v,*bx; 38549bd79ccSDebojyoti Ghosh PetscScalar *y,*sums; 38649bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 38749bd79ccSDebojyoti Ghosh const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 38849bd79ccSDebojyoti Ghosh PetscInt n,i,jrow,j,l,p=b->p,q=b->q,k; 38949bd79ccSDebojyoti Ghosh 39049bd79ccSDebojyoti Ghosh PetscFunctionBegin; 39149bd79ccSDebojyoti Ghosh if (!yy) { 39249bd79ccSDebojyoti Ghosh ierr = VecSet(zz,0.0);CHKERRQ(ierr); 39349bd79ccSDebojyoti Ghosh } else { 39449bd79ccSDebojyoti Ghosh ierr = VecCopy(yy,zz);CHKERRQ(ierr); 39549bd79ccSDebojyoti Ghosh } 39649bd79ccSDebojyoti Ghosh if ((!s) && (!t) && (!b->isTI)) PetscFunctionReturn(0); 39749bd79ccSDebojyoti Ghosh 39849bd79ccSDebojyoti Ghosh ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 39949bd79ccSDebojyoti Ghosh ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 40049bd79ccSDebojyoti Ghosh idx = a->j; 40149bd79ccSDebojyoti Ghosh v = a->a; 40249bd79ccSDebojyoti Ghosh ii = a->i; 40349bd79ccSDebojyoti Ghosh 40449bd79ccSDebojyoti Ghosh if (b->isTI) { 40549bd79ccSDebojyoti Ghosh for (i=0; i<m; i++) { 40649bd79ccSDebojyoti Ghosh jrow = ii[i]; 40749bd79ccSDebojyoti Ghosh n = ii[i+1] - jrow; 40849bd79ccSDebojyoti Ghosh sums = y + p*i; 40949bd79ccSDebojyoti Ghosh for (j=0; j<n; j++) { 41049bd79ccSDebojyoti Ghosh for (k=0; k<p; k++) { 41149bd79ccSDebojyoti Ghosh sums[k] += v[jrow+j]*x[q*idx[jrow+j]+k]; 41249bd79ccSDebojyoti Ghosh } 41349bd79ccSDebojyoti Ghosh } 41449bd79ccSDebojyoti Ghosh } 41549bd79ccSDebojyoti Ghosh } else if (t) { 41649bd79ccSDebojyoti Ghosh for (i=0; i<m; i++) { 41749bd79ccSDebojyoti Ghosh jrow = ii[i]; 41849bd79ccSDebojyoti Ghosh n = ii[i+1] - jrow; 41949bd79ccSDebojyoti Ghosh sums = y + p*i; 42049bd79ccSDebojyoti Ghosh bx = x + q*i; 42149bd79ccSDebojyoti Ghosh for (j=0; j<n; j++) { 42249bd79ccSDebojyoti Ghosh for (k=0; k<p; k++) { 42349bd79ccSDebojyoti Ghosh for (l=0; l<q; l++) { 42449bd79ccSDebojyoti Ghosh sums[k] += v[jrow+j]*t[k+l*p]*x[q*idx[jrow+j]+l]; 42549bd79ccSDebojyoti Ghosh } 42649bd79ccSDebojyoti Ghosh } 42749bd79ccSDebojyoti Ghosh } 42849bd79ccSDebojyoti Ghosh } 42949bd79ccSDebojyoti Ghosh } 43049bd79ccSDebojyoti Ghosh if (s) { 43149bd79ccSDebojyoti Ghosh for (i=0; i<m; i++) { 43249bd79ccSDebojyoti Ghosh jrow = ii[i]; 43349bd79ccSDebojyoti Ghosh n = ii[i+1] - jrow; 43449bd79ccSDebojyoti Ghosh sums = y + p*i; 43549bd79ccSDebojyoti Ghosh bx = x + q*i; 43649bd79ccSDebojyoti Ghosh if (i < b->AIJ->cmap->n) { 43749bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 43849bd79ccSDebojyoti Ghosh for (k=0; k<p; k++) { 43949bd79ccSDebojyoti Ghosh sums[k] += s[k+j*p]*bx[j]; 44049bd79ccSDebojyoti Ghosh } 44149bd79ccSDebojyoti Ghosh } 44249bd79ccSDebojyoti Ghosh } 44349bd79ccSDebojyoti Ghosh } 44449bd79ccSDebojyoti Ghosh } 44549bd79ccSDebojyoti Ghosh 44649bd79ccSDebojyoti Ghosh ierr = PetscLogFlops((2.0*p*q-p)*m+2*p*a->nz);CHKERRQ(ierr); 44749bd79ccSDebojyoti Ghosh ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 44849bd79ccSDebojyoti Ghosh ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 44949bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 45049bd79ccSDebojyoti Ghosh } 45149bd79ccSDebojyoti Ghosh 45249bd79ccSDebojyoti Ghosh PetscErrorCode MatMult_SeqKAIJ_N(Mat A,Vec xx,Vec yy) 45349bd79ccSDebojyoti Ghosh { 45449bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 45549bd79ccSDebojyoti Ghosh PetscFunctionBegin; 45649bd79ccSDebojyoti Ghosh ierr = KAIJMultAdd_Seq(A,xx,PETSC_NULL,yy);CHKERRQ(ierr); 45749bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 45849bd79ccSDebojyoti Ghosh } 45949bd79ccSDebojyoti Ghosh 46049bd79ccSDebojyoti Ghosh PetscErrorCode MatMultAdd_SeqKAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 46149bd79ccSDebojyoti Ghosh { 46249bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 46349bd79ccSDebojyoti Ghosh PetscFunctionBegin; 46449bd79ccSDebojyoti Ghosh ierr = KAIJMultAdd_Seq(A,xx,yy,zz);CHKERRQ(ierr); 46549bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 46649bd79ccSDebojyoti Ghosh } 46749bd79ccSDebojyoti Ghosh 46849bd79ccSDebojyoti Ghosh #include <petsc/private/kernels/blockinvert.h> 46949bd79ccSDebojyoti Ghosh 47049bd79ccSDebojyoti Ghosh PetscErrorCode MatInvertBlockDiagonal_SeqKAIJ_N(Mat A,const PetscScalar **values) 47149bd79ccSDebojyoti Ghosh { 47249bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *b = (Mat_SeqKAIJ*)A->data; 47349bd79ccSDebojyoti Ghosh Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 47449bd79ccSDebojyoti Ghosh const PetscScalar *S = b->S; 47549bd79ccSDebojyoti Ghosh const PetscScalar *T = b->T; 47649bd79ccSDebojyoti Ghosh const PetscScalar *v = a->a; 47749bd79ccSDebojyoti Ghosh const PetscInt p = b->p, q = b->q, m = b->AIJ->rmap->n, *idx = a->j, *ii = a->i; 47849bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 47949bd79ccSDebojyoti Ghosh PetscInt i,j,*v_pivots,dof,dof2; 48049bd79ccSDebojyoti Ghosh PetscScalar *diag,aval,*v_work; 48149bd79ccSDebojyoti Ghosh 48249bd79ccSDebojyoti Ghosh PetscFunctionBegin; 48349bd79ccSDebojyoti Ghosh if (p != q) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MATKAIJ: Block size must be square to calculate inverse."); 48431a97b9aSRichard Tran Mills if ((!S) && (!T) && (!b->isTI)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MATKAIJ: Cannot invert a zero matrix."); 48549bd79ccSDebojyoti Ghosh 48649bd79ccSDebojyoti Ghosh dof = p; 48749bd79ccSDebojyoti Ghosh dof2 = dof*dof; 48849bd79ccSDebojyoti Ghosh 48949bd79ccSDebojyoti Ghosh if (b->ibdiagvalid) { 49049bd79ccSDebojyoti Ghosh if (values) *values = b->ibdiag; 49149bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 49249bd79ccSDebojyoti Ghosh } 49349bd79ccSDebojyoti Ghosh if (!b->ibdiag) { 49449bd79ccSDebojyoti Ghosh ierr = PetscMalloc(dof2*m*sizeof(PetscScalar),&b->ibdiag);CHKERRQ(ierr); 49549bd79ccSDebojyoti Ghosh ierr = PetscLogObjectMemory((PetscObject)A,dof2*m*sizeof(PetscScalar));CHKERRQ(ierr); 49649bd79ccSDebojyoti Ghosh } 49749bd79ccSDebojyoti Ghosh if (values) *values = b->ibdiag; 49849bd79ccSDebojyoti Ghosh diag = b->ibdiag; 49949bd79ccSDebojyoti Ghosh 50049bd79ccSDebojyoti Ghosh ierr = PetscMalloc2(dof,&v_work,dof,&v_pivots);CHKERRQ(ierr); 50149bd79ccSDebojyoti Ghosh for (i=0; i<m; i++) { 50249bd79ccSDebojyoti Ghosh if (S) { 50349bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(diag,S,dof2*sizeof(PetscScalar));CHKERRQ(ierr); 50449bd79ccSDebojyoti Ghosh } else { 50549bd79ccSDebojyoti Ghosh ierr = PetscMemzero(diag,dof2*sizeof(PetscScalar));CHKERRQ(ierr); 50649bd79ccSDebojyoti Ghosh } 50749bd79ccSDebojyoti Ghosh if (b->isTI) { 50849bd79ccSDebojyoti Ghosh aval = 0; 50949bd79ccSDebojyoti Ghosh for (j=ii[i]; j<ii[i+1]; j++) if (idx[j] == i) aval = v[j]; 51049bd79ccSDebojyoti Ghosh for (j=0; j<dof; j++) diag[j+dof*j] += aval; 51149bd79ccSDebojyoti Ghosh } else if (T) { 51249bd79ccSDebojyoti Ghosh aval = 0; 51349bd79ccSDebojyoti Ghosh for (j=ii[i]; j<ii[i+1]; j++) if (idx[j] == i) aval = v[j]; 51449bd79ccSDebojyoti Ghosh for (j=0; j<dof2; j++) diag[j] += aval*T[j]; 51549bd79ccSDebojyoti Ghosh } 51649bd79ccSDebojyoti Ghosh ierr = PetscKernel_A_gets_inverse_A(dof,diag,v_pivots,v_work,PETSC_FALSE,NULL);CHKERRQ(ierr); 51749bd79ccSDebojyoti Ghosh diag += dof2; 51849bd79ccSDebojyoti Ghosh } 51949bd79ccSDebojyoti Ghosh ierr = PetscFree2(v_work,v_pivots);CHKERRQ(ierr); 52049bd79ccSDebojyoti Ghosh 52149bd79ccSDebojyoti Ghosh b->ibdiagvalid = PETSC_TRUE; 52249bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 52349bd79ccSDebojyoti Ghosh } 52449bd79ccSDebojyoti Ghosh 52549bd79ccSDebojyoti Ghosh static PetscErrorCode MatGetDiagonalBlock_MPIKAIJ(Mat A,Mat *B) 52649bd79ccSDebojyoti Ghosh { 52749bd79ccSDebojyoti Ghosh Mat_MPIKAIJ *kaij = (Mat_MPIKAIJ*) A->data; 52849bd79ccSDebojyoti Ghosh 52949bd79ccSDebojyoti Ghosh PetscFunctionBegin; 53049bd79ccSDebojyoti Ghosh *B = kaij->AIJ; 53149bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 53249bd79ccSDebojyoti Ghosh } 53349bd79ccSDebojyoti Ghosh 53449bd79ccSDebojyoti Ghosh PetscErrorCode MatSOR_SeqKAIJ(Mat A,Vec bb,PetscReal omega,MatSORType flag,PetscReal fshift,PetscInt its,PetscInt lits,Vec xx) 53549bd79ccSDebojyoti Ghosh { 53649bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 53749bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *kaij = (Mat_SeqKAIJ*) A->data; 53849bd79ccSDebojyoti Ghosh Mat_SeqAIJ *a = (Mat_SeqAIJ*)kaij->AIJ->data; 53949bd79ccSDebojyoti Ghosh const PetscScalar *aa = a->a, *T = kaij->T, *v; 54049bd79ccSDebojyoti Ghosh const PetscInt m = kaij->AIJ->rmap->n, *ai=a->i, *aj=a->j, p = kaij->p, q = kaij->q, *diag, *vi; 54149bd79ccSDebojyoti Ghosh const PetscScalar *b, *xb, *idiag; 54249bd79ccSDebojyoti Ghosh PetscScalar *x, *work, *workt, *w, *y, *arr, *t, *arrt; 54349bd79ccSDebojyoti Ghosh PetscInt i, j, k, i2, bs, bs2, nz; 54449bd79ccSDebojyoti Ghosh 54549bd79ccSDebojyoti Ghosh PetscFunctionBegin; 54649bd79ccSDebojyoti Ghosh its = its*lits; 54749bd79ccSDebojyoti Ghosh if (flag & SOR_EISENSTAT) SETERRQ (PETSC_COMM_SELF,PETSC_ERR_SUP,"No support yet for Eisenstat"); 54849bd79ccSDebojyoti Ghosh if (its <= 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Relaxation requires global its %D and local its %D both positive",its,lits); 54949bd79ccSDebojyoti Ghosh if (fshift) SETERRQ (PETSC_COMM_SELF,PETSC_ERR_SUP,"Sorry, no support for diagonal shift"); 55031a97b9aSRichard Tran Mills if ((flag & SOR_APPLY_UPPER) || (flag & SOR_APPLY_LOWER)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Sorry, no support for applying upper or lower triangular parts"); 55149bd79ccSDebojyoti Ghosh if (p != q) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MatSOR for KAIJ: Sorry, no support for non-square dense blocks"); 55249bd79ccSDebojyoti Ghosh else {bs = p; bs2 = bs*bs; } 55349bd79ccSDebojyoti Ghosh 55449bd79ccSDebojyoti Ghosh if (!m) PetscFunctionReturn(0); 55549bd79ccSDebojyoti Ghosh 55649bd79ccSDebojyoti Ghosh if (!kaij->ibdiagvalid) { ierr = MatInvertBlockDiagonal_SeqKAIJ_N(A,NULL);CHKERRQ(ierr); } 55749bd79ccSDebojyoti Ghosh idiag = kaij->ibdiag; 55849bd79ccSDebojyoti Ghosh diag = a->diag; 55949bd79ccSDebojyoti Ghosh 56049bd79ccSDebojyoti Ghosh if (!kaij->sor.setup) { 56149bd79ccSDebojyoti Ghosh ierr = PetscMalloc5(bs,&kaij->sor.w,bs,&kaij->sor.y,m*bs,&kaij->sor.work,m*bs,&kaij->sor.t,m*bs2,&kaij->sor.arr);CHKERRQ(ierr); 56249bd79ccSDebojyoti Ghosh kaij->sor.setup = PETSC_TRUE; 56349bd79ccSDebojyoti Ghosh } 56449bd79ccSDebojyoti Ghosh y = kaij->sor.y; 56549bd79ccSDebojyoti Ghosh w = kaij->sor.w; 56649bd79ccSDebojyoti Ghosh work = kaij->sor.work; 56749bd79ccSDebojyoti Ghosh t = kaij->sor.t; 56849bd79ccSDebojyoti Ghosh arr = kaij->sor.arr; 56949bd79ccSDebojyoti Ghosh 57049bd79ccSDebojyoti Ghosh ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 57149bd79ccSDebojyoti Ghosh ierr = VecGetArrayRead(bb,&b);CHKERRQ(ierr); 57249bd79ccSDebojyoti Ghosh 57349bd79ccSDebojyoti Ghosh if (flag & SOR_ZERO_INITIAL_GUESS) { 57449bd79ccSDebojyoti Ghosh if (flag & SOR_FORWARD_SWEEP || flag & SOR_LOCAL_FORWARD_SWEEP) { 57549bd79ccSDebojyoti Ghosh PetscKernel_w_gets_Ar_times_v(bs,bs,b,idiag,x); /* x[0:bs] <- D^{-1} b[0:bs] */ 57649bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(t,b,bs*sizeof(PetscScalar));CHKERRQ(ierr); 57749bd79ccSDebojyoti Ghosh i2 = bs; 57849bd79ccSDebojyoti Ghosh idiag += bs2; 57949bd79ccSDebojyoti Ghosh for (i=1; i<m; i++) { 58049bd79ccSDebojyoti Ghosh v = aa + ai[i]; 58149bd79ccSDebojyoti Ghosh vi = aj + ai[i]; 58249bd79ccSDebojyoti Ghosh nz = diag[i] - ai[i]; 58349bd79ccSDebojyoti Ghosh 58449bd79ccSDebojyoti Ghosh if (T) { /* b - T (Arow * x) */ 58549bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) w[k] = 0; 58649bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 58749bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) w[k] -= v[j] * x[vi[j]*bs+k]; 58849bd79ccSDebojyoti Ghosh } 58949bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs,w,T,&t[i2]); 59049bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) t[i2+k] += b[i2+k]; 59149bd79ccSDebojyoti Ghosh } else if (kaij->isTI) { 59249bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) t[i2+k] = b[i2+k]; 59349bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 59449bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) t[i2+k] -= v[j] * x[vi[j]*bs+k]; 59549bd79ccSDebojyoti Ghosh } 59649bd79ccSDebojyoti Ghosh } else { 59749bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) t[i2+k] = b[i2+k]; 59849bd79ccSDebojyoti Ghosh } 59949bd79ccSDebojyoti Ghosh 60049bd79ccSDebojyoti Ghosh PetscKernel_w_gets_Ar_times_v(bs,bs,t+i2,idiag,y); 60149bd79ccSDebojyoti Ghosh for (j=0; j<bs; j++) x[i2+j] = omega * y[j]; 60249bd79ccSDebojyoti Ghosh 60349bd79ccSDebojyoti Ghosh idiag += bs2; 60449bd79ccSDebojyoti Ghosh i2 += bs; 60549bd79ccSDebojyoti Ghosh } 60649bd79ccSDebojyoti Ghosh /* for logging purposes assume number of nonzero in lower half is 1/2 of total */ 60749bd79ccSDebojyoti Ghosh ierr = PetscLogFlops(1.0*bs2*a->nz);CHKERRQ(ierr); 60849bd79ccSDebojyoti Ghosh xb = t; 60949bd79ccSDebojyoti Ghosh } else xb = b; 61049bd79ccSDebojyoti Ghosh if (flag & SOR_BACKWARD_SWEEP || flag & SOR_LOCAL_BACKWARD_SWEEP) { 61149bd79ccSDebojyoti Ghosh idiag = kaij->ibdiag+bs2*(m-1); 61249bd79ccSDebojyoti Ghosh i2 = bs * (m-1); 61349bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(w,xb+i2,bs*sizeof(PetscScalar));CHKERRQ(ierr); 61449bd79ccSDebojyoti Ghosh PetscKernel_w_gets_Ar_times_v(bs,bs,w,idiag,x+i2); 61549bd79ccSDebojyoti Ghosh i2 -= bs; 61649bd79ccSDebojyoti Ghosh idiag -= bs2; 61749bd79ccSDebojyoti Ghosh for (i=m-2; i>=0; i--) { 61849bd79ccSDebojyoti Ghosh v = aa + diag[i] + 1 ; 61949bd79ccSDebojyoti Ghosh vi = aj + diag[i] + 1; 62049bd79ccSDebojyoti Ghosh nz = ai[i+1] - diag[i] - 1; 62149bd79ccSDebojyoti Ghosh 62249bd79ccSDebojyoti Ghosh if (T) { /* FIXME: This branch untested */ 62349bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(w,xb+i2,bs*sizeof(PetscScalar));CHKERRQ(ierr); 62449bd79ccSDebojyoti Ghosh /* copy all rows of x that are needed into contiguous space */ 62549bd79ccSDebojyoti Ghosh workt = work; 62649bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 62749bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(workt,x + bs*(*vi++),bs*sizeof(PetscScalar));CHKERRQ(ierr); 62849bd79ccSDebojyoti Ghosh workt += bs; 62949bd79ccSDebojyoti Ghosh } 63049bd79ccSDebojyoti Ghosh arrt = arr; 63149bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 63249bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(arrt,T,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 63349bd79ccSDebojyoti Ghosh for (k=0; k<bs2; k++) arrt[k] *= v[j]; 63449bd79ccSDebojyoti Ghosh arrt += bs2; 63549bd79ccSDebojyoti Ghosh } 63649bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 63749bd79ccSDebojyoti Ghosh } else if (kaij->isTI) { 63849bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) w[k] = t[i2+k]; 63949bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 64049bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) w[k] -= v[j] * x[vi[j]*bs+k]; 64149bd79ccSDebojyoti Ghosh } 64249bd79ccSDebojyoti Ghosh } 64349bd79ccSDebojyoti Ghosh 64449bd79ccSDebojyoti Ghosh PetscKernel_w_gets_Ar_times_v(bs,bs,w,idiag,y); /* RHS incorrect for omega != 1.0 */ 64549bd79ccSDebojyoti Ghosh for (j=0; j<bs; j++) x[i2+j] = (1.0-omega) * x[i2+j] + omega * y[j]; 64649bd79ccSDebojyoti Ghosh 64749bd79ccSDebojyoti Ghosh idiag -= bs2; 64849bd79ccSDebojyoti Ghosh i2 -= bs; 64949bd79ccSDebojyoti Ghosh } 65049bd79ccSDebojyoti Ghosh ierr = PetscLogFlops(1.0*bs2*(a->nz));CHKERRQ(ierr); 65149bd79ccSDebojyoti Ghosh } 65249bd79ccSDebojyoti Ghosh its--; 65349bd79ccSDebojyoti Ghosh } 65449bd79ccSDebojyoti Ghosh while (its--) { /* FIXME: This branch not updated */ 65549bd79ccSDebojyoti Ghosh if (flag & SOR_FORWARD_SWEEP || flag & SOR_LOCAL_FORWARD_SWEEP) { 65649bd79ccSDebojyoti Ghosh i2 = 0; 65749bd79ccSDebojyoti Ghosh idiag = kaij->ibdiag; 65849bd79ccSDebojyoti Ghosh for (i=0; i<m; i++) { 65949bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(w,b+i2,bs*sizeof(PetscScalar));CHKERRQ(ierr); 66049bd79ccSDebojyoti Ghosh 66149bd79ccSDebojyoti Ghosh v = aa + ai[i]; 66249bd79ccSDebojyoti Ghosh vi = aj + ai[i]; 66349bd79ccSDebojyoti Ghosh nz = diag[i] - ai[i]; 66449bd79ccSDebojyoti Ghosh workt = work; 66549bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 66649bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(workt,x + bs*(*vi++),bs*sizeof(PetscScalar));CHKERRQ(ierr); 66749bd79ccSDebojyoti Ghosh workt += bs; 66849bd79ccSDebojyoti Ghosh } 66949bd79ccSDebojyoti Ghosh arrt = arr; 67049bd79ccSDebojyoti Ghosh if (T) { 67149bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 67249bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(arrt,T,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 67349bd79ccSDebojyoti Ghosh for (k=0; k<bs2; k++) arrt[k] *= v[j]; 67449bd79ccSDebojyoti Ghosh arrt += bs2; 67549bd79ccSDebojyoti Ghosh } 67649bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 67749bd79ccSDebojyoti Ghosh } else if (kaij->isTI) { 67849bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 67949bd79ccSDebojyoti Ghosh ierr = PetscMemzero(arrt,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 68049bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) arrt[k+bs*k] = v[j]; 68149bd79ccSDebojyoti Ghosh arrt += bs2; 68249bd79ccSDebojyoti Ghosh } 68349bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 68449bd79ccSDebojyoti Ghosh } 68549bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(t+i2,w,bs*sizeof(PetscScalar));CHKERRQ(ierr); 68649bd79ccSDebojyoti Ghosh 68749bd79ccSDebojyoti Ghosh v = aa + diag[i] + 1; 68849bd79ccSDebojyoti Ghosh vi = aj + diag[i] + 1; 68949bd79ccSDebojyoti Ghosh nz = ai[i+1] - diag[i] - 1; 69049bd79ccSDebojyoti Ghosh workt = work; 69149bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 69249bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(workt,x + bs*(*vi++),bs*sizeof(PetscScalar));CHKERRQ(ierr); 69349bd79ccSDebojyoti Ghosh workt += bs; 69449bd79ccSDebojyoti Ghosh } 69549bd79ccSDebojyoti Ghosh arrt = arr; 69649bd79ccSDebojyoti Ghosh if (T) { 69749bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 69849bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(arrt,T,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 69949bd79ccSDebojyoti Ghosh for (k=0; k<bs2; k++) arrt[k] *= v[j]; 70049bd79ccSDebojyoti Ghosh arrt += bs2; 70149bd79ccSDebojyoti Ghosh } 70249bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 70349bd79ccSDebojyoti Ghosh } else if (kaij->isTI) { 70449bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 70549bd79ccSDebojyoti Ghosh ierr = PetscMemzero(arrt,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 70649bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) arrt[k+bs*k] = v[j]; 70749bd79ccSDebojyoti Ghosh arrt += bs2; 70849bd79ccSDebojyoti Ghosh } 70949bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 71049bd79ccSDebojyoti Ghosh } 71149bd79ccSDebojyoti Ghosh 71249bd79ccSDebojyoti Ghosh PetscKernel_w_gets_Ar_times_v(bs,bs,w,idiag,y); 71349bd79ccSDebojyoti Ghosh for (j=0; j<bs; j++) *(x+i2+j) = (1.0-omega) * *(x+i2+j) + omega * *(y+j); 71449bd79ccSDebojyoti Ghosh 71549bd79ccSDebojyoti Ghosh idiag += bs2; 71649bd79ccSDebojyoti Ghosh i2 += bs; 71749bd79ccSDebojyoti Ghosh } 71849bd79ccSDebojyoti Ghosh xb = t; 71949bd79ccSDebojyoti Ghosh } 72049bd79ccSDebojyoti Ghosh else xb = b; 72149bd79ccSDebojyoti Ghosh if (flag & SOR_BACKWARD_SWEEP || flag & SOR_LOCAL_BACKWARD_SWEEP) { 72249bd79ccSDebojyoti Ghosh idiag = kaij->ibdiag+bs2*(m-1); 72349bd79ccSDebojyoti Ghosh i2 = bs * (m-1); 72449bd79ccSDebojyoti Ghosh if (xb == b) { 72549bd79ccSDebojyoti Ghosh for (i=m-1; i>=0; i--) { 72649bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(w,b+i2,bs*sizeof(PetscScalar));CHKERRQ(ierr); 72749bd79ccSDebojyoti Ghosh 72849bd79ccSDebojyoti Ghosh v = aa + ai[i]; 72949bd79ccSDebojyoti Ghosh vi = aj + ai[i]; 73049bd79ccSDebojyoti Ghosh nz = diag[i] - ai[i]; 73149bd79ccSDebojyoti Ghosh workt = work; 73249bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 73349bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(workt,x + bs*(*vi++),bs*sizeof(PetscScalar));CHKERRQ(ierr); 73449bd79ccSDebojyoti Ghosh workt += bs; 73549bd79ccSDebojyoti Ghosh } 73649bd79ccSDebojyoti Ghosh arrt = arr; 73749bd79ccSDebojyoti Ghosh if (T) { 73849bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 73949bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(arrt,T,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 74049bd79ccSDebojyoti Ghosh for (k=0; k<bs2; k++) arrt[k] *= v[j]; 74149bd79ccSDebojyoti Ghosh arrt += bs2; 74249bd79ccSDebojyoti Ghosh } 74349bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 74449bd79ccSDebojyoti Ghosh } else if (kaij->isTI) { 74549bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 74649bd79ccSDebojyoti Ghosh ierr = PetscMemzero(arrt,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 74749bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) arrt[k+bs*k] = v[j]; 74849bd79ccSDebojyoti Ghosh arrt += bs2; 74949bd79ccSDebojyoti Ghosh } 75049bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 75149bd79ccSDebojyoti Ghosh } 75249bd79ccSDebojyoti Ghosh 75349bd79ccSDebojyoti Ghosh v = aa + diag[i] + 1; 75449bd79ccSDebojyoti Ghosh vi = aj + diag[i] + 1; 75549bd79ccSDebojyoti Ghosh nz = ai[i+1] - diag[i] - 1; 75649bd79ccSDebojyoti Ghosh workt = work; 75749bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 75849bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(workt,x + bs*(*vi++),bs*sizeof(PetscScalar));CHKERRQ(ierr); 75949bd79ccSDebojyoti Ghosh workt += bs; 76049bd79ccSDebojyoti Ghosh } 76149bd79ccSDebojyoti Ghosh arrt = arr; 76249bd79ccSDebojyoti Ghosh if (T) { 76349bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 76449bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(arrt,T,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 76549bd79ccSDebojyoti Ghosh for (k=0; k<bs2; k++) arrt[k] *= v[j]; 76649bd79ccSDebojyoti Ghosh arrt += bs2; 76749bd79ccSDebojyoti Ghosh } 76849bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 76949bd79ccSDebojyoti Ghosh } else if (kaij->isTI) { 77049bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 77149bd79ccSDebojyoti Ghosh ierr = PetscMemzero(arrt,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 77249bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) arrt[k+bs*k] = v[j]; 77349bd79ccSDebojyoti Ghosh arrt += bs2; 77449bd79ccSDebojyoti Ghosh } 77549bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 77649bd79ccSDebojyoti Ghosh } 77749bd79ccSDebojyoti Ghosh 77849bd79ccSDebojyoti Ghosh PetscKernel_w_gets_Ar_times_v(bs,bs,w,idiag,y); 77949bd79ccSDebojyoti Ghosh for (j=0; j<bs; j++) *(x+i2+j) = (1.0-omega) * *(x+i2+j) + omega * *(y+j); 78049bd79ccSDebojyoti Ghosh } 78149bd79ccSDebojyoti Ghosh } else { 78249bd79ccSDebojyoti Ghosh for (i=m-1; i>=0; i--) { 78349bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(w,xb+i2,bs*sizeof(PetscScalar));CHKERRQ(ierr); 78449bd79ccSDebojyoti Ghosh v = aa + diag[i] + 1; 78549bd79ccSDebojyoti Ghosh vi = aj + diag[i] + 1; 78649bd79ccSDebojyoti Ghosh nz = ai[i+1] - diag[i] - 1; 78749bd79ccSDebojyoti Ghosh workt = work; 78849bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 78949bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(workt,x + bs*(*vi++),bs*sizeof(PetscScalar));CHKERRQ(ierr); 79049bd79ccSDebojyoti Ghosh workt += bs; 79149bd79ccSDebojyoti Ghosh } 79249bd79ccSDebojyoti Ghosh arrt = arr; 79349bd79ccSDebojyoti Ghosh if (T) { 79449bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 79549bd79ccSDebojyoti Ghosh ierr = PetscMemcpy(arrt,T,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 79649bd79ccSDebojyoti Ghosh for (k=0; k<bs2; k++) arrt[k] *= v[j]; 79749bd79ccSDebojyoti Ghosh arrt += bs2; 79849bd79ccSDebojyoti Ghosh } 79949bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 80049bd79ccSDebojyoti Ghosh } else if (kaij->isTI) { 80149bd79ccSDebojyoti Ghosh for (j=0; j<nz; j++) { 80249bd79ccSDebojyoti Ghosh ierr = PetscMemzero(arrt,bs2*sizeof(PetscScalar));CHKERRQ(ierr); 80349bd79ccSDebojyoti Ghosh for (k=0; k<bs; k++) arrt[k+bs*k] = v[j]; 80449bd79ccSDebojyoti Ghosh arrt += bs2; 80549bd79ccSDebojyoti Ghosh } 80649bd79ccSDebojyoti Ghosh PetscKernel_w_gets_w_minus_Ar_times_v(bs,bs*nz,w,arr,work); 80749bd79ccSDebojyoti Ghosh } 80849bd79ccSDebojyoti Ghosh PetscKernel_w_gets_Ar_times_v(bs,bs,w,idiag,y); 80949bd79ccSDebojyoti Ghosh for (j=0; j<bs; j++) *(x+i2+j) = (1.0-omega) * *(x+i2+j) + omega * *(y+j); 81049bd79ccSDebojyoti Ghosh } 81149bd79ccSDebojyoti Ghosh idiag -= bs2; 81249bd79ccSDebojyoti Ghosh i2 -= bs; 81349bd79ccSDebojyoti Ghosh } 81449bd79ccSDebojyoti Ghosh ierr = PetscLogFlops(1.0*bs2*(a->nz));CHKERRQ(ierr); 81549bd79ccSDebojyoti Ghosh } 81649bd79ccSDebojyoti Ghosh } 81749bd79ccSDebojyoti Ghosh 81849bd79ccSDebojyoti Ghosh ierr = VecRestoreArray(xx,&x); CHKERRQ(ierr); 81949bd79ccSDebojyoti Ghosh ierr = VecRestoreArrayRead(bb,&b);CHKERRQ(ierr); 82049bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 82149bd79ccSDebojyoti Ghosh } 82249bd79ccSDebojyoti Ghosh 82349bd79ccSDebojyoti Ghosh /*===================================================================================*/ 82449bd79ccSDebojyoti Ghosh 82549bd79ccSDebojyoti Ghosh PetscErrorCode KAIJMultAdd_MPI(Mat A,Vec xx,Vec yy,Vec zz) 82649bd79ccSDebojyoti Ghosh { 82749bd79ccSDebojyoti Ghosh Mat_MPIKAIJ *b = (Mat_MPIKAIJ*)A->data; 82849bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 82949bd79ccSDebojyoti Ghosh 83049bd79ccSDebojyoti Ghosh PetscFunctionBegin; 83149bd79ccSDebojyoti Ghosh if (!yy) { 83249bd79ccSDebojyoti Ghosh ierr = VecSet(zz,0.0);CHKERRQ(ierr); 83349bd79ccSDebojyoti Ghosh } else { 83449bd79ccSDebojyoti Ghosh ierr = VecCopy(yy,zz);CHKERRQ(ierr); 83549bd79ccSDebojyoti Ghosh } 83649bd79ccSDebojyoti Ghosh /* start the scatter */ 83749bd79ccSDebojyoti Ghosh ierr = VecScatterBegin(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 83849bd79ccSDebojyoti Ghosh ierr = (*b->AIJ->ops->multadd)(b->AIJ,xx,zz,zz);CHKERRQ(ierr); 83949bd79ccSDebojyoti Ghosh ierr = VecScatterEnd(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 84049bd79ccSDebojyoti Ghosh ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,zz,zz);CHKERRQ(ierr); 84149bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 84249bd79ccSDebojyoti Ghosh } 84349bd79ccSDebojyoti Ghosh 84449bd79ccSDebojyoti Ghosh PetscErrorCode MatMult_MPIKAIJ_dof(Mat A,Vec xx,Vec yy) 84549bd79ccSDebojyoti Ghosh { 84649bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 84749bd79ccSDebojyoti Ghosh PetscFunctionBegin; 84849bd79ccSDebojyoti Ghosh ierr = KAIJMultAdd_MPI(A,xx,PETSC_NULL,yy);CHKERRQ(ierr); 84949bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 85049bd79ccSDebojyoti Ghosh } 85149bd79ccSDebojyoti Ghosh 85249bd79ccSDebojyoti Ghosh PetscErrorCode MatMultAdd_MPIKAIJ_dof(Mat A,Vec xx,Vec yy, Vec zz) 85349bd79ccSDebojyoti Ghosh { 85449bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 85549bd79ccSDebojyoti Ghosh PetscFunctionBegin; 85649bd79ccSDebojyoti Ghosh ierr = KAIJMultAdd_MPI(A,xx,yy,zz);CHKERRQ(ierr); 85749bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 85849bd79ccSDebojyoti Ghosh } 85949bd79ccSDebojyoti Ghosh 86049bd79ccSDebojyoti Ghosh PetscErrorCode MatInvertBlockDiagonal_MPIKAIJ_dof(Mat A,const PetscScalar **values) 86149bd79ccSDebojyoti Ghosh { 86249bd79ccSDebojyoti Ghosh Mat_MPIKAIJ *b = (Mat_MPIKAIJ*)A->data; 86349bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 86449bd79ccSDebojyoti Ghosh 86549bd79ccSDebojyoti Ghosh PetscFunctionBegin; 86649bd79ccSDebojyoti Ghosh ierr = (*b->AIJ->ops->invertblockdiagonal)(b->AIJ,values);CHKERRQ(ierr); 86749bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 86849bd79ccSDebojyoti Ghosh } 86949bd79ccSDebojyoti Ghosh 87049bd79ccSDebojyoti Ghosh /* ----------------------------------------------------------------*/ 87149bd79ccSDebojyoti Ghosh 87249bd79ccSDebojyoti Ghosh PetscErrorCode MatGetRow_SeqKAIJ(Mat A,PetscInt row,PetscInt *ncols,PetscInt **cols,PetscScalar **values) 87349bd79ccSDebojyoti Ghosh { 87449bd79ccSDebojyoti Ghosh Mat_SeqKAIJ *b = (Mat_SeqKAIJ*) A->data; 875*1ca5ffdbSRichard Tran Mills PetscErrorCode diag = PETSC_FALSE; 876*1ca5ffdbSRichard Tran Mills PetscErrorCode ierr; 87749bd79ccSDebojyoti Ghosh PetscInt nzaij,nz,*colsaij,*idx,i,j,p=b->p,q=b->q,r=row/p,s=row%p,c; 87849bd79ccSDebojyoti Ghosh PetscScalar *vaij,*v,*S=b->S,*T=b->T; 87949bd79ccSDebojyoti Ghosh 88049bd79ccSDebojyoti Ghosh PetscFunctionBegin; 88149bd79ccSDebojyoti Ghosh if (b->getrowactive) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Already active"); 88249bd79ccSDebojyoti Ghosh b->getrowactive = PETSC_TRUE; 88349bd79ccSDebojyoti Ghosh if (row < 0 || row >= A->rmap->n) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row %D out of range",row); 88449bd79ccSDebojyoti Ghosh 88549bd79ccSDebojyoti Ghosh if ((!S) && (!T) && (!b->isTI)) { 88649bd79ccSDebojyoti Ghosh if (ncols) *ncols = 0; 88749bd79ccSDebojyoti Ghosh if (cols) *cols = NULL; 88849bd79ccSDebojyoti Ghosh if (values) *values = NULL; 88949bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 89049bd79ccSDebojyoti Ghosh } 89149bd79ccSDebojyoti Ghosh 89249bd79ccSDebojyoti Ghosh if (T || b->isTI) { 89349bd79ccSDebojyoti Ghosh ierr = MatGetRow_SeqAIJ(b->AIJ,r,&nzaij,&colsaij,&vaij);CHKERRQ(ierr); 89449bd79ccSDebojyoti Ghosh c = nzaij; 89549bd79ccSDebojyoti Ghosh for (i=0; i<nzaij; i++) { 89649bd79ccSDebojyoti Ghosh /* check if this row contains a diagonal entry */ 89749bd79ccSDebojyoti Ghosh if (colsaij[i] == r) { 89849bd79ccSDebojyoti Ghosh diag = PETSC_TRUE; 89949bd79ccSDebojyoti Ghosh c = i; 90049bd79ccSDebojyoti Ghosh } 90149bd79ccSDebojyoti Ghosh } 90249bd79ccSDebojyoti Ghosh } else nzaij = c = 0; 90349bd79ccSDebojyoti Ghosh 90449bd79ccSDebojyoti Ghosh /* calculate size of row */ 90549bd79ccSDebojyoti Ghosh nz = 0; 90649bd79ccSDebojyoti Ghosh if (S) nz += q; 90749bd79ccSDebojyoti Ghosh if (T || b->isTI) nz += (diag && S ? (nzaij-1)*q : nzaij*q); 90849bd79ccSDebojyoti Ghosh 90949bd79ccSDebojyoti Ghosh if (cols || values) { 91049bd79ccSDebojyoti Ghosh ierr = PetscMalloc2(nz,&idx,nz,&v);CHKERRQ(ierr); 91149bd79ccSDebojyoti Ghosh if (b->isTI) { 91249bd79ccSDebojyoti Ghosh for (i=0; i<nzaij; i++) { 91349bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 91449bd79ccSDebojyoti Ghosh idx[i*q+j] = colsaij[i]*q+j; 91549bd79ccSDebojyoti Ghosh v[i*q+j] = (j==s ? vaij[i] : 0); 91649bd79ccSDebojyoti Ghosh } 91749bd79ccSDebojyoti Ghosh } 91849bd79ccSDebojyoti Ghosh } else if (T) { 91949bd79ccSDebojyoti Ghosh for (i=0; i<nzaij; i++) { 92049bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 92149bd79ccSDebojyoti Ghosh idx[i*q+j] = colsaij[i]*q+j; 92249bd79ccSDebojyoti Ghosh v[i*q+j] = vaij[i]*T[s+j*p]; 92349bd79ccSDebojyoti Ghosh } 92449bd79ccSDebojyoti Ghosh } 92549bd79ccSDebojyoti Ghosh } 92649bd79ccSDebojyoti Ghosh if (S) { 92749bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 92849bd79ccSDebojyoti Ghosh idx[c*q+j] = r*q+j; 92949bd79ccSDebojyoti Ghosh v[c*q+j] += S[s+j*p]; 93049bd79ccSDebojyoti Ghosh } 93149bd79ccSDebojyoti Ghosh } 93249bd79ccSDebojyoti Ghosh } 93349bd79ccSDebojyoti Ghosh 93449bd79ccSDebojyoti Ghosh if (ncols) *ncols = nz; 93549bd79ccSDebojyoti Ghosh if (cols) *cols = idx; 93649bd79ccSDebojyoti Ghosh if (values) *values = v; 93749bd79ccSDebojyoti Ghosh 93849bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 93949bd79ccSDebojyoti Ghosh } 94049bd79ccSDebojyoti Ghosh 94149bd79ccSDebojyoti Ghosh PetscErrorCode MatRestoreRow_SeqKAIJ(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v) 94249bd79ccSDebojyoti Ghosh { 94349bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 94449bd79ccSDebojyoti Ghosh PetscFunctionBegin; 94549bd79ccSDebojyoti Ghosh ierr = PetscFree2(*idx,*v);CHKERRQ(ierr); 94649bd79ccSDebojyoti Ghosh ((Mat_SeqKAIJ*)A->data)->getrowactive = PETSC_FALSE; 94749bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 94849bd79ccSDebojyoti Ghosh } 94949bd79ccSDebojyoti Ghosh 95049bd79ccSDebojyoti Ghosh PetscErrorCode MatGetRow_MPIKAIJ(Mat A,PetscInt row,PetscInt *ncols,PetscInt **cols,PetscScalar **values) 95149bd79ccSDebojyoti Ghosh { 95249bd79ccSDebojyoti Ghosh Mat_MPIKAIJ *b = (Mat_MPIKAIJ*) A->data; 95349bd79ccSDebojyoti Ghosh Mat MatAIJ = ((Mat_SeqKAIJ*)b->AIJ->data)->AIJ; 95449bd79ccSDebojyoti Ghosh Mat MatOAIJ = ((Mat_SeqKAIJ*)b->OAIJ->data)->AIJ; 95549bd79ccSDebojyoti Ghosh Mat AIJ = b->A; 956fc64b2cfSRichard Tran Mills PetscBool diag = PETSC_FALSE; 95749bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 95849bd79ccSDebojyoti Ghosh const PetscInt rstart=A->rmap->rstart,rend=A->rmap->rend,p=b->p,q=b->q,*garray; 95949bd79ccSDebojyoti Ghosh PetscInt nz,*idx,ncolsaij,ncolsoaij,*colsaij,*colsoaij,r,s,c,i,j,lrow; 96049bd79ccSDebojyoti Ghosh PetscScalar *v,*vals,*ovals,*S=b->S,*T=b->T; 96149bd79ccSDebojyoti Ghosh 96249bd79ccSDebojyoti Ghosh PetscFunctionBegin; 96349bd79ccSDebojyoti Ghosh if (b->getrowactive) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Already active"); 96449bd79ccSDebojyoti Ghosh b->getrowactive = PETSC_TRUE; 96549bd79ccSDebojyoti Ghosh if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Only local rows"); 96649bd79ccSDebojyoti Ghosh lrow = row - rstart; 96749bd79ccSDebojyoti Ghosh 96849bd79ccSDebojyoti Ghosh if ((!S) && (!T) && (!b->isTI)) { 96949bd79ccSDebojyoti Ghosh if (ncols) *ncols = 0; 97049bd79ccSDebojyoti Ghosh if (cols) *cols = NULL; 97149bd79ccSDebojyoti Ghosh if (values) *values = NULL; 97249bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 97349bd79ccSDebojyoti Ghosh } 97449bd79ccSDebojyoti Ghosh 97549bd79ccSDebojyoti Ghosh r = lrow/p; 97649bd79ccSDebojyoti Ghosh s = lrow%p; 97749bd79ccSDebojyoti Ghosh 97849bd79ccSDebojyoti Ghosh if (T || b->isTI) { 97949bd79ccSDebojyoti Ghosh ierr = MatMPIAIJGetSeqAIJ(AIJ,NULL,NULL,&garray); 98049bd79ccSDebojyoti Ghosh ierr = MatGetRow_SeqAIJ(MatAIJ,lrow/p,&ncolsaij,&colsaij,&vals);CHKERRQ(ierr); 98149bd79ccSDebojyoti Ghosh ierr = MatGetRow_SeqAIJ(MatOAIJ,lrow/p,&ncolsoaij,&colsoaij,&ovals);CHKERRQ(ierr); 98249bd79ccSDebojyoti Ghosh 98349bd79ccSDebojyoti Ghosh c = ncolsaij + ncolsoaij; 98449bd79ccSDebojyoti Ghosh for (i=0; i<ncolsaij; i++) { 98549bd79ccSDebojyoti Ghosh /* check if this row contains a diagonal entry */ 98649bd79ccSDebojyoti Ghosh if (colsaij[i] == r) { 98749bd79ccSDebojyoti Ghosh diag = PETSC_TRUE; 98849bd79ccSDebojyoti Ghosh c = i; 98949bd79ccSDebojyoti Ghosh } 99049bd79ccSDebojyoti Ghosh } 99149bd79ccSDebojyoti Ghosh } else c = 0; 99249bd79ccSDebojyoti Ghosh 99349bd79ccSDebojyoti Ghosh /* calculate size of row */ 99449bd79ccSDebojyoti Ghosh nz = 0; 99549bd79ccSDebojyoti Ghosh if (S) nz += q; 99649bd79ccSDebojyoti Ghosh if (T || b->isTI) nz += (diag && S ? (ncolsaij+ncolsoaij-1)*q : (ncolsaij+ncolsoaij)*q); 99749bd79ccSDebojyoti Ghosh 99849bd79ccSDebojyoti Ghosh if (cols || values) { 99949bd79ccSDebojyoti Ghosh ierr = PetscMalloc2(nz,&idx,nz,&v);CHKERRQ(ierr); 100049bd79ccSDebojyoti Ghosh if (b->isTI) { 100149bd79ccSDebojyoti Ghosh for (i=0; i<ncolsaij; i++) { 100249bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 100349bd79ccSDebojyoti Ghosh idx[i*q+j] = (colsaij[i]+rstart/p)*q+j; 100449bd79ccSDebojyoti Ghosh v[i*q+j] = (j==s ? vals[i] : 0.0); 100549bd79ccSDebojyoti Ghosh } 100649bd79ccSDebojyoti Ghosh } 100749bd79ccSDebojyoti Ghosh for (i=0; i<ncolsoaij; i++) { 100849bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 100949bd79ccSDebojyoti Ghosh idx[(i+ncolsaij)*q+j] = garray[colsoaij[i]]*q+j; 101049bd79ccSDebojyoti Ghosh v[(i+ncolsaij)*q+j] = (j==s ? ovals[i]: 0.0); 101149bd79ccSDebojyoti Ghosh } 101249bd79ccSDebojyoti Ghosh } 101349bd79ccSDebojyoti Ghosh } else if (T) { 101449bd79ccSDebojyoti Ghosh for (i=0; i<ncolsaij; i++) { 101549bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 101649bd79ccSDebojyoti Ghosh idx[i*q+j] = (colsaij[i]+rstart/p)*q+j; 101749bd79ccSDebojyoti Ghosh v[i*q+j] = vals[i]*T[s+j*p]; 101849bd79ccSDebojyoti Ghosh } 101949bd79ccSDebojyoti Ghosh } 102049bd79ccSDebojyoti Ghosh for (i=0; i<ncolsoaij; i++) { 102149bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 102249bd79ccSDebojyoti Ghosh idx[(i+ncolsaij)*q+j] = garray[colsoaij[i]]*q+j; 102349bd79ccSDebojyoti Ghosh v[(i+ncolsaij)*q+j] = ovals[i]*T[s+j*p]; 102449bd79ccSDebojyoti Ghosh } 102549bd79ccSDebojyoti Ghosh } 102649bd79ccSDebojyoti Ghosh } 102749bd79ccSDebojyoti Ghosh if (S) { 102849bd79ccSDebojyoti Ghosh for (j=0; j<q; j++) { 102949bd79ccSDebojyoti Ghosh idx[c*q+j] = (r+rstart/p)*q+j; 103049bd79ccSDebojyoti Ghosh v[c*q+j] += S[s+j*p]; 103149bd79ccSDebojyoti Ghosh } 103249bd79ccSDebojyoti Ghosh } 103349bd79ccSDebojyoti Ghosh } 103449bd79ccSDebojyoti Ghosh 103549bd79ccSDebojyoti Ghosh if (ncols) *ncols = nz; 103649bd79ccSDebojyoti Ghosh if (cols) *cols = idx; 103749bd79ccSDebojyoti Ghosh if (values) *values = v; 103849bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 103949bd79ccSDebojyoti Ghosh } 104049bd79ccSDebojyoti Ghosh 104149bd79ccSDebojyoti Ghosh PetscErrorCode MatRestoreRow_MPIKAIJ(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v) 104249bd79ccSDebojyoti Ghosh { 104349bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 104449bd79ccSDebojyoti Ghosh PetscFunctionBegin; 104549bd79ccSDebojyoti Ghosh ierr = PetscFree2(*idx,*v);CHKERRQ(ierr); 104649bd79ccSDebojyoti Ghosh ((Mat_SeqKAIJ*)A->data)->getrowactive = PETSC_FALSE; 104749bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 104849bd79ccSDebojyoti Ghosh } 104949bd79ccSDebojyoti Ghosh 105049bd79ccSDebojyoti Ghosh PetscErrorCode MatCreateSubMatrix_KAIJ(Mat mat,IS isrow,IS iscol,MatReuse cll,Mat *newmat) 105149bd79ccSDebojyoti Ghosh { 105249bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 105349bd79ccSDebojyoti Ghosh Mat A; 105449bd79ccSDebojyoti Ghosh 105549bd79ccSDebojyoti Ghosh PetscFunctionBegin; 105649bd79ccSDebojyoti Ghosh ierr = MatConvert(mat,MATAIJ,MAT_INITIAL_MATRIX,&A);CHKERRQ(ierr); 105749bd79ccSDebojyoti Ghosh ierr = MatCreateSubMatrix(A,isrow,iscol,cll,newmat);CHKERRQ(ierr); 105849bd79ccSDebojyoti Ghosh ierr = MatDestroy(&A);CHKERRQ(ierr); 105949bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 106049bd79ccSDebojyoti Ghosh } 106149bd79ccSDebojyoti Ghosh 106249bd79ccSDebojyoti Ghosh /* ---------------------------------------------------------------------------------- */ 106349bd79ccSDebojyoti Ghosh /*@C 106449bd79ccSDebojyoti Ghosh MatCreateKAIJ - Creates a matrix type to be used for matrices of the following form: 106549bd79ccSDebojyoti Ghosh 106649bd79ccSDebojyoti Ghosh [I \otimes S + A \otimes T] 106749bd79ccSDebojyoti Ghosh 106849bd79ccSDebojyoti Ghosh where 106949bd79ccSDebojyoti Ghosh S is a dense (p \times q) matrix 107049bd79ccSDebojyoti Ghosh T is a dense (p \times q) matrix 107149bd79ccSDebojyoti Ghosh A is an AIJ (n \times n) matrix 107249bd79ccSDebojyoti Ghosh I is the identity matrix 107349bd79ccSDebojyoti Ghosh The resulting matrix is (np \times nq) 107449bd79ccSDebojyoti Ghosh 107549bd79ccSDebojyoti Ghosh The matrix type is based on MATSEQAIJ for a sequential matrix A, and MATMPIAIJ for a distributed matrix A. 107649bd79ccSDebojyoti Ghosh S is always stored independently on all processes as a PetscScalar array in column-major format. 107749bd79ccSDebojyoti Ghosh 107849bd79ccSDebojyoti Ghosh Collective 107949bd79ccSDebojyoti Ghosh 108049bd79ccSDebojyoti Ghosh Input Parameters: 108149bd79ccSDebojyoti Ghosh + A - the AIJ matrix 108249bd79ccSDebojyoti Ghosh . S - the S matrix, stored as a PetscScalar array (column-major) 108349bd79ccSDebojyoti Ghosh . T - the T matrix, stored as a PetscScalar array (column-major) 108449bd79ccSDebojyoti Ghosh . p - number of rows in S and T 108549bd79ccSDebojyoti Ghosh - q - number of columns in S and T 108649bd79ccSDebojyoti Ghosh 108749bd79ccSDebojyoti Ghosh Output Parameter: 108849bd79ccSDebojyoti Ghosh . kaij - the new KAIJ matrix 108949bd79ccSDebojyoti Ghosh 109049bd79ccSDebojyoti Ghosh Operations provided: 109149bd79ccSDebojyoti Ghosh + MatMult 109249bd79ccSDebojyoti Ghosh . MatMultAdd 109349bd79ccSDebojyoti Ghosh . MatInvertBlockDiagonal 109449bd79ccSDebojyoti Ghosh - MatView 109549bd79ccSDebojyoti Ghosh 109649bd79ccSDebojyoti Ghosh Level: advanced 109749bd79ccSDebojyoti Ghosh 10980567c835SRichard Tran Mills .seealso: MatKAIJSetAIJ(), MatKAIJSetS(), MatKAIJSetT(), MatKAIJGetAIJ(), MatKAIJGetS(), MatKAIJGetT(), MATKAIJ 109949bd79ccSDebojyoti Ghosh @*/ 110049bd79ccSDebojyoti Ghosh PetscErrorCode MatCreateKAIJ(Mat A,PetscInt p,PetscInt q,const PetscScalar S[],const PetscScalar T[],Mat *kaij) 110149bd79ccSDebojyoti Ghosh { 110249bd79ccSDebojyoti Ghosh PetscErrorCode ierr; 110349bd79ccSDebojyoti Ghosh PetscMPIInt size; 110449bd79ccSDebojyoti Ghosh 110549bd79ccSDebojyoti Ghosh PetscFunctionBegin; 11060567c835SRichard Tran Mills ierr = MatCreate(PetscObjectComm((PetscObject)A),kaij);CHKERRQ(ierr); 110749bd79ccSDebojyoti Ghosh ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 110849bd79ccSDebojyoti Ghosh if (size == 1) { 11090567c835SRichard Tran Mills ierr = MatSetType(*kaij,MATSEQKAIJ);CHKERRQ(ierr); 111049bd79ccSDebojyoti Ghosh } else { 11110567c835SRichard Tran Mills ierr = MatSetType(*kaij,MATMPIKAIJ);CHKERRQ(ierr); 111249bd79ccSDebojyoti Ghosh } 11130567c835SRichard Tran Mills ierr = MatKAIJSetAIJ(*kaij,A);CHKERRQ(ierr); 11140567c835SRichard Tran Mills ierr = MatKAIJSetS(*kaij,p,q,S);CHKERRQ(ierr); 11150567c835SRichard Tran Mills ierr = MatKAIJSetT(*kaij,p,q,T);CHKERRQ(ierr); 11160567c835SRichard Tran Mills ierr = MatSetUp(*kaij); 11170567c835SRichard Tran Mills PetscFunctionReturn(0); 11180567c835SRichard Tran Mills } 111949bd79ccSDebojyoti Ghosh 11200567c835SRichard Tran Mills /*MC 11210567c835SRichard Tran Mills MATKAIJ - MATKAIJ = "kaij" - A matrix type to be used to evaluate matrices of the following form: 11220567c835SRichard Tran Mills 11230567c835SRichard Tran Mills [I \otimes S + A \otimes T] 11240567c835SRichard Tran Mills 11250567c835SRichard Tran Mills where 11260567c835SRichard Tran Mills S is a dense (p \times q) matrix 11270567c835SRichard Tran Mills T is a dense (p \times q) matrix 11280567c835SRichard Tran Mills A is an AIJ (n \times n) matrix 11290567c835SRichard Tran Mills I is the identity matrix 11300567c835SRichard Tran Mills The resulting matrix is (np \times nq) 11310567c835SRichard Tran Mills 11320567c835SRichard Tran Mills The matrix type is based on MATSEQAIJ for a sequential matrix A, and MATMPIAIJ for a distributed matrix A. 11330567c835SRichard Tran Mills S and T are always stored independently on all processes as a PetscScalar array in column-major format. 11340567c835SRichard Tran Mills 11350567c835SRichard Tran Mills Operations provided: 11360567c835SRichard Tran Mills + MatMult 11370567c835SRichard Tran Mills . MatMultAdd 11380567c835SRichard Tran Mills . MatInvertBlockDiagonal 11390567c835SRichard Tran Mills - MatView 11400567c835SRichard Tran Mills 11410567c835SRichard Tran Mills Level: advanced 11420567c835SRichard Tran Mills 11430567c835SRichard Tran Mills .seealso: MatKAIJSetAIJ(), MatKAIJSetS(), MatKAIJSetT(), MatKAIJGetAIJ(), MatKAIJGetS(), MatKAIJGetT(), MatCreateKAIJ() 11440567c835SRichard Tran Mills M*/ 11450567c835SRichard Tran Mills 11460567c835SRichard Tran Mills PETSC_EXTERN PetscErrorCode MatCreate_KAIJ(Mat A) 11470567c835SRichard Tran Mills { 11480567c835SRichard Tran Mills PetscErrorCode ierr; 11490567c835SRichard Tran Mills Mat_MPIKAIJ *b; 11500567c835SRichard Tran Mills PetscMPIInt size; 11510567c835SRichard Tran Mills 11520567c835SRichard Tran Mills PetscFunctionBegin; 11530567c835SRichard Tran Mills ierr = PetscNewLog(A,&b);CHKERRQ(ierr); 11540567c835SRichard Tran Mills A->data = (void*)b; 11550567c835SRichard Tran Mills 11560567c835SRichard Tran Mills ierr = PetscMemzero(A->ops,sizeof(struct _MatOps));CHKERRQ(ierr); 11570567c835SRichard Tran Mills 11580567c835SRichard Tran Mills A->ops->setup = MatSetUp_KAIJ; 11590567c835SRichard Tran Mills 11600567c835SRichard Tran Mills b->w = 0; 11610567c835SRichard Tran Mills ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 11620567c835SRichard Tran Mills if (size == 1) { 11630567c835SRichard Tran Mills ierr = PetscObjectChangeTypeName((PetscObject)A,MATSEQKAIJ);CHKERRQ(ierr); 11640567c835SRichard Tran Mills 11650567c835SRichard Tran Mills A->ops->setup = MatSetUp_KAIJ; 11660567c835SRichard Tran Mills A->ops->destroy = MatDestroy_SeqKAIJ; 11670567c835SRichard Tran Mills A->ops->view = MatView_SeqKAIJ; 11680567c835SRichard Tran Mills A->ops->mult = MatMult_SeqKAIJ_N; 11690567c835SRichard Tran Mills A->ops->multadd = MatMultAdd_SeqKAIJ_N; 11700567c835SRichard Tran Mills A->ops->invertblockdiagonal = MatInvertBlockDiagonal_SeqKAIJ_N; 11710567c835SRichard Tran Mills A->ops->getrow = MatGetRow_SeqKAIJ; 11720567c835SRichard Tran Mills A->ops->restorerow = MatRestoreRow_SeqKAIJ; 11730567c835SRichard Tran Mills A->ops->sor = MatSOR_SeqKAIJ; 11740567c835SRichard Tran Mills } else { 11750567c835SRichard Tran Mills ierr = PetscObjectChangeTypeName((PetscObject)A,MATMPIKAIJ);CHKERRQ(ierr); 11760567c835SRichard Tran Mills A->ops->setup = MatSetUp_KAIJ; 11770567c835SRichard Tran Mills A->ops->destroy = MatDestroy_MPIKAIJ; 11780567c835SRichard Tran Mills A->ops->view = MatView_MPIKAIJ; 11790567c835SRichard Tran Mills A->ops->mult = MatMult_MPIKAIJ_dof; 11800567c835SRichard Tran Mills A->ops->multadd = MatMultAdd_MPIKAIJ_dof; 11810567c835SRichard Tran Mills A->ops->invertblockdiagonal = MatInvertBlockDiagonal_MPIKAIJ_dof; 11820567c835SRichard Tran Mills A->ops->getrow = MatGetRow_MPIKAIJ; 11830567c835SRichard Tran Mills A->ops->restorerow = MatRestoreRow_MPIKAIJ; 11840567c835SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)A,"MatGetDiagonalBlock_C",MatGetDiagonalBlock_MPIKAIJ);CHKERRQ(ierr); 11850567c835SRichard Tran Mills } 11860567c835SRichard Tran Mills A->ops->createsubmatrix = MatCreateSubMatrix_KAIJ; 118749bd79ccSDebojyoti Ghosh PetscFunctionReturn(0); 118849bd79ccSDebojyoti Ghosh } 1189