12c0dbf93SJed Brown 2b45d2f2cSJed Brown #include <petsc-private/matimpl.h> /*I "petscmat.h" I*/ 32c0dbf93SJed Brown 42c0dbf93SJed Brown typedef struct { 52c0dbf93SJed Brown Mat Top; 62c0dbf93SJed Brown PetscErrorCode (*SetValues)(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar[],InsertMode); 72c0dbf93SJed Brown PetscErrorCode (*SetValuesBlocked)(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar[],InsertMode); 82c0dbf93SJed Brown } Mat_LocalRef; 92c0dbf93SJed Brown 102c0dbf93SJed Brown /* These need to be macros because they use sizeof */ 112c0dbf93SJed Brown #define IndexSpaceGet(buf,nrow,ncol,irowm,icolm) do { \ 12a52dc253SJed Brown if (nrow + ncol > (PetscInt)(sizeof(buf)/sizeof(buf[0]))) { \ 13dcca6d9dSJed Brown ierr = PetscMalloc2(nrow,&irowm,ncol,&icolm);CHKERRQ(ierr); \ 142c0dbf93SJed Brown } else { \ 152c0dbf93SJed Brown irowm = &buf[0]; \ 162c0dbf93SJed Brown icolm = &buf[nrow]; \ 172c0dbf93SJed Brown } \ 182c0dbf93SJed Brown } while (0) 192c0dbf93SJed Brown 202c0dbf93SJed Brown #define IndexSpaceRestore(buf,nrow,ncol,irowm,icolm) do { \ 21a52dc253SJed Brown if (nrow + ncol > (PetscInt)(sizeof(buf)/sizeof(buf[0]))) { \ 222c0dbf93SJed Brown ierr = PetscFree2(irowm,icolm);CHKERRQ(ierr); \ 232c0dbf93SJed Brown } \ 242c0dbf93SJed Brown } while (0) 252c0dbf93SJed Brown 262c0dbf93SJed Brown static void BlockIndicesExpand(PetscInt n,const PetscInt idx[],PetscInt bs,PetscInt idxm[]) 272c0dbf93SJed Brown { 282c0dbf93SJed Brown PetscInt i,j; 292c0dbf93SJed Brown for (i=0; i<n; i++) { 302c0dbf93SJed Brown for (j=0; j<bs; j++) { 312c0dbf93SJed Brown idxm[i*bs+j] = idx[i]*bs + j; 322c0dbf93SJed Brown } 332c0dbf93SJed Brown } 342c0dbf93SJed Brown } 352c0dbf93SJed Brown 362c0dbf93SJed Brown #undef __FUNCT__ 372c0dbf93SJed Brown #define __FUNCT__ "MatSetValuesBlockedLocal_LocalRef_Block" 382c0dbf93SJed Brown static PetscErrorCode MatSetValuesBlockedLocal_LocalRef_Block(Mat A,PetscInt nrow,const PetscInt irow[],PetscInt ncol,const PetscInt icol[],const PetscScalar y[],InsertMode addv) 392c0dbf93SJed Brown { 402c0dbf93SJed Brown Mat_LocalRef *lr = (Mat_LocalRef*)A->data; 412c0dbf93SJed Brown PetscErrorCode ierr; 422c0dbf93SJed Brown PetscInt buf[4096],*irowm,*icolm; 432c0dbf93SJed Brown 442c0dbf93SJed Brown PetscFunctionBegin; 452c0dbf93SJed Brown if (!nrow || !ncol) PetscFunctionReturn(0); 462c0dbf93SJed Brown IndexSpaceGet(buf,nrow,ncol,irowm,icolm); 47*45b6f7e9SBarry Smith ierr = ISLocalToGlobalMappingApplyBlock(A->rmap->mapping,nrow,irow,irowm);CHKERRQ(ierr); 48*45b6f7e9SBarry Smith ierr = ISLocalToGlobalMappingApplyBlock(A->cmap->mapping,ncol,icol,icolm);CHKERRQ(ierr); 492c0dbf93SJed Brown ierr = (*lr->SetValuesBlocked)(lr->Top,nrow,irowm,ncol,icolm,y,addv);CHKERRQ(ierr); 502c0dbf93SJed Brown IndexSpaceRestore(buf,nrow,ncol,irowm,icolm); 512c0dbf93SJed Brown PetscFunctionReturn(0); 522c0dbf93SJed Brown } 532c0dbf93SJed Brown 542c0dbf93SJed Brown #undef __FUNCT__ 552c0dbf93SJed Brown #define __FUNCT__ "MatSetValuesBlockedLocal_LocalRef_Scalar" 562c0dbf93SJed Brown static PetscErrorCode MatSetValuesBlockedLocal_LocalRef_Scalar(Mat A,PetscInt nrow,const PetscInt irow[],PetscInt ncol,const PetscInt icol[],const PetscScalar y[],InsertMode addv) 572c0dbf93SJed Brown { 582c0dbf93SJed Brown Mat_LocalRef *lr = (Mat_LocalRef*)A->data; 592c0dbf93SJed Brown PetscErrorCode ierr; 6033d57670SJed Brown PetscInt bs,buf[4096],*irowm,*icolm; 612c0dbf93SJed Brown 622c0dbf93SJed Brown PetscFunctionBegin; 6333d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 642c0dbf93SJed Brown IndexSpaceGet(buf,nrow*bs,ncol*bs,irowm,icolm); 652c0dbf93SJed Brown BlockIndicesExpand(nrow,irow,bs,irowm); 662c0dbf93SJed Brown BlockIndicesExpand(ncol,icol,bs,icolm); 67992144d0SBarry Smith ierr = ISLocalToGlobalMappingApply(A->rmap->mapping,nrow*bs,irowm,irowm);CHKERRQ(ierr); 68992144d0SBarry Smith ierr = ISLocalToGlobalMappingApply(A->cmap->mapping,ncol*bs,icolm,icolm);CHKERRQ(ierr); 692c0dbf93SJed Brown ierr = (*lr->SetValues)(lr->Top,nrow*bs,irowm,ncol*bs,icolm,y,addv);CHKERRQ(ierr); 702c0dbf93SJed Brown IndexSpaceRestore(buf,nrow*bs,ncol*bs,irowm,icolm); 712c0dbf93SJed Brown PetscFunctionReturn(0); 722c0dbf93SJed Brown } 732c0dbf93SJed Brown 742c0dbf93SJed Brown #undef __FUNCT__ 752c0dbf93SJed Brown #define __FUNCT__ "MatSetValuesLocal_LocalRef_Scalar" 762c0dbf93SJed Brown static PetscErrorCode MatSetValuesLocal_LocalRef_Scalar(Mat A,PetscInt nrow,const PetscInt irow[],PetscInt ncol,const PetscInt icol[],const PetscScalar y[],InsertMode addv) 772c0dbf93SJed Brown { 782c0dbf93SJed Brown Mat_LocalRef *lr = (Mat_LocalRef*)A->data; 792c0dbf93SJed Brown PetscErrorCode ierr; 802c0dbf93SJed Brown PetscInt buf[4096],*irowm,*icolm; 812c0dbf93SJed Brown 822c0dbf93SJed Brown PetscFunctionBegin; 832c0dbf93SJed Brown IndexSpaceGet(buf,nrow,ncol,irowm,icolm); 84992144d0SBarry Smith ierr = ISLocalToGlobalMappingApply(A->rmap->mapping,nrow,irow,irowm);CHKERRQ(ierr); 85992144d0SBarry Smith ierr = ISLocalToGlobalMappingApply(A->cmap->mapping,ncol,icol,icolm);CHKERRQ(ierr); 862c0dbf93SJed Brown ierr = (*lr->SetValues)(lr->Top,nrow,irowm,ncol,icolm,y,addv);CHKERRQ(ierr); 872c0dbf93SJed Brown IndexSpaceRestore(buf,nrow,ncol,irowm,icolm); 882c0dbf93SJed Brown PetscFunctionReturn(0); 892c0dbf93SJed Brown } 902c0dbf93SJed Brown 912c0dbf93SJed Brown #undef __FUNCT__ 922c0dbf93SJed Brown #define __FUNCT__ "ISL2GCompose" 932265a299SJed Brown /* Compose an IS with an ISLocalToGlobalMapping to map from IS source indices to global indices */ 942c0dbf93SJed Brown static PetscErrorCode ISL2GCompose(IS is,ISLocalToGlobalMapping ltog,ISLocalToGlobalMapping *cltog) 952c0dbf93SJed Brown { 962c0dbf93SJed Brown PetscErrorCode ierr; 972c0dbf93SJed Brown const PetscInt *idx; 982c0dbf93SJed Brown PetscInt m,*idxm; 992c0dbf93SJed Brown 1002c0dbf93SJed Brown PetscFunctionBegin; 101b3e8af9fSJed Brown PetscValidHeaderSpecific(is,IS_CLASSID,1); 102b3e8af9fSJed Brown PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,2); 103b3e8af9fSJed Brown PetscValidPointer(cltog,3); 1042c0dbf93SJed Brown ierr = ISGetLocalSize(is,&m);CHKERRQ(ierr); 1052c0dbf93SJed Brown ierr = ISGetIndices(is,&idx);CHKERRQ(ierr); 106785e854fSJed Brown ierr = PetscMalloc1(m,&idxm);CHKERRQ(ierr); 1072c0dbf93SJed Brown if (ltog) { 1082c0dbf93SJed Brown ierr = ISLocalToGlobalMappingApply(ltog,m,idx,idxm);CHKERRQ(ierr); 1092c0dbf93SJed Brown } else { 1102c0dbf93SJed Brown ierr = PetscMemcpy(idxm,idx,m*sizeof(PetscInt));CHKERRQ(ierr); 1112c0dbf93SJed Brown } 112f0413b6fSBarry Smith ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)is),1,m,idxm,PETSC_OWN_POINTER,cltog);CHKERRQ(ierr); 1132c0dbf93SJed Brown ierr = ISRestoreIndices(is,&idx);CHKERRQ(ierr); 1142c0dbf93SJed Brown PetscFunctionReturn(0); 1152c0dbf93SJed Brown } 1162c0dbf93SJed Brown 1172c0dbf93SJed Brown #undef __FUNCT__ 1182c0dbf93SJed Brown #define __FUNCT__ "ISL2GComposeBlock" 1192c0dbf93SJed Brown static PetscErrorCode ISL2GComposeBlock(IS is,ISLocalToGlobalMapping ltog,ISLocalToGlobalMapping *cltog) 1202c0dbf93SJed Brown { 1212c0dbf93SJed Brown PetscErrorCode ierr; 1222c0dbf93SJed Brown const PetscInt *idx; 123*45b6f7e9SBarry Smith PetscInt m,*idxm,bs; 1242c0dbf93SJed Brown 1252c0dbf93SJed Brown PetscFunctionBegin; 126b3e8af9fSJed Brown PetscValidHeaderSpecific(is,IS_CLASSID,1); 127b3e8af9fSJed Brown PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,2); 128b3e8af9fSJed Brown PetscValidPointer(cltog,3); 1292c0dbf93SJed Brown ierr = ISBlockGetLocalSize(is,&m);CHKERRQ(ierr); 1302c0dbf93SJed Brown ierr = ISBlockGetIndices(is,&idx);CHKERRQ(ierr); 131*45b6f7e9SBarry Smith ierr = ISLocalToGlobalMappingGetBlockSize(ltog,&bs);CHKERRQ(ierr); 132785e854fSJed Brown ierr = PetscMalloc1(m,&idxm);CHKERRQ(ierr); 1332c0dbf93SJed Brown if (ltog) { 134*45b6f7e9SBarry Smith ierr = ISLocalToGlobalMappingApplyBlock(ltog,m,idx,idxm);CHKERRQ(ierr); 1352c0dbf93SJed Brown } else { 1362c0dbf93SJed Brown ierr = PetscMemcpy(idxm,idx,m*sizeof(PetscInt));CHKERRQ(ierr); 1372c0dbf93SJed Brown } 138*45b6f7e9SBarry Smith ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)is),bs,m,idxm,PETSC_OWN_POINTER,cltog);CHKERRQ(ierr); 1392c0dbf93SJed Brown ierr = ISBlockRestoreIndices(is,&idx);CHKERRQ(ierr); 1402c0dbf93SJed Brown PetscFunctionReturn(0); 1412c0dbf93SJed Brown } 1422c0dbf93SJed Brown 1432c0dbf93SJed Brown #undef __FUNCT__ 1442c0dbf93SJed Brown #define __FUNCT__ "MatDestroy_LocalRef" 1452c0dbf93SJed Brown static PetscErrorCode MatDestroy_LocalRef(Mat B) 1462c0dbf93SJed Brown { 1472c0dbf93SJed Brown PetscErrorCode ierr; 1482c0dbf93SJed Brown 1492c0dbf93SJed Brown PetscFunctionBegin; 1502c0dbf93SJed Brown ierr = PetscFree(B->data);CHKERRQ(ierr); 1512c0dbf93SJed Brown PetscFunctionReturn(0); 1522c0dbf93SJed Brown } 1532c0dbf93SJed Brown 1542c0dbf93SJed Brown 1552c0dbf93SJed Brown #undef __FUNCT__ 1562c0dbf93SJed Brown #define __FUNCT__ "MatCreateLocalRef" 1572c0dbf93SJed Brown /*@ 1582c0dbf93SJed Brown MatCreateLocalRef - Gets a logical reference to a local submatrix, for use in assembly 1592c0dbf93SJed Brown 1602c0dbf93SJed Brown Not Collective 1612c0dbf93SJed Brown 1622c0dbf93SJed Brown Input Arguments: 1632c0dbf93SJed Brown + A - Full matrix, generally parallel 1642c0dbf93SJed Brown . isrow - Local index set for the rows 1652c0dbf93SJed Brown - iscol - Local index set for the columns 1662c0dbf93SJed Brown 1672c0dbf93SJed Brown Output Arguments: 1682c0dbf93SJed Brown . newmat - New serial Mat 1692c0dbf93SJed Brown 1702c0dbf93SJed Brown Level: developer 1712c0dbf93SJed Brown 1722c0dbf93SJed Brown Notes: 1732c0dbf93SJed Brown Most will use MatGetLocalSubMatrix() which returns a real matrix corresponding to the local 1742c0dbf93SJed Brown block if it available, such as with matrix formats that store these blocks separately. 1752c0dbf93SJed Brown 1762c0dbf93SJed Brown The new matrix forwards MatSetValuesLocal() and MatSetValuesBlockedLocal() to the global system. 1772c0dbf93SJed Brown In general, it does not define MatMult() or any other functions. Local submatrices can be nested. 1782c0dbf93SJed Brown 1792c0dbf93SJed Brown .seealso: MatSetValuesLocal(), MatSetValuesBlockedLocal(), MatGetLocalSubMatrix(), MatCreateSubMatrix() 1802c0dbf93SJed Brown @*/ 1817087cfbeSBarry Smith PetscErrorCode MatCreateLocalRef(Mat A,IS isrow,IS iscol,Mat *newmat) 1822c0dbf93SJed Brown { 1832c0dbf93SJed Brown PetscErrorCode ierr; 1842c0dbf93SJed Brown Mat_LocalRef *lr; 1852c0dbf93SJed Brown Mat B; 1862c0dbf93SJed Brown PetscInt m,n; 1872c0dbf93SJed Brown PetscBool islr; 1882c0dbf93SJed Brown 1892c0dbf93SJed Brown PetscFunctionBegin; 1902c0dbf93SJed Brown PetscValidHeaderSpecific(A,MAT_CLASSID,1); 1912c0dbf93SJed Brown PetscValidHeaderSpecific(isrow,IS_CLASSID,2); 1922c0dbf93SJed Brown PetscValidHeaderSpecific(iscol,IS_CLASSID,3); 1932c0dbf93SJed Brown PetscValidPointer(newmat,4); 1942c0dbf93SJed Brown *newmat = 0; 1952c0dbf93SJed Brown 1962c0dbf93SJed Brown ierr = MatCreate(PETSC_COMM_SELF,&B);CHKERRQ(ierr); 1972c0dbf93SJed Brown ierr = ISGetLocalSize(isrow,&m);CHKERRQ(ierr); 1982c0dbf93SJed Brown ierr = ISGetLocalSize(iscol,&n);CHKERRQ(ierr); 1992c0dbf93SJed Brown ierr = MatSetSizes(B,m,n,m,n);CHKERRQ(ierr); 2002c0dbf93SJed Brown ierr = PetscObjectChangeTypeName((PetscObject)B,MATLOCALREF);CHKERRQ(ierr); 201be7c243fSJed Brown ierr = MatSetUp(B);CHKERRQ(ierr); 2022c0dbf93SJed Brown 2032c0dbf93SJed Brown B->ops->destroy = MatDestroy_LocalRef; 2042c0dbf93SJed Brown 205b00a9115SJed Brown ierr = PetscNewLog(B,&lr);CHKERRQ(ierr); 2062c0dbf93SJed Brown B->data = (void*)lr; 2072c0dbf93SJed Brown 208251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATLOCALREF,&islr);CHKERRQ(ierr); 2092265a299SJed Brown if (islr) { 2102265a299SJed Brown Mat_LocalRef *alr = (Mat_LocalRef*)A->data; 2112265a299SJed Brown lr->Top = alr->Top; 2122265a299SJed Brown } else { 2132265a299SJed Brown /* This does not increase the reference count because MatLocalRef is not allowed to live longer than its parent */ 2142265a299SJed Brown lr->Top = A; 2152265a299SJed Brown } 2162265a299SJed Brown { 2172c0dbf93SJed Brown ISLocalToGlobalMapping rltog,cltog; 2182c0dbf93SJed Brown PetscInt abs,rbs,cbs; 2192c0dbf93SJed Brown 2202265a299SJed Brown /* We will translate directly to global indices for the top level */ 2212c0dbf93SJed Brown lr->SetValues = MatSetValues; 2222c0dbf93SJed Brown lr->SetValuesBlocked = MatSetValuesBlocked; 2232c0dbf93SJed Brown 2242c0dbf93SJed Brown B->ops->setvalueslocal = MatSetValuesLocal_LocalRef_Scalar; 2252205254eSKarl Rupp 226992144d0SBarry Smith ierr = ISL2GCompose(isrow,A->rmap->mapping,&rltog);CHKERRQ(ierr); 227992144d0SBarry Smith if (isrow == iscol && A->rmap->mapping == A->cmap->mapping) { 2282c0dbf93SJed Brown ierr = PetscObjectReference((PetscObject)rltog);CHKERRQ(ierr); 2292c0dbf93SJed Brown cltog = rltog; 2302c0dbf93SJed Brown } else { 231992144d0SBarry Smith ierr = ISL2GCompose(iscol,A->cmap->mapping,&cltog);CHKERRQ(ierr); 2322c0dbf93SJed Brown } 2332c0dbf93SJed Brown ierr = MatSetLocalToGlobalMapping(B,rltog,cltog);CHKERRQ(ierr); 2346bf464f9SBarry Smith ierr = ISLocalToGlobalMappingDestroy(&rltog);CHKERRQ(ierr); 2356bf464f9SBarry Smith ierr = ISLocalToGlobalMappingDestroy(&cltog);CHKERRQ(ierr); 2362c0dbf93SJed Brown 2372c0dbf93SJed Brown ierr = MatGetBlockSize(A,&abs);CHKERRQ(ierr); 238520db06cSJed Brown ierr = ISGetBlockSize(isrow,&rbs);CHKERRQ(ierr); 239520db06cSJed Brown ierr = ISGetBlockSize(iscol,&cbs);CHKERRQ(ierr); 2402c0dbf93SJed Brown if (rbs == cbs) { /* submatrix has block structure, so user can insert values with blocked interface */ 24192ea8381SJed Brown ierr = PetscLayoutSetBlockSize(B->rmap,rbs);CHKERRQ(ierr); 24292ea8381SJed Brown ierr = PetscLayoutSetBlockSize(B->cmap,cbs);CHKERRQ(ierr); 24392ea8381SJed Brown if (abs != rbs || abs == 1) { 2442c0dbf93SJed Brown /* Top-level matrix has different block size, so we have to call its scalar insertion interface */ 2452c0dbf93SJed Brown B->ops->setvaluesblockedlocal = MatSetValuesBlockedLocal_LocalRef_Scalar; 2462c0dbf93SJed Brown } else { 2472c0dbf93SJed Brown /* Block sizes match so we can forward values to the top level using the block interface */ 2482c0dbf93SJed Brown B->ops->setvaluesblockedlocal = MatSetValuesBlockedLocal_LocalRef_Block; 24926fbe8dcSKarl Rupp 250*45b6f7e9SBarry Smith ierr = ISL2GComposeBlock(isrow,A->rmap->mapping,&rltog);CHKERRQ(ierr); 251*45b6f7e9SBarry Smith if (isrow == iscol && A->rmap->mapping == A->cmap->mapping) { 2522c0dbf93SJed Brown ierr = PetscObjectReference((PetscObject)rltog);CHKERRQ(ierr); 2532c0dbf93SJed Brown cltog = rltog; 2542c0dbf93SJed Brown } else { 255*45b6f7e9SBarry Smith ierr = ISL2GComposeBlock(iscol,A->cmap->mapping,&cltog);CHKERRQ(ierr); 2562c0dbf93SJed Brown } 257*45b6f7e9SBarry Smith ierr = MatSetLocalToGlobalMapping(B,rltog,cltog);CHKERRQ(ierr); 2586bf464f9SBarry Smith ierr = ISLocalToGlobalMappingDestroy(&rltog);CHKERRQ(ierr); 2596bf464f9SBarry Smith ierr = ISLocalToGlobalMappingDestroy(&cltog);CHKERRQ(ierr); 2602c0dbf93SJed Brown } 2612c0dbf93SJed Brown } 2622c0dbf93SJed Brown } 2632c0dbf93SJed Brown *newmat = B; 2642c0dbf93SJed Brown PetscFunctionReturn(0); 2652c0dbf93SJed Brown } 266