1be1d678aSKris Buschelman 282b1193eSBarry Smith /* 3cd3bbe55SBarry Smith Defines the basic matrix operations for the MAIJ matrix storage format. 4cd3bbe55SBarry Smith This format is used for restriction and interpolation operations for 5cd3bbe55SBarry Smith multicomponent problems. It interpolates each component the same way 6cd3bbe55SBarry Smith independently. 7cd3bbe55SBarry Smith 8cd3bbe55SBarry Smith We provide: 9cd3bbe55SBarry Smith MatMult() 10cd3bbe55SBarry Smith MatMultTranspose() 11cd3bbe55SBarry Smith MatMultTransposeAdd() 12cd3bbe55SBarry Smith MatMultAdd() 13cd3bbe55SBarry Smith and 14cd3bbe55SBarry Smith MatCreateMAIJ(Mat,dof,Mat*) 15f4a53059SBarry Smith 16f4a53059SBarry Smith This single directory handles both the sequential and parallel codes 1782b1193eSBarry Smith */ 1882b1193eSBarry Smith 19c6db04a5SJed Brown #include <../src/mat/impls/maij/maij.h> /*I "petscmat.h" I*/ 20c6db04a5SJed Brown #include <../src/mat/utils/freespace.h> 2182b1193eSBarry Smith 22b350b9acSSatish Balay /*@ 23ff585edeSJed Brown MatMAIJGetAIJ - Get the AIJ matrix describing the blockwise action of the MAIJ matrix 24ff585edeSJed Brown 25ff585edeSJed Brown Not Collective, but if the MAIJ matrix is parallel, the AIJ matrix is also parallel 26ff585edeSJed Brown 27ff585edeSJed Brown Input Parameter: 28ff585edeSJed Brown . A - the MAIJ matrix 29ff585edeSJed Brown 30ff585edeSJed Brown Output Parameter: 31ff585edeSJed Brown . B - the AIJ matrix 32ff585edeSJed Brown 33ff585edeSJed Brown Level: advanced 34ff585edeSJed Brown 35ff585edeSJed Brown Notes: The reference count on the AIJ matrix is not increased so you should not destroy it. 36ff585edeSJed Brown 37ff585edeSJed Brown .seealso: MatCreateMAIJ() 38ff585edeSJed Brown @*/ 397087cfbeSBarry Smith PetscErrorCode MatMAIJGetAIJ(Mat A,Mat *B) 40b9b97703SBarry Smith { 41dfbe8321SBarry Smith PetscErrorCode ierr; 42ace3abfcSBarry Smith PetscBool ismpimaij,isseqmaij; 43b9b97703SBarry Smith 44b9b97703SBarry Smith PetscFunctionBegin; 45251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIMAIJ,&ismpimaij);CHKERRQ(ierr); 46251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQMAIJ,&isseqmaij);CHKERRQ(ierr); 47b9b97703SBarry Smith if (ismpimaij) { 48b9b97703SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 49b9b97703SBarry Smith 50b9b97703SBarry Smith *B = b->A; 51b9b97703SBarry Smith } else if (isseqmaij) { 52b9b97703SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 53b9b97703SBarry Smith 54b9b97703SBarry Smith *B = b->AIJ; 55b9b97703SBarry Smith } else { 56b9b97703SBarry Smith *B = A; 57b9b97703SBarry Smith } 58b9b97703SBarry Smith PetscFunctionReturn(0); 59b9b97703SBarry Smith } 60b9b97703SBarry Smith 61480dffcfSJed Brown /*@ 62ff585edeSJed Brown MatMAIJRedimension - Get an MAIJ matrix with the same action, but for a different block size 63ff585edeSJed Brown 643f9fe445SBarry Smith Logically Collective 65ff585edeSJed Brown 66ff585edeSJed Brown Input Parameter: 67ff585edeSJed Brown + A - the MAIJ matrix 68ff585edeSJed Brown - dof - the block size for the new matrix 69ff585edeSJed Brown 70ff585edeSJed Brown Output Parameter: 71ff585edeSJed Brown . B - the new MAIJ matrix 72ff585edeSJed Brown 73ff585edeSJed Brown Level: advanced 74ff585edeSJed Brown 75ff585edeSJed Brown .seealso: MatCreateMAIJ() 76ff585edeSJed Brown @*/ 777087cfbeSBarry Smith PetscErrorCode MatMAIJRedimension(Mat A,PetscInt dof,Mat *B) 78b9b97703SBarry Smith { 79dfbe8321SBarry Smith PetscErrorCode ierr; 800298fd71SBarry Smith Mat Aij = NULL; 81b9b97703SBarry Smith 82b9b97703SBarry Smith PetscFunctionBegin; 83c5eb9154SBarry Smith PetscValidLogicalCollectiveInt(A,dof,2); 84b9b97703SBarry Smith ierr = MatMAIJGetAIJ(A,&Aij);CHKERRQ(ierr); 85b9b97703SBarry Smith ierr = MatCreateMAIJ(Aij,dof,B);CHKERRQ(ierr); 86b9b97703SBarry Smith PetscFunctionReturn(0); 87b9b97703SBarry Smith } 88b9b97703SBarry Smith 89dfbe8321SBarry Smith PetscErrorCode MatDestroy_SeqMAIJ(Mat A) 9082b1193eSBarry Smith { 91dfbe8321SBarry Smith PetscErrorCode ierr; 924cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9382b1193eSBarry Smith 9482b1193eSBarry Smith PetscFunctionBegin; 956bf464f9SBarry Smith ierr = MatDestroy(&b->AIJ);CHKERRQ(ierr); 96bf0cc555SLisandro Dalcin ierr = PetscFree(A->data);CHKERRQ(ierr); 97bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_seqmaij_seqaij_C",NULL);CHKERRQ(ierr); 98bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaij_seqmaij_C",NULL);CHKERRQ(ierr); 99*59e29146SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaijperm_seqmaij_C",NULL);CHKERRQ(ierr); 100279e4bd4SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaijmkl_seqmaij_C",NULL);CHKERRQ(ierr); 1014cb9d9b8SBarry Smith PetscFunctionReturn(0); 1024cb9d9b8SBarry Smith } 1034cb9d9b8SBarry Smith 104356c569eSBarry Smith PetscErrorCode MatSetUp_MAIJ(Mat A) 105356c569eSBarry Smith { 106356c569eSBarry Smith PetscFunctionBegin; 107ce94432eSBarry Smith SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Must use MatCreateMAIJ() to create MAIJ matrices"); 108356c569eSBarry Smith PetscFunctionReturn(0); 109356c569eSBarry Smith } 110356c569eSBarry Smith 1110fd73130SBarry Smith PetscErrorCode MatView_SeqMAIJ(Mat A,PetscViewer viewer) 1120fd73130SBarry Smith { 1130fd73130SBarry Smith PetscErrorCode ierr; 1140fd73130SBarry Smith Mat B; 1150fd73130SBarry Smith 1160fd73130SBarry Smith PetscFunctionBegin; 117a2ea699eSBarry Smith ierr = MatConvert(A,MATSEQAIJ,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr); 1180fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 1196bf464f9SBarry Smith ierr = MatDestroy(&B);CHKERRQ(ierr); 1200fd73130SBarry Smith PetscFunctionReturn(0); 1210fd73130SBarry Smith } 1220fd73130SBarry Smith 1230fd73130SBarry Smith PetscErrorCode MatView_MPIMAIJ(Mat A,PetscViewer viewer) 1240fd73130SBarry Smith { 1250fd73130SBarry Smith PetscErrorCode ierr; 1260fd73130SBarry Smith Mat B; 1270fd73130SBarry Smith 1280fd73130SBarry Smith PetscFunctionBegin; 129a2ea699eSBarry Smith ierr = MatConvert(A,MATMPIAIJ,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr); 1300fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 1316bf464f9SBarry Smith ierr = MatDestroy(&B);CHKERRQ(ierr); 1320fd73130SBarry Smith PetscFunctionReturn(0); 1330fd73130SBarry Smith } 1340fd73130SBarry Smith 135dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIMAIJ(Mat A) 1364cb9d9b8SBarry Smith { 137dfbe8321SBarry Smith PetscErrorCode ierr; 1384cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1394cb9d9b8SBarry Smith 1404cb9d9b8SBarry Smith PetscFunctionBegin; 1416bf464f9SBarry Smith ierr = MatDestroy(&b->AIJ);CHKERRQ(ierr); 1426bf464f9SBarry Smith ierr = MatDestroy(&b->OAIJ);CHKERRQ(ierr); 1436bf464f9SBarry Smith ierr = MatDestroy(&b->A);CHKERRQ(ierr); 1446bf464f9SBarry Smith ierr = VecScatterDestroy(&b->ctx);CHKERRQ(ierr); 1456bf464f9SBarry Smith ierr = VecDestroy(&b->w);CHKERRQ(ierr); 146bf0cc555SLisandro Dalcin ierr = PetscFree(A->data);CHKERRQ(ierr); 147bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_mpimaij_mpiaij_C",NULL);CHKERRQ(ierr); 148bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_mpiaij_mpimaij_C",NULL);CHKERRQ(ierr); 149dbd8c25aSHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,0);CHKERRQ(ierr); 150b9b97703SBarry Smith PetscFunctionReturn(0); 151b9b97703SBarry Smith } 152b9b97703SBarry Smith 1530bad9183SKris Buschelman /*MC 154fafad747SKris Buschelman MATMAIJ - MATMAIJ = "maij" - A matrix type to be used for restriction and interpolation operations for 1550bad9183SKris Buschelman multicomponent problems, interpolating or restricting each component the same way independently. 1560bad9183SKris Buschelman The matrix type is based on MATSEQAIJ for sequential matrices, and MATMPIAIJ for distributed matrices. 1570bad9183SKris Buschelman 1580bad9183SKris Buschelman Operations provided: 1590bad9183SKris Buschelman . MatMult 1600bad9183SKris Buschelman . MatMultTranspose 1610bad9183SKris Buschelman . MatMultAdd 1620bad9183SKris Buschelman . MatMultTransposeAdd 1630bad9183SKris Buschelman 1640bad9183SKris Buschelman Level: advanced 1650bad9183SKris Buschelman 166b409243cSBarry Smith .seealso: MatMAIJGetAIJ(), MatMAIJRedimension(), MatCreateMAIJ() 1670bad9183SKris Buschelman M*/ 1680bad9183SKris Buschelman 1698cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MAIJ(Mat A) 17082b1193eSBarry Smith { 171dfbe8321SBarry Smith PetscErrorCode ierr; 1724cb9d9b8SBarry Smith Mat_MPIMAIJ *b; 17364b52464SHong Zhang PetscMPIInt size; 17482b1193eSBarry Smith 17582b1193eSBarry Smith PetscFunctionBegin; 176b00a9115SJed Brown ierr = PetscNewLog(A,&b);CHKERRQ(ierr); 177b0a32e0cSBarry Smith A->data = (void*)b; 17826fbe8dcSKarl Rupp 179cd3bbe55SBarry Smith ierr = PetscMemzero(A->ops,sizeof(struct _MatOps));CHKERRQ(ierr); 18026fbe8dcSKarl Rupp 181356c569eSBarry Smith A->ops->setup = MatSetUp_MAIJ; 182f4a53059SBarry Smith 183cd3bbe55SBarry Smith b->AIJ = 0; 184cd3bbe55SBarry Smith b->dof = 0; 185f4a53059SBarry Smith b->OAIJ = 0; 186f4a53059SBarry Smith b->ctx = 0; 187f4a53059SBarry Smith b->w = 0; 188ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 18964b52464SHong Zhang if (size == 1) { 19064b52464SHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,MATSEQMAIJ);CHKERRQ(ierr); 19164b52464SHong Zhang } else { 19264b52464SHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,MATMPIMAIJ);CHKERRQ(ierr); 19364b52464SHong Zhang } 19432e7c8b0SBarry Smith A->preallocated = PETSC_TRUE; 19532e7c8b0SBarry Smith A->assembled = PETSC_TRUE; 19682b1193eSBarry Smith PetscFunctionReturn(0); 19782b1193eSBarry Smith } 19882b1193eSBarry Smith 199cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 200dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 20182b1193eSBarry Smith { 2024cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 203bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 204d2840e09SBarry Smith const PetscScalar *x,*v; 205d2840e09SBarry Smith PetscScalar *y, sum1, sum2; 206dfbe8321SBarry Smith PetscErrorCode ierr; 207d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 208d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 20982b1193eSBarry Smith 210bcc973b7SBarry Smith PetscFunctionBegin; 2113649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2121ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 213bcc973b7SBarry Smith idx = a->j; 214bcc973b7SBarry Smith v = a->a; 215bcc973b7SBarry Smith ii = a->i; 216bcc973b7SBarry Smith 217bcc973b7SBarry Smith for (i=0; i<m; i++) { 218bcc973b7SBarry Smith jrow = ii[i]; 219bcc973b7SBarry Smith n = ii[i+1] - jrow; 220bcc973b7SBarry Smith sum1 = 0.0; 221bcc973b7SBarry Smith sum2 = 0.0; 22226fbe8dcSKarl Rupp 223b3c51c66SMatthew Knepley nonzerorow += (n>0); 224bcc973b7SBarry Smith for (j=0; j<n; j++) { 225bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 226bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 227bcc973b7SBarry Smith jrow++; 228bcc973b7SBarry Smith } 229bcc973b7SBarry Smith y[2*i] = sum1; 230bcc973b7SBarry Smith y[2*i+1] = sum2; 231bcc973b7SBarry Smith } 232bcc973b7SBarry Smith 233dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz - 2.0*nonzerorow);CHKERRQ(ierr); 2343649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2351ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 23682b1193eSBarry Smith PetscFunctionReturn(0); 23782b1193eSBarry Smith } 238bcc973b7SBarry Smith 239dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 24082b1193eSBarry Smith { 2414cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 242bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 243d2840e09SBarry Smith const PetscScalar *x,*v; 244d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2; 245dfbe8321SBarry Smith PetscErrorCode ierr; 246d2840e09SBarry Smith PetscInt n,i; 247d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 24882b1193eSBarry Smith 249bcc973b7SBarry Smith PetscFunctionBegin; 250d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 2513649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2521ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 253bfec09a0SHong Zhang 254bcc973b7SBarry Smith for (i=0; i<m; i++) { 255bfec09a0SHong Zhang idx = a->j + a->i[i]; 256bfec09a0SHong Zhang v = a->a + a->i[i]; 257bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 258bcc973b7SBarry Smith alpha1 = x[2*i]; 259bcc973b7SBarry Smith alpha2 = x[2*i+1]; 26026fbe8dcSKarl Rupp while (n-->0) { 26126fbe8dcSKarl Rupp y[2*(*idx)] += alpha1*(*v); 26226fbe8dcSKarl Rupp y[2*(*idx)+1] += alpha2*(*v); 26326fbe8dcSKarl Rupp idx++; v++; 26426fbe8dcSKarl Rupp } 265bcc973b7SBarry Smith } 266dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 2673649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2681ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 26982b1193eSBarry Smith PetscFunctionReturn(0); 27082b1193eSBarry Smith } 271bcc973b7SBarry Smith 272dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 27382b1193eSBarry Smith { 2744cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 275bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 276d2840e09SBarry Smith const PetscScalar *x,*v; 277d2840e09SBarry Smith PetscScalar *y,sum1, sum2; 278dfbe8321SBarry Smith PetscErrorCode ierr; 279b24ad042SBarry Smith PetscInt n,i,jrow,j; 280d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 28182b1193eSBarry Smith 282bcc973b7SBarry Smith PetscFunctionBegin; 283f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 2843649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2851ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 286bcc973b7SBarry Smith idx = a->j; 287bcc973b7SBarry Smith v = a->a; 288bcc973b7SBarry Smith ii = a->i; 289bcc973b7SBarry Smith 290bcc973b7SBarry Smith for (i=0; i<m; i++) { 291bcc973b7SBarry Smith jrow = ii[i]; 292bcc973b7SBarry Smith n = ii[i+1] - jrow; 293bcc973b7SBarry Smith sum1 = 0.0; 294bcc973b7SBarry Smith sum2 = 0.0; 295bcc973b7SBarry Smith for (j=0; j<n; j++) { 296bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 297bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 298bcc973b7SBarry Smith jrow++; 299bcc973b7SBarry Smith } 300bcc973b7SBarry Smith y[2*i] += sum1; 301bcc973b7SBarry Smith y[2*i+1] += sum2; 302bcc973b7SBarry Smith } 303bcc973b7SBarry Smith 304dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 3053649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3061ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 307bcc973b7SBarry Smith PetscFunctionReturn(0); 30882b1193eSBarry Smith } 309dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 31082b1193eSBarry Smith { 3114cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 312bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 313d2840e09SBarry Smith const PetscScalar *x,*v; 314d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2; 315dfbe8321SBarry Smith PetscErrorCode ierr; 316d2840e09SBarry Smith PetscInt n,i; 317d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 31882b1193eSBarry Smith 319bcc973b7SBarry Smith PetscFunctionBegin; 320f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 3213649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3221ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 323bfec09a0SHong Zhang 324bcc973b7SBarry Smith for (i=0; i<m; i++) { 325bfec09a0SHong Zhang idx = a->j + a->i[i]; 326bfec09a0SHong Zhang v = a->a + a->i[i]; 327bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 328bcc973b7SBarry Smith alpha1 = x[2*i]; 329bcc973b7SBarry Smith alpha2 = x[2*i+1]; 33026fbe8dcSKarl Rupp while (n-->0) { 33126fbe8dcSKarl Rupp y[2*(*idx)] += alpha1*(*v); 33226fbe8dcSKarl Rupp y[2*(*idx)+1] += alpha2*(*v); 33326fbe8dcSKarl Rupp idx++; v++; 33426fbe8dcSKarl Rupp } 335bcc973b7SBarry Smith } 336dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 3373649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3381ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 339bcc973b7SBarry Smith PetscFunctionReturn(0); 34082b1193eSBarry Smith } 341cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 342dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 343bcc973b7SBarry Smith { 3444cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 345bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 346d2840e09SBarry Smith const PetscScalar *x,*v; 347d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3; 348dfbe8321SBarry Smith PetscErrorCode ierr; 349d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 350d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 35182b1193eSBarry Smith 352bcc973b7SBarry Smith PetscFunctionBegin; 3533649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3541ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 355bcc973b7SBarry Smith idx = a->j; 356bcc973b7SBarry Smith v = a->a; 357bcc973b7SBarry Smith ii = a->i; 358bcc973b7SBarry Smith 359bcc973b7SBarry Smith for (i=0; i<m; i++) { 360bcc973b7SBarry Smith jrow = ii[i]; 361bcc973b7SBarry Smith n = ii[i+1] - jrow; 362bcc973b7SBarry Smith sum1 = 0.0; 363bcc973b7SBarry Smith sum2 = 0.0; 364bcc973b7SBarry Smith sum3 = 0.0; 36526fbe8dcSKarl Rupp 366b3c51c66SMatthew Knepley nonzerorow += (n>0); 367bcc973b7SBarry Smith for (j=0; j<n; j++) { 368bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 369bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 370bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 371bcc973b7SBarry Smith jrow++; 372bcc973b7SBarry Smith } 373bcc973b7SBarry Smith y[3*i] = sum1; 374bcc973b7SBarry Smith y[3*i+1] = sum2; 375bcc973b7SBarry Smith y[3*i+2] = sum3; 376bcc973b7SBarry Smith } 377bcc973b7SBarry Smith 378dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz - 3.0*nonzerorow);CHKERRQ(ierr); 3793649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3801ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 381bcc973b7SBarry Smith PetscFunctionReturn(0); 382bcc973b7SBarry Smith } 383bcc973b7SBarry Smith 384dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 385bcc973b7SBarry Smith { 3864cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 387bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 388d2840e09SBarry Smith const PetscScalar *x,*v; 389d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3; 390dfbe8321SBarry Smith PetscErrorCode ierr; 391d2840e09SBarry Smith PetscInt n,i; 392d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 393bcc973b7SBarry Smith 394bcc973b7SBarry Smith PetscFunctionBegin; 395d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 3963649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3971ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 398bfec09a0SHong Zhang 399bcc973b7SBarry Smith for (i=0; i<m; i++) { 400bfec09a0SHong Zhang idx = a->j + a->i[i]; 401bfec09a0SHong Zhang v = a->a + a->i[i]; 402bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 403bcc973b7SBarry Smith alpha1 = x[3*i]; 404bcc973b7SBarry Smith alpha2 = x[3*i+1]; 405bcc973b7SBarry Smith alpha3 = x[3*i+2]; 406bcc973b7SBarry Smith while (n-->0) { 407bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 408bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 409bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 410bcc973b7SBarry Smith idx++; v++; 411bcc973b7SBarry Smith } 412bcc973b7SBarry Smith } 413dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz);CHKERRQ(ierr); 4143649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 4151ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 416bcc973b7SBarry Smith PetscFunctionReturn(0); 417bcc973b7SBarry Smith } 418bcc973b7SBarry Smith 419dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 420bcc973b7SBarry Smith { 4214cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 422bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 423d2840e09SBarry Smith const PetscScalar *x,*v; 424d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3; 425dfbe8321SBarry Smith PetscErrorCode ierr; 426b24ad042SBarry Smith PetscInt n,i,jrow,j; 427d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 428bcc973b7SBarry Smith 429bcc973b7SBarry Smith PetscFunctionBegin; 430f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 4313649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 4321ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 433bcc973b7SBarry Smith idx = a->j; 434bcc973b7SBarry Smith v = a->a; 435bcc973b7SBarry Smith ii = a->i; 436bcc973b7SBarry Smith 437bcc973b7SBarry Smith for (i=0; i<m; i++) { 438bcc973b7SBarry Smith jrow = ii[i]; 439bcc973b7SBarry Smith n = ii[i+1] - jrow; 440bcc973b7SBarry Smith sum1 = 0.0; 441bcc973b7SBarry Smith sum2 = 0.0; 442bcc973b7SBarry Smith sum3 = 0.0; 443bcc973b7SBarry Smith for (j=0; j<n; j++) { 444bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 445bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 446bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 447bcc973b7SBarry Smith jrow++; 448bcc973b7SBarry Smith } 449bcc973b7SBarry Smith y[3*i] += sum1; 450bcc973b7SBarry Smith y[3*i+1] += sum2; 451bcc973b7SBarry Smith y[3*i+2] += sum3; 452bcc973b7SBarry Smith } 453bcc973b7SBarry Smith 454dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz);CHKERRQ(ierr); 4553649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 4561ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 457bcc973b7SBarry Smith PetscFunctionReturn(0); 458bcc973b7SBarry Smith } 459dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 460bcc973b7SBarry Smith { 4614cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 462bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 463d2840e09SBarry Smith const PetscScalar *x,*v; 464d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3; 465dfbe8321SBarry Smith PetscErrorCode ierr; 466d2840e09SBarry Smith PetscInt n,i; 467d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 468bcc973b7SBarry Smith 469bcc973b7SBarry Smith PetscFunctionBegin; 470f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 4713649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 4721ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 473bcc973b7SBarry Smith for (i=0; i<m; i++) { 474bfec09a0SHong Zhang idx = a->j + a->i[i]; 475bfec09a0SHong Zhang v = a->a + a->i[i]; 476bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 477bcc973b7SBarry Smith alpha1 = x[3*i]; 478bcc973b7SBarry Smith alpha2 = x[3*i+1]; 479bcc973b7SBarry Smith alpha3 = x[3*i+2]; 480bcc973b7SBarry Smith while (n-->0) { 481bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 482bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 483bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 484bcc973b7SBarry Smith idx++; v++; 485bcc973b7SBarry Smith } 486bcc973b7SBarry Smith } 487dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz);CHKERRQ(ierr); 4883649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 4891ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 490bcc973b7SBarry Smith PetscFunctionReturn(0); 491bcc973b7SBarry Smith } 492bcc973b7SBarry Smith 493bcc973b7SBarry Smith /* ------------------------------------------------------------------------------*/ 494dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 495bcc973b7SBarry Smith { 4964cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 497bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 498d2840e09SBarry Smith const PetscScalar *x,*v; 499d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4; 500dfbe8321SBarry Smith PetscErrorCode ierr; 501d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 502d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 503bcc973b7SBarry Smith 504bcc973b7SBarry Smith PetscFunctionBegin; 5053649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5061ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 507bcc973b7SBarry Smith idx = a->j; 508bcc973b7SBarry Smith v = a->a; 509bcc973b7SBarry Smith ii = a->i; 510bcc973b7SBarry Smith 511bcc973b7SBarry Smith for (i=0; i<m; i++) { 512bcc973b7SBarry Smith jrow = ii[i]; 513bcc973b7SBarry Smith n = ii[i+1] - jrow; 514bcc973b7SBarry Smith sum1 = 0.0; 515bcc973b7SBarry Smith sum2 = 0.0; 516bcc973b7SBarry Smith sum3 = 0.0; 517bcc973b7SBarry Smith sum4 = 0.0; 518b3c51c66SMatthew Knepley nonzerorow += (n>0); 519bcc973b7SBarry Smith for (j=0; j<n; j++) { 520bcc973b7SBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 521bcc973b7SBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 522bcc973b7SBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 523bcc973b7SBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 524bcc973b7SBarry Smith jrow++; 525bcc973b7SBarry Smith } 526bcc973b7SBarry Smith y[4*i] = sum1; 527bcc973b7SBarry Smith y[4*i+1] = sum2; 528bcc973b7SBarry Smith y[4*i+2] = sum3; 529bcc973b7SBarry Smith y[4*i+3] = sum4; 530bcc973b7SBarry Smith } 531bcc973b7SBarry Smith 532dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz - 4.0*nonzerorow);CHKERRQ(ierr); 5333649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 5341ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 535bcc973b7SBarry Smith PetscFunctionReturn(0); 536bcc973b7SBarry Smith } 537bcc973b7SBarry Smith 538dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 539bcc973b7SBarry Smith { 5404cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 541bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 542d2840e09SBarry Smith const PetscScalar *x,*v; 543d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4; 544dfbe8321SBarry Smith PetscErrorCode ierr; 545d2840e09SBarry Smith PetscInt n,i; 546d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 547bcc973b7SBarry Smith 548bcc973b7SBarry Smith PetscFunctionBegin; 549d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 5503649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5511ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 552bcc973b7SBarry Smith for (i=0; i<m; i++) { 553bfec09a0SHong Zhang idx = a->j + a->i[i]; 554bfec09a0SHong Zhang v = a->a + a->i[i]; 555bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 556bcc973b7SBarry Smith alpha1 = x[4*i]; 557bcc973b7SBarry Smith alpha2 = x[4*i+1]; 558bcc973b7SBarry Smith alpha3 = x[4*i+2]; 559bcc973b7SBarry Smith alpha4 = x[4*i+3]; 560bcc973b7SBarry Smith while (n-->0) { 561bcc973b7SBarry Smith y[4*(*idx)] += alpha1*(*v); 562bcc973b7SBarry Smith y[4*(*idx)+1] += alpha2*(*v); 563bcc973b7SBarry Smith y[4*(*idx)+2] += alpha3*(*v); 564bcc973b7SBarry Smith y[4*(*idx)+3] += alpha4*(*v); 565bcc973b7SBarry Smith idx++; v++; 566bcc973b7SBarry Smith } 567bcc973b7SBarry Smith } 568dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz);CHKERRQ(ierr); 5693649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 5701ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 571bcc973b7SBarry Smith PetscFunctionReturn(0); 572bcc973b7SBarry Smith } 573bcc973b7SBarry Smith 574dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 575bcc973b7SBarry Smith { 5764cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 577f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 578d2840e09SBarry Smith const PetscScalar *x,*v; 579d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4; 580dfbe8321SBarry Smith PetscErrorCode ierr; 581b24ad042SBarry Smith PetscInt n,i,jrow,j; 582d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 583f9fae5adSBarry Smith 584f9fae5adSBarry Smith PetscFunctionBegin; 585f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 5863649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5871ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 588f9fae5adSBarry Smith idx = a->j; 589f9fae5adSBarry Smith v = a->a; 590f9fae5adSBarry Smith ii = a->i; 591f9fae5adSBarry Smith 592f9fae5adSBarry Smith for (i=0; i<m; i++) { 593f9fae5adSBarry Smith jrow = ii[i]; 594f9fae5adSBarry Smith n = ii[i+1] - jrow; 595f9fae5adSBarry Smith sum1 = 0.0; 596f9fae5adSBarry Smith sum2 = 0.0; 597f9fae5adSBarry Smith sum3 = 0.0; 598f9fae5adSBarry Smith sum4 = 0.0; 599f9fae5adSBarry Smith for (j=0; j<n; j++) { 600f9fae5adSBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 601f9fae5adSBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 602f9fae5adSBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 603f9fae5adSBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 604f9fae5adSBarry Smith jrow++; 605f9fae5adSBarry Smith } 606f9fae5adSBarry Smith y[4*i] += sum1; 607f9fae5adSBarry Smith y[4*i+1] += sum2; 608f9fae5adSBarry Smith y[4*i+2] += sum3; 609f9fae5adSBarry Smith y[4*i+3] += sum4; 610f9fae5adSBarry Smith } 611f9fae5adSBarry Smith 612dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz);CHKERRQ(ierr); 6133649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 6141ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 615f9fae5adSBarry Smith PetscFunctionReturn(0); 616bcc973b7SBarry Smith } 617dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 618bcc973b7SBarry Smith { 6194cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 620f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 621d2840e09SBarry Smith const PetscScalar *x,*v; 622d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4; 623dfbe8321SBarry Smith PetscErrorCode ierr; 624d2840e09SBarry Smith PetscInt n,i; 625d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 626f9fae5adSBarry Smith 627f9fae5adSBarry Smith PetscFunctionBegin; 628f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 6293649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 6301ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 631bfec09a0SHong Zhang 632f9fae5adSBarry Smith for (i=0; i<m; i++) { 633bfec09a0SHong Zhang idx = a->j + a->i[i]; 634bfec09a0SHong Zhang v = a->a + a->i[i]; 635f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 636f9fae5adSBarry Smith alpha1 = x[4*i]; 637f9fae5adSBarry Smith alpha2 = x[4*i+1]; 638f9fae5adSBarry Smith alpha3 = x[4*i+2]; 639f9fae5adSBarry Smith alpha4 = x[4*i+3]; 640f9fae5adSBarry Smith while (n-->0) { 641f9fae5adSBarry Smith y[4*(*idx)] += alpha1*(*v); 642f9fae5adSBarry Smith y[4*(*idx)+1] += alpha2*(*v); 643f9fae5adSBarry Smith y[4*(*idx)+2] += alpha3*(*v); 644f9fae5adSBarry Smith y[4*(*idx)+3] += alpha4*(*v); 645f9fae5adSBarry Smith idx++; v++; 646f9fae5adSBarry Smith } 647f9fae5adSBarry Smith } 648dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz);CHKERRQ(ierr); 6493649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 6501ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 651f9fae5adSBarry Smith PetscFunctionReturn(0); 652f9fae5adSBarry Smith } 653f9fae5adSBarry Smith /* ------------------------------------------------------------------------------*/ 6546cd98798SBarry Smith 655dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 656f9fae5adSBarry Smith { 6574cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 658f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 659d2840e09SBarry Smith const PetscScalar *x,*v; 660d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5; 661dfbe8321SBarry Smith PetscErrorCode ierr; 662d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 663d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 664f9fae5adSBarry Smith 665f9fae5adSBarry Smith PetscFunctionBegin; 6663649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 6671ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 668f9fae5adSBarry Smith idx = a->j; 669f9fae5adSBarry Smith v = a->a; 670f9fae5adSBarry Smith ii = a->i; 671f9fae5adSBarry Smith 672f9fae5adSBarry Smith for (i=0; i<m; i++) { 673f9fae5adSBarry Smith jrow = ii[i]; 674f9fae5adSBarry Smith n = ii[i+1] - jrow; 675f9fae5adSBarry Smith sum1 = 0.0; 676f9fae5adSBarry Smith sum2 = 0.0; 677f9fae5adSBarry Smith sum3 = 0.0; 678f9fae5adSBarry Smith sum4 = 0.0; 679f9fae5adSBarry Smith sum5 = 0.0; 68026fbe8dcSKarl Rupp 681b3c51c66SMatthew Knepley nonzerorow += (n>0); 682f9fae5adSBarry Smith for (j=0; j<n; j++) { 683f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 684f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 685f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 686f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 687f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 688f9fae5adSBarry Smith jrow++; 689f9fae5adSBarry Smith } 690f9fae5adSBarry Smith y[5*i] = sum1; 691f9fae5adSBarry Smith y[5*i+1] = sum2; 692f9fae5adSBarry Smith y[5*i+2] = sum3; 693f9fae5adSBarry Smith y[5*i+3] = sum4; 694f9fae5adSBarry Smith y[5*i+4] = sum5; 695f9fae5adSBarry Smith } 696f9fae5adSBarry Smith 697dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz - 5.0*nonzerorow);CHKERRQ(ierr); 6983649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 6991ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 700f9fae5adSBarry Smith PetscFunctionReturn(0); 701f9fae5adSBarry Smith } 702f9fae5adSBarry Smith 703dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 704f9fae5adSBarry Smith { 7054cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 706f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 707d2840e09SBarry Smith const PetscScalar *x,*v; 708d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5; 709dfbe8321SBarry Smith PetscErrorCode ierr; 710d2840e09SBarry Smith PetscInt n,i; 711d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 712f9fae5adSBarry Smith 713f9fae5adSBarry Smith PetscFunctionBegin; 714d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 7153649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 7161ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 717bfec09a0SHong Zhang 718f9fae5adSBarry Smith for (i=0; i<m; i++) { 719bfec09a0SHong Zhang idx = a->j + a->i[i]; 720bfec09a0SHong Zhang v = a->a + a->i[i]; 721f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 722f9fae5adSBarry Smith alpha1 = x[5*i]; 723f9fae5adSBarry Smith alpha2 = x[5*i+1]; 724f9fae5adSBarry Smith alpha3 = x[5*i+2]; 725f9fae5adSBarry Smith alpha4 = x[5*i+3]; 726f9fae5adSBarry Smith alpha5 = x[5*i+4]; 727f9fae5adSBarry Smith while (n-->0) { 728f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 729f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 730f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 731f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 732f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 733f9fae5adSBarry Smith idx++; v++; 734f9fae5adSBarry Smith } 735f9fae5adSBarry Smith } 736dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz);CHKERRQ(ierr); 7373649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 7381ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 739f9fae5adSBarry Smith PetscFunctionReturn(0); 740f9fae5adSBarry Smith } 741f9fae5adSBarry Smith 742dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 743f9fae5adSBarry Smith { 7444cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 745f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 746d2840e09SBarry Smith const PetscScalar *x,*v; 747d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5; 748dfbe8321SBarry Smith PetscErrorCode ierr; 749b24ad042SBarry Smith PetscInt n,i,jrow,j; 750d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 751f9fae5adSBarry Smith 752f9fae5adSBarry Smith PetscFunctionBegin; 753f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 7543649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 7551ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 756f9fae5adSBarry Smith idx = a->j; 757f9fae5adSBarry Smith v = a->a; 758f9fae5adSBarry Smith ii = a->i; 759f9fae5adSBarry Smith 760f9fae5adSBarry Smith for (i=0; i<m; i++) { 761f9fae5adSBarry Smith jrow = ii[i]; 762f9fae5adSBarry Smith n = ii[i+1] - jrow; 763f9fae5adSBarry Smith sum1 = 0.0; 764f9fae5adSBarry Smith sum2 = 0.0; 765f9fae5adSBarry Smith sum3 = 0.0; 766f9fae5adSBarry Smith sum4 = 0.0; 767f9fae5adSBarry Smith sum5 = 0.0; 768f9fae5adSBarry Smith for (j=0; j<n; j++) { 769f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 770f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 771f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 772f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 773f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 774f9fae5adSBarry Smith jrow++; 775f9fae5adSBarry Smith } 776f9fae5adSBarry Smith y[5*i] += sum1; 777f9fae5adSBarry Smith y[5*i+1] += sum2; 778f9fae5adSBarry Smith y[5*i+2] += sum3; 779f9fae5adSBarry Smith y[5*i+3] += sum4; 780f9fae5adSBarry Smith y[5*i+4] += sum5; 781f9fae5adSBarry Smith } 782f9fae5adSBarry Smith 783dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz);CHKERRQ(ierr); 7843649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 7851ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 786f9fae5adSBarry Smith PetscFunctionReturn(0); 787f9fae5adSBarry Smith } 788f9fae5adSBarry Smith 789dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 790f9fae5adSBarry Smith { 7914cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 792f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 793d2840e09SBarry Smith const PetscScalar *x,*v; 794d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5; 795dfbe8321SBarry Smith PetscErrorCode ierr; 796d2840e09SBarry Smith PetscInt n,i; 797d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 798f9fae5adSBarry Smith 799f9fae5adSBarry Smith PetscFunctionBegin; 800f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 8013649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8021ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 803bfec09a0SHong Zhang 804f9fae5adSBarry Smith for (i=0; i<m; i++) { 805bfec09a0SHong Zhang idx = a->j + a->i[i]; 806bfec09a0SHong Zhang v = a->a + a->i[i]; 807f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 808f9fae5adSBarry Smith alpha1 = x[5*i]; 809f9fae5adSBarry Smith alpha2 = x[5*i+1]; 810f9fae5adSBarry Smith alpha3 = x[5*i+2]; 811f9fae5adSBarry Smith alpha4 = x[5*i+3]; 812f9fae5adSBarry Smith alpha5 = x[5*i+4]; 813f9fae5adSBarry Smith while (n-->0) { 814f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 815f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 816f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 817f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 818f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 819f9fae5adSBarry Smith idx++; v++; 820f9fae5adSBarry Smith } 821f9fae5adSBarry Smith } 822dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz);CHKERRQ(ierr); 8233649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 8241ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 825f9fae5adSBarry Smith PetscFunctionReturn(0); 826bcc973b7SBarry Smith } 827bcc973b7SBarry Smith 8286cd98798SBarry Smith /* ------------------------------------------------------------------------------*/ 829dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 8306cd98798SBarry Smith { 8316cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8326cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 833d2840e09SBarry Smith const PetscScalar *x,*v; 834d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6; 835dfbe8321SBarry Smith PetscErrorCode ierr; 836d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 837d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 8386cd98798SBarry Smith 8396cd98798SBarry Smith PetscFunctionBegin; 8403649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8411ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 8426cd98798SBarry Smith idx = a->j; 8436cd98798SBarry Smith v = a->a; 8446cd98798SBarry Smith ii = a->i; 8456cd98798SBarry Smith 8466cd98798SBarry Smith for (i=0; i<m; i++) { 8476cd98798SBarry Smith jrow = ii[i]; 8486cd98798SBarry Smith n = ii[i+1] - jrow; 8496cd98798SBarry Smith sum1 = 0.0; 8506cd98798SBarry Smith sum2 = 0.0; 8516cd98798SBarry Smith sum3 = 0.0; 8526cd98798SBarry Smith sum4 = 0.0; 8536cd98798SBarry Smith sum5 = 0.0; 8546cd98798SBarry Smith sum6 = 0.0; 85526fbe8dcSKarl Rupp 856b3c51c66SMatthew Knepley nonzerorow += (n>0); 8576cd98798SBarry Smith for (j=0; j<n; j++) { 8586cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 8596cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 8606cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 8616cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 8626cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 8636cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 8646cd98798SBarry Smith jrow++; 8656cd98798SBarry Smith } 8666cd98798SBarry Smith y[6*i] = sum1; 8676cd98798SBarry Smith y[6*i+1] = sum2; 8686cd98798SBarry Smith y[6*i+2] = sum3; 8696cd98798SBarry Smith y[6*i+3] = sum4; 8706cd98798SBarry Smith y[6*i+4] = sum5; 8716cd98798SBarry Smith y[6*i+5] = sum6; 8726cd98798SBarry Smith } 8736cd98798SBarry Smith 874dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz - 6.0*nonzerorow);CHKERRQ(ierr); 8753649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 8761ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 8776cd98798SBarry Smith PetscFunctionReturn(0); 8786cd98798SBarry Smith } 8796cd98798SBarry Smith 880dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 8816cd98798SBarry Smith { 8826cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8836cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 884d2840e09SBarry Smith const PetscScalar *x,*v; 885d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6; 886dfbe8321SBarry Smith PetscErrorCode ierr; 887d2840e09SBarry Smith PetscInt n,i; 888d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 8896cd98798SBarry Smith 8906cd98798SBarry Smith PetscFunctionBegin; 891d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 8923649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8931ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 894bfec09a0SHong Zhang 8956cd98798SBarry Smith for (i=0; i<m; i++) { 896bfec09a0SHong Zhang idx = a->j + a->i[i]; 897bfec09a0SHong Zhang v = a->a + a->i[i]; 8986cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 8996cd98798SBarry Smith alpha1 = x[6*i]; 9006cd98798SBarry Smith alpha2 = x[6*i+1]; 9016cd98798SBarry Smith alpha3 = x[6*i+2]; 9026cd98798SBarry Smith alpha4 = x[6*i+3]; 9036cd98798SBarry Smith alpha5 = x[6*i+4]; 9046cd98798SBarry Smith alpha6 = x[6*i+5]; 9056cd98798SBarry Smith while (n-->0) { 9066cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 9076cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 9086cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 9096cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 9106cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 9116cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 9126cd98798SBarry Smith idx++; v++; 9136cd98798SBarry Smith } 9146cd98798SBarry Smith } 915dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz);CHKERRQ(ierr); 9163649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 9171ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 9186cd98798SBarry Smith PetscFunctionReturn(0); 9196cd98798SBarry Smith } 9206cd98798SBarry Smith 921dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 9226cd98798SBarry Smith { 9236cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9246cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 925d2840e09SBarry Smith const PetscScalar *x,*v; 926d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6; 927dfbe8321SBarry Smith PetscErrorCode ierr; 928b24ad042SBarry Smith PetscInt n,i,jrow,j; 929d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 9306cd98798SBarry Smith 9316cd98798SBarry Smith PetscFunctionBegin; 9326cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 9333649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 9341ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 9356cd98798SBarry Smith idx = a->j; 9366cd98798SBarry Smith v = a->a; 9376cd98798SBarry Smith ii = a->i; 9386cd98798SBarry Smith 9396cd98798SBarry Smith for (i=0; i<m; i++) { 9406cd98798SBarry Smith jrow = ii[i]; 9416cd98798SBarry Smith n = ii[i+1] - jrow; 9426cd98798SBarry Smith sum1 = 0.0; 9436cd98798SBarry Smith sum2 = 0.0; 9446cd98798SBarry Smith sum3 = 0.0; 9456cd98798SBarry Smith sum4 = 0.0; 9466cd98798SBarry Smith sum5 = 0.0; 9476cd98798SBarry Smith sum6 = 0.0; 9486cd98798SBarry Smith for (j=0; j<n; j++) { 9496cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 9506cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 9516cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 9526cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 9536cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 9546cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 9556cd98798SBarry Smith jrow++; 9566cd98798SBarry Smith } 9576cd98798SBarry Smith y[6*i] += sum1; 9586cd98798SBarry Smith y[6*i+1] += sum2; 9596cd98798SBarry Smith y[6*i+2] += sum3; 9606cd98798SBarry Smith y[6*i+3] += sum4; 9616cd98798SBarry Smith y[6*i+4] += sum5; 9626cd98798SBarry Smith y[6*i+5] += sum6; 9636cd98798SBarry Smith } 9646cd98798SBarry Smith 965dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz);CHKERRQ(ierr); 9663649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 9671ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 9686cd98798SBarry Smith PetscFunctionReturn(0); 9696cd98798SBarry Smith } 9706cd98798SBarry Smith 971dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 9726cd98798SBarry Smith { 9736cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9746cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 975d2840e09SBarry Smith const PetscScalar *x,*v; 976d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6; 977dfbe8321SBarry Smith PetscErrorCode ierr; 978d2840e09SBarry Smith PetscInt n,i; 979d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 9806cd98798SBarry Smith 9816cd98798SBarry Smith PetscFunctionBegin; 9826cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 9833649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 9841ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 985bfec09a0SHong Zhang 9866cd98798SBarry Smith for (i=0; i<m; i++) { 987bfec09a0SHong Zhang idx = a->j + a->i[i]; 988bfec09a0SHong Zhang v = a->a + a->i[i]; 9896cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 9906cd98798SBarry Smith alpha1 = x[6*i]; 9916cd98798SBarry Smith alpha2 = x[6*i+1]; 9926cd98798SBarry Smith alpha3 = x[6*i+2]; 9936cd98798SBarry Smith alpha4 = x[6*i+3]; 9946cd98798SBarry Smith alpha5 = x[6*i+4]; 9956cd98798SBarry Smith alpha6 = x[6*i+5]; 9966cd98798SBarry Smith while (n-->0) { 9976cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 9986cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 9996cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 10006cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 10016cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 10026cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 10036cd98798SBarry Smith idx++; v++; 10046cd98798SBarry Smith } 10056cd98798SBarry Smith } 1006dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz);CHKERRQ(ierr); 10073649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 10081ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 10096cd98798SBarry Smith PetscFunctionReturn(0); 10106cd98798SBarry Smith } 10116cd98798SBarry Smith 101266ed3db0SBarry Smith /* ------------------------------------------------------------------------------*/ 1013ed8eea03SBarry Smith PetscErrorCode MatMult_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 1014ed8eea03SBarry Smith { 1015ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1016ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1017d2840e09SBarry Smith const PetscScalar *x,*v; 1018d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 1019ed8eea03SBarry Smith PetscErrorCode ierr; 1020d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1021d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 1022ed8eea03SBarry Smith 1023ed8eea03SBarry Smith PetscFunctionBegin; 10243649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1025ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1026ed8eea03SBarry Smith idx = a->j; 1027ed8eea03SBarry Smith v = a->a; 1028ed8eea03SBarry Smith ii = a->i; 1029ed8eea03SBarry Smith 1030ed8eea03SBarry Smith for (i=0; i<m; i++) { 1031ed8eea03SBarry Smith jrow = ii[i]; 1032ed8eea03SBarry Smith n = ii[i+1] - jrow; 1033ed8eea03SBarry Smith sum1 = 0.0; 1034ed8eea03SBarry Smith sum2 = 0.0; 1035ed8eea03SBarry Smith sum3 = 0.0; 1036ed8eea03SBarry Smith sum4 = 0.0; 1037ed8eea03SBarry Smith sum5 = 0.0; 1038ed8eea03SBarry Smith sum6 = 0.0; 1039ed8eea03SBarry Smith sum7 = 0.0; 104026fbe8dcSKarl Rupp 1041b3c51c66SMatthew Knepley nonzerorow += (n>0); 1042ed8eea03SBarry Smith for (j=0; j<n; j++) { 1043ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1044ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1045ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1046ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1047ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1048ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1049ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1050ed8eea03SBarry Smith jrow++; 1051ed8eea03SBarry Smith } 1052ed8eea03SBarry Smith y[7*i] = sum1; 1053ed8eea03SBarry Smith y[7*i+1] = sum2; 1054ed8eea03SBarry Smith y[7*i+2] = sum3; 1055ed8eea03SBarry Smith y[7*i+3] = sum4; 1056ed8eea03SBarry Smith y[7*i+4] = sum5; 1057ed8eea03SBarry Smith y[7*i+5] = sum6; 1058ed8eea03SBarry Smith y[7*i+6] = sum7; 1059ed8eea03SBarry Smith } 1060ed8eea03SBarry Smith 1061dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz - 7.0*nonzerorow);CHKERRQ(ierr); 10623649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1063ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1064ed8eea03SBarry Smith PetscFunctionReturn(0); 1065ed8eea03SBarry Smith } 1066ed8eea03SBarry Smith 1067ed8eea03SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 1068ed8eea03SBarry Smith { 1069ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1070ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1071d2840e09SBarry Smith const PetscScalar *x,*v; 1072d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7; 1073ed8eea03SBarry Smith PetscErrorCode ierr; 1074d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1075d2840e09SBarry Smith PetscInt n,i; 1076ed8eea03SBarry Smith 1077ed8eea03SBarry Smith PetscFunctionBegin; 1078d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 10793649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1080ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1081ed8eea03SBarry Smith 1082ed8eea03SBarry Smith for (i=0; i<m; i++) { 1083ed8eea03SBarry Smith idx = a->j + a->i[i]; 1084ed8eea03SBarry Smith v = a->a + a->i[i]; 1085ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1086ed8eea03SBarry Smith alpha1 = x[7*i]; 1087ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1088ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1089ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1090ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1091ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1092ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1093ed8eea03SBarry Smith while (n-->0) { 1094ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1095ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1096ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1097ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1098ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1099ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1100ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1101ed8eea03SBarry Smith idx++; v++; 1102ed8eea03SBarry Smith } 1103ed8eea03SBarry Smith } 1104dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz);CHKERRQ(ierr); 11053649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1106ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1107ed8eea03SBarry Smith PetscFunctionReturn(0); 1108ed8eea03SBarry Smith } 1109ed8eea03SBarry Smith 1110ed8eea03SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1111ed8eea03SBarry Smith { 1112ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1113ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1114d2840e09SBarry Smith const PetscScalar *x,*v; 1115d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 1116ed8eea03SBarry Smith PetscErrorCode ierr; 1117d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1118ed8eea03SBarry Smith PetscInt n,i,jrow,j; 1119ed8eea03SBarry Smith 1120ed8eea03SBarry Smith PetscFunctionBegin; 1121ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 11223649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1123ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1124ed8eea03SBarry Smith idx = a->j; 1125ed8eea03SBarry Smith v = a->a; 1126ed8eea03SBarry Smith ii = a->i; 1127ed8eea03SBarry Smith 1128ed8eea03SBarry Smith for (i=0; i<m; i++) { 1129ed8eea03SBarry Smith jrow = ii[i]; 1130ed8eea03SBarry Smith n = ii[i+1] - jrow; 1131ed8eea03SBarry Smith sum1 = 0.0; 1132ed8eea03SBarry Smith sum2 = 0.0; 1133ed8eea03SBarry Smith sum3 = 0.0; 1134ed8eea03SBarry Smith sum4 = 0.0; 1135ed8eea03SBarry Smith sum5 = 0.0; 1136ed8eea03SBarry Smith sum6 = 0.0; 1137ed8eea03SBarry Smith sum7 = 0.0; 1138ed8eea03SBarry Smith for (j=0; j<n; j++) { 1139ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1140ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1141ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1142ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1143ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1144ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1145ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1146ed8eea03SBarry Smith jrow++; 1147ed8eea03SBarry Smith } 1148ed8eea03SBarry Smith y[7*i] += sum1; 1149ed8eea03SBarry Smith y[7*i+1] += sum2; 1150ed8eea03SBarry Smith y[7*i+2] += sum3; 1151ed8eea03SBarry Smith y[7*i+3] += sum4; 1152ed8eea03SBarry Smith y[7*i+4] += sum5; 1153ed8eea03SBarry Smith y[7*i+5] += sum6; 1154ed8eea03SBarry Smith y[7*i+6] += sum7; 1155ed8eea03SBarry Smith } 1156ed8eea03SBarry Smith 1157dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz);CHKERRQ(ierr); 11583649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1159ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1160ed8eea03SBarry Smith PetscFunctionReturn(0); 1161ed8eea03SBarry Smith } 1162ed8eea03SBarry Smith 1163ed8eea03SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1164ed8eea03SBarry Smith { 1165ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1166ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1167d2840e09SBarry Smith const PetscScalar *x,*v; 1168d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7; 1169ed8eea03SBarry Smith PetscErrorCode ierr; 1170d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1171d2840e09SBarry Smith PetscInt n,i; 1172ed8eea03SBarry Smith 1173ed8eea03SBarry Smith PetscFunctionBegin; 1174ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 11753649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1176ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1177ed8eea03SBarry Smith for (i=0; i<m; i++) { 1178ed8eea03SBarry Smith idx = a->j + a->i[i]; 1179ed8eea03SBarry Smith v = a->a + a->i[i]; 1180ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1181ed8eea03SBarry Smith alpha1 = x[7*i]; 1182ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1183ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1184ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1185ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1186ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1187ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1188ed8eea03SBarry Smith while (n-->0) { 1189ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1190ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1191ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1192ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1193ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1194ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1195ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1196ed8eea03SBarry Smith idx++; v++; 1197ed8eea03SBarry Smith } 1198ed8eea03SBarry Smith } 1199dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz);CHKERRQ(ierr); 12003649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1201ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1202ed8eea03SBarry Smith PetscFunctionReturn(0); 1203ed8eea03SBarry Smith } 1204ed8eea03SBarry Smith 1205dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 120666ed3db0SBarry Smith { 120766ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 120866ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1209d2840e09SBarry Smith const PetscScalar *x,*v; 1210d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1211dfbe8321SBarry Smith PetscErrorCode ierr; 1212d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1213d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 121466ed3db0SBarry Smith 121566ed3db0SBarry Smith PetscFunctionBegin; 12163649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 12171ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 121866ed3db0SBarry Smith idx = a->j; 121966ed3db0SBarry Smith v = a->a; 122066ed3db0SBarry Smith ii = a->i; 122166ed3db0SBarry Smith 122266ed3db0SBarry Smith for (i=0; i<m; i++) { 122366ed3db0SBarry Smith jrow = ii[i]; 122466ed3db0SBarry Smith n = ii[i+1] - jrow; 122566ed3db0SBarry Smith sum1 = 0.0; 122666ed3db0SBarry Smith sum2 = 0.0; 122766ed3db0SBarry Smith sum3 = 0.0; 122866ed3db0SBarry Smith sum4 = 0.0; 122966ed3db0SBarry Smith sum5 = 0.0; 123066ed3db0SBarry Smith sum6 = 0.0; 123166ed3db0SBarry Smith sum7 = 0.0; 123266ed3db0SBarry Smith sum8 = 0.0; 123326fbe8dcSKarl Rupp 1234b3c51c66SMatthew Knepley nonzerorow += (n>0); 123566ed3db0SBarry Smith for (j=0; j<n; j++) { 123666ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 123766ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 123866ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 123966ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 124066ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 124166ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 124266ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 124366ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 124466ed3db0SBarry Smith jrow++; 124566ed3db0SBarry Smith } 124666ed3db0SBarry Smith y[8*i] = sum1; 124766ed3db0SBarry Smith y[8*i+1] = sum2; 124866ed3db0SBarry Smith y[8*i+2] = sum3; 124966ed3db0SBarry Smith y[8*i+3] = sum4; 125066ed3db0SBarry Smith y[8*i+4] = sum5; 125166ed3db0SBarry Smith y[8*i+5] = sum6; 125266ed3db0SBarry Smith y[8*i+6] = sum7; 125366ed3db0SBarry Smith y[8*i+7] = sum8; 125466ed3db0SBarry Smith } 125566ed3db0SBarry Smith 1256dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz - 8.0*nonzerorow);CHKERRQ(ierr); 12573649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 12581ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 125966ed3db0SBarry Smith PetscFunctionReturn(0); 126066ed3db0SBarry Smith } 126166ed3db0SBarry Smith 1262dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 126366ed3db0SBarry Smith { 126466ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 126566ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1266d2840e09SBarry Smith const PetscScalar *x,*v; 1267d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 1268dfbe8321SBarry Smith PetscErrorCode ierr; 1269d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1270d2840e09SBarry Smith PetscInt n,i; 127166ed3db0SBarry Smith 127266ed3db0SBarry Smith PetscFunctionBegin; 1273d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 12743649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 12751ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1276bfec09a0SHong Zhang 127766ed3db0SBarry Smith for (i=0; i<m; i++) { 1278bfec09a0SHong Zhang idx = a->j + a->i[i]; 1279bfec09a0SHong Zhang v = a->a + a->i[i]; 128066ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 128166ed3db0SBarry Smith alpha1 = x[8*i]; 128266ed3db0SBarry Smith alpha2 = x[8*i+1]; 128366ed3db0SBarry Smith alpha3 = x[8*i+2]; 128466ed3db0SBarry Smith alpha4 = x[8*i+3]; 128566ed3db0SBarry Smith alpha5 = x[8*i+4]; 128666ed3db0SBarry Smith alpha6 = x[8*i+5]; 128766ed3db0SBarry Smith alpha7 = x[8*i+6]; 128866ed3db0SBarry Smith alpha8 = x[8*i+7]; 128966ed3db0SBarry Smith while (n-->0) { 129066ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 129166ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 129266ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 129366ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 129466ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 129566ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 129666ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 129766ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 129866ed3db0SBarry Smith idx++; v++; 129966ed3db0SBarry Smith } 130066ed3db0SBarry Smith } 1301dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz);CHKERRQ(ierr); 13023649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 13031ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 130466ed3db0SBarry Smith PetscFunctionReturn(0); 130566ed3db0SBarry Smith } 130666ed3db0SBarry Smith 1307dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 130866ed3db0SBarry Smith { 130966ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 131066ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1311d2840e09SBarry Smith const PetscScalar *x,*v; 1312d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1313dfbe8321SBarry Smith PetscErrorCode ierr; 1314d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1315b24ad042SBarry Smith PetscInt n,i,jrow,j; 131666ed3db0SBarry Smith 131766ed3db0SBarry Smith PetscFunctionBegin; 131866ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 13193649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 13201ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 132166ed3db0SBarry Smith idx = a->j; 132266ed3db0SBarry Smith v = a->a; 132366ed3db0SBarry Smith ii = a->i; 132466ed3db0SBarry Smith 132566ed3db0SBarry Smith for (i=0; i<m; i++) { 132666ed3db0SBarry Smith jrow = ii[i]; 132766ed3db0SBarry Smith n = ii[i+1] - jrow; 132866ed3db0SBarry Smith sum1 = 0.0; 132966ed3db0SBarry Smith sum2 = 0.0; 133066ed3db0SBarry Smith sum3 = 0.0; 133166ed3db0SBarry Smith sum4 = 0.0; 133266ed3db0SBarry Smith sum5 = 0.0; 133366ed3db0SBarry Smith sum6 = 0.0; 133466ed3db0SBarry Smith sum7 = 0.0; 133566ed3db0SBarry Smith sum8 = 0.0; 133666ed3db0SBarry Smith for (j=0; j<n; j++) { 133766ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 133866ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 133966ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 134066ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 134166ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 134266ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 134366ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 134466ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 134566ed3db0SBarry Smith jrow++; 134666ed3db0SBarry Smith } 134766ed3db0SBarry Smith y[8*i] += sum1; 134866ed3db0SBarry Smith y[8*i+1] += sum2; 134966ed3db0SBarry Smith y[8*i+2] += sum3; 135066ed3db0SBarry Smith y[8*i+3] += sum4; 135166ed3db0SBarry Smith y[8*i+4] += sum5; 135266ed3db0SBarry Smith y[8*i+5] += sum6; 135366ed3db0SBarry Smith y[8*i+6] += sum7; 135466ed3db0SBarry Smith y[8*i+7] += sum8; 135566ed3db0SBarry Smith } 135666ed3db0SBarry Smith 1357dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz);CHKERRQ(ierr); 13583649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 13591ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 136066ed3db0SBarry Smith PetscFunctionReturn(0); 136166ed3db0SBarry Smith } 136266ed3db0SBarry Smith 1363dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 136466ed3db0SBarry Smith { 136566ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 136666ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1367d2840e09SBarry Smith const PetscScalar *x,*v; 1368d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 1369dfbe8321SBarry Smith PetscErrorCode ierr; 1370d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1371d2840e09SBarry Smith PetscInt n,i; 137266ed3db0SBarry Smith 137366ed3db0SBarry Smith PetscFunctionBegin; 137466ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 13753649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 13761ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 137766ed3db0SBarry Smith for (i=0; i<m; i++) { 1378bfec09a0SHong Zhang idx = a->j + a->i[i]; 1379bfec09a0SHong Zhang v = a->a + a->i[i]; 138066ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 138166ed3db0SBarry Smith alpha1 = x[8*i]; 138266ed3db0SBarry Smith alpha2 = x[8*i+1]; 138366ed3db0SBarry Smith alpha3 = x[8*i+2]; 138466ed3db0SBarry Smith alpha4 = x[8*i+3]; 138566ed3db0SBarry Smith alpha5 = x[8*i+4]; 138666ed3db0SBarry Smith alpha6 = x[8*i+5]; 138766ed3db0SBarry Smith alpha7 = x[8*i+6]; 138866ed3db0SBarry Smith alpha8 = x[8*i+7]; 138966ed3db0SBarry Smith while (n-->0) { 139066ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 139166ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 139266ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 139366ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 139466ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 139566ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 139666ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 139766ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 139866ed3db0SBarry Smith idx++; v++; 139966ed3db0SBarry Smith } 140066ed3db0SBarry Smith } 1401dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz);CHKERRQ(ierr); 14023649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 14031ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 14042f7816d4SBarry Smith PetscFunctionReturn(0); 14052f7816d4SBarry Smith } 14062f7816d4SBarry Smith 14072b692628SMatthew Knepley /* ------------------------------------------------------------------------------*/ 1408dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 14092b692628SMatthew Knepley { 14102b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 14112b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1412d2840e09SBarry Smith const PetscScalar *x,*v; 1413d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1414dfbe8321SBarry Smith PetscErrorCode ierr; 1415d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1416d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 14172b692628SMatthew Knepley 14182b692628SMatthew Knepley PetscFunctionBegin; 14193649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 14201ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 14212b692628SMatthew Knepley idx = a->j; 14222b692628SMatthew Knepley v = a->a; 14232b692628SMatthew Knepley ii = a->i; 14242b692628SMatthew Knepley 14252b692628SMatthew Knepley for (i=0; i<m; i++) { 14262b692628SMatthew Knepley jrow = ii[i]; 14272b692628SMatthew Knepley n = ii[i+1] - jrow; 14282b692628SMatthew Knepley sum1 = 0.0; 14292b692628SMatthew Knepley sum2 = 0.0; 14302b692628SMatthew Knepley sum3 = 0.0; 14312b692628SMatthew Knepley sum4 = 0.0; 14322b692628SMatthew Knepley sum5 = 0.0; 14332b692628SMatthew Knepley sum6 = 0.0; 14342b692628SMatthew Knepley sum7 = 0.0; 14352b692628SMatthew Knepley sum8 = 0.0; 14362b692628SMatthew Knepley sum9 = 0.0; 143726fbe8dcSKarl Rupp 1438b3c51c66SMatthew Knepley nonzerorow += (n>0); 14392b692628SMatthew Knepley for (j=0; j<n; j++) { 14402b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 14412b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 14422b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 14432b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 14442b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 14452b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 14462b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 14472b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 14482b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 14492b692628SMatthew Knepley jrow++; 14502b692628SMatthew Knepley } 14512b692628SMatthew Knepley y[9*i] = sum1; 14522b692628SMatthew Knepley y[9*i+1] = sum2; 14532b692628SMatthew Knepley y[9*i+2] = sum3; 14542b692628SMatthew Knepley y[9*i+3] = sum4; 14552b692628SMatthew Knepley y[9*i+4] = sum5; 14562b692628SMatthew Knepley y[9*i+5] = sum6; 14572b692628SMatthew Knepley y[9*i+6] = sum7; 14582b692628SMatthew Knepley y[9*i+7] = sum8; 14592b692628SMatthew Knepley y[9*i+8] = sum9; 14602b692628SMatthew Knepley } 14612b692628SMatthew Knepley 1462dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz - 9*nonzerorow);CHKERRQ(ierr); 14633649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 14641ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 14652b692628SMatthew Knepley PetscFunctionReturn(0); 14662b692628SMatthew Knepley } 14672b692628SMatthew Knepley 1468b9cda22cSBarry Smith /* ------------------------------------------------------------------------------*/ 1469b9cda22cSBarry Smith 1470dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 14712b692628SMatthew Knepley { 14722b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 14732b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1474d2840e09SBarry Smith const PetscScalar *x,*v; 1475d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9; 1476dfbe8321SBarry Smith PetscErrorCode ierr; 1477d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1478d2840e09SBarry Smith PetscInt n,i; 14792b692628SMatthew Knepley 14802b692628SMatthew Knepley PetscFunctionBegin; 1481d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 14823649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 14831ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 14842b692628SMatthew Knepley 14852b692628SMatthew Knepley for (i=0; i<m; i++) { 14862b692628SMatthew Knepley idx = a->j + a->i[i]; 14872b692628SMatthew Knepley v = a->a + a->i[i]; 14882b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 14892b692628SMatthew Knepley alpha1 = x[9*i]; 14902b692628SMatthew Knepley alpha2 = x[9*i+1]; 14912b692628SMatthew Knepley alpha3 = x[9*i+2]; 14922b692628SMatthew Knepley alpha4 = x[9*i+3]; 14932b692628SMatthew Knepley alpha5 = x[9*i+4]; 14942b692628SMatthew Knepley alpha6 = x[9*i+5]; 14952b692628SMatthew Knepley alpha7 = x[9*i+6]; 14962b692628SMatthew Knepley alpha8 = x[9*i+7]; 14972f6bd0c6SMatthew Knepley alpha9 = x[9*i+8]; 14982b692628SMatthew Knepley while (n-->0) { 14992b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 15002b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 15012b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 15022b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 15032b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 15042b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 15052b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 15062b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 15072b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 15082b692628SMatthew Knepley idx++; v++; 15092b692628SMatthew Knepley } 15102b692628SMatthew Knepley } 1511dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz);CHKERRQ(ierr); 15123649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 15131ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 15142b692628SMatthew Knepley PetscFunctionReturn(0); 15152b692628SMatthew Knepley } 15162b692628SMatthew Knepley 1517dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 15182b692628SMatthew Knepley { 15192b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15202b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1521d2840e09SBarry Smith const PetscScalar *x,*v; 1522d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1523dfbe8321SBarry Smith PetscErrorCode ierr; 1524d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1525b24ad042SBarry Smith PetscInt n,i,jrow,j; 15262b692628SMatthew Knepley 15272b692628SMatthew Knepley PetscFunctionBegin; 15282b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 15293649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 15301ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 15312b692628SMatthew Knepley idx = a->j; 15322b692628SMatthew Knepley v = a->a; 15332b692628SMatthew Knepley ii = a->i; 15342b692628SMatthew Knepley 15352b692628SMatthew Knepley for (i=0; i<m; i++) { 15362b692628SMatthew Knepley jrow = ii[i]; 15372b692628SMatthew Knepley n = ii[i+1] - jrow; 15382b692628SMatthew Knepley sum1 = 0.0; 15392b692628SMatthew Knepley sum2 = 0.0; 15402b692628SMatthew Knepley sum3 = 0.0; 15412b692628SMatthew Knepley sum4 = 0.0; 15422b692628SMatthew Knepley sum5 = 0.0; 15432b692628SMatthew Knepley sum6 = 0.0; 15442b692628SMatthew Knepley sum7 = 0.0; 15452b692628SMatthew Knepley sum8 = 0.0; 15462b692628SMatthew Knepley sum9 = 0.0; 15472b692628SMatthew Knepley for (j=0; j<n; j++) { 15482b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 15492b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 15502b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 15512b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 15522b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 15532b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 15542b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 15552b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 15562b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 15572b692628SMatthew Knepley jrow++; 15582b692628SMatthew Knepley } 15592b692628SMatthew Knepley y[9*i] += sum1; 15602b692628SMatthew Knepley y[9*i+1] += sum2; 15612b692628SMatthew Knepley y[9*i+2] += sum3; 15622b692628SMatthew Knepley y[9*i+3] += sum4; 15632b692628SMatthew Knepley y[9*i+4] += sum5; 15642b692628SMatthew Knepley y[9*i+5] += sum6; 15652b692628SMatthew Knepley y[9*i+6] += sum7; 15662b692628SMatthew Knepley y[9*i+7] += sum8; 15672b692628SMatthew Knepley y[9*i+8] += sum9; 15682b692628SMatthew Knepley } 15692b692628SMatthew Knepley 1570efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz);CHKERRQ(ierr); 15713649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 15721ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 15732b692628SMatthew Knepley PetscFunctionReturn(0); 15742b692628SMatthew Knepley } 15752b692628SMatthew Knepley 1576dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 15772b692628SMatthew Knepley { 15782b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15792b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1580d2840e09SBarry Smith const PetscScalar *x,*v; 1581d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9; 1582dfbe8321SBarry Smith PetscErrorCode ierr; 1583d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1584d2840e09SBarry Smith PetscInt n,i; 15852b692628SMatthew Knepley 15862b692628SMatthew Knepley PetscFunctionBegin; 15872b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 15883649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 15891ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 15902b692628SMatthew Knepley for (i=0; i<m; i++) { 15912b692628SMatthew Knepley idx = a->j + a->i[i]; 15922b692628SMatthew Knepley v = a->a + a->i[i]; 15932b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 15942b692628SMatthew Knepley alpha1 = x[9*i]; 15952b692628SMatthew Knepley alpha2 = x[9*i+1]; 15962b692628SMatthew Knepley alpha3 = x[9*i+2]; 15972b692628SMatthew Knepley alpha4 = x[9*i+3]; 15982b692628SMatthew Knepley alpha5 = x[9*i+4]; 15992b692628SMatthew Knepley alpha6 = x[9*i+5]; 16002b692628SMatthew Knepley alpha7 = x[9*i+6]; 16012b692628SMatthew Knepley alpha8 = x[9*i+7]; 16022b692628SMatthew Knepley alpha9 = x[9*i+8]; 16032b692628SMatthew Knepley while (n-->0) { 16042b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 16052b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 16062b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 16072b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 16082b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 16092b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 16102b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 16112b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 16122b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 16132b692628SMatthew Knepley idx++; v++; 16142b692628SMatthew Knepley } 16152b692628SMatthew Knepley } 1616dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz);CHKERRQ(ierr); 16173649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 16181ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 16192b692628SMatthew Knepley PetscFunctionReturn(0); 16202b692628SMatthew Knepley } 1621b9cda22cSBarry Smith PetscErrorCode MatMult_SeqMAIJ_10(Mat A,Vec xx,Vec yy) 1622b9cda22cSBarry Smith { 1623b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1624b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1625d2840e09SBarry Smith const PetscScalar *x,*v; 1626d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10; 1627b9cda22cSBarry Smith PetscErrorCode ierr; 1628d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1629d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 1630b9cda22cSBarry Smith 1631b9cda22cSBarry Smith PetscFunctionBegin; 16323649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1633b9cda22cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1634b9cda22cSBarry Smith idx = a->j; 1635b9cda22cSBarry Smith v = a->a; 1636b9cda22cSBarry Smith ii = a->i; 1637b9cda22cSBarry Smith 1638b9cda22cSBarry Smith for (i=0; i<m; i++) { 1639b9cda22cSBarry Smith jrow = ii[i]; 1640b9cda22cSBarry Smith n = ii[i+1] - jrow; 1641b9cda22cSBarry Smith sum1 = 0.0; 1642b9cda22cSBarry Smith sum2 = 0.0; 1643b9cda22cSBarry Smith sum3 = 0.0; 1644b9cda22cSBarry Smith sum4 = 0.0; 1645b9cda22cSBarry Smith sum5 = 0.0; 1646b9cda22cSBarry Smith sum6 = 0.0; 1647b9cda22cSBarry Smith sum7 = 0.0; 1648b9cda22cSBarry Smith sum8 = 0.0; 1649b9cda22cSBarry Smith sum9 = 0.0; 1650b9cda22cSBarry Smith sum10 = 0.0; 165126fbe8dcSKarl Rupp 1652b3c51c66SMatthew Knepley nonzerorow += (n>0); 1653b9cda22cSBarry Smith for (j=0; j<n; j++) { 1654b9cda22cSBarry Smith sum1 += v[jrow]*x[10*idx[jrow]]; 1655b9cda22cSBarry Smith sum2 += v[jrow]*x[10*idx[jrow]+1]; 1656b9cda22cSBarry Smith sum3 += v[jrow]*x[10*idx[jrow]+2]; 1657b9cda22cSBarry Smith sum4 += v[jrow]*x[10*idx[jrow]+3]; 1658b9cda22cSBarry Smith sum5 += v[jrow]*x[10*idx[jrow]+4]; 1659b9cda22cSBarry Smith sum6 += v[jrow]*x[10*idx[jrow]+5]; 1660b9cda22cSBarry Smith sum7 += v[jrow]*x[10*idx[jrow]+6]; 1661b9cda22cSBarry Smith sum8 += v[jrow]*x[10*idx[jrow]+7]; 1662b9cda22cSBarry Smith sum9 += v[jrow]*x[10*idx[jrow]+8]; 1663b9cda22cSBarry Smith sum10 += v[jrow]*x[10*idx[jrow]+9]; 1664b9cda22cSBarry Smith jrow++; 1665b9cda22cSBarry Smith } 1666b9cda22cSBarry Smith y[10*i] = sum1; 1667b9cda22cSBarry Smith y[10*i+1] = sum2; 1668b9cda22cSBarry Smith y[10*i+2] = sum3; 1669b9cda22cSBarry Smith y[10*i+3] = sum4; 1670b9cda22cSBarry Smith y[10*i+4] = sum5; 1671b9cda22cSBarry Smith y[10*i+5] = sum6; 1672b9cda22cSBarry Smith y[10*i+6] = sum7; 1673b9cda22cSBarry Smith y[10*i+7] = sum8; 1674b9cda22cSBarry Smith y[10*i+8] = sum9; 1675b9cda22cSBarry Smith y[10*i+9] = sum10; 1676b9cda22cSBarry Smith } 1677b9cda22cSBarry Smith 1678dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz - 10.0*nonzerorow);CHKERRQ(ierr); 16793649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1680b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1681b9cda22cSBarry Smith PetscFunctionReturn(0); 1682b9cda22cSBarry Smith } 1683b9cda22cSBarry Smith 1684b9cda22cSBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_10(Mat A,Vec xx,Vec yy,Vec zz) 1685b9cda22cSBarry Smith { 1686b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1687b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1688d2840e09SBarry Smith const PetscScalar *x,*v; 1689d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10; 1690b9cda22cSBarry Smith PetscErrorCode ierr; 1691d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1692b9cda22cSBarry Smith PetscInt n,i,jrow,j; 1693b9cda22cSBarry Smith 1694b9cda22cSBarry Smith PetscFunctionBegin; 1695b9cda22cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 16963649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1697b9cda22cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1698b9cda22cSBarry Smith idx = a->j; 1699b9cda22cSBarry Smith v = a->a; 1700b9cda22cSBarry Smith ii = a->i; 1701b9cda22cSBarry Smith 1702b9cda22cSBarry Smith for (i=0; i<m; i++) { 1703b9cda22cSBarry Smith jrow = ii[i]; 1704b9cda22cSBarry Smith n = ii[i+1] - jrow; 1705b9cda22cSBarry Smith sum1 = 0.0; 1706b9cda22cSBarry Smith sum2 = 0.0; 1707b9cda22cSBarry Smith sum3 = 0.0; 1708b9cda22cSBarry Smith sum4 = 0.0; 1709b9cda22cSBarry Smith sum5 = 0.0; 1710b9cda22cSBarry Smith sum6 = 0.0; 1711b9cda22cSBarry Smith sum7 = 0.0; 1712b9cda22cSBarry Smith sum8 = 0.0; 1713b9cda22cSBarry Smith sum9 = 0.0; 1714b9cda22cSBarry Smith sum10 = 0.0; 1715b9cda22cSBarry Smith for (j=0; j<n; j++) { 1716b9cda22cSBarry Smith sum1 += v[jrow]*x[10*idx[jrow]]; 1717b9cda22cSBarry Smith sum2 += v[jrow]*x[10*idx[jrow]+1]; 1718b9cda22cSBarry Smith sum3 += v[jrow]*x[10*idx[jrow]+2]; 1719b9cda22cSBarry Smith sum4 += v[jrow]*x[10*idx[jrow]+3]; 1720b9cda22cSBarry Smith sum5 += v[jrow]*x[10*idx[jrow]+4]; 1721b9cda22cSBarry Smith sum6 += v[jrow]*x[10*idx[jrow]+5]; 1722b9cda22cSBarry Smith sum7 += v[jrow]*x[10*idx[jrow]+6]; 1723b9cda22cSBarry Smith sum8 += v[jrow]*x[10*idx[jrow]+7]; 1724b9cda22cSBarry Smith sum9 += v[jrow]*x[10*idx[jrow]+8]; 1725b9cda22cSBarry Smith sum10 += v[jrow]*x[10*idx[jrow]+9]; 1726b9cda22cSBarry Smith jrow++; 1727b9cda22cSBarry Smith } 1728b9cda22cSBarry Smith y[10*i] += sum1; 1729b9cda22cSBarry Smith y[10*i+1] += sum2; 1730b9cda22cSBarry Smith y[10*i+2] += sum3; 1731b9cda22cSBarry Smith y[10*i+3] += sum4; 1732b9cda22cSBarry Smith y[10*i+4] += sum5; 1733b9cda22cSBarry Smith y[10*i+5] += sum6; 1734b9cda22cSBarry Smith y[10*i+6] += sum7; 1735b9cda22cSBarry Smith y[10*i+7] += sum8; 1736b9cda22cSBarry Smith y[10*i+8] += sum9; 1737b9cda22cSBarry Smith y[10*i+9] += sum10; 1738b9cda22cSBarry Smith } 1739b9cda22cSBarry Smith 1740dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz);CHKERRQ(ierr); 17413649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1742b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1743b9cda22cSBarry Smith PetscFunctionReturn(0); 1744b9cda22cSBarry Smith } 1745b9cda22cSBarry Smith 1746b9cda22cSBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_10(Mat A,Vec xx,Vec yy) 1747b9cda22cSBarry Smith { 1748b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1749b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1750d2840e09SBarry Smith const PetscScalar *x,*v; 1751d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10; 1752b9cda22cSBarry Smith PetscErrorCode ierr; 1753d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1754d2840e09SBarry Smith PetscInt n,i; 1755b9cda22cSBarry Smith 1756b9cda22cSBarry Smith PetscFunctionBegin; 1757d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 17583649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1759b9cda22cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1760b9cda22cSBarry Smith 1761b9cda22cSBarry Smith for (i=0; i<m; i++) { 1762b9cda22cSBarry Smith idx = a->j + a->i[i]; 1763b9cda22cSBarry Smith v = a->a + a->i[i]; 1764b9cda22cSBarry Smith n = a->i[i+1] - a->i[i]; 1765e29fdc22SBarry Smith alpha1 = x[10*i]; 1766e29fdc22SBarry Smith alpha2 = x[10*i+1]; 1767e29fdc22SBarry Smith alpha3 = x[10*i+2]; 1768e29fdc22SBarry Smith alpha4 = x[10*i+3]; 1769e29fdc22SBarry Smith alpha5 = x[10*i+4]; 1770e29fdc22SBarry Smith alpha6 = x[10*i+5]; 1771e29fdc22SBarry Smith alpha7 = x[10*i+6]; 1772e29fdc22SBarry Smith alpha8 = x[10*i+7]; 1773e29fdc22SBarry Smith alpha9 = x[10*i+8]; 1774b9cda22cSBarry Smith alpha10 = x[10*i+9]; 1775b9cda22cSBarry Smith while (n-->0) { 1776e29fdc22SBarry Smith y[10*(*idx)] += alpha1*(*v); 1777e29fdc22SBarry Smith y[10*(*idx)+1] += alpha2*(*v); 1778e29fdc22SBarry Smith y[10*(*idx)+2] += alpha3*(*v); 1779e29fdc22SBarry Smith y[10*(*idx)+3] += alpha4*(*v); 1780e29fdc22SBarry Smith y[10*(*idx)+4] += alpha5*(*v); 1781e29fdc22SBarry Smith y[10*(*idx)+5] += alpha6*(*v); 1782e29fdc22SBarry Smith y[10*(*idx)+6] += alpha7*(*v); 1783e29fdc22SBarry Smith y[10*(*idx)+7] += alpha8*(*v); 1784e29fdc22SBarry Smith y[10*(*idx)+8] += alpha9*(*v); 1785b9cda22cSBarry Smith y[10*(*idx)+9] += alpha10*(*v); 1786b9cda22cSBarry Smith idx++; v++; 1787b9cda22cSBarry Smith } 1788b9cda22cSBarry Smith } 1789dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz);CHKERRQ(ierr); 17903649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1791b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1792b9cda22cSBarry Smith PetscFunctionReturn(0); 1793b9cda22cSBarry Smith } 1794b9cda22cSBarry Smith 1795b9cda22cSBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_10(Mat A,Vec xx,Vec yy,Vec zz) 1796b9cda22cSBarry Smith { 1797b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1798b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1799d2840e09SBarry Smith const PetscScalar *x,*v; 1800d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10; 1801b9cda22cSBarry Smith PetscErrorCode ierr; 1802d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1803d2840e09SBarry Smith PetscInt n,i; 1804b9cda22cSBarry Smith 1805b9cda22cSBarry Smith PetscFunctionBegin; 1806b9cda22cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 18073649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1808b9cda22cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1809b9cda22cSBarry Smith for (i=0; i<m; i++) { 1810b9cda22cSBarry Smith idx = a->j + a->i[i]; 1811b9cda22cSBarry Smith v = a->a + a->i[i]; 1812b9cda22cSBarry Smith n = a->i[i+1] - a->i[i]; 1813b9cda22cSBarry Smith alpha1 = x[10*i]; 1814b9cda22cSBarry Smith alpha2 = x[10*i+1]; 1815b9cda22cSBarry Smith alpha3 = x[10*i+2]; 1816b9cda22cSBarry Smith alpha4 = x[10*i+3]; 1817b9cda22cSBarry Smith alpha5 = x[10*i+4]; 1818b9cda22cSBarry Smith alpha6 = x[10*i+5]; 1819b9cda22cSBarry Smith alpha7 = x[10*i+6]; 1820b9cda22cSBarry Smith alpha8 = x[10*i+7]; 1821b9cda22cSBarry Smith alpha9 = x[10*i+8]; 1822b9cda22cSBarry Smith alpha10 = x[10*i+9]; 1823b9cda22cSBarry Smith while (n-->0) { 1824b9cda22cSBarry Smith y[10*(*idx)] += alpha1*(*v); 1825b9cda22cSBarry Smith y[10*(*idx)+1] += alpha2*(*v); 1826b9cda22cSBarry Smith y[10*(*idx)+2] += alpha3*(*v); 1827b9cda22cSBarry Smith y[10*(*idx)+3] += alpha4*(*v); 1828b9cda22cSBarry Smith y[10*(*idx)+4] += alpha5*(*v); 1829b9cda22cSBarry Smith y[10*(*idx)+5] += alpha6*(*v); 1830b9cda22cSBarry Smith y[10*(*idx)+6] += alpha7*(*v); 1831b9cda22cSBarry Smith y[10*(*idx)+7] += alpha8*(*v); 1832b9cda22cSBarry Smith y[10*(*idx)+8] += alpha9*(*v); 1833b9cda22cSBarry Smith y[10*(*idx)+9] += alpha10*(*v); 1834b9cda22cSBarry Smith idx++; v++; 1835b9cda22cSBarry Smith } 1836b9cda22cSBarry Smith } 1837dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz);CHKERRQ(ierr); 18383649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1839b9cda22cSBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1840b9cda22cSBarry Smith PetscFunctionReturn(0); 1841b9cda22cSBarry Smith } 1842b9cda22cSBarry Smith 18432b692628SMatthew Knepley 18442f7816d4SBarry Smith /*--------------------------------------------------------------------------------------------*/ 1845dbdd7285SBarry Smith PetscErrorCode MatMult_SeqMAIJ_11(Mat A,Vec xx,Vec yy) 1846dbdd7285SBarry Smith { 1847dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1848dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1849d2840e09SBarry Smith const PetscScalar *x,*v; 1850d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10, sum11; 1851dbdd7285SBarry Smith PetscErrorCode ierr; 1852d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1853d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 1854dbdd7285SBarry Smith 1855dbdd7285SBarry Smith PetscFunctionBegin; 18563649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1857dbdd7285SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1858dbdd7285SBarry Smith idx = a->j; 1859dbdd7285SBarry Smith v = a->a; 1860dbdd7285SBarry Smith ii = a->i; 1861dbdd7285SBarry Smith 1862dbdd7285SBarry Smith for (i=0; i<m; i++) { 1863dbdd7285SBarry Smith jrow = ii[i]; 1864dbdd7285SBarry Smith n = ii[i+1] - jrow; 1865dbdd7285SBarry Smith sum1 = 0.0; 1866dbdd7285SBarry Smith sum2 = 0.0; 1867dbdd7285SBarry Smith sum3 = 0.0; 1868dbdd7285SBarry Smith sum4 = 0.0; 1869dbdd7285SBarry Smith sum5 = 0.0; 1870dbdd7285SBarry Smith sum6 = 0.0; 1871dbdd7285SBarry Smith sum7 = 0.0; 1872dbdd7285SBarry Smith sum8 = 0.0; 1873dbdd7285SBarry Smith sum9 = 0.0; 1874dbdd7285SBarry Smith sum10 = 0.0; 1875dbdd7285SBarry Smith sum11 = 0.0; 187626fbe8dcSKarl Rupp 1877dbdd7285SBarry Smith nonzerorow += (n>0); 1878dbdd7285SBarry Smith for (j=0; j<n; j++) { 1879dbdd7285SBarry Smith sum1 += v[jrow]*x[11*idx[jrow]]; 1880dbdd7285SBarry Smith sum2 += v[jrow]*x[11*idx[jrow]+1]; 1881dbdd7285SBarry Smith sum3 += v[jrow]*x[11*idx[jrow]+2]; 1882dbdd7285SBarry Smith sum4 += v[jrow]*x[11*idx[jrow]+3]; 1883dbdd7285SBarry Smith sum5 += v[jrow]*x[11*idx[jrow]+4]; 1884dbdd7285SBarry Smith sum6 += v[jrow]*x[11*idx[jrow]+5]; 1885dbdd7285SBarry Smith sum7 += v[jrow]*x[11*idx[jrow]+6]; 1886dbdd7285SBarry Smith sum8 += v[jrow]*x[11*idx[jrow]+7]; 1887dbdd7285SBarry Smith sum9 += v[jrow]*x[11*idx[jrow]+8]; 1888dbdd7285SBarry Smith sum10 += v[jrow]*x[11*idx[jrow]+9]; 1889dbdd7285SBarry Smith sum11 += v[jrow]*x[11*idx[jrow]+10]; 1890dbdd7285SBarry Smith jrow++; 1891dbdd7285SBarry Smith } 1892dbdd7285SBarry Smith y[11*i] = sum1; 1893dbdd7285SBarry Smith y[11*i+1] = sum2; 1894dbdd7285SBarry Smith y[11*i+2] = sum3; 1895dbdd7285SBarry Smith y[11*i+3] = sum4; 1896dbdd7285SBarry Smith y[11*i+4] = sum5; 1897dbdd7285SBarry Smith y[11*i+5] = sum6; 1898dbdd7285SBarry Smith y[11*i+6] = sum7; 1899dbdd7285SBarry Smith y[11*i+7] = sum8; 1900dbdd7285SBarry Smith y[11*i+8] = sum9; 1901dbdd7285SBarry Smith y[11*i+9] = sum10; 1902dbdd7285SBarry Smith y[11*i+10] = sum11; 1903dbdd7285SBarry Smith } 1904dbdd7285SBarry Smith 1905dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz - 11*nonzerorow);CHKERRQ(ierr); 19063649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1907dbdd7285SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1908dbdd7285SBarry Smith PetscFunctionReturn(0); 1909dbdd7285SBarry Smith } 1910dbdd7285SBarry Smith 1911dbdd7285SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_11(Mat A,Vec xx,Vec yy,Vec zz) 1912dbdd7285SBarry Smith { 1913dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1914dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1915d2840e09SBarry Smith const PetscScalar *x,*v; 1916d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10, sum11; 1917dbdd7285SBarry Smith PetscErrorCode ierr; 1918d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1919dbdd7285SBarry Smith PetscInt n,i,jrow,j; 1920dbdd7285SBarry Smith 1921dbdd7285SBarry Smith PetscFunctionBegin; 1922dbdd7285SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 19233649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1924dbdd7285SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1925dbdd7285SBarry Smith idx = a->j; 1926dbdd7285SBarry Smith v = a->a; 1927dbdd7285SBarry Smith ii = a->i; 1928dbdd7285SBarry Smith 1929dbdd7285SBarry Smith for (i=0; i<m; i++) { 1930dbdd7285SBarry Smith jrow = ii[i]; 1931dbdd7285SBarry Smith n = ii[i+1] - jrow; 1932dbdd7285SBarry Smith sum1 = 0.0; 1933dbdd7285SBarry Smith sum2 = 0.0; 1934dbdd7285SBarry Smith sum3 = 0.0; 1935dbdd7285SBarry Smith sum4 = 0.0; 1936dbdd7285SBarry Smith sum5 = 0.0; 1937dbdd7285SBarry Smith sum6 = 0.0; 1938dbdd7285SBarry Smith sum7 = 0.0; 1939dbdd7285SBarry Smith sum8 = 0.0; 1940dbdd7285SBarry Smith sum9 = 0.0; 1941dbdd7285SBarry Smith sum10 = 0.0; 1942dbdd7285SBarry Smith sum11 = 0.0; 1943dbdd7285SBarry Smith for (j=0; j<n; j++) { 1944dbdd7285SBarry Smith sum1 += v[jrow]*x[11*idx[jrow]]; 1945dbdd7285SBarry Smith sum2 += v[jrow]*x[11*idx[jrow]+1]; 1946dbdd7285SBarry Smith sum3 += v[jrow]*x[11*idx[jrow]+2]; 1947dbdd7285SBarry Smith sum4 += v[jrow]*x[11*idx[jrow]+3]; 1948dbdd7285SBarry Smith sum5 += v[jrow]*x[11*idx[jrow]+4]; 1949dbdd7285SBarry Smith sum6 += v[jrow]*x[11*idx[jrow]+5]; 1950dbdd7285SBarry Smith sum7 += v[jrow]*x[11*idx[jrow]+6]; 1951dbdd7285SBarry Smith sum8 += v[jrow]*x[11*idx[jrow]+7]; 1952dbdd7285SBarry Smith sum9 += v[jrow]*x[11*idx[jrow]+8]; 1953dbdd7285SBarry Smith sum10 += v[jrow]*x[11*idx[jrow]+9]; 1954dbdd7285SBarry Smith sum11 += v[jrow]*x[11*idx[jrow]+10]; 1955dbdd7285SBarry Smith jrow++; 1956dbdd7285SBarry Smith } 1957dbdd7285SBarry Smith y[11*i] += sum1; 1958dbdd7285SBarry Smith y[11*i+1] += sum2; 1959dbdd7285SBarry Smith y[11*i+2] += sum3; 1960dbdd7285SBarry Smith y[11*i+3] += sum4; 1961dbdd7285SBarry Smith y[11*i+4] += sum5; 1962dbdd7285SBarry Smith y[11*i+5] += sum6; 1963dbdd7285SBarry Smith y[11*i+6] += sum7; 1964dbdd7285SBarry Smith y[11*i+7] += sum8; 1965dbdd7285SBarry Smith y[11*i+8] += sum9; 1966dbdd7285SBarry Smith y[11*i+9] += sum10; 1967dbdd7285SBarry Smith y[11*i+10] += sum11; 1968dbdd7285SBarry Smith } 1969dbdd7285SBarry Smith 1970dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz);CHKERRQ(ierr); 19713649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1972dbdd7285SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1973dbdd7285SBarry Smith PetscFunctionReturn(0); 1974dbdd7285SBarry Smith } 1975dbdd7285SBarry Smith 1976dbdd7285SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_11(Mat A,Vec xx,Vec yy) 1977dbdd7285SBarry Smith { 1978dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1979dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1980d2840e09SBarry Smith const PetscScalar *x,*v; 1981d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10,alpha11; 1982dbdd7285SBarry Smith PetscErrorCode ierr; 1983d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1984d2840e09SBarry Smith PetscInt n,i; 1985dbdd7285SBarry Smith 1986dbdd7285SBarry Smith PetscFunctionBegin; 1987d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 19883649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1989dbdd7285SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1990dbdd7285SBarry Smith 1991dbdd7285SBarry Smith for (i=0; i<m; i++) { 1992dbdd7285SBarry Smith idx = a->j + a->i[i]; 1993dbdd7285SBarry Smith v = a->a + a->i[i]; 1994dbdd7285SBarry Smith n = a->i[i+1] - a->i[i]; 1995dbdd7285SBarry Smith alpha1 = x[11*i]; 1996dbdd7285SBarry Smith alpha2 = x[11*i+1]; 1997dbdd7285SBarry Smith alpha3 = x[11*i+2]; 1998dbdd7285SBarry Smith alpha4 = x[11*i+3]; 1999dbdd7285SBarry Smith alpha5 = x[11*i+4]; 2000dbdd7285SBarry Smith alpha6 = x[11*i+5]; 2001dbdd7285SBarry Smith alpha7 = x[11*i+6]; 2002dbdd7285SBarry Smith alpha8 = x[11*i+7]; 2003dbdd7285SBarry Smith alpha9 = x[11*i+8]; 2004dbdd7285SBarry Smith alpha10 = x[11*i+9]; 2005dbdd7285SBarry Smith alpha11 = x[11*i+10]; 2006dbdd7285SBarry Smith while (n-->0) { 2007dbdd7285SBarry Smith y[11*(*idx)] += alpha1*(*v); 2008dbdd7285SBarry Smith y[11*(*idx)+1] += alpha2*(*v); 2009dbdd7285SBarry Smith y[11*(*idx)+2] += alpha3*(*v); 2010dbdd7285SBarry Smith y[11*(*idx)+3] += alpha4*(*v); 2011dbdd7285SBarry Smith y[11*(*idx)+4] += alpha5*(*v); 2012dbdd7285SBarry Smith y[11*(*idx)+5] += alpha6*(*v); 2013dbdd7285SBarry Smith y[11*(*idx)+6] += alpha7*(*v); 2014dbdd7285SBarry Smith y[11*(*idx)+7] += alpha8*(*v); 2015dbdd7285SBarry Smith y[11*(*idx)+8] += alpha9*(*v); 2016dbdd7285SBarry Smith y[11*(*idx)+9] += alpha10*(*v); 2017dbdd7285SBarry Smith y[11*(*idx)+10] += alpha11*(*v); 2018dbdd7285SBarry Smith idx++; v++; 2019dbdd7285SBarry Smith } 2020dbdd7285SBarry Smith } 2021dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz);CHKERRQ(ierr); 20223649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2023dbdd7285SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 2024dbdd7285SBarry Smith PetscFunctionReturn(0); 2025dbdd7285SBarry Smith } 2026dbdd7285SBarry Smith 2027dbdd7285SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_11(Mat A,Vec xx,Vec yy,Vec zz) 2028dbdd7285SBarry Smith { 2029dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2030dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2031d2840e09SBarry Smith const PetscScalar *x,*v; 2032d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10,alpha11; 2033dbdd7285SBarry Smith PetscErrorCode ierr; 2034d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2035d2840e09SBarry Smith PetscInt n,i; 2036dbdd7285SBarry Smith 2037dbdd7285SBarry Smith PetscFunctionBegin; 2038dbdd7285SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 20393649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2040dbdd7285SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 2041dbdd7285SBarry Smith for (i=0; i<m; i++) { 2042dbdd7285SBarry Smith idx = a->j + a->i[i]; 2043dbdd7285SBarry Smith v = a->a + a->i[i]; 2044dbdd7285SBarry Smith n = a->i[i+1] - a->i[i]; 2045dbdd7285SBarry Smith alpha1 = x[11*i]; 2046dbdd7285SBarry Smith alpha2 = x[11*i+1]; 2047dbdd7285SBarry Smith alpha3 = x[11*i+2]; 2048dbdd7285SBarry Smith alpha4 = x[11*i+3]; 2049dbdd7285SBarry Smith alpha5 = x[11*i+4]; 2050dbdd7285SBarry Smith alpha6 = x[11*i+5]; 2051dbdd7285SBarry Smith alpha7 = x[11*i+6]; 2052dbdd7285SBarry Smith alpha8 = x[11*i+7]; 2053dbdd7285SBarry Smith alpha9 = x[11*i+8]; 2054dbdd7285SBarry Smith alpha10 = x[11*i+9]; 2055dbdd7285SBarry Smith alpha11 = x[11*i+10]; 2056dbdd7285SBarry Smith while (n-->0) { 2057dbdd7285SBarry Smith y[11*(*idx)] += alpha1*(*v); 2058dbdd7285SBarry Smith y[11*(*idx)+1] += alpha2*(*v); 2059dbdd7285SBarry Smith y[11*(*idx)+2] += alpha3*(*v); 2060dbdd7285SBarry Smith y[11*(*idx)+3] += alpha4*(*v); 2061dbdd7285SBarry Smith y[11*(*idx)+4] += alpha5*(*v); 2062dbdd7285SBarry Smith y[11*(*idx)+5] += alpha6*(*v); 2063dbdd7285SBarry Smith y[11*(*idx)+6] += alpha7*(*v); 2064dbdd7285SBarry Smith y[11*(*idx)+7] += alpha8*(*v); 2065dbdd7285SBarry Smith y[11*(*idx)+8] += alpha9*(*v); 2066dbdd7285SBarry Smith y[11*(*idx)+9] += alpha10*(*v); 2067dbdd7285SBarry Smith y[11*(*idx)+10] += alpha11*(*v); 2068dbdd7285SBarry Smith idx++; v++; 2069dbdd7285SBarry Smith } 2070dbdd7285SBarry Smith } 2071dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz);CHKERRQ(ierr); 20723649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2073dbdd7285SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 2074dbdd7285SBarry Smith PetscFunctionReturn(0); 2075dbdd7285SBarry Smith } 2076dbdd7285SBarry Smith 2077dbdd7285SBarry Smith 2078dbdd7285SBarry Smith /*--------------------------------------------------------------------------------------------*/ 2079dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 20802f7816d4SBarry Smith { 20812f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 20822f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2083d2840e09SBarry Smith const PetscScalar *x,*v; 2084d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 20852f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 2086dfbe8321SBarry Smith PetscErrorCode ierr; 2087d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2088d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 20892f7816d4SBarry Smith 20902f7816d4SBarry Smith PetscFunctionBegin; 20913649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 20921ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 20932f7816d4SBarry Smith idx = a->j; 20942f7816d4SBarry Smith v = a->a; 20952f7816d4SBarry Smith ii = a->i; 20962f7816d4SBarry Smith 20972f7816d4SBarry Smith for (i=0; i<m; i++) { 20982f7816d4SBarry Smith jrow = ii[i]; 20992f7816d4SBarry Smith n = ii[i+1] - jrow; 21002f7816d4SBarry Smith sum1 = 0.0; 21012f7816d4SBarry Smith sum2 = 0.0; 21022f7816d4SBarry Smith sum3 = 0.0; 21032f7816d4SBarry Smith sum4 = 0.0; 21042f7816d4SBarry Smith sum5 = 0.0; 21052f7816d4SBarry Smith sum6 = 0.0; 21062f7816d4SBarry Smith sum7 = 0.0; 21072f7816d4SBarry Smith sum8 = 0.0; 21082f7816d4SBarry Smith sum9 = 0.0; 21092f7816d4SBarry Smith sum10 = 0.0; 21102f7816d4SBarry Smith sum11 = 0.0; 21112f7816d4SBarry Smith sum12 = 0.0; 21122f7816d4SBarry Smith sum13 = 0.0; 21132f7816d4SBarry Smith sum14 = 0.0; 21142f7816d4SBarry Smith sum15 = 0.0; 21152f7816d4SBarry Smith sum16 = 0.0; 211626fbe8dcSKarl Rupp 2117b3c51c66SMatthew Knepley nonzerorow += (n>0); 21182f7816d4SBarry Smith for (j=0; j<n; j++) { 21192f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 21202f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 21212f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 21222f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 21232f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 21242f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 21252f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 21262f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 21272f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 21282f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 21292f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 21302f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 21312f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 21322f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 21332f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 21342f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 21352f7816d4SBarry Smith jrow++; 21362f7816d4SBarry Smith } 21372f7816d4SBarry Smith y[16*i] = sum1; 21382f7816d4SBarry Smith y[16*i+1] = sum2; 21392f7816d4SBarry Smith y[16*i+2] = sum3; 21402f7816d4SBarry Smith y[16*i+3] = sum4; 21412f7816d4SBarry Smith y[16*i+4] = sum5; 21422f7816d4SBarry Smith y[16*i+5] = sum6; 21432f7816d4SBarry Smith y[16*i+6] = sum7; 21442f7816d4SBarry Smith y[16*i+7] = sum8; 21452f7816d4SBarry Smith y[16*i+8] = sum9; 21462f7816d4SBarry Smith y[16*i+9] = sum10; 21472f7816d4SBarry Smith y[16*i+10] = sum11; 21482f7816d4SBarry Smith y[16*i+11] = sum12; 21492f7816d4SBarry Smith y[16*i+12] = sum13; 21502f7816d4SBarry Smith y[16*i+13] = sum14; 21512f7816d4SBarry Smith y[16*i+14] = sum15; 21522f7816d4SBarry Smith y[16*i+15] = sum16; 21532f7816d4SBarry Smith } 21542f7816d4SBarry Smith 2155dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz - 16.0*nonzerorow);CHKERRQ(ierr); 21563649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 21571ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 21582f7816d4SBarry Smith PetscFunctionReturn(0); 21592f7816d4SBarry Smith } 21602f7816d4SBarry Smith 2161dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 21622f7816d4SBarry Smith { 21632f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 21642f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2165d2840e09SBarry Smith const PetscScalar *x,*v; 2166d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 21672f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 2168dfbe8321SBarry Smith PetscErrorCode ierr; 2169d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2170d2840e09SBarry Smith PetscInt n,i; 21712f7816d4SBarry Smith 21722f7816d4SBarry Smith PetscFunctionBegin; 2173d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 21743649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 21751ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 2176bfec09a0SHong Zhang 21772f7816d4SBarry Smith for (i=0; i<m; i++) { 2178bfec09a0SHong Zhang idx = a->j + a->i[i]; 2179bfec09a0SHong Zhang v = a->a + a->i[i]; 21802f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 21812f7816d4SBarry Smith alpha1 = x[16*i]; 21822f7816d4SBarry Smith alpha2 = x[16*i+1]; 21832f7816d4SBarry Smith alpha3 = x[16*i+2]; 21842f7816d4SBarry Smith alpha4 = x[16*i+3]; 21852f7816d4SBarry Smith alpha5 = x[16*i+4]; 21862f7816d4SBarry Smith alpha6 = x[16*i+5]; 21872f7816d4SBarry Smith alpha7 = x[16*i+6]; 21882f7816d4SBarry Smith alpha8 = x[16*i+7]; 21892f7816d4SBarry Smith alpha9 = x[16*i+8]; 21902f7816d4SBarry Smith alpha10 = x[16*i+9]; 21912f7816d4SBarry Smith alpha11 = x[16*i+10]; 21922f7816d4SBarry Smith alpha12 = x[16*i+11]; 21932f7816d4SBarry Smith alpha13 = x[16*i+12]; 21942f7816d4SBarry Smith alpha14 = x[16*i+13]; 21952f7816d4SBarry Smith alpha15 = x[16*i+14]; 21962f7816d4SBarry Smith alpha16 = x[16*i+15]; 21972f7816d4SBarry Smith while (n-->0) { 21982f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 21992f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 22002f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 22012f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 22022f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 22032f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 22042f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 22052f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 22062f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 22072f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 22082f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 22092f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 22102f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 22112f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 22122f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 22132f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 22142f7816d4SBarry Smith idx++; v++; 22152f7816d4SBarry Smith } 22162f7816d4SBarry Smith } 2217dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 22183649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 22191ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 22202f7816d4SBarry Smith PetscFunctionReturn(0); 22212f7816d4SBarry Smith } 22222f7816d4SBarry Smith 2223dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 22242f7816d4SBarry Smith { 22252f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 22262f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2227d2840e09SBarry Smith const PetscScalar *x,*v; 2228d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 22292f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 2230dfbe8321SBarry Smith PetscErrorCode ierr; 2231d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2232b24ad042SBarry Smith PetscInt n,i,jrow,j; 22332f7816d4SBarry Smith 22342f7816d4SBarry Smith PetscFunctionBegin; 22352f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 22363649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 22371ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 22382f7816d4SBarry Smith idx = a->j; 22392f7816d4SBarry Smith v = a->a; 22402f7816d4SBarry Smith ii = a->i; 22412f7816d4SBarry Smith 22422f7816d4SBarry Smith for (i=0; i<m; i++) { 22432f7816d4SBarry Smith jrow = ii[i]; 22442f7816d4SBarry Smith n = ii[i+1] - jrow; 22452f7816d4SBarry Smith sum1 = 0.0; 22462f7816d4SBarry Smith sum2 = 0.0; 22472f7816d4SBarry Smith sum3 = 0.0; 22482f7816d4SBarry Smith sum4 = 0.0; 22492f7816d4SBarry Smith sum5 = 0.0; 22502f7816d4SBarry Smith sum6 = 0.0; 22512f7816d4SBarry Smith sum7 = 0.0; 22522f7816d4SBarry Smith sum8 = 0.0; 22532f7816d4SBarry Smith sum9 = 0.0; 22542f7816d4SBarry Smith sum10 = 0.0; 22552f7816d4SBarry Smith sum11 = 0.0; 22562f7816d4SBarry Smith sum12 = 0.0; 22572f7816d4SBarry Smith sum13 = 0.0; 22582f7816d4SBarry Smith sum14 = 0.0; 22592f7816d4SBarry Smith sum15 = 0.0; 22602f7816d4SBarry Smith sum16 = 0.0; 22612f7816d4SBarry Smith for (j=0; j<n; j++) { 22622f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 22632f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 22642f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 22652f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 22662f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 22672f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 22682f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 22692f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 22702f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 22712f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 22722f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 22732f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 22742f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 22752f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 22762f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 22772f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 22782f7816d4SBarry Smith jrow++; 22792f7816d4SBarry Smith } 22802f7816d4SBarry Smith y[16*i] += sum1; 22812f7816d4SBarry Smith y[16*i+1] += sum2; 22822f7816d4SBarry Smith y[16*i+2] += sum3; 22832f7816d4SBarry Smith y[16*i+3] += sum4; 22842f7816d4SBarry Smith y[16*i+4] += sum5; 22852f7816d4SBarry Smith y[16*i+5] += sum6; 22862f7816d4SBarry Smith y[16*i+6] += sum7; 22872f7816d4SBarry Smith y[16*i+7] += sum8; 22882f7816d4SBarry Smith y[16*i+8] += sum9; 22892f7816d4SBarry Smith y[16*i+9] += sum10; 22902f7816d4SBarry Smith y[16*i+10] += sum11; 22912f7816d4SBarry Smith y[16*i+11] += sum12; 22922f7816d4SBarry Smith y[16*i+12] += sum13; 22932f7816d4SBarry Smith y[16*i+13] += sum14; 22942f7816d4SBarry Smith y[16*i+14] += sum15; 22952f7816d4SBarry Smith y[16*i+15] += sum16; 22962f7816d4SBarry Smith } 22972f7816d4SBarry Smith 2298dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 22993649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 23001ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 23012f7816d4SBarry Smith PetscFunctionReturn(0); 23022f7816d4SBarry Smith } 23032f7816d4SBarry Smith 2304dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 23052f7816d4SBarry Smith { 23062f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 23072f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2308d2840e09SBarry Smith const PetscScalar *x,*v; 2309d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 23102f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 2311dfbe8321SBarry Smith PetscErrorCode ierr; 2312d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2313d2840e09SBarry Smith PetscInt n,i; 23142f7816d4SBarry Smith 23152f7816d4SBarry Smith PetscFunctionBegin; 23162f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 23173649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 23181ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 23192f7816d4SBarry Smith for (i=0; i<m; i++) { 2320bfec09a0SHong Zhang idx = a->j + a->i[i]; 2321bfec09a0SHong Zhang v = a->a + a->i[i]; 23222f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 23232f7816d4SBarry Smith alpha1 = x[16*i]; 23242f7816d4SBarry Smith alpha2 = x[16*i+1]; 23252f7816d4SBarry Smith alpha3 = x[16*i+2]; 23262f7816d4SBarry Smith alpha4 = x[16*i+3]; 23272f7816d4SBarry Smith alpha5 = x[16*i+4]; 23282f7816d4SBarry Smith alpha6 = x[16*i+5]; 23292f7816d4SBarry Smith alpha7 = x[16*i+6]; 23302f7816d4SBarry Smith alpha8 = x[16*i+7]; 23312f7816d4SBarry Smith alpha9 = x[16*i+8]; 23322f7816d4SBarry Smith alpha10 = x[16*i+9]; 23332f7816d4SBarry Smith alpha11 = x[16*i+10]; 23342f7816d4SBarry Smith alpha12 = x[16*i+11]; 23352f7816d4SBarry Smith alpha13 = x[16*i+12]; 23362f7816d4SBarry Smith alpha14 = x[16*i+13]; 23372f7816d4SBarry Smith alpha15 = x[16*i+14]; 23382f7816d4SBarry Smith alpha16 = x[16*i+15]; 23392f7816d4SBarry Smith while (n-->0) { 23402f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 23412f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 23422f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 23432f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 23442f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 23452f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 23462f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 23472f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 23482f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 23492f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 23502f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 23512f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 23522f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 23532f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 23542f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 23552f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 23562f7816d4SBarry Smith idx++; v++; 23572f7816d4SBarry Smith } 23582f7816d4SBarry Smith } 2359dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 23603649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 23611ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 236266ed3db0SBarry Smith PetscFunctionReturn(0); 236366ed3db0SBarry Smith } 236466ed3db0SBarry Smith 2365ed1c418cSBarry Smith /*--------------------------------------------------------------------------------------------*/ 2366ed1c418cSBarry Smith PetscErrorCode MatMult_SeqMAIJ_18(Mat A,Vec xx,Vec yy) 2367ed1c418cSBarry Smith { 2368ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2369ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2370d2840e09SBarry Smith const PetscScalar *x,*v; 2371d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 2372ed1c418cSBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16, sum17, sum18; 2373ed1c418cSBarry Smith PetscErrorCode ierr; 2374d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2375d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 2376ed1c418cSBarry Smith 2377ed1c418cSBarry Smith PetscFunctionBegin; 23783649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2379ed1c418cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 2380ed1c418cSBarry Smith idx = a->j; 2381ed1c418cSBarry Smith v = a->a; 2382ed1c418cSBarry Smith ii = a->i; 2383ed1c418cSBarry Smith 2384ed1c418cSBarry Smith for (i=0; i<m; i++) { 2385ed1c418cSBarry Smith jrow = ii[i]; 2386ed1c418cSBarry Smith n = ii[i+1] - jrow; 2387ed1c418cSBarry Smith sum1 = 0.0; 2388ed1c418cSBarry Smith sum2 = 0.0; 2389ed1c418cSBarry Smith sum3 = 0.0; 2390ed1c418cSBarry Smith sum4 = 0.0; 2391ed1c418cSBarry Smith sum5 = 0.0; 2392ed1c418cSBarry Smith sum6 = 0.0; 2393ed1c418cSBarry Smith sum7 = 0.0; 2394ed1c418cSBarry Smith sum8 = 0.0; 2395ed1c418cSBarry Smith sum9 = 0.0; 2396ed1c418cSBarry Smith sum10 = 0.0; 2397ed1c418cSBarry Smith sum11 = 0.0; 2398ed1c418cSBarry Smith sum12 = 0.0; 2399ed1c418cSBarry Smith sum13 = 0.0; 2400ed1c418cSBarry Smith sum14 = 0.0; 2401ed1c418cSBarry Smith sum15 = 0.0; 2402ed1c418cSBarry Smith sum16 = 0.0; 2403ed1c418cSBarry Smith sum17 = 0.0; 2404ed1c418cSBarry Smith sum18 = 0.0; 240526fbe8dcSKarl Rupp 2406ed1c418cSBarry Smith nonzerorow += (n>0); 2407ed1c418cSBarry Smith for (j=0; j<n; j++) { 2408ed1c418cSBarry Smith sum1 += v[jrow]*x[18*idx[jrow]]; 2409ed1c418cSBarry Smith sum2 += v[jrow]*x[18*idx[jrow]+1]; 2410ed1c418cSBarry Smith sum3 += v[jrow]*x[18*idx[jrow]+2]; 2411ed1c418cSBarry Smith sum4 += v[jrow]*x[18*idx[jrow]+3]; 2412ed1c418cSBarry Smith sum5 += v[jrow]*x[18*idx[jrow]+4]; 2413ed1c418cSBarry Smith sum6 += v[jrow]*x[18*idx[jrow]+5]; 2414ed1c418cSBarry Smith sum7 += v[jrow]*x[18*idx[jrow]+6]; 2415ed1c418cSBarry Smith sum8 += v[jrow]*x[18*idx[jrow]+7]; 2416ed1c418cSBarry Smith sum9 += v[jrow]*x[18*idx[jrow]+8]; 2417ed1c418cSBarry Smith sum10 += v[jrow]*x[18*idx[jrow]+9]; 2418ed1c418cSBarry Smith sum11 += v[jrow]*x[18*idx[jrow]+10]; 2419ed1c418cSBarry Smith sum12 += v[jrow]*x[18*idx[jrow]+11]; 2420ed1c418cSBarry Smith sum13 += v[jrow]*x[18*idx[jrow]+12]; 2421ed1c418cSBarry Smith sum14 += v[jrow]*x[18*idx[jrow]+13]; 2422ed1c418cSBarry Smith sum15 += v[jrow]*x[18*idx[jrow]+14]; 2423ed1c418cSBarry Smith sum16 += v[jrow]*x[18*idx[jrow]+15]; 2424ed1c418cSBarry Smith sum17 += v[jrow]*x[18*idx[jrow]+16]; 2425ed1c418cSBarry Smith sum18 += v[jrow]*x[18*idx[jrow]+17]; 2426ed1c418cSBarry Smith jrow++; 2427ed1c418cSBarry Smith } 2428ed1c418cSBarry Smith y[18*i] = sum1; 2429ed1c418cSBarry Smith y[18*i+1] = sum2; 2430ed1c418cSBarry Smith y[18*i+2] = sum3; 2431ed1c418cSBarry Smith y[18*i+3] = sum4; 2432ed1c418cSBarry Smith y[18*i+4] = sum5; 2433ed1c418cSBarry Smith y[18*i+5] = sum6; 2434ed1c418cSBarry Smith y[18*i+6] = sum7; 2435ed1c418cSBarry Smith y[18*i+7] = sum8; 2436ed1c418cSBarry Smith y[18*i+8] = sum9; 2437ed1c418cSBarry Smith y[18*i+9] = sum10; 2438ed1c418cSBarry Smith y[18*i+10] = sum11; 2439ed1c418cSBarry Smith y[18*i+11] = sum12; 2440ed1c418cSBarry Smith y[18*i+12] = sum13; 2441ed1c418cSBarry Smith y[18*i+13] = sum14; 2442ed1c418cSBarry Smith y[18*i+14] = sum15; 2443ed1c418cSBarry Smith y[18*i+15] = sum16; 2444ed1c418cSBarry Smith y[18*i+16] = sum17; 2445ed1c418cSBarry Smith y[18*i+17] = sum18; 2446ed1c418cSBarry Smith } 2447ed1c418cSBarry Smith 2448dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz - 18.0*nonzerorow);CHKERRQ(ierr); 24493649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2450ed1c418cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 2451ed1c418cSBarry Smith PetscFunctionReturn(0); 2452ed1c418cSBarry Smith } 2453ed1c418cSBarry Smith 2454ed1c418cSBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_18(Mat A,Vec xx,Vec yy) 2455ed1c418cSBarry Smith { 2456ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2457ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2458d2840e09SBarry Smith const PetscScalar *x,*v; 2459d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 2460ed1c418cSBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16,alpha17,alpha18; 2461ed1c418cSBarry Smith PetscErrorCode ierr; 2462d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2463d2840e09SBarry Smith PetscInt n,i; 2464ed1c418cSBarry Smith 2465ed1c418cSBarry Smith PetscFunctionBegin; 2466d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 24673649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2468ed1c418cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 2469ed1c418cSBarry Smith 2470ed1c418cSBarry Smith for (i=0; i<m; i++) { 2471ed1c418cSBarry Smith idx = a->j + a->i[i]; 2472ed1c418cSBarry Smith v = a->a + a->i[i]; 2473ed1c418cSBarry Smith n = a->i[i+1] - a->i[i]; 2474ed1c418cSBarry Smith alpha1 = x[18*i]; 2475ed1c418cSBarry Smith alpha2 = x[18*i+1]; 2476ed1c418cSBarry Smith alpha3 = x[18*i+2]; 2477ed1c418cSBarry Smith alpha4 = x[18*i+3]; 2478ed1c418cSBarry Smith alpha5 = x[18*i+4]; 2479ed1c418cSBarry Smith alpha6 = x[18*i+5]; 2480ed1c418cSBarry Smith alpha7 = x[18*i+6]; 2481ed1c418cSBarry Smith alpha8 = x[18*i+7]; 2482ed1c418cSBarry Smith alpha9 = x[18*i+8]; 2483ed1c418cSBarry Smith alpha10 = x[18*i+9]; 2484ed1c418cSBarry Smith alpha11 = x[18*i+10]; 2485ed1c418cSBarry Smith alpha12 = x[18*i+11]; 2486ed1c418cSBarry Smith alpha13 = x[18*i+12]; 2487ed1c418cSBarry Smith alpha14 = x[18*i+13]; 2488ed1c418cSBarry Smith alpha15 = x[18*i+14]; 2489ed1c418cSBarry Smith alpha16 = x[18*i+15]; 2490ed1c418cSBarry Smith alpha17 = x[18*i+16]; 2491ed1c418cSBarry Smith alpha18 = x[18*i+17]; 2492ed1c418cSBarry Smith while (n-->0) { 2493ed1c418cSBarry Smith y[18*(*idx)] += alpha1*(*v); 2494ed1c418cSBarry Smith y[18*(*idx)+1] += alpha2*(*v); 2495ed1c418cSBarry Smith y[18*(*idx)+2] += alpha3*(*v); 2496ed1c418cSBarry Smith y[18*(*idx)+3] += alpha4*(*v); 2497ed1c418cSBarry Smith y[18*(*idx)+4] += alpha5*(*v); 2498ed1c418cSBarry Smith y[18*(*idx)+5] += alpha6*(*v); 2499ed1c418cSBarry Smith y[18*(*idx)+6] += alpha7*(*v); 2500ed1c418cSBarry Smith y[18*(*idx)+7] += alpha8*(*v); 2501ed1c418cSBarry Smith y[18*(*idx)+8] += alpha9*(*v); 2502ed1c418cSBarry Smith y[18*(*idx)+9] += alpha10*(*v); 2503ed1c418cSBarry Smith y[18*(*idx)+10] += alpha11*(*v); 2504ed1c418cSBarry Smith y[18*(*idx)+11] += alpha12*(*v); 2505ed1c418cSBarry Smith y[18*(*idx)+12] += alpha13*(*v); 2506ed1c418cSBarry Smith y[18*(*idx)+13] += alpha14*(*v); 2507ed1c418cSBarry Smith y[18*(*idx)+14] += alpha15*(*v); 2508ed1c418cSBarry Smith y[18*(*idx)+15] += alpha16*(*v); 2509ed1c418cSBarry Smith y[18*(*idx)+16] += alpha17*(*v); 2510ed1c418cSBarry Smith y[18*(*idx)+17] += alpha18*(*v); 2511ed1c418cSBarry Smith idx++; v++; 2512ed1c418cSBarry Smith } 2513ed1c418cSBarry Smith } 2514dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz);CHKERRQ(ierr); 25153649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2516ed1c418cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 2517ed1c418cSBarry Smith PetscFunctionReturn(0); 2518ed1c418cSBarry Smith } 2519ed1c418cSBarry Smith 2520ed1c418cSBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_18(Mat A,Vec xx,Vec yy,Vec zz) 2521ed1c418cSBarry Smith { 2522ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2523ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2524d2840e09SBarry Smith const PetscScalar *x,*v; 2525d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 2526ed1c418cSBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16, sum17, sum18; 2527ed1c418cSBarry Smith PetscErrorCode ierr; 2528d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2529ed1c418cSBarry Smith PetscInt n,i,jrow,j; 2530ed1c418cSBarry Smith 2531ed1c418cSBarry Smith PetscFunctionBegin; 2532ed1c418cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 25333649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2534ed1c418cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 2535ed1c418cSBarry Smith idx = a->j; 2536ed1c418cSBarry Smith v = a->a; 2537ed1c418cSBarry Smith ii = a->i; 2538ed1c418cSBarry Smith 2539ed1c418cSBarry Smith for (i=0; i<m; i++) { 2540ed1c418cSBarry Smith jrow = ii[i]; 2541ed1c418cSBarry Smith n = ii[i+1] - jrow; 2542ed1c418cSBarry Smith sum1 = 0.0; 2543ed1c418cSBarry Smith sum2 = 0.0; 2544ed1c418cSBarry Smith sum3 = 0.0; 2545ed1c418cSBarry Smith sum4 = 0.0; 2546ed1c418cSBarry Smith sum5 = 0.0; 2547ed1c418cSBarry Smith sum6 = 0.0; 2548ed1c418cSBarry Smith sum7 = 0.0; 2549ed1c418cSBarry Smith sum8 = 0.0; 2550ed1c418cSBarry Smith sum9 = 0.0; 2551ed1c418cSBarry Smith sum10 = 0.0; 2552ed1c418cSBarry Smith sum11 = 0.0; 2553ed1c418cSBarry Smith sum12 = 0.0; 2554ed1c418cSBarry Smith sum13 = 0.0; 2555ed1c418cSBarry Smith sum14 = 0.0; 2556ed1c418cSBarry Smith sum15 = 0.0; 2557ed1c418cSBarry Smith sum16 = 0.0; 2558ed1c418cSBarry Smith sum17 = 0.0; 2559ed1c418cSBarry Smith sum18 = 0.0; 2560ed1c418cSBarry Smith for (j=0; j<n; j++) { 2561ed1c418cSBarry Smith sum1 += v[jrow]*x[18*idx[jrow]]; 2562ed1c418cSBarry Smith sum2 += v[jrow]*x[18*idx[jrow]+1]; 2563ed1c418cSBarry Smith sum3 += v[jrow]*x[18*idx[jrow]+2]; 2564ed1c418cSBarry Smith sum4 += v[jrow]*x[18*idx[jrow]+3]; 2565ed1c418cSBarry Smith sum5 += v[jrow]*x[18*idx[jrow]+4]; 2566ed1c418cSBarry Smith sum6 += v[jrow]*x[18*idx[jrow]+5]; 2567ed1c418cSBarry Smith sum7 += v[jrow]*x[18*idx[jrow]+6]; 2568ed1c418cSBarry Smith sum8 += v[jrow]*x[18*idx[jrow]+7]; 2569ed1c418cSBarry Smith sum9 += v[jrow]*x[18*idx[jrow]+8]; 2570ed1c418cSBarry Smith sum10 += v[jrow]*x[18*idx[jrow]+9]; 2571ed1c418cSBarry Smith sum11 += v[jrow]*x[18*idx[jrow]+10]; 2572ed1c418cSBarry Smith sum12 += v[jrow]*x[18*idx[jrow]+11]; 2573ed1c418cSBarry Smith sum13 += v[jrow]*x[18*idx[jrow]+12]; 2574ed1c418cSBarry Smith sum14 += v[jrow]*x[18*idx[jrow]+13]; 2575ed1c418cSBarry Smith sum15 += v[jrow]*x[18*idx[jrow]+14]; 2576ed1c418cSBarry Smith sum16 += v[jrow]*x[18*idx[jrow]+15]; 2577ed1c418cSBarry Smith sum17 += v[jrow]*x[18*idx[jrow]+16]; 2578ed1c418cSBarry Smith sum18 += v[jrow]*x[18*idx[jrow]+17]; 2579ed1c418cSBarry Smith jrow++; 2580ed1c418cSBarry Smith } 2581ed1c418cSBarry Smith y[18*i] += sum1; 2582ed1c418cSBarry Smith y[18*i+1] += sum2; 2583ed1c418cSBarry Smith y[18*i+2] += sum3; 2584ed1c418cSBarry Smith y[18*i+3] += sum4; 2585ed1c418cSBarry Smith y[18*i+4] += sum5; 2586ed1c418cSBarry Smith y[18*i+5] += sum6; 2587ed1c418cSBarry Smith y[18*i+6] += sum7; 2588ed1c418cSBarry Smith y[18*i+7] += sum8; 2589ed1c418cSBarry Smith y[18*i+8] += sum9; 2590ed1c418cSBarry Smith y[18*i+9] += sum10; 2591ed1c418cSBarry Smith y[18*i+10] += sum11; 2592ed1c418cSBarry Smith y[18*i+11] += sum12; 2593ed1c418cSBarry Smith y[18*i+12] += sum13; 2594ed1c418cSBarry Smith y[18*i+13] += sum14; 2595ed1c418cSBarry Smith y[18*i+14] += sum15; 2596ed1c418cSBarry Smith y[18*i+15] += sum16; 2597ed1c418cSBarry Smith y[18*i+16] += sum17; 2598ed1c418cSBarry Smith y[18*i+17] += sum18; 2599ed1c418cSBarry Smith } 2600ed1c418cSBarry Smith 2601dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz);CHKERRQ(ierr); 26023649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2603ed1c418cSBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 2604ed1c418cSBarry Smith PetscFunctionReturn(0); 2605ed1c418cSBarry Smith } 2606ed1c418cSBarry Smith 2607ed1c418cSBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_18(Mat A,Vec xx,Vec yy,Vec zz) 2608ed1c418cSBarry Smith { 2609ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2610ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2611d2840e09SBarry Smith const PetscScalar *x,*v; 2612d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 2613ed1c418cSBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16,alpha17,alpha18; 2614ed1c418cSBarry Smith PetscErrorCode ierr; 2615d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2616d2840e09SBarry Smith PetscInt n,i; 2617ed1c418cSBarry Smith 2618ed1c418cSBarry Smith PetscFunctionBegin; 2619ed1c418cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 26203649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2621ed1c418cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 2622ed1c418cSBarry Smith for (i=0; i<m; i++) { 2623ed1c418cSBarry Smith idx = a->j + a->i[i]; 2624ed1c418cSBarry Smith v = a->a + a->i[i]; 2625ed1c418cSBarry Smith n = a->i[i+1] - a->i[i]; 2626ed1c418cSBarry Smith alpha1 = x[18*i]; 2627ed1c418cSBarry Smith alpha2 = x[18*i+1]; 2628ed1c418cSBarry Smith alpha3 = x[18*i+2]; 2629ed1c418cSBarry Smith alpha4 = x[18*i+3]; 2630ed1c418cSBarry Smith alpha5 = x[18*i+4]; 2631ed1c418cSBarry Smith alpha6 = x[18*i+5]; 2632ed1c418cSBarry Smith alpha7 = x[18*i+6]; 2633ed1c418cSBarry Smith alpha8 = x[18*i+7]; 2634ed1c418cSBarry Smith alpha9 = x[18*i+8]; 2635ed1c418cSBarry Smith alpha10 = x[18*i+9]; 2636ed1c418cSBarry Smith alpha11 = x[18*i+10]; 2637ed1c418cSBarry Smith alpha12 = x[18*i+11]; 2638ed1c418cSBarry Smith alpha13 = x[18*i+12]; 2639ed1c418cSBarry Smith alpha14 = x[18*i+13]; 2640ed1c418cSBarry Smith alpha15 = x[18*i+14]; 2641ed1c418cSBarry Smith alpha16 = x[18*i+15]; 2642ed1c418cSBarry Smith alpha17 = x[18*i+16]; 2643ed1c418cSBarry Smith alpha18 = x[18*i+17]; 2644ed1c418cSBarry Smith while (n-->0) { 2645ed1c418cSBarry Smith y[18*(*idx)] += alpha1*(*v); 2646ed1c418cSBarry Smith y[18*(*idx)+1] += alpha2*(*v); 2647ed1c418cSBarry Smith y[18*(*idx)+2] += alpha3*(*v); 2648ed1c418cSBarry Smith y[18*(*idx)+3] += alpha4*(*v); 2649ed1c418cSBarry Smith y[18*(*idx)+4] += alpha5*(*v); 2650ed1c418cSBarry Smith y[18*(*idx)+5] += alpha6*(*v); 2651ed1c418cSBarry Smith y[18*(*idx)+6] += alpha7*(*v); 2652ed1c418cSBarry Smith y[18*(*idx)+7] += alpha8*(*v); 2653ed1c418cSBarry Smith y[18*(*idx)+8] += alpha9*(*v); 2654ed1c418cSBarry Smith y[18*(*idx)+9] += alpha10*(*v); 2655ed1c418cSBarry Smith y[18*(*idx)+10] += alpha11*(*v); 2656ed1c418cSBarry Smith y[18*(*idx)+11] += alpha12*(*v); 2657ed1c418cSBarry Smith y[18*(*idx)+12] += alpha13*(*v); 2658ed1c418cSBarry Smith y[18*(*idx)+13] += alpha14*(*v); 2659ed1c418cSBarry Smith y[18*(*idx)+14] += alpha15*(*v); 2660ed1c418cSBarry Smith y[18*(*idx)+15] += alpha16*(*v); 2661ed1c418cSBarry Smith y[18*(*idx)+16] += alpha17*(*v); 2662ed1c418cSBarry Smith y[18*(*idx)+17] += alpha18*(*v); 2663ed1c418cSBarry Smith idx++; v++; 2664ed1c418cSBarry Smith } 2665ed1c418cSBarry Smith } 2666dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz);CHKERRQ(ierr); 26673649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2668ed1c418cSBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 2669ed1c418cSBarry Smith PetscFunctionReturn(0); 2670ed1c418cSBarry Smith } 2671ed1c418cSBarry Smith 26726861f193SBarry Smith PetscErrorCode MatMult_SeqMAIJ_N(Mat A,Vec xx,Vec yy) 26736861f193SBarry Smith { 26746861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 26756861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 26766861f193SBarry Smith const PetscScalar *x,*v; 26776861f193SBarry Smith PetscScalar *y,*sums; 26786861f193SBarry Smith PetscErrorCode ierr; 26796861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 26806861f193SBarry Smith PetscInt n,i,jrow,j,dof = b->dof,k; 26816861f193SBarry Smith 26826861f193SBarry Smith PetscFunctionBegin; 26833649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 26846861f193SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 26856861f193SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 26866861f193SBarry Smith idx = a->j; 26876861f193SBarry Smith v = a->a; 26886861f193SBarry Smith ii = a->i; 26896861f193SBarry Smith 26906861f193SBarry Smith for (i=0; i<m; i++) { 26916861f193SBarry Smith jrow = ii[i]; 26926861f193SBarry Smith n = ii[i+1] - jrow; 26936861f193SBarry Smith sums = y + dof*i; 26946861f193SBarry Smith for (j=0; j<n; j++) { 26956861f193SBarry Smith for (k=0; k<dof; k++) { 26966861f193SBarry Smith sums[k] += v[jrow]*x[dof*idx[jrow]+k]; 26976861f193SBarry Smith } 26986861f193SBarry Smith jrow++; 26996861f193SBarry Smith } 27006861f193SBarry Smith } 27016861f193SBarry Smith 27026861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 27033649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 27046861f193SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 27056861f193SBarry Smith PetscFunctionReturn(0); 27066861f193SBarry Smith } 27076861f193SBarry Smith 27086861f193SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 27096861f193SBarry Smith { 27106861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 27116861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 27126861f193SBarry Smith const PetscScalar *x,*v; 27136861f193SBarry Smith PetscScalar *y,*sums; 27146861f193SBarry Smith PetscErrorCode ierr; 27156861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 27166861f193SBarry Smith PetscInt n,i,jrow,j,dof = b->dof,k; 27176861f193SBarry Smith 27186861f193SBarry Smith PetscFunctionBegin; 27196861f193SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 27203649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 27216861f193SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 27226861f193SBarry Smith idx = a->j; 27236861f193SBarry Smith v = a->a; 27246861f193SBarry Smith ii = a->i; 27256861f193SBarry Smith 27266861f193SBarry Smith for (i=0; i<m; i++) { 27276861f193SBarry Smith jrow = ii[i]; 27286861f193SBarry Smith n = ii[i+1] - jrow; 27296861f193SBarry Smith sums = y + dof*i; 27306861f193SBarry Smith for (j=0; j<n; j++) { 27316861f193SBarry Smith for (k=0; k<dof; k++) { 27326861f193SBarry Smith sums[k] += v[jrow]*x[dof*idx[jrow]+k]; 27336861f193SBarry Smith } 27346861f193SBarry Smith jrow++; 27356861f193SBarry Smith } 27366861f193SBarry Smith } 27376861f193SBarry Smith 27386861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 27393649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 27406861f193SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 27416861f193SBarry Smith PetscFunctionReturn(0); 27426861f193SBarry Smith } 27436861f193SBarry Smith 27446861f193SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_N(Mat A,Vec xx,Vec yy) 27456861f193SBarry Smith { 27466861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 27476861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 27486861f193SBarry Smith const PetscScalar *x,*v,*alpha; 27496861f193SBarry Smith PetscScalar *y; 27506861f193SBarry Smith PetscErrorCode ierr; 27516861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,dof = b->dof; 27526861f193SBarry Smith PetscInt n,i,k; 27536861f193SBarry Smith 27546861f193SBarry Smith PetscFunctionBegin; 27553649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 27566861f193SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 27576861f193SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 27586861f193SBarry Smith for (i=0; i<m; i++) { 27596861f193SBarry Smith idx = a->j + a->i[i]; 27606861f193SBarry Smith v = a->a + a->i[i]; 27616861f193SBarry Smith n = a->i[i+1] - a->i[i]; 27626861f193SBarry Smith alpha = x + dof*i; 27636861f193SBarry Smith while (n-->0) { 27646861f193SBarry Smith for (k=0; k<dof; k++) { 27656861f193SBarry Smith y[dof*(*idx)+k] += alpha[k]*(*v); 27666861f193SBarry Smith } 276783ce7366SBarry Smith idx++; v++; 27686861f193SBarry Smith } 27696861f193SBarry Smith } 27706861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 27713649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 27726861f193SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 27736861f193SBarry Smith PetscFunctionReturn(0); 27746861f193SBarry Smith } 27756861f193SBarry Smith 27766861f193SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 27776861f193SBarry Smith { 27786861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 27796861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 27806861f193SBarry Smith const PetscScalar *x,*v,*alpha; 27816861f193SBarry Smith PetscScalar *y; 27826861f193SBarry Smith PetscErrorCode ierr; 27836861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,dof = b->dof; 27846861f193SBarry Smith PetscInt n,i,k; 27856861f193SBarry Smith 27866861f193SBarry Smith PetscFunctionBegin; 27876861f193SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 27883649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 27896861f193SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 27906861f193SBarry Smith for (i=0; i<m; i++) { 27916861f193SBarry Smith idx = a->j + a->i[i]; 27926861f193SBarry Smith v = a->a + a->i[i]; 27936861f193SBarry Smith n = a->i[i+1] - a->i[i]; 27946861f193SBarry Smith alpha = x + dof*i; 27956861f193SBarry Smith while (n-->0) { 27966861f193SBarry Smith for (k=0; k<dof; k++) { 27976861f193SBarry Smith y[dof*(*idx)+k] += alpha[k]*(*v); 27986861f193SBarry Smith } 279983ce7366SBarry Smith idx++; v++; 28006861f193SBarry Smith } 28016861f193SBarry Smith } 28026861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 28033649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 28046861f193SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 28056861f193SBarry Smith PetscFunctionReturn(0); 28066861f193SBarry Smith } 28076861f193SBarry Smith 2808f4a53059SBarry Smith /*===================================================================================*/ 2809dfbe8321SBarry Smith PetscErrorCode MatMult_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 2810f4a53059SBarry Smith { 28114cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2812dfbe8321SBarry Smith PetscErrorCode ierr; 2813f4a53059SBarry Smith 2814b24ad042SBarry Smith PetscFunctionBegin; 2815f4a53059SBarry Smith /* start the scatter */ 2816ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 28174cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->mult)(b->AIJ,xx,yy);CHKERRQ(ierr); 2818ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 28194cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,yy,yy);CHKERRQ(ierr); 2820f4a53059SBarry Smith PetscFunctionReturn(0); 2821f4a53059SBarry Smith } 2822f4a53059SBarry Smith 2823dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 28244cb9d9b8SBarry Smith { 28254cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2826dfbe8321SBarry Smith PetscErrorCode ierr; 2827b24ad042SBarry Smith 28284cb9d9b8SBarry Smith PetscFunctionBegin; 28294cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 28304cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->multtranspose)(b->AIJ,xx,yy);CHKERRQ(ierr); 2831ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,b->w,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 2832ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,b->w,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 28334cb9d9b8SBarry Smith PetscFunctionReturn(0); 28344cb9d9b8SBarry Smith } 28354cb9d9b8SBarry Smith 2836dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 28374cb9d9b8SBarry Smith { 28384cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2839dfbe8321SBarry Smith PetscErrorCode ierr; 28404cb9d9b8SBarry Smith 2841b24ad042SBarry Smith PetscFunctionBegin; 28424cb9d9b8SBarry Smith /* start the scatter */ 2843ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2844d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 2845ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2846717f2ec8SHong Zhang ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,zz,zz);CHKERRQ(ierr); 28474cb9d9b8SBarry Smith PetscFunctionReturn(0); 28484cb9d9b8SBarry Smith } 28494cb9d9b8SBarry Smith 2850dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 28514cb9d9b8SBarry Smith { 28524cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2853dfbe8321SBarry Smith PetscErrorCode ierr; 2854b24ad042SBarry Smith 28554cb9d9b8SBarry Smith PetscFunctionBegin; 28564cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 2857ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,b->w,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 2858d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multtransposeadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 2859ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,b->w,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 28604cb9d9b8SBarry Smith PetscFunctionReturn(0); 28614cb9d9b8SBarry Smith } 28624cb9d9b8SBarry Smith 286395ddefa2SHong Zhang /* ----------------------------------------------------------------*/ 28647ba1a0bfSKris Buschelman PetscErrorCode MatPtAPSymbolic_SeqAIJ_SeqMAIJ(Mat A,Mat PP,PetscReal fill,Mat *C) 28657ba1a0bfSKris Buschelman { 28667ba1a0bfSKris Buschelman PetscErrorCode ierr; 28670298fd71SBarry Smith PetscFreeSpaceList free_space=NULL,current_space=NULL; 28687ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp =(Mat_SeqMAIJ*)PP->data; 28697ba1a0bfSKris Buschelman Mat P =pp->AIJ; 28707ba1a0bfSKris Buschelman Mat_SeqAIJ *a =(Mat_SeqAIJ*)A->data,*p=(Mat_SeqAIJ*)P->data,*c; 2871d2840e09SBarry Smith PetscInt *pti,*ptj,*ptJ; 28727ba1a0bfSKris Buschelman PetscInt *ci,*cj,*ptadenserow,*ptasparserow,*denserow,*sparserow,*ptaj; 2873d2840e09SBarry Smith const PetscInt an=A->cmap->N,am=A->rmap->N,pn=P->cmap->N,pm=P->rmap->N,ppdof=pp->dof; 2874d2840e09SBarry Smith PetscInt i,j,k,dof,pshift,ptnzi,arow,anzj,ptanzi,prow,pnzj,cnzi,cn; 28757ba1a0bfSKris Buschelman MatScalar *ca; 2876d2840e09SBarry Smith const PetscInt *pi = p->i,*pj = p->j,*pjj,*ai=a->i,*aj=a->j,*ajj; 28777ba1a0bfSKris Buschelman 28787ba1a0bfSKris Buschelman PetscFunctionBegin; 28797ba1a0bfSKris Buschelman /* Get ij structure of P^T */ 28807ba1a0bfSKris Buschelman ierr = MatGetSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 28817ba1a0bfSKris Buschelman 28827ba1a0bfSKris Buschelman cn = pn*ppdof; 28837ba1a0bfSKris Buschelman /* Allocate ci array, arrays for fill computation and */ 28847ba1a0bfSKris Buschelman /* free space for accumulating nonzero column info */ 2885854ce69bSBarry Smith ierr = PetscMalloc1(cn+1,&ci);CHKERRQ(ierr); 28867ba1a0bfSKris Buschelman ci[0] = 0; 28877ba1a0bfSKris Buschelman 28887ba1a0bfSKris Buschelman /* Work arrays for rows of P^T*A */ 2889dcca6d9dSJed Brown ierr = PetscMalloc4(an,&ptadenserow,an,&ptasparserow,cn,&denserow,cn,&sparserow);CHKERRQ(ierr); 2890c43dabc9SBarry Smith ierr = PetscMemzero(ptadenserow,an*sizeof(PetscInt));CHKERRQ(ierr); 2891c43dabc9SBarry Smith ierr = PetscMemzero(denserow,cn*sizeof(PetscInt));CHKERRQ(ierr); 28927ba1a0bfSKris Buschelman 28937ba1a0bfSKris Buschelman /* Set initial free space to be nnz(A) scaled by aspect ratio of P. */ 28947ba1a0bfSKris Buschelman /* This should be reasonable if sparsity of PtAP is similar to that of A. */ 28957ba1a0bfSKris Buschelman /* Note, aspect ratio of P is the same as the aspect ratio of SeqAIJ inside P */ 2896f91af8c7SBarry Smith ierr = PetscFreeSpaceGet(PetscIntMultTruncate(ai[am]/pm,pn),&free_space);CHKERRQ(ierr); 28977ba1a0bfSKris Buschelman current_space = free_space; 28987ba1a0bfSKris Buschelman 28997ba1a0bfSKris Buschelman /* Determine symbolic info for each row of C: */ 29007ba1a0bfSKris Buschelman for (i=0; i<pn; i++) { 29017ba1a0bfSKris Buschelman ptnzi = pti[i+1] - pti[i]; 29027ba1a0bfSKris Buschelman ptJ = ptj + pti[i]; 29037ba1a0bfSKris Buschelman for (dof=0; dof<ppdof; dof++) { 29047ba1a0bfSKris Buschelman ptanzi = 0; 29057ba1a0bfSKris Buschelman /* Determine symbolic row of PtA: */ 29067ba1a0bfSKris Buschelman for (j=0; j<ptnzi; j++) { 29077ba1a0bfSKris Buschelman /* Expand ptJ[j] by block size and shift by dof to get the right row of A */ 29087ba1a0bfSKris Buschelman arow = ptJ[j]*ppdof + dof; 29097ba1a0bfSKris Buschelman /* Nonzeros of P^T*A will be in same locations as any element of A in that row */ 29107ba1a0bfSKris Buschelman anzj = ai[arow+1] - ai[arow]; 29117ba1a0bfSKris Buschelman ajj = aj + ai[arow]; 29127ba1a0bfSKris Buschelman for (k=0; k<anzj; k++) { 29137ba1a0bfSKris Buschelman if (!ptadenserow[ajj[k]]) { 29147ba1a0bfSKris Buschelman ptadenserow[ajj[k]] = -1; 29157ba1a0bfSKris Buschelman ptasparserow[ptanzi++] = ajj[k]; 29167ba1a0bfSKris Buschelman } 29177ba1a0bfSKris Buschelman } 29187ba1a0bfSKris Buschelman } 29197ba1a0bfSKris Buschelman /* Using symbolic info for row of PtA, determine symbolic info for row of C: */ 29207ba1a0bfSKris Buschelman ptaj = ptasparserow; 29217ba1a0bfSKris Buschelman cnzi = 0; 29227ba1a0bfSKris Buschelman for (j=0; j<ptanzi; j++) { 29237ba1a0bfSKris Buschelman /* Get offset within block of P */ 29247ba1a0bfSKris Buschelman pshift = *ptaj%ppdof; 29257ba1a0bfSKris Buschelman /* Get block row of P */ 29267ba1a0bfSKris Buschelman prow = (*ptaj++)/ppdof; /* integer division */ 29277ba1a0bfSKris Buschelman /* P has same number of nonzeros per row as the compressed form */ 29287ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 29297ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 29307ba1a0bfSKris Buschelman for (k=0;k<pnzj;k++) { 29317ba1a0bfSKris Buschelman /* Locations in C are shifted by the offset within the block */ 29327ba1a0bfSKris Buschelman /* Note: we cannot use PetscLLAdd here because of the additional offset for the write location */ 29337ba1a0bfSKris Buschelman if (!denserow[pjj[k]*ppdof+pshift]) { 29347ba1a0bfSKris Buschelman denserow[pjj[k]*ppdof+pshift] = -1; 29357ba1a0bfSKris Buschelman sparserow[cnzi++] = pjj[k]*ppdof+pshift; 29367ba1a0bfSKris Buschelman } 29377ba1a0bfSKris Buschelman } 29387ba1a0bfSKris Buschelman } 29397ba1a0bfSKris Buschelman 29407ba1a0bfSKris Buschelman /* sort sparserow */ 29417ba1a0bfSKris Buschelman ierr = PetscSortInt(cnzi,sparserow);CHKERRQ(ierr); 29427ba1a0bfSKris Buschelman 29437ba1a0bfSKris Buschelman /* If free space is not available, make more free space */ 29447ba1a0bfSKris Buschelman /* Double the amount of total space in the list */ 29457ba1a0bfSKris Buschelman if (current_space->local_remaining<cnzi) { 2946f91af8c7SBarry Smith ierr = PetscFreeSpaceGet(PetscIntSumTruncate(cnzi,current_space->total_array_size),¤t_space);CHKERRQ(ierr); 29477ba1a0bfSKris Buschelman } 29487ba1a0bfSKris Buschelman 29497ba1a0bfSKris Buschelman /* Copy data into free space, and zero out denserows */ 29507ba1a0bfSKris Buschelman ierr = PetscMemcpy(current_space->array,sparserow,cnzi*sizeof(PetscInt));CHKERRQ(ierr); 295126fbe8dcSKarl Rupp 29527ba1a0bfSKris Buschelman current_space->array += cnzi; 29537ba1a0bfSKris Buschelman current_space->local_used += cnzi; 29547ba1a0bfSKris Buschelman current_space->local_remaining -= cnzi; 29557ba1a0bfSKris Buschelman 295626fbe8dcSKarl Rupp for (j=0; j<ptanzi; j++) ptadenserow[ptasparserow[j]] = 0; 295726fbe8dcSKarl Rupp for (j=0; j<cnzi; j++) denserow[sparserow[j]] = 0; 295826fbe8dcSKarl Rupp 29597ba1a0bfSKris Buschelman /* Aside: Perhaps we should save the pta info for the numerical factorization. */ 29607ba1a0bfSKris Buschelman /* For now, we will recompute what is needed. */ 29617ba1a0bfSKris Buschelman ci[i*ppdof+1+dof] = ci[i*ppdof+dof] + cnzi; 29627ba1a0bfSKris Buschelman } 29637ba1a0bfSKris Buschelman } 29647ba1a0bfSKris Buschelman /* nnz is now stored in ci[ptm], column indices are in the list of free space */ 29657ba1a0bfSKris Buschelman /* Allocate space for cj, initialize cj, and */ 29667ba1a0bfSKris Buschelman /* destroy list of free space and other temporary array(s) */ 2967854ce69bSBarry Smith ierr = PetscMalloc1(ci[cn]+1,&cj);CHKERRQ(ierr); 2968a1a86e44SBarry Smith ierr = PetscFreeSpaceContiguous(&free_space,cj);CHKERRQ(ierr); 296974ed9c26SBarry Smith ierr = PetscFree4(ptadenserow,ptasparserow,denserow,sparserow);CHKERRQ(ierr); 29707ba1a0bfSKris Buschelman 29717ba1a0bfSKris Buschelman /* Allocate space for ca */ 2972854ce69bSBarry Smith ierr = PetscCalloc1(ci[cn]+1,&ca);CHKERRQ(ierr); 29737ba1a0bfSKris Buschelman 29747ba1a0bfSKris Buschelman /* put together the new matrix */ 2975ce94432eSBarry Smith ierr = MatCreateSeqAIJWithArrays(PetscObjectComm((PetscObject)A),cn,cn,ci,cj,ca,C);CHKERRQ(ierr); 2976f27682edSJed Brown ierr = MatSetBlockSize(*C,pp->dof);CHKERRQ(ierr); 29777ba1a0bfSKris Buschelman 29787ba1a0bfSKris Buschelman /* MatCreateSeqAIJWithArrays flags matrix so PETSc doesn't free the user's arrays. */ 29797ba1a0bfSKris Buschelman /* Since these are PETSc arrays, change flags to free them as necessary. */ 29807ba1a0bfSKris Buschelman c = (Mat_SeqAIJ*)((*C)->data); 2981e6b907acSBarry Smith c->free_a = PETSC_TRUE; 2982e6b907acSBarry Smith c->free_ij = PETSC_TRUE; 29837ba1a0bfSKris Buschelman c->nonew = 0; 298426fbe8dcSKarl Rupp 2985d76021d8SHong Zhang (*C)->ops->ptapnumeric = MatPtAPNumeric_SeqAIJ_SeqMAIJ; 29867ba1a0bfSKris Buschelman 29877ba1a0bfSKris Buschelman /* Clean up. */ 29887ba1a0bfSKris Buschelman ierr = MatRestoreSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 29897ba1a0bfSKris Buschelman PetscFunctionReturn(0); 29907ba1a0bfSKris Buschelman } 29917ba1a0bfSKris Buschelman 29927ba1a0bfSKris Buschelman PetscErrorCode MatPtAPNumeric_SeqAIJ_SeqMAIJ(Mat A,Mat PP,Mat C) 29937ba1a0bfSKris Buschelman { 29947ba1a0bfSKris Buschelman /* This routine requires testing -- first draft only */ 29957ba1a0bfSKris Buschelman PetscErrorCode ierr; 29967ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp=(Mat_SeqMAIJ*)PP->data; 29977ba1a0bfSKris Buschelman Mat P =pp->AIJ; 29987ba1a0bfSKris Buschelman Mat_SeqAIJ *a = (Mat_SeqAIJ*) A->data; 29997ba1a0bfSKris Buschelman Mat_SeqAIJ *p = (Mat_SeqAIJ*) P->data; 30007ba1a0bfSKris Buschelman Mat_SeqAIJ *c = (Mat_SeqAIJ*) C->data; 3001a2ea699eSBarry Smith const PetscInt *ai=a->i,*aj=a->j,*pi=p->i,*pj=p->j,*pJ,*pjj; 3002d2840e09SBarry Smith const PetscInt *ci=c->i,*cj=c->j,*cjj; 3003d2840e09SBarry Smith const PetscInt am =A->rmap->N,cn=C->cmap->N,cm=C->rmap->N,ppdof=pp->dof; 3004d2840e09SBarry Smith PetscInt i,j,k,pshift,poffset,anzi,pnzi,apnzj,nextap,pnzj,prow,crow,*apj,*apjdense; 3005a2ea699eSBarry Smith const MatScalar *aa=a->a,*pa=p->a,*pA,*paj; 3006d2840e09SBarry Smith MatScalar *ca=c->a,*caj,*apa; 30077ba1a0bfSKris Buschelman 30087ba1a0bfSKris Buschelman PetscFunctionBegin; 30097ba1a0bfSKris Buschelman /* Allocate temporary array for storage of one row of A*P */ 30101795a4d1SJed Brown ierr = PetscCalloc3(cn,&apa,cn,&apj,cn,&apjdense);CHKERRQ(ierr); 30117ba1a0bfSKris Buschelman 30127ba1a0bfSKris Buschelman /* Clear old values in C */ 30137ba1a0bfSKris Buschelman ierr = PetscMemzero(ca,ci[cm]*sizeof(MatScalar));CHKERRQ(ierr); 30147ba1a0bfSKris Buschelman 30157ba1a0bfSKris Buschelman for (i=0; i<am; i++) { 30167ba1a0bfSKris Buschelman /* Form sparse row of A*P */ 30177ba1a0bfSKris Buschelman anzi = ai[i+1] - ai[i]; 30187ba1a0bfSKris Buschelman apnzj = 0; 30197ba1a0bfSKris Buschelman for (j=0; j<anzi; j++) { 30207ba1a0bfSKris Buschelman /* Get offset within block of P */ 30217ba1a0bfSKris Buschelman pshift = *aj%ppdof; 30227ba1a0bfSKris Buschelman /* Get block row of P */ 30237ba1a0bfSKris Buschelman prow = *aj++/ppdof; /* integer division */ 30247ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 30257ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 30267ba1a0bfSKris Buschelman paj = pa + pi[prow]; 30277ba1a0bfSKris Buschelman for (k=0; k<pnzj; k++) { 30287ba1a0bfSKris Buschelman poffset = pjj[k]*ppdof+pshift; 30297ba1a0bfSKris Buschelman if (!apjdense[poffset]) { 30307ba1a0bfSKris Buschelman apjdense[poffset] = -1; 30317ba1a0bfSKris Buschelman apj[apnzj++] = poffset; 30327ba1a0bfSKris Buschelman } 30337ba1a0bfSKris Buschelman apa[poffset] += (*aa)*paj[k]; 30347ba1a0bfSKris Buschelman } 3035dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*pnzj);CHKERRQ(ierr); 30367ba1a0bfSKris Buschelman aa++; 30377ba1a0bfSKris Buschelman } 30387ba1a0bfSKris Buschelman 30397ba1a0bfSKris Buschelman /* Sort the j index array for quick sparse axpy. */ 30407ba1a0bfSKris Buschelman /* Note: a array does not need sorting as it is in dense storage locations. */ 30417ba1a0bfSKris Buschelman ierr = PetscSortInt(apnzj,apj);CHKERRQ(ierr); 30427ba1a0bfSKris Buschelman 30437ba1a0bfSKris Buschelman /* Compute P^T*A*P using outer product (P^T)[:,j]*(A*P)[j,:]. */ 30447ba1a0bfSKris Buschelman prow = i/ppdof; /* integer division */ 30457ba1a0bfSKris Buschelman pshift = i%ppdof; 30467ba1a0bfSKris Buschelman poffset = pi[prow]; 30477ba1a0bfSKris Buschelman pnzi = pi[prow+1] - poffset; 30487ba1a0bfSKris Buschelman /* Reset pJ and pA so we can traverse the same row of P 'dof' times. */ 30497ba1a0bfSKris Buschelman pJ = pj+poffset; 30507ba1a0bfSKris Buschelman pA = pa+poffset; 30517ba1a0bfSKris Buschelman for (j=0; j<pnzi; j++) { 30527ba1a0bfSKris Buschelman crow = (*pJ)*ppdof+pshift; 30537ba1a0bfSKris Buschelman cjj = cj + ci[crow]; 30547ba1a0bfSKris Buschelman caj = ca + ci[crow]; 30557ba1a0bfSKris Buschelman pJ++; 30567ba1a0bfSKris Buschelman /* Perform sparse axpy operation. Note cjj includes apj. */ 30577ba1a0bfSKris Buschelman for (k=0,nextap=0; nextap<apnzj; k++) { 305826fbe8dcSKarl Rupp if (cjj[k] == apj[nextap]) caj[k] += (*pA)*apa[apj[nextap++]]; 30597ba1a0bfSKris Buschelman } 3060dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*apnzj);CHKERRQ(ierr); 30617ba1a0bfSKris Buschelman pA++; 30627ba1a0bfSKris Buschelman } 30637ba1a0bfSKris Buschelman 30647ba1a0bfSKris Buschelman /* Zero the current row info for A*P */ 30657ba1a0bfSKris Buschelman for (j=0; j<apnzj; j++) { 30667ba1a0bfSKris Buschelman apa[apj[j]] = 0.; 30677ba1a0bfSKris Buschelman apjdense[apj[j]] = 0; 30687ba1a0bfSKris Buschelman } 30697ba1a0bfSKris Buschelman } 30707ba1a0bfSKris Buschelman 30717ba1a0bfSKris Buschelman /* Assemble the final matrix and clean up */ 30727ba1a0bfSKris Buschelman ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 30737ba1a0bfSKris Buschelman ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 307474ed9c26SBarry Smith ierr = PetscFree3(apa,apj,apjdense);CHKERRQ(ierr); 307595ddefa2SHong Zhang PetscFunctionReturn(0); 307695ddefa2SHong Zhang } 30777ba1a0bfSKris Buschelman 3078150d2497SBarry Smith PETSC_INTERN PetscErrorCode MatPtAP_SeqAIJ_SeqMAIJ(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C) 30792121bac1SHong Zhang { 30802121bac1SHong Zhang PetscErrorCode ierr; 30812121bac1SHong Zhang 30822121bac1SHong Zhang PetscFunctionBegin; 30832121bac1SHong Zhang if (scall == MAT_INITIAL_MATRIX) { 30843ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 30852121bac1SHong Zhang ierr = MatPtAPSymbolic_SeqAIJ_SeqMAIJ(A,P,fill,C);CHKERRQ(ierr); 30863ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 30872121bac1SHong Zhang } 30883ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 30892121bac1SHong Zhang ierr = MatPtAPNumeric_SeqAIJ_SeqMAIJ(A,P,*C);CHKERRQ(ierr); 30903ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 30912121bac1SHong Zhang PetscFunctionReturn(0); 30922121bac1SHong Zhang } 30932121bac1SHong Zhang 3094f7a08781SBarry Smith PetscErrorCode MatPtAPSymbolic_MPIAIJ_MPIMAIJ(Mat A,Mat PP,PetscReal fill,Mat *C) 309595ddefa2SHong Zhang { 309695ddefa2SHong Zhang PetscErrorCode ierr; 309795ddefa2SHong Zhang 309895ddefa2SHong Zhang PetscFunctionBegin; 309995ddefa2SHong Zhang /* MatPtAPSymbolic_MPIAIJ_MPIMAIJ() is not implemented yet. Convert PP to mpiaij format */ 3100511c6705SHong Zhang ierr = MatConvert(PP,MATMPIAIJ,MAT_INPLACE_MATRIX,&PP);CHKERRQ(ierr); 310195ddefa2SHong Zhang ierr =(*PP->ops->ptapsymbolic)(A,PP,fill,C);CHKERRQ(ierr); 310295ddefa2SHong Zhang PetscFunctionReturn(0); 310395ddefa2SHong Zhang } 310495ddefa2SHong Zhang 3105f7a08781SBarry Smith PetscErrorCode MatPtAPNumeric_MPIAIJ_MPIMAIJ(Mat A,Mat PP,Mat C) 310695ddefa2SHong Zhang { 310795ddefa2SHong Zhang PetscFunctionBegin; 3108e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MatPtAPNumeric is not implemented for MPIMAIJ matrix yet"); 31097ba1a0bfSKris Buschelman PetscFunctionReturn(0); 31107ba1a0bfSKris Buschelman } 31117ba1a0bfSKris Buschelman 3112150d2497SBarry Smith PETSC_INTERN PetscErrorCode MatPtAP_MPIAIJ_MPIMAIJ(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C) 31139e03dfbbSHong Zhang { 31149e03dfbbSHong Zhang PetscErrorCode ierr; 31159e03dfbbSHong Zhang 31169e03dfbbSHong Zhang PetscFunctionBegin; 31179e03dfbbSHong Zhang if (scall == MAT_INITIAL_MATRIX) { 31183ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 31199e03dfbbSHong Zhang ierr = MatPtAPSymbolic_MPIAIJ_MPIMAIJ(A,P,fill,C);CHKERRQ(ierr); 31203ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 31219e03dfbbSHong Zhang } 31223ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 31239e03dfbbSHong Zhang ierr = ((*C)->ops->ptapnumeric)(A,P,*C);CHKERRQ(ierr); 31243ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 31259e03dfbbSHong Zhang PetscFunctionReturn(0); 31269e03dfbbSHong Zhang } 31279e03dfbbSHong Zhang 3128cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_SeqMAIJ_SeqAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat) 31299c4fc4c7SBarry Smith { 31309c4fc4c7SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 3131ceb03754SKris Buschelman Mat a = b->AIJ,B; 31329c4fc4c7SBarry Smith Mat_SeqAIJ *aij = (Mat_SeqAIJ*)a->data; 31339c4fc4c7SBarry Smith PetscErrorCode ierr; 31340fd73130SBarry Smith PetscInt m,n,i,ncols,*ilen,nmax = 0,*icols,j,k,ii,dof = b->dof; 3135ba8c8a56SBarry Smith PetscInt *cols; 3136ba8c8a56SBarry Smith PetscScalar *vals; 31379c4fc4c7SBarry Smith 31389c4fc4c7SBarry Smith PetscFunctionBegin; 31399c4fc4c7SBarry Smith ierr = MatGetSize(a,&m,&n);CHKERRQ(ierr); 3140785e854fSJed Brown ierr = PetscMalloc1(dof*m,&ilen);CHKERRQ(ierr); 31419c4fc4c7SBarry Smith for (i=0; i<m; i++) { 31429c4fc4c7SBarry Smith nmax = PetscMax(nmax,aij->ilen[i]); 314326fbe8dcSKarl Rupp for (j=0; j<dof; j++) ilen[dof*i+j] = aij->ilen[i]; 31449c4fc4c7SBarry Smith } 3145ceb03754SKris Buschelman ierr = MatCreateSeqAIJ(PETSC_COMM_SELF,dof*m,dof*n,0,ilen,&B);CHKERRQ(ierr); 31469c4fc4c7SBarry Smith ierr = PetscFree(ilen);CHKERRQ(ierr); 3147785e854fSJed Brown ierr = PetscMalloc1(nmax,&icols);CHKERRQ(ierr); 31489c4fc4c7SBarry Smith ii = 0; 31499c4fc4c7SBarry Smith for (i=0; i<m; i++) { 3150ba8c8a56SBarry Smith ierr = MatGetRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 31510fd73130SBarry Smith for (j=0; j<dof; j++) { 315226fbe8dcSKarl Rupp for (k=0; k<ncols; k++) icols[k] = dof*cols[k]+j; 3153ceb03754SKris Buschelman ierr = MatSetValues_SeqAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 31549c4fc4c7SBarry Smith ii++; 31559c4fc4c7SBarry Smith } 3156ba8c8a56SBarry Smith ierr = MatRestoreRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 31579c4fc4c7SBarry Smith } 31589c4fc4c7SBarry Smith ierr = PetscFree(icols);CHKERRQ(ierr); 3159ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3160ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3161ceb03754SKris Buschelman 3162511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 316328be2f97SBarry Smith ierr = MatHeaderReplace(A,&B);CHKERRQ(ierr); 3164c3d102feSKris Buschelman } else { 3165ceb03754SKris Buschelman *newmat = B; 3166c3d102feSKris Buschelman } 31679c4fc4c7SBarry Smith PetscFunctionReturn(0); 31689c4fc4c7SBarry Smith } 31699c4fc4c7SBarry Smith 3170c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> 3171be1d678aSKris Buschelman 3172cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIMAIJ_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat) 31730fd73130SBarry Smith { 31740fd73130SBarry Smith Mat_MPIMAIJ *maij = (Mat_MPIMAIJ*)A->data; 3175ceb03754SKris Buschelman Mat MatAIJ = ((Mat_SeqMAIJ*)maij->AIJ->data)->AIJ,B; 31760fd73130SBarry Smith Mat MatOAIJ = ((Mat_SeqMAIJ*)maij->OAIJ->data)->AIJ; 31770fd73130SBarry Smith Mat_SeqAIJ *AIJ = (Mat_SeqAIJ*) MatAIJ->data; 31780fd73130SBarry Smith Mat_SeqAIJ *OAIJ =(Mat_SeqAIJ*) MatOAIJ->data; 31790fd73130SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ*) maij->A->data; 31800298fd71SBarry Smith PetscInt dof = maij->dof,i,j,*dnz = NULL,*onz = NULL,nmax = 0,onmax = 0; 31810298fd71SBarry Smith PetscInt *oicols = NULL,*icols = NULL,ncols,*cols = NULL,oncols,*ocols = NULL; 31820fd73130SBarry Smith PetscInt rstart,cstart,*garray,ii,k; 31830fd73130SBarry Smith PetscErrorCode ierr; 31840fd73130SBarry Smith PetscScalar *vals,*ovals; 31850fd73130SBarry Smith 31860fd73130SBarry Smith PetscFunctionBegin; 3187dcca6d9dSJed Brown ierr = PetscMalloc2(A->rmap->n,&dnz,A->rmap->n,&onz);CHKERRQ(ierr); 3188d0f46423SBarry Smith for (i=0; i<A->rmap->n/dof; i++) { 31890fd73130SBarry Smith nmax = PetscMax(nmax,AIJ->ilen[i]); 31900fd73130SBarry Smith onmax = PetscMax(onmax,OAIJ->ilen[i]); 31910fd73130SBarry Smith for (j=0; j<dof; j++) { 31920fd73130SBarry Smith dnz[dof*i+j] = AIJ->ilen[i]; 31930fd73130SBarry Smith onz[dof*i+j] = OAIJ->ilen[i]; 31940fd73130SBarry Smith } 31950fd73130SBarry Smith } 3196ce94432eSBarry Smith ierr = MatCreateAIJ(PetscObjectComm((PetscObject)A),A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N,0,dnz,0,onz,&B);CHKERRQ(ierr); 3197f27682edSJed Brown ierr = MatSetBlockSize(B,dof);CHKERRQ(ierr); 31980fd73130SBarry Smith ierr = PetscFree2(dnz,onz);CHKERRQ(ierr); 31990fd73130SBarry Smith 3200dcca6d9dSJed Brown ierr = PetscMalloc2(nmax,&icols,onmax,&oicols);CHKERRQ(ierr); 3201d0f46423SBarry Smith rstart = dof*maij->A->rmap->rstart; 3202d0f46423SBarry Smith cstart = dof*maij->A->cmap->rstart; 32030fd73130SBarry Smith garray = mpiaij->garray; 32040fd73130SBarry Smith 32050fd73130SBarry Smith ii = rstart; 3206d0f46423SBarry Smith for (i=0; i<A->rmap->n/dof; i++) { 32070fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 32080fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 32090fd73130SBarry Smith for (j=0; j<dof; j++) { 32100fd73130SBarry Smith for (k=0; k<ncols; k++) { 32110fd73130SBarry Smith icols[k] = cstart + dof*cols[k]+j; 32120fd73130SBarry Smith } 32130fd73130SBarry Smith for (k=0; k<oncols; k++) { 32140fd73130SBarry Smith oicols[k] = dof*garray[ocols[k]]+j; 32150fd73130SBarry Smith } 3216ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 3217ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,oncols,oicols,ovals,INSERT_VALUES);CHKERRQ(ierr); 32180fd73130SBarry Smith ii++; 32190fd73130SBarry Smith } 32200fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 32210fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 32220fd73130SBarry Smith } 32230fd73130SBarry Smith ierr = PetscFree2(icols,oicols);CHKERRQ(ierr); 32240fd73130SBarry Smith 3225ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3226ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3227ceb03754SKris Buschelman 3228511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 32297adad957SLisandro Dalcin PetscInt refct = ((PetscObject)A)->refct; /* save ((PetscObject)A)->refct */ 32307adad957SLisandro Dalcin ((PetscObject)A)->refct = 1; 323126fbe8dcSKarl Rupp 323228be2f97SBarry Smith ierr = MatHeaderReplace(A,&B);CHKERRQ(ierr); 323326fbe8dcSKarl Rupp 32347adad957SLisandro Dalcin ((PetscObject)A)->refct = refct; /* restore ((PetscObject)A)->refct */ 3235c3d102feSKris Buschelman } else { 3236ceb03754SKris Buschelman *newmat = B; 3237c3d102feSKris Buschelman } 32380fd73130SBarry Smith PetscFunctionReturn(0); 32390fd73130SBarry Smith } 32400fd73130SBarry Smith 32417dae84e0SHong Zhang PetscErrorCode MatCreateSubMatrix_MAIJ(Mat mat,IS isrow,IS iscol,MatReuse cll,Mat *newmat) 32429e516c8fSBarry Smith { 32439e516c8fSBarry Smith PetscErrorCode ierr; 32449e516c8fSBarry Smith Mat A; 32459e516c8fSBarry Smith 32469e516c8fSBarry Smith PetscFunctionBegin; 32479e516c8fSBarry Smith ierr = MatConvert(mat,MATAIJ,MAT_INITIAL_MATRIX,&A);CHKERRQ(ierr); 32487dae84e0SHong Zhang ierr = MatCreateSubMatrix(A,isrow,iscol,cll,newmat);CHKERRQ(ierr); 32499e516c8fSBarry Smith ierr = MatDestroy(&A);CHKERRQ(ierr); 32509e516c8fSBarry Smith PetscFunctionReturn(0); 32519e516c8fSBarry Smith } 32520fd73130SBarry Smith 3253bcc973b7SBarry Smith /* ---------------------------------------------------------------------------------- */ 3254480dffcfSJed Brown /*@ 32550bad9183SKris Buschelman MatCreateMAIJ - Creates a matrix type providing restriction and interpolation 32560bad9183SKris Buschelman operations for multicomponent problems. It interpolates each component the same 32570bad9183SKris Buschelman way independently. The matrix type is based on MATSEQAIJ for sequential matrices, 32580bad9183SKris Buschelman and MATMPIAIJ for distributed matrices. 32590bad9183SKris Buschelman 3260ff585edeSJed Brown Collective 3261ff585edeSJed Brown 3262ff585edeSJed Brown Input Parameters: 3263ff585edeSJed Brown + A - the AIJ matrix describing the action on blocks 3264ff585edeSJed Brown - dof - the block size (number of components per node) 3265ff585edeSJed Brown 3266ff585edeSJed Brown Output Parameter: 3267ff585edeSJed Brown . maij - the new MAIJ matrix 3268ff585edeSJed Brown 32690bad9183SKris Buschelman Operations provided: 32700fd73130SBarry Smith + MatMult 32710bad9183SKris Buschelman . MatMultTranspose 32720bad9183SKris Buschelman . MatMultAdd 32730bad9183SKris Buschelman . MatMultTransposeAdd 32740fd73130SBarry Smith - MatView 32750bad9183SKris Buschelman 32760bad9183SKris Buschelman Level: advanced 32770bad9183SKris Buschelman 3278b409243cSBarry Smith .seealso: MatMAIJGetAIJ(), MatMAIJRedimension(), MATMAIJ 3279ff585edeSJed Brown @*/ 32807087cfbeSBarry Smith PetscErrorCode MatCreateMAIJ(Mat A,PetscInt dof,Mat *maij) 328182b1193eSBarry Smith { 3282dfbe8321SBarry Smith PetscErrorCode ierr; 3283b24ad042SBarry Smith PetscMPIInt size; 3284b24ad042SBarry Smith PetscInt n; 328582b1193eSBarry Smith Mat B; 328682b1193eSBarry Smith 328782b1193eSBarry Smith PetscFunctionBegin; 3288d72c5c08SBarry Smith ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); 3289d72c5c08SBarry Smith 329026fbe8dcSKarl Rupp if (dof == 1) *maij = A; 329126fbe8dcSKarl Rupp else { 3292ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 3293d0f46423SBarry Smith ierr = MatSetSizes(B,dof*A->rmap->n,dof*A->cmap->n,dof*A->rmap->N,dof*A->cmap->N);CHKERRQ(ierr); 3294bccba955SJed Brown ierr = PetscLayoutSetBlockSize(B->rmap,dof);CHKERRQ(ierr); 3295bccba955SJed Brown ierr = PetscLayoutSetBlockSize(B->cmap,dof);CHKERRQ(ierr); 3296bccba955SJed Brown ierr = PetscLayoutSetUp(B->rmap);CHKERRQ(ierr); 3297bccba955SJed Brown ierr = PetscLayoutSetUp(B->cmap);CHKERRQ(ierr); 329826fbe8dcSKarl Rupp 3299cd3bbe55SBarry Smith B->assembled = PETSC_TRUE; 3300d72c5c08SBarry Smith 3301ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 3302f4a53059SBarry Smith if (size == 1) { 3303feb9fe23SJed Brown Mat_SeqMAIJ *b; 3304feb9fe23SJed Brown 3305b9b97703SBarry Smith ierr = MatSetType(B,MATSEQMAIJ);CHKERRQ(ierr); 330626fbe8dcSKarl Rupp 33070298fd71SBarry Smith B->ops->setup = NULL; 33084cb9d9b8SBarry Smith B->ops->destroy = MatDestroy_SeqMAIJ; 33090fd73130SBarry Smith B->ops->view = MatView_SeqMAIJ; 3310feb9fe23SJed Brown b = (Mat_SeqMAIJ*)B->data; 3311b9b97703SBarry Smith b->dof = dof; 33124cb9d9b8SBarry Smith b->AIJ = A; 331326fbe8dcSKarl Rupp 3314d72c5c08SBarry Smith if (dof == 2) { 3315cd3bbe55SBarry Smith B->ops->mult = MatMult_SeqMAIJ_2; 3316cd3bbe55SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_2; 3317cd3bbe55SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_2; 3318cd3bbe55SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_2; 3319bcc973b7SBarry Smith } else if (dof == 3) { 3320bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_3; 3321bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_3; 3322bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_3; 3323bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_3; 3324bcc973b7SBarry Smith } else if (dof == 4) { 3325bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_4; 3326bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_4; 3327bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_4; 3328bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_4; 3329f9fae5adSBarry Smith } else if (dof == 5) { 3330f9fae5adSBarry Smith B->ops->mult = MatMult_SeqMAIJ_5; 3331f9fae5adSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_5; 3332f9fae5adSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_5; 3333f9fae5adSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_5; 33346cd98798SBarry Smith } else if (dof == 6) { 33356cd98798SBarry Smith B->ops->mult = MatMult_SeqMAIJ_6; 33366cd98798SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_6; 33376cd98798SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_6; 33386cd98798SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_6; 3339ed8eea03SBarry Smith } else if (dof == 7) { 3340ed8eea03SBarry Smith B->ops->mult = MatMult_SeqMAIJ_7; 3341ed8eea03SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_7; 3342ed8eea03SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_7; 3343ed8eea03SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_7; 334466ed3db0SBarry Smith } else if (dof == 8) { 334566ed3db0SBarry Smith B->ops->mult = MatMult_SeqMAIJ_8; 334666ed3db0SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_8; 334766ed3db0SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_8; 334866ed3db0SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_8; 33492b692628SMatthew Knepley } else if (dof == 9) { 33502b692628SMatthew Knepley B->ops->mult = MatMult_SeqMAIJ_9; 33512b692628SMatthew Knepley B->ops->multadd = MatMultAdd_SeqMAIJ_9; 33522b692628SMatthew Knepley B->ops->multtranspose = MatMultTranspose_SeqMAIJ_9; 33532b692628SMatthew Knepley B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_9; 3354b9cda22cSBarry Smith } else if (dof == 10) { 3355b9cda22cSBarry Smith B->ops->mult = MatMult_SeqMAIJ_10; 3356b9cda22cSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_10; 3357b9cda22cSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_10; 3358b9cda22cSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_10; 3359dbdd7285SBarry Smith } else if (dof == 11) { 3360dbdd7285SBarry Smith B->ops->mult = MatMult_SeqMAIJ_11; 3361dbdd7285SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_11; 3362dbdd7285SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_11; 3363dbdd7285SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_11; 33642f7816d4SBarry Smith } else if (dof == 16) { 33652f7816d4SBarry Smith B->ops->mult = MatMult_SeqMAIJ_16; 33662f7816d4SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_16; 33672f7816d4SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_16; 33682f7816d4SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_16; 3369ed1c418cSBarry Smith } else if (dof == 18) { 3370ed1c418cSBarry Smith B->ops->mult = MatMult_SeqMAIJ_18; 3371ed1c418cSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_18; 3372ed1c418cSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_18; 3373ed1c418cSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_18; 337482b1193eSBarry Smith } else { 33756861f193SBarry Smith B->ops->mult = MatMult_SeqMAIJ_N; 33766861f193SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_N; 33776861f193SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_N; 33786861f193SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_N; 337982b1193eSBarry Smith } 3380bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_seqmaij_seqaij_C",MatConvert_SeqMAIJ_SeqAIJ);CHKERRQ(ierr); 3381bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaij_seqmaij_C",MatPtAP_SeqAIJ_SeqMAIJ);CHKERRQ(ierr); 3382*59e29146SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaijperm_seqmaij_C",MatPtAP_SeqAIJ_SeqMAIJ);CHKERRQ(ierr); 3383279e4bd4SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaijmkl_seqmaij_C",MatPtAP_SeqAIJ_SeqMAIJ);CHKERRQ(ierr); 3384f4a53059SBarry Smith } else { 3385f4a53059SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ*)A->data; 3386feb9fe23SJed Brown Mat_MPIMAIJ *b; 3387f4a53059SBarry Smith IS from,to; 3388f4a53059SBarry Smith Vec gvec; 3389f4a53059SBarry Smith 3390b9b97703SBarry Smith ierr = MatSetType(B,MATMPIMAIJ);CHKERRQ(ierr); 339126fbe8dcSKarl Rupp 33920298fd71SBarry Smith B->ops->setup = NULL; 3393d72c5c08SBarry Smith B->ops->destroy = MatDestroy_MPIMAIJ; 33940fd73130SBarry Smith B->ops->view = MatView_MPIMAIJ; 339526fbe8dcSKarl Rupp 3396b9b97703SBarry Smith b = (Mat_MPIMAIJ*)B->data; 3397b9b97703SBarry Smith b->dof = dof; 3398b9b97703SBarry Smith b->A = A; 339926fbe8dcSKarl Rupp 34004cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->A,dof,&b->AIJ);CHKERRQ(ierr); 34014cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->B,dof,&b->OAIJ);CHKERRQ(ierr); 34024cb9d9b8SBarry Smith 3403f4a53059SBarry Smith ierr = VecGetSize(mpiaij->lvec,&n);CHKERRQ(ierr); 3404a34bdc0bSBarry Smith ierr = VecCreate(PETSC_COMM_SELF,&b->w);CHKERRQ(ierr); 3405a34bdc0bSBarry Smith ierr = VecSetSizes(b->w,n*dof,n*dof);CHKERRQ(ierr); 340613288a74SBarry Smith ierr = VecSetBlockSize(b->w,dof);CHKERRQ(ierr); 3407a34bdc0bSBarry Smith ierr = VecSetType(b->w,VECSEQ);CHKERRQ(ierr); 3408f4a53059SBarry Smith 3409f4a53059SBarry Smith /* create two temporary Index sets for build scatter gather */ 3410ce94432eSBarry Smith ierr = ISCreateBlock(PetscObjectComm((PetscObject)A),dof,n,mpiaij->garray,PETSC_COPY_VALUES,&from);CHKERRQ(ierr); 3411f4a53059SBarry Smith ierr = ISCreateStride(PETSC_COMM_SELF,n*dof,0,1,&to);CHKERRQ(ierr); 3412f4a53059SBarry Smith 3413f4a53059SBarry Smith /* create temporary global vector to generate scatter context */ 3414ce94432eSBarry Smith ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),dof,dof*A->cmap->n,dof*A->cmap->N,NULL,&gvec);CHKERRQ(ierr); 3415f4a53059SBarry Smith 3416f4a53059SBarry Smith /* generate the scatter context */ 3417f4a53059SBarry Smith ierr = VecScatterCreate(gvec,from,b->w,to,&b->ctx);CHKERRQ(ierr); 3418f4a53059SBarry Smith 34196bf464f9SBarry Smith ierr = ISDestroy(&from);CHKERRQ(ierr); 34206bf464f9SBarry Smith ierr = ISDestroy(&to);CHKERRQ(ierr); 34216bf464f9SBarry Smith ierr = VecDestroy(&gvec);CHKERRQ(ierr); 3422f4a53059SBarry Smith 3423f4a53059SBarry Smith B->ops->mult = MatMult_MPIMAIJ_dof; 34244cb9d9b8SBarry Smith B->ops->multtranspose = MatMultTranspose_MPIMAIJ_dof; 34254cb9d9b8SBarry Smith B->ops->multadd = MatMultAdd_MPIMAIJ_dof; 34264cb9d9b8SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_MPIMAIJ_dof; 342726fbe8dcSKarl Rupp 3428bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpimaij_mpiaij_C",MatConvert_MPIMAIJ_MPIAIJ);CHKERRQ(ierr); 3429bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_mpiaij_mpimaij_C",MatPtAP_MPIAIJ_MPIMAIJ);CHKERRQ(ierr); 3430f4a53059SBarry Smith } 34317dae84e0SHong Zhang B->ops->createsubmatrix = MatCreateSubMatrix_MAIJ; 34324994cf47SJed Brown ierr = MatSetUp(B);CHKERRQ(ierr); 3433cd3bbe55SBarry Smith *maij = B; 3434146574abSBarry Smith ierr = MatViewFromOptions(B,NULL,"-mat_view");CHKERRQ(ierr); 3435d72c5c08SBarry Smith } 343682b1193eSBarry Smith PetscFunctionReturn(0); 343782b1193eSBarry Smith } 3438