1be1d678aSKris Buschelman #define PETSCMAT_DLL 2be1d678aSKris Buschelman 382b1193eSBarry Smith /* 4cd3bbe55SBarry Smith Defines the basic matrix operations for the MAIJ matrix storage format. 5cd3bbe55SBarry Smith This format is used for restriction and interpolation operations for 6cd3bbe55SBarry Smith multicomponent problems. It interpolates each component the same way 7cd3bbe55SBarry Smith independently. 8cd3bbe55SBarry Smith 9cd3bbe55SBarry Smith We provide: 10cd3bbe55SBarry Smith MatMult() 11cd3bbe55SBarry Smith MatMultTranspose() 12cd3bbe55SBarry Smith MatMultTransposeAdd() 13cd3bbe55SBarry Smith MatMultAdd() 14cd3bbe55SBarry Smith and 15cd3bbe55SBarry Smith MatCreateMAIJ(Mat,dof,Mat*) 16f4a53059SBarry Smith 17f4a53059SBarry Smith This single directory handles both the sequential and parallel codes 1882b1193eSBarry Smith */ 1982b1193eSBarry Smith 20be911618SKris Buschelman #include "src/mat/impls/maij/maij.h" 217ba1a0bfSKris Buschelman #include "src/mat/utils/freespace.h" 221d8d5f9aSSatish Balay #include "private/vecimpl.h" 2382b1193eSBarry Smith 244a2ae208SSatish Balay #undef __FUNCT__ 254a2ae208SSatish Balay #define __FUNCT__ "MatMAIJGetAIJ" 26be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatMAIJGetAIJ(Mat A,Mat *B) 27b9b97703SBarry Smith { 28dfbe8321SBarry Smith PetscErrorCode ierr; 29b9b97703SBarry Smith PetscTruth ismpimaij,isseqmaij; 30b9b97703SBarry Smith 31b9b97703SBarry Smith PetscFunctionBegin; 32b9b97703SBarry Smith ierr = PetscTypeCompare((PetscObject)A,MATMPIMAIJ,&ismpimaij);CHKERRQ(ierr); 33b9b97703SBarry Smith ierr = PetscTypeCompare((PetscObject)A,MATSEQMAIJ,&isseqmaij);CHKERRQ(ierr); 34b9b97703SBarry Smith if (ismpimaij) { 35b9b97703SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 36b9b97703SBarry Smith 37b9b97703SBarry Smith *B = b->A; 38b9b97703SBarry Smith } else if (isseqmaij) { 39b9b97703SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 40b9b97703SBarry Smith 41b9b97703SBarry Smith *B = b->AIJ; 42b9b97703SBarry Smith } else { 43b9b97703SBarry Smith *B = A; 44b9b97703SBarry Smith } 45b9b97703SBarry Smith PetscFunctionReturn(0); 46b9b97703SBarry Smith } 47b9b97703SBarry Smith 484a2ae208SSatish Balay #undef __FUNCT__ 494a2ae208SSatish Balay #define __FUNCT__ "MatMAIJRedimension" 50be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatMAIJRedimension(Mat A,PetscInt dof,Mat *B) 51b9b97703SBarry Smith { 52dfbe8321SBarry Smith PetscErrorCode ierr; 53b9b97703SBarry Smith Mat Aij; 54b9b97703SBarry Smith 55b9b97703SBarry Smith PetscFunctionBegin; 56b9b97703SBarry Smith ierr = MatMAIJGetAIJ(A,&Aij);CHKERRQ(ierr); 57b9b97703SBarry Smith ierr = MatCreateMAIJ(Aij,dof,B);CHKERRQ(ierr); 58b9b97703SBarry Smith PetscFunctionReturn(0); 59b9b97703SBarry Smith } 60b9b97703SBarry Smith 614a2ae208SSatish Balay #undef __FUNCT__ 624a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_SeqMAIJ" 63dfbe8321SBarry Smith PetscErrorCode MatDestroy_SeqMAIJ(Mat A) 6482b1193eSBarry Smith { 65dfbe8321SBarry Smith PetscErrorCode ierr; 664cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 6782b1193eSBarry Smith 6882b1193eSBarry Smith PetscFunctionBegin; 69cd3bbe55SBarry Smith if (b->AIJ) { 70cd3bbe55SBarry Smith ierr = MatDestroy(b->AIJ);CHKERRQ(ierr); 7182b1193eSBarry Smith } 724cb9d9b8SBarry Smith ierr = PetscFree(b);CHKERRQ(ierr); 734cb9d9b8SBarry Smith PetscFunctionReturn(0); 744cb9d9b8SBarry Smith } 754cb9d9b8SBarry Smith 764a2ae208SSatish Balay #undef __FUNCT__ 770fd73130SBarry Smith #define __FUNCT__ "MatView_SeqMAIJ" 780fd73130SBarry Smith PetscErrorCode MatView_SeqMAIJ(Mat A,PetscViewer viewer) 790fd73130SBarry Smith { 800fd73130SBarry Smith PetscErrorCode ierr; 810fd73130SBarry Smith Mat B; 820fd73130SBarry Smith 830fd73130SBarry Smith PetscFunctionBegin; 84ceb03754SKris Buschelman ierr = MatConvert(A,MATSEQAIJ,MAT_INITIAL_MATRIX,&B); 850fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 860fd73130SBarry Smith ierr = MatDestroy(B);CHKERRQ(ierr); 870fd73130SBarry Smith PetscFunctionReturn(0); 880fd73130SBarry Smith } 890fd73130SBarry Smith 900fd73130SBarry Smith #undef __FUNCT__ 910fd73130SBarry Smith #define __FUNCT__ "MatView_MPIMAIJ" 920fd73130SBarry Smith PetscErrorCode MatView_MPIMAIJ(Mat A,PetscViewer viewer) 930fd73130SBarry Smith { 940fd73130SBarry Smith PetscErrorCode ierr; 950fd73130SBarry Smith Mat B; 960fd73130SBarry Smith 970fd73130SBarry Smith PetscFunctionBegin; 98ceb03754SKris Buschelman ierr = MatConvert(A,MATMPIAIJ,MAT_INITIAL_MATRIX,&B); 990fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 1000fd73130SBarry Smith ierr = MatDestroy(B);CHKERRQ(ierr); 1010fd73130SBarry Smith PetscFunctionReturn(0); 1020fd73130SBarry Smith } 1030fd73130SBarry Smith 1040fd73130SBarry Smith #undef __FUNCT__ 1054a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_MPIMAIJ" 106dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIMAIJ(Mat A) 1074cb9d9b8SBarry Smith { 108dfbe8321SBarry Smith PetscErrorCode ierr; 1094cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1104cb9d9b8SBarry Smith 1114cb9d9b8SBarry Smith PetscFunctionBegin; 1124cb9d9b8SBarry Smith if (b->AIJ) { 1134cb9d9b8SBarry Smith ierr = MatDestroy(b->AIJ);CHKERRQ(ierr); 1144cb9d9b8SBarry Smith } 115f4a53059SBarry Smith if (b->OAIJ) { 116f4a53059SBarry Smith ierr = MatDestroy(b->OAIJ);CHKERRQ(ierr); 117f4a53059SBarry Smith } 118b9b97703SBarry Smith if (b->A) { 119b9b97703SBarry Smith ierr = MatDestroy(b->A);CHKERRQ(ierr); 120b9b97703SBarry Smith } 121f4a53059SBarry Smith if (b->ctx) { 122f4a53059SBarry Smith ierr = VecScatterDestroy(b->ctx);CHKERRQ(ierr); 123f4a53059SBarry Smith } 124f4a53059SBarry Smith if (b->w) { 125f4a53059SBarry Smith ierr = VecDestroy(b->w);CHKERRQ(ierr); 126f4a53059SBarry Smith } 127cd3bbe55SBarry Smith ierr = PetscFree(b);CHKERRQ(ierr); 128dbd8c25aSHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,0);CHKERRQ(ierr); 129b9b97703SBarry Smith PetscFunctionReturn(0); 130b9b97703SBarry Smith } 131b9b97703SBarry Smith 1320bad9183SKris Buschelman /*MC 133fafad747SKris Buschelman MATMAIJ - MATMAIJ = "maij" - A matrix type to be used for restriction and interpolation operations for 1340bad9183SKris Buschelman multicomponent problems, interpolating or restricting each component the same way independently. 1350bad9183SKris Buschelman The matrix type is based on MATSEQAIJ for sequential matrices, and MATMPIAIJ for distributed matrices. 1360bad9183SKris Buschelman 1370bad9183SKris Buschelman Operations provided: 1380bad9183SKris Buschelman . MatMult 1390bad9183SKris Buschelman . MatMultTranspose 1400bad9183SKris Buschelman . MatMultAdd 1410bad9183SKris Buschelman . MatMultTransposeAdd 1420bad9183SKris Buschelman 1430bad9183SKris Buschelman Level: advanced 1440bad9183SKris Buschelman 1450bad9183SKris Buschelman .seealso: MatCreateSeqDense 1460bad9183SKris Buschelman M*/ 1470bad9183SKris Buschelman 14882b1193eSBarry Smith EXTERN_C_BEGIN 1494a2ae208SSatish Balay #undef __FUNCT__ 1504a2ae208SSatish Balay #define __FUNCT__ "MatCreate_MAIJ" 151be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatCreate_MAIJ(Mat A) 15282b1193eSBarry Smith { 153dfbe8321SBarry Smith PetscErrorCode ierr; 1544cb9d9b8SBarry Smith Mat_MPIMAIJ *b; 15564b52464SHong Zhang PetscMPIInt size; 15682b1193eSBarry Smith 15782b1193eSBarry Smith PetscFunctionBegin; 15838f2d2fdSLisandro Dalcin ierr = PetscNewLog(A,Mat_MPIMAIJ,&b);CHKERRQ(ierr); 159b0a32e0cSBarry Smith A->data = (void*)b; 160cd3bbe55SBarry Smith ierr = PetscMemzero(A->ops,sizeof(struct _MatOps));CHKERRQ(ierr); 161cd3bbe55SBarry Smith A->factor = 0; 162cd3bbe55SBarry Smith A->mapping = 0; 163f4a53059SBarry Smith 164cd3bbe55SBarry Smith b->AIJ = 0; 165cd3bbe55SBarry Smith b->dof = 0; 166f4a53059SBarry Smith b->OAIJ = 0; 167f4a53059SBarry Smith b->ctx = 0; 168f4a53059SBarry Smith b->w = 0; 169*7adad957SLisandro Dalcin ierr = MPI_Comm_size(((PetscObject)A)->comm,&size);CHKERRQ(ierr); 17064b52464SHong Zhang if (size == 1){ 17164b52464SHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,MATSEQMAIJ);CHKERRQ(ierr); 17264b52464SHong Zhang } else { 17364b52464SHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,MATMPIMAIJ);CHKERRQ(ierr); 17464b52464SHong Zhang } 17582b1193eSBarry Smith PetscFunctionReturn(0); 17682b1193eSBarry Smith } 17782b1193eSBarry Smith EXTERN_C_END 17882b1193eSBarry Smith 179cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 1804a2ae208SSatish Balay #undef __FUNCT__ 181b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_2" 182dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 18382b1193eSBarry Smith { 1844cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 185bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 18687828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2; 187dfbe8321SBarry Smith PetscErrorCode ierr; 188b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 189b24ad042SBarry Smith PetscInt n,i,jrow,j; 19082b1193eSBarry Smith 191bcc973b7SBarry Smith PetscFunctionBegin; 1921ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1931ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 194bcc973b7SBarry Smith idx = a->j; 195bcc973b7SBarry Smith v = a->a; 196bcc973b7SBarry Smith ii = a->i; 197bcc973b7SBarry Smith 198bcc973b7SBarry Smith for (i=0; i<m; i++) { 199bcc973b7SBarry Smith jrow = ii[i]; 200bcc973b7SBarry Smith n = ii[i+1] - jrow; 201bcc973b7SBarry Smith sum1 = 0.0; 202bcc973b7SBarry Smith sum2 = 0.0; 203b3c51c66SMatthew Knepley nonzerorow += (n>0); 204bcc973b7SBarry Smith for (j=0; j<n; j++) { 205bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 206bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 207bcc973b7SBarry Smith jrow++; 208bcc973b7SBarry Smith } 209bcc973b7SBarry Smith y[2*i] = sum1; 210bcc973b7SBarry Smith y[2*i+1] = sum2; 211bcc973b7SBarry Smith } 212bcc973b7SBarry Smith 213b3c51c66SMatthew Knepley ierr = PetscLogFlops(4*a->nz - 2*nonzerorow);CHKERRQ(ierr); 2141ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2151ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 21682b1193eSBarry Smith PetscFunctionReturn(0); 21782b1193eSBarry Smith } 218bcc973b7SBarry Smith 2194a2ae208SSatish Balay #undef __FUNCT__ 220b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_2" 221dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 22282b1193eSBarry Smith { 2234cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 224bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 22587828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,zero = 0.0; 226dfbe8321SBarry Smith PetscErrorCode ierr; 227899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 22882b1193eSBarry Smith 229bcc973b7SBarry Smith PetscFunctionBegin; 2302dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 2311ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2321ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 233bfec09a0SHong Zhang 234bcc973b7SBarry Smith for (i=0; i<m; i++) { 235bfec09a0SHong Zhang idx = a->j + a->i[i] ; 236bfec09a0SHong Zhang v = a->a + a->i[i] ; 237bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 238bcc973b7SBarry Smith alpha1 = x[2*i]; 239bcc973b7SBarry Smith alpha2 = x[2*i+1]; 240bcc973b7SBarry Smith while (n-->0) {y[2*(*idx)] += alpha1*(*v); y[2*(*idx)+1] += alpha2*(*v); idx++; v++;} 241bcc973b7SBarry Smith } 242b3c51c66SMatthew Knepley ierr = PetscLogFlops(4*a->nz);CHKERRQ(ierr); 2431ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2441ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 24582b1193eSBarry Smith PetscFunctionReturn(0); 24682b1193eSBarry Smith } 247bcc973b7SBarry Smith 2484a2ae208SSatish Balay #undef __FUNCT__ 249b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_2" 250dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 25182b1193eSBarry Smith { 2524cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 253bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 25487828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2; 255dfbe8321SBarry Smith PetscErrorCode ierr; 256899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 257b24ad042SBarry Smith PetscInt n,i,jrow,j; 25882b1193eSBarry Smith 259bcc973b7SBarry Smith PetscFunctionBegin; 260f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 2611ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2621ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 263bcc973b7SBarry Smith idx = a->j; 264bcc973b7SBarry Smith v = a->a; 265bcc973b7SBarry Smith ii = a->i; 266bcc973b7SBarry Smith 267bcc973b7SBarry Smith for (i=0; i<m; i++) { 268bcc973b7SBarry Smith jrow = ii[i]; 269bcc973b7SBarry Smith n = ii[i+1] - jrow; 270bcc973b7SBarry Smith sum1 = 0.0; 271bcc973b7SBarry Smith sum2 = 0.0; 272bcc973b7SBarry Smith for (j=0; j<n; j++) { 273bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 274bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 275bcc973b7SBarry Smith jrow++; 276bcc973b7SBarry Smith } 277bcc973b7SBarry Smith y[2*i] += sum1; 278bcc973b7SBarry Smith y[2*i+1] += sum2; 279bcc973b7SBarry Smith } 280bcc973b7SBarry Smith 281b3c51c66SMatthew Knepley ierr = PetscLogFlops(4*a->nz);CHKERRQ(ierr); 2821ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2831ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 284bcc973b7SBarry Smith PetscFunctionReturn(0); 28582b1193eSBarry Smith } 2864a2ae208SSatish Balay #undef __FUNCT__ 287b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_2" 288dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 28982b1193eSBarry Smith { 2904cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 291bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 29287828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2; 293dfbe8321SBarry Smith PetscErrorCode ierr; 294899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 29582b1193eSBarry Smith 296bcc973b7SBarry Smith PetscFunctionBegin; 297f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 2981ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2991ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 300bfec09a0SHong Zhang 301bcc973b7SBarry Smith for (i=0; i<m; i++) { 302bfec09a0SHong Zhang idx = a->j + a->i[i] ; 303bfec09a0SHong Zhang v = a->a + a->i[i] ; 304bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 305bcc973b7SBarry Smith alpha1 = x[2*i]; 306bcc973b7SBarry Smith alpha2 = x[2*i+1]; 307bcc973b7SBarry Smith while (n-->0) {y[2*(*idx)] += alpha1*(*v); y[2*(*idx)+1] += alpha2*(*v); idx++; v++;} 308bcc973b7SBarry Smith } 309b3c51c66SMatthew Knepley ierr = PetscLogFlops(4*a->nz);CHKERRQ(ierr); 3101ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3111ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 312bcc973b7SBarry Smith PetscFunctionReturn(0); 31382b1193eSBarry Smith } 314cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 3154a2ae208SSatish Balay #undef __FUNCT__ 316b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_3" 317dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 318bcc973b7SBarry Smith { 3194cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 320bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 32187828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3; 322dfbe8321SBarry Smith PetscErrorCode ierr; 323b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 324b24ad042SBarry Smith PetscInt n,i,jrow,j; 32582b1193eSBarry Smith 326bcc973b7SBarry Smith PetscFunctionBegin; 3271ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3281ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 329bcc973b7SBarry Smith idx = a->j; 330bcc973b7SBarry Smith v = a->a; 331bcc973b7SBarry Smith ii = a->i; 332bcc973b7SBarry Smith 333bcc973b7SBarry Smith for (i=0; i<m; i++) { 334bcc973b7SBarry Smith jrow = ii[i]; 335bcc973b7SBarry Smith n = ii[i+1] - jrow; 336bcc973b7SBarry Smith sum1 = 0.0; 337bcc973b7SBarry Smith sum2 = 0.0; 338bcc973b7SBarry Smith sum3 = 0.0; 339b3c51c66SMatthew Knepley nonzerorow += (n>0); 340bcc973b7SBarry Smith for (j=0; j<n; j++) { 341bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 342bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 343bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 344bcc973b7SBarry Smith jrow++; 345bcc973b7SBarry Smith } 346bcc973b7SBarry Smith y[3*i] = sum1; 347bcc973b7SBarry Smith y[3*i+1] = sum2; 348bcc973b7SBarry Smith y[3*i+2] = sum3; 349bcc973b7SBarry Smith } 350bcc973b7SBarry Smith 351b3c51c66SMatthew Knepley ierr = PetscLogFlops(6*a->nz - 3*nonzerorow);CHKERRQ(ierr); 3521ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3531ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 354bcc973b7SBarry Smith PetscFunctionReturn(0); 355bcc973b7SBarry Smith } 356bcc973b7SBarry Smith 3574a2ae208SSatish Balay #undef __FUNCT__ 358b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_3" 359dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 360bcc973b7SBarry Smith { 3614cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 362bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 36387828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,zero = 0.0; 364dfbe8321SBarry Smith PetscErrorCode ierr; 365899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 366bcc973b7SBarry Smith 367bcc973b7SBarry Smith PetscFunctionBegin; 3682dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 3691ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3701ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 371bfec09a0SHong Zhang 372bcc973b7SBarry Smith for (i=0; i<m; i++) { 373bfec09a0SHong Zhang idx = a->j + a->i[i]; 374bfec09a0SHong Zhang v = a->a + a->i[i]; 375bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 376bcc973b7SBarry Smith alpha1 = x[3*i]; 377bcc973b7SBarry Smith alpha2 = x[3*i+1]; 378bcc973b7SBarry Smith alpha3 = x[3*i+2]; 379bcc973b7SBarry Smith while (n-->0) { 380bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 381bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 382bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 383bcc973b7SBarry Smith idx++; v++; 384bcc973b7SBarry Smith } 385bcc973b7SBarry Smith } 386b3c51c66SMatthew Knepley ierr = PetscLogFlops(6*a->nz);CHKERRQ(ierr); 3871ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3881ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 389bcc973b7SBarry Smith PetscFunctionReturn(0); 390bcc973b7SBarry Smith } 391bcc973b7SBarry Smith 3924a2ae208SSatish Balay #undef __FUNCT__ 393b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_3" 394dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 395bcc973b7SBarry Smith { 3964cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 397bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 39887828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3; 399dfbe8321SBarry Smith PetscErrorCode ierr; 400899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 401b24ad042SBarry Smith PetscInt n,i,jrow,j; 402bcc973b7SBarry Smith 403bcc973b7SBarry Smith PetscFunctionBegin; 404f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 4051ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 4061ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 407bcc973b7SBarry Smith idx = a->j; 408bcc973b7SBarry Smith v = a->a; 409bcc973b7SBarry Smith ii = a->i; 410bcc973b7SBarry Smith 411bcc973b7SBarry Smith for (i=0; i<m; i++) { 412bcc973b7SBarry Smith jrow = ii[i]; 413bcc973b7SBarry Smith n = ii[i+1] - jrow; 414bcc973b7SBarry Smith sum1 = 0.0; 415bcc973b7SBarry Smith sum2 = 0.0; 416bcc973b7SBarry Smith sum3 = 0.0; 417bcc973b7SBarry Smith for (j=0; j<n; j++) { 418bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 419bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 420bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 421bcc973b7SBarry Smith jrow++; 422bcc973b7SBarry Smith } 423bcc973b7SBarry Smith y[3*i] += sum1; 424bcc973b7SBarry Smith y[3*i+1] += sum2; 425bcc973b7SBarry Smith y[3*i+2] += sum3; 426bcc973b7SBarry Smith } 427bcc973b7SBarry Smith 428efee365bSSatish Balay ierr = PetscLogFlops(6*a->nz);CHKERRQ(ierr); 4291ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 4301ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 431bcc973b7SBarry Smith PetscFunctionReturn(0); 432bcc973b7SBarry Smith } 4334a2ae208SSatish Balay #undef __FUNCT__ 434b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_3" 435dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 436bcc973b7SBarry Smith { 4374cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 438bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 43987828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3; 440dfbe8321SBarry Smith PetscErrorCode ierr; 441899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 442bcc973b7SBarry Smith 443bcc973b7SBarry Smith PetscFunctionBegin; 444f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 4451ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 4461ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 447bcc973b7SBarry Smith for (i=0; i<m; i++) { 448bfec09a0SHong Zhang idx = a->j + a->i[i] ; 449bfec09a0SHong Zhang v = a->a + a->i[i] ; 450bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 451bcc973b7SBarry Smith alpha1 = x[3*i]; 452bcc973b7SBarry Smith alpha2 = x[3*i+1]; 453bcc973b7SBarry Smith alpha3 = x[3*i+2]; 454bcc973b7SBarry Smith while (n-->0) { 455bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 456bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 457bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 458bcc973b7SBarry Smith idx++; v++; 459bcc973b7SBarry Smith } 460bcc973b7SBarry Smith } 461efee365bSSatish Balay ierr = PetscLogFlops(6*a->nz);CHKERRQ(ierr); 4621ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 4631ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 464bcc973b7SBarry Smith PetscFunctionReturn(0); 465bcc973b7SBarry Smith } 466bcc973b7SBarry Smith 467bcc973b7SBarry Smith /* ------------------------------------------------------------------------------*/ 4684a2ae208SSatish Balay #undef __FUNCT__ 469b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_4" 470dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 471bcc973b7SBarry Smith { 4724cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 473bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 47487828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4; 475dfbe8321SBarry Smith PetscErrorCode ierr; 476b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 477b24ad042SBarry Smith PetscInt n,i,jrow,j; 478bcc973b7SBarry Smith 479bcc973b7SBarry Smith PetscFunctionBegin; 4801ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 4811ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 482bcc973b7SBarry Smith idx = a->j; 483bcc973b7SBarry Smith v = a->a; 484bcc973b7SBarry Smith ii = a->i; 485bcc973b7SBarry Smith 486bcc973b7SBarry Smith for (i=0; i<m; i++) { 487bcc973b7SBarry Smith jrow = ii[i]; 488bcc973b7SBarry Smith n = ii[i+1] - jrow; 489bcc973b7SBarry Smith sum1 = 0.0; 490bcc973b7SBarry Smith sum2 = 0.0; 491bcc973b7SBarry Smith sum3 = 0.0; 492bcc973b7SBarry Smith sum4 = 0.0; 493b3c51c66SMatthew Knepley nonzerorow += (n>0); 494bcc973b7SBarry Smith for (j=0; j<n; j++) { 495bcc973b7SBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 496bcc973b7SBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 497bcc973b7SBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 498bcc973b7SBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 499bcc973b7SBarry Smith jrow++; 500bcc973b7SBarry Smith } 501bcc973b7SBarry Smith y[4*i] = sum1; 502bcc973b7SBarry Smith y[4*i+1] = sum2; 503bcc973b7SBarry Smith y[4*i+2] = sum3; 504bcc973b7SBarry Smith y[4*i+3] = sum4; 505bcc973b7SBarry Smith } 506bcc973b7SBarry Smith 507b3c51c66SMatthew Knepley ierr = PetscLogFlops(8*a->nz - 4*nonzerorow);CHKERRQ(ierr); 5081ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 5091ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 510bcc973b7SBarry Smith PetscFunctionReturn(0); 511bcc973b7SBarry Smith } 512bcc973b7SBarry Smith 5134a2ae208SSatish Balay #undef __FUNCT__ 514b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_4" 515dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 516bcc973b7SBarry Smith { 5174cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 518bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 51987828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,zero = 0.0; 520dfbe8321SBarry Smith PetscErrorCode ierr; 521899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 522bcc973b7SBarry Smith 523bcc973b7SBarry Smith PetscFunctionBegin; 5242dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 5251ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 5261ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 527bcc973b7SBarry Smith for (i=0; i<m; i++) { 528bfec09a0SHong Zhang idx = a->j + a->i[i] ; 529bfec09a0SHong Zhang v = a->a + a->i[i] ; 530bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 531bcc973b7SBarry Smith alpha1 = x[4*i]; 532bcc973b7SBarry Smith alpha2 = x[4*i+1]; 533bcc973b7SBarry Smith alpha3 = x[4*i+2]; 534bcc973b7SBarry Smith alpha4 = x[4*i+3]; 535bcc973b7SBarry Smith while (n-->0) { 536bcc973b7SBarry Smith y[4*(*idx)] += alpha1*(*v); 537bcc973b7SBarry Smith y[4*(*idx)+1] += alpha2*(*v); 538bcc973b7SBarry Smith y[4*(*idx)+2] += alpha3*(*v); 539bcc973b7SBarry Smith y[4*(*idx)+3] += alpha4*(*v); 540bcc973b7SBarry Smith idx++; v++; 541bcc973b7SBarry Smith } 542bcc973b7SBarry Smith } 543b3c51c66SMatthew Knepley ierr = PetscLogFlops(8*a->nz);CHKERRQ(ierr); 5441ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 5451ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 546bcc973b7SBarry Smith PetscFunctionReturn(0); 547bcc973b7SBarry Smith } 548bcc973b7SBarry Smith 5494a2ae208SSatish Balay #undef __FUNCT__ 550b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_4" 551dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 552bcc973b7SBarry Smith { 5534cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 554f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 55587828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4; 556dfbe8321SBarry Smith PetscErrorCode ierr; 557899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 558b24ad042SBarry Smith PetscInt n,i,jrow,j; 559f9fae5adSBarry Smith 560f9fae5adSBarry Smith PetscFunctionBegin; 561f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 5621ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 5631ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 564f9fae5adSBarry Smith idx = a->j; 565f9fae5adSBarry Smith v = a->a; 566f9fae5adSBarry Smith ii = a->i; 567f9fae5adSBarry Smith 568f9fae5adSBarry Smith for (i=0; i<m; i++) { 569f9fae5adSBarry Smith jrow = ii[i]; 570f9fae5adSBarry Smith n = ii[i+1] - jrow; 571f9fae5adSBarry Smith sum1 = 0.0; 572f9fae5adSBarry Smith sum2 = 0.0; 573f9fae5adSBarry Smith sum3 = 0.0; 574f9fae5adSBarry Smith sum4 = 0.0; 575f9fae5adSBarry Smith for (j=0; j<n; j++) { 576f9fae5adSBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 577f9fae5adSBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 578f9fae5adSBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 579f9fae5adSBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 580f9fae5adSBarry Smith jrow++; 581f9fae5adSBarry Smith } 582f9fae5adSBarry Smith y[4*i] += sum1; 583f9fae5adSBarry Smith y[4*i+1] += sum2; 584f9fae5adSBarry Smith y[4*i+2] += sum3; 585f9fae5adSBarry Smith y[4*i+3] += sum4; 586f9fae5adSBarry Smith } 587f9fae5adSBarry Smith 588b3c51c66SMatthew Knepley ierr = PetscLogFlops(8*a->nz);CHKERRQ(ierr); 5891ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 5901ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 591f9fae5adSBarry Smith PetscFunctionReturn(0); 592bcc973b7SBarry Smith } 5934a2ae208SSatish Balay #undef __FUNCT__ 594b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_4" 595dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 596bcc973b7SBarry Smith { 5974cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 598f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 59987828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4; 600dfbe8321SBarry Smith PetscErrorCode ierr; 601899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 602f9fae5adSBarry Smith 603f9fae5adSBarry Smith PetscFunctionBegin; 604f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 6051ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 6061ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 607bfec09a0SHong Zhang 608f9fae5adSBarry Smith for (i=0; i<m; i++) { 609bfec09a0SHong Zhang idx = a->j + a->i[i] ; 610bfec09a0SHong Zhang v = a->a + a->i[i] ; 611f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 612f9fae5adSBarry Smith alpha1 = x[4*i]; 613f9fae5adSBarry Smith alpha2 = x[4*i+1]; 614f9fae5adSBarry Smith alpha3 = x[4*i+2]; 615f9fae5adSBarry Smith alpha4 = x[4*i+3]; 616f9fae5adSBarry Smith while (n-->0) { 617f9fae5adSBarry Smith y[4*(*idx)] += alpha1*(*v); 618f9fae5adSBarry Smith y[4*(*idx)+1] += alpha2*(*v); 619f9fae5adSBarry Smith y[4*(*idx)+2] += alpha3*(*v); 620f9fae5adSBarry Smith y[4*(*idx)+3] += alpha4*(*v); 621f9fae5adSBarry Smith idx++; v++; 622f9fae5adSBarry Smith } 623f9fae5adSBarry Smith } 624b3c51c66SMatthew Knepley ierr = PetscLogFlops(8*a->nz);CHKERRQ(ierr); 6251ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 6261ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 627f9fae5adSBarry Smith PetscFunctionReturn(0); 628f9fae5adSBarry Smith } 629f9fae5adSBarry Smith /* ------------------------------------------------------------------------------*/ 6306cd98798SBarry Smith 6314a2ae208SSatish Balay #undef __FUNCT__ 632b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_5" 633dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 634f9fae5adSBarry Smith { 6354cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 636f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 63787828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5; 638dfbe8321SBarry Smith PetscErrorCode ierr; 639b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 640b24ad042SBarry Smith PetscInt n,i,jrow,j; 641f9fae5adSBarry Smith 642f9fae5adSBarry Smith PetscFunctionBegin; 6431ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 6441ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 645f9fae5adSBarry Smith idx = a->j; 646f9fae5adSBarry Smith v = a->a; 647f9fae5adSBarry Smith ii = a->i; 648f9fae5adSBarry Smith 649f9fae5adSBarry Smith for (i=0; i<m; i++) { 650f9fae5adSBarry Smith jrow = ii[i]; 651f9fae5adSBarry Smith n = ii[i+1] - jrow; 652f9fae5adSBarry Smith sum1 = 0.0; 653f9fae5adSBarry Smith sum2 = 0.0; 654f9fae5adSBarry Smith sum3 = 0.0; 655f9fae5adSBarry Smith sum4 = 0.0; 656f9fae5adSBarry Smith sum5 = 0.0; 657b3c51c66SMatthew Knepley nonzerorow += (n>0); 658f9fae5adSBarry Smith for (j=0; j<n; j++) { 659f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 660f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 661f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 662f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 663f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 664f9fae5adSBarry Smith jrow++; 665f9fae5adSBarry Smith } 666f9fae5adSBarry Smith y[5*i] = sum1; 667f9fae5adSBarry Smith y[5*i+1] = sum2; 668f9fae5adSBarry Smith y[5*i+2] = sum3; 669f9fae5adSBarry Smith y[5*i+3] = sum4; 670f9fae5adSBarry Smith y[5*i+4] = sum5; 671f9fae5adSBarry Smith } 672f9fae5adSBarry Smith 673b3c51c66SMatthew Knepley ierr = PetscLogFlops(10*a->nz - 5*nonzerorow);CHKERRQ(ierr); 6741ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 6751ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 676f9fae5adSBarry Smith PetscFunctionReturn(0); 677f9fae5adSBarry Smith } 678f9fae5adSBarry Smith 6794a2ae208SSatish Balay #undef __FUNCT__ 680b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_5" 681dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 682f9fae5adSBarry Smith { 6834cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 684f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 68587828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,zero = 0.0; 686dfbe8321SBarry Smith PetscErrorCode ierr; 687899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 688f9fae5adSBarry Smith 689f9fae5adSBarry Smith PetscFunctionBegin; 6902dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 6911ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 6921ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 693bfec09a0SHong Zhang 694f9fae5adSBarry Smith for (i=0; i<m; i++) { 695bfec09a0SHong Zhang idx = a->j + a->i[i] ; 696bfec09a0SHong Zhang v = a->a + a->i[i] ; 697f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 698f9fae5adSBarry Smith alpha1 = x[5*i]; 699f9fae5adSBarry Smith alpha2 = x[5*i+1]; 700f9fae5adSBarry Smith alpha3 = x[5*i+2]; 701f9fae5adSBarry Smith alpha4 = x[5*i+3]; 702f9fae5adSBarry Smith alpha5 = x[5*i+4]; 703f9fae5adSBarry Smith while (n-->0) { 704f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 705f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 706f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 707f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 708f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 709f9fae5adSBarry Smith idx++; v++; 710f9fae5adSBarry Smith } 711f9fae5adSBarry Smith } 712b3c51c66SMatthew Knepley ierr = PetscLogFlops(10*a->nz);CHKERRQ(ierr); 7131ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 7141ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 715f9fae5adSBarry Smith PetscFunctionReturn(0); 716f9fae5adSBarry Smith } 717f9fae5adSBarry Smith 7184a2ae208SSatish Balay #undef __FUNCT__ 719b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_5" 720dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 721f9fae5adSBarry Smith { 7224cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 723f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 72487828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5; 725dfbe8321SBarry Smith PetscErrorCode ierr; 726899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 727b24ad042SBarry Smith PetscInt n,i,jrow,j; 728f9fae5adSBarry Smith 729f9fae5adSBarry Smith PetscFunctionBegin; 730f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 7311ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 7321ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 733f9fae5adSBarry Smith idx = a->j; 734f9fae5adSBarry Smith v = a->a; 735f9fae5adSBarry Smith ii = a->i; 736f9fae5adSBarry Smith 737f9fae5adSBarry Smith for (i=0; i<m; i++) { 738f9fae5adSBarry Smith jrow = ii[i]; 739f9fae5adSBarry Smith n = ii[i+1] - jrow; 740f9fae5adSBarry Smith sum1 = 0.0; 741f9fae5adSBarry Smith sum2 = 0.0; 742f9fae5adSBarry Smith sum3 = 0.0; 743f9fae5adSBarry Smith sum4 = 0.0; 744f9fae5adSBarry Smith sum5 = 0.0; 745f9fae5adSBarry Smith for (j=0; j<n; j++) { 746f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 747f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 748f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 749f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 750f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 751f9fae5adSBarry Smith jrow++; 752f9fae5adSBarry Smith } 753f9fae5adSBarry Smith y[5*i] += sum1; 754f9fae5adSBarry Smith y[5*i+1] += sum2; 755f9fae5adSBarry Smith y[5*i+2] += sum3; 756f9fae5adSBarry Smith y[5*i+3] += sum4; 757f9fae5adSBarry Smith y[5*i+4] += sum5; 758f9fae5adSBarry Smith } 759f9fae5adSBarry Smith 760efee365bSSatish Balay ierr = PetscLogFlops(10*a->nz);CHKERRQ(ierr); 7611ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 7621ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 763f9fae5adSBarry Smith PetscFunctionReturn(0); 764f9fae5adSBarry Smith } 765f9fae5adSBarry Smith 7664a2ae208SSatish Balay #undef __FUNCT__ 767b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_5" 768dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 769f9fae5adSBarry Smith { 7704cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 771f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 77287828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5; 773dfbe8321SBarry Smith PetscErrorCode ierr; 774899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 775f9fae5adSBarry Smith 776f9fae5adSBarry Smith PetscFunctionBegin; 777f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 7781ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 7791ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 780bfec09a0SHong Zhang 781f9fae5adSBarry Smith for (i=0; i<m; i++) { 782bfec09a0SHong Zhang idx = a->j + a->i[i] ; 783bfec09a0SHong Zhang v = a->a + a->i[i] ; 784f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 785f9fae5adSBarry Smith alpha1 = x[5*i]; 786f9fae5adSBarry Smith alpha2 = x[5*i+1]; 787f9fae5adSBarry Smith alpha3 = x[5*i+2]; 788f9fae5adSBarry Smith alpha4 = x[5*i+3]; 789f9fae5adSBarry Smith alpha5 = x[5*i+4]; 790f9fae5adSBarry Smith while (n-->0) { 791f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 792f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 793f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 794f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 795f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 796f9fae5adSBarry Smith idx++; v++; 797f9fae5adSBarry Smith } 798f9fae5adSBarry Smith } 799efee365bSSatish Balay ierr = PetscLogFlops(10*a->nz);CHKERRQ(ierr); 8001ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 8011ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 802f9fae5adSBarry Smith PetscFunctionReturn(0); 803bcc973b7SBarry Smith } 804bcc973b7SBarry Smith 8056cd98798SBarry Smith /* ------------------------------------------------------------------------------*/ 8064a2ae208SSatish Balay #undef __FUNCT__ 807b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_6" 808dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 8096cd98798SBarry Smith { 8106cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8116cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 81287828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6; 813dfbe8321SBarry Smith PetscErrorCode ierr; 814b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 815b24ad042SBarry Smith PetscInt n,i,jrow,j; 8166cd98798SBarry Smith 8176cd98798SBarry Smith PetscFunctionBegin; 8181ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8191ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 8206cd98798SBarry Smith idx = a->j; 8216cd98798SBarry Smith v = a->a; 8226cd98798SBarry Smith ii = a->i; 8236cd98798SBarry Smith 8246cd98798SBarry Smith for (i=0; i<m; i++) { 8256cd98798SBarry Smith jrow = ii[i]; 8266cd98798SBarry Smith n = ii[i+1] - jrow; 8276cd98798SBarry Smith sum1 = 0.0; 8286cd98798SBarry Smith sum2 = 0.0; 8296cd98798SBarry Smith sum3 = 0.0; 8306cd98798SBarry Smith sum4 = 0.0; 8316cd98798SBarry Smith sum5 = 0.0; 8326cd98798SBarry Smith sum6 = 0.0; 833b3c51c66SMatthew Knepley nonzerorow += (n>0); 8346cd98798SBarry Smith for (j=0; j<n; j++) { 8356cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 8366cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 8376cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 8386cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 8396cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 8406cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 8416cd98798SBarry Smith jrow++; 8426cd98798SBarry Smith } 8436cd98798SBarry Smith y[6*i] = sum1; 8446cd98798SBarry Smith y[6*i+1] = sum2; 8456cd98798SBarry Smith y[6*i+2] = sum3; 8466cd98798SBarry Smith y[6*i+3] = sum4; 8476cd98798SBarry Smith y[6*i+4] = sum5; 8486cd98798SBarry Smith y[6*i+5] = sum6; 8496cd98798SBarry Smith } 8506cd98798SBarry Smith 851b3c51c66SMatthew Knepley ierr = PetscLogFlops(12*a->nz - 6*nonzerorow);CHKERRQ(ierr); 8521ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 8531ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 8546cd98798SBarry Smith PetscFunctionReturn(0); 8556cd98798SBarry Smith } 8566cd98798SBarry Smith 8574a2ae208SSatish Balay #undef __FUNCT__ 858b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_6" 859dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 8606cd98798SBarry Smith { 8616cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8626cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 86387828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,zero = 0.0; 864dfbe8321SBarry Smith PetscErrorCode ierr; 865899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 8666cd98798SBarry Smith 8676cd98798SBarry Smith PetscFunctionBegin; 8682dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 8691ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8701ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 871bfec09a0SHong Zhang 8726cd98798SBarry Smith for (i=0; i<m; i++) { 873bfec09a0SHong Zhang idx = a->j + a->i[i] ; 874bfec09a0SHong Zhang v = a->a + a->i[i] ; 8756cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 8766cd98798SBarry Smith alpha1 = x[6*i]; 8776cd98798SBarry Smith alpha2 = x[6*i+1]; 8786cd98798SBarry Smith alpha3 = x[6*i+2]; 8796cd98798SBarry Smith alpha4 = x[6*i+3]; 8806cd98798SBarry Smith alpha5 = x[6*i+4]; 8816cd98798SBarry Smith alpha6 = x[6*i+5]; 8826cd98798SBarry Smith while (n-->0) { 8836cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 8846cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 8856cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 8866cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 8876cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 8886cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 8896cd98798SBarry Smith idx++; v++; 8906cd98798SBarry Smith } 8916cd98798SBarry Smith } 892b3c51c66SMatthew Knepley ierr = PetscLogFlops(12*a->nz);CHKERRQ(ierr); 8931ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 8941ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 8956cd98798SBarry Smith PetscFunctionReturn(0); 8966cd98798SBarry Smith } 8976cd98798SBarry Smith 8984a2ae208SSatish Balay #undef __FUNCT__ 899b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_6" 900dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 9016cd98798SBarry Smith { 9026cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9036cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 90487828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6; 905dfbe8321SBarry Smith PetscErrorCode ierr; 906899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 907b24ad042SBarry Smith PetscInt n,i,jrow,j; 9086cd98798SBarry Smith 9096cd98798SBarry Smith PetscFunctionBegin; 9106cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 9111ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 9121ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 9136cd98798SBarry Smith idx = a->j; 9146cd98798SBarry Smith v = a->a; 9156cd98798SBarry Smith ii = a->i; 9166cd98798SBarry Smith 9176cd98798SBarry Smith for (i=0; i<m; i++) { 9186cd98798SBarry Smith jrow = ii[i]; 9196cd98798SBarry Smith n = ii[i+1] - jrow; 9206cd98798SBarry Smith sum1 = 0.0; 9216cd98798SBarry Smith sum2 = 0.0; 9226cd98798SBarry Smith sum3 = 0.0; 9236cd98798SBarry Smith sum4 = 0.0; 9246cd98798SBarry Smith sum5 = 0.0; 9256cd98798SBarry Smith sum6 = 0.0; 9266cd98798SBarry Smith for (j=0; j<n; j++) { 9276cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 9286cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 9296cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 9306cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 9316cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 9326cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 9336cd98798SBarry Smith jrow++; 9346cd98798SBarry Smith } 9356cd98798SBarry Smith y[6*i] += sum1; 9366cd98798SBarry Smith y[6*i+1] += sum2; 9376cd98798SBarry Smith y[6*i+2] += sum3; 9386cd98798SBarry Smith y[6*i+3] += sum4; 9396cd98798SBarry Smith y[6*i+4] += sum5; 9406cd98798SBarry Smith y[6*i+5] += sum6; 9416cd98798SBarry Smith } 9426cd98798SBarry Smith 943efee365bSSatish Balay ierr = PetscLogFlops(12*a->nz);CHKERRQ(ierr); 9441ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 9451ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 9466cd98798SBarry Smith PetscFunctionReturn(0); 9476cd98798SBarry Smith } 9486cd98798SBarry Smith 9494a2ae208SSatish Balay #undef __FUNCT__ 950b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_6" 951dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 9526cd98798SBarry Smith { 9536cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9546cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 95587828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6; 956dfbe8321SBarry Smith PetscErrorCode ierr; 957899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 9586cd98798SBarry Smith 9596cd98798SBarry Smith PetscFunctionBegin; 9606cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 9611ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 9621ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 963bfec09a0SHong Zhang 9646cd98798SBarry Smith for (i=0; i<m; i++) { 965bfec09a0SHong Zhang idx = a->j + a->i[i] ; 966bfec09a0SHong Zhang v = a->a + a->i[i] ; 9676cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 9686cd98798SBarry Smith alpha1 = x[6*i]; 9696cd98798SBarry Smith alpha2 = x[6*i+1]; 9706cd98798SBarry Smith alpha3 = x[6*i+2]; 9716cd98798SBarry Smith alpha4 = x[6*i+3]; 9726cd98798SBarry Smith alpha5 = x[6*i+4]; 9736cd98798SBarry Smith alpha6 = x[6*i+5]; 9746cd98798SBarry Smith while (n-->0) { 9756cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 9766cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 9776cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 9786cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 9796cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 9806cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 9816cd98798SBarry Smith idx++; v++; 9826cd98798SBarry Smith } 9836cd98798SBarry Smith } 984efee365bSSatish Balay ierr = PetscLogFlops(12*a->nz);CHKERRQ(ierr); 9851ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 9861ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 9876cd98798SBarry Smith PetscFunctionReturn(0); 9886cd98798SBarry Smith } 9896cd98798SBarry Smith 99066ed3db0SBarry Smith /* ------------------------------------------------------------------------------*/ 99166ed3db0SBarry Smith #undef __FUNCT__ 992ed8eea03SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_7" 993ed8eea03SBarry Smith PetscErrorCode MatMult_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 994ed8eea03SBarry Smith { 995ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 996ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 997ed8eea03SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 998ed8eea03SBarry Smith PetscErrorCode ierr; 999b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 1000ed8eea03SBarry Smith PetscInt n,i,jrow,j; 1001ed8eea03SBarry Smith 1002ed8eea03SBarry Smith PetscFunctionBegin; 1003ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1004ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1005ed8eea03SBarry Smith idx = a->j; 1006ed8eea03SBarry Smith v = a->a; 1007ed8eea03SBarry Smith ii = a->i; 1008ed8eea03SBarry Smith 1009ed8eea03SBarry Smith for (i=0; i<m; i++) { 1010ed8eea03SBarry Smith jrow = ii[i]; 1011ed8eea03SBarry Smith n = ii[i+1] - jrow; 1012ed8eea03SBarry Smith sum1 = 0.0; 1013ed8eea03SBarry Smith sum2 = 0.0; 1014ed8eea03SBarry Smith sum3 = 0.0; 1015ed8eea03SBarry Smith sum4 = 0.0; 1016ed8eea03SBarry Smith sum5 = 0.0; 1017ed8eea03SBarry Smith sum6 = 0.0; 1018ed8eea03SBarry Smith sum7 = 0.0; 1019b3c51c66SMatthew Knepley nonzerorow += (n>0); 1020ed8eea03SBarry Smith for (j=0; j<n; j++) { 1021ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1022ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1023ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1024ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1025ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1026ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1027ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1028ed8eea03SBarry Smith jrow++; 1029ed8eea03SBarry Smith } 1030ed8eea03SBarry Smith y[7*i] = sum1; 1031ed8eea03SBarry Smith y[7*i+1] = sum2; 1032ed8eea03SBarry Smith y[7*i+2] = sum3; 1033ed8eea03SBarry Smith y[7*i+3] = sum4; 1034ed8eea03SBarry Smith y[7*i+4] = sum5; 1035ed8eea03SBarry Smith y[7*i+5] = sum6; 1036ed8eea03SBarry Smith y[7*i+6] = sum7; 1037ed8eea03SBarry Smith } 1038ed8eea03SBarry Smith 1039b3c51c66SMatthew Knepley ierr = PetscLogFlops(14*a->nz - 7*nonzerorow);CHKERRQ(ierr); 1040ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1041ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1042ed8eea03SBarry Smith PetscFunctionReturn(0); 1043ed8eea03SBarry Smith } 1044ed8eea03SBarry Smith 1045ed8eea03SBarry Smith #undef __FUNCT__ 1046ed8eea03SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_7" 1047ed8eea03SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 1048ed8eea03SBarry Smith { 1049ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1050ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1051ed8eea03SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,zero = 0.0; 1052ed8eea03SBarry Smith PetscErrorCode ierr; 1053899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 1054ed8eea03SBarry Smith 1055ed8eea03SBarry Smith PetscFunctionBegin; 10562dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 1057ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1058ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1059ed8eea03SBarry Smith 1060ed8eea03SBarry Smith for (i=0; i<m; i++) { 1061ed8eea03SBarry Smith idx = a->j + a->i[i] ; 1062ed8eea03SBarry Smith v = a->a + a->i[i] ; 1063ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1064ed8eea03SBarry Smith alpha1 = x[7*i]; 1065ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1066ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1067ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1068ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1069ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1070ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1071ed8eea03SBarry Smith while (n-->0) { 1072ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1073ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1074ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1075ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1076ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1077ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1078ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1079ed8eea03SBarry Smith idx++; v++; 1080ed8eea03SBarry Smith } 1081ed8eea03SBarry Smith } 1082b3c51c66SMatthew Knepley ierr = PetscLogFlops(14*a->nz);CHKERRQ(ierr); 1083ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1084ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1085ed8eea03SBarry Smith PetscFunctionReturn(0); 1086ed8eea03SBarry Smith } 1087ed8eea03SBarry Smith 1088ed8eea03SBarry Smith #undef __FUNCT__ 1089ed8eea03SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_7" 1090ed8eea03SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1091ed8eea03SBarry Smith { 1092ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1093ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1094ed8eea03SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 1095ed8eea03SBarry Smith PetscErrorCode ierr; 1096899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 1097ed8eea03SBarry Smith PetscInt n,i,jrow,j; 1098ed8eea03SBarry Smith 1099ed8eea03SBarry Smith PetscFunctionBegin; 1100ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 1101ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1102ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1103ed8eea03SBarry Smith idx = a->j; 1104ed8eea03SBarry Smith v = a->a; 1105ed8eea03SBarry Smith ii = a->i; 1106ed8eea03SBarry Smith 1107ed8eea03SBarry Smith for (i=0; i<m; i++) { 1108ed8eea03SBarry Smith jrow = ii[i]; 1109ed8eea03SBarry Smith n = ii[i+1] - jrow; 1110ed8eea03SBarry Smith sum1 = 0.0; 1111ed8eea03SBarry Smith sum2 = 0.0; 1112ed8eea03SBarry Smith sum3 = 0.0; 1113ed8eea03SBarry Smith sum4 = 0.0; 1114ed8eea03SBarry Smith sum5 = 0.0; 1115ed8eea03SBarry Smith sum6 = 0.0; 1116ed8eea03SBarry Smith sum7 = 0.0; 1117ed8eea03SBarry Smith for (j=0; j<n; j++) { 1118ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1119ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1120ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1121ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1122ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1123ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1124ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1125ed8eea03SBarry Smith jrow++; 1126ed8eea03SBarry Smith } 1127ed8eea03SBarry Smith y[7*i] += sum1; 1128ed8eea03SBarry Smith y[7*i+1] += sum2; 1129ed8eea03SBarry Smith y[7*i+2] += sum3; 1130ed8eea03SBarry Smith y[7*i+3] += sum4; 1131ed8eea03SBarry Smith y[7*i+4] += sum5; 1132ed8eea03SBarry Smith y[7*i+5] += sum6; 1133ed8eea03SBarry Smith y[7*i+6] += sum7; 1134ed8eea03SBarry Smith } 1135ed8eea03SBarry Smith 1136efee365bSSatish Balay ierr = PetscLogFlops(14*a->nz);CHKERRQ(ierr); 1137ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1138ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1139ed8eea03SBarry Smith PetscFunctionReturn(0); 1140ed8eea03SBarry Smith } 1141ed8eea03SBarry Smith 1142ed8eea03SBarry Smith #undef __FUNCT__ 1143ed8eea03SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_7" 1144ed8eea03SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1145ed8eea03SBarry Smith { 1146ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1147ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1148ed8eea03SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7; 1149ed8eea03SBarry Smith PetscErrorCode ierr; 1150899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 1151ed8eea03SBarry Smith 1152ed8eea03SBarry Smith PetscFunctionBegin; 1153ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 1154ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1155ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1156ed8eea03SBarry Smith for (i=0; i<m; i++) { 1157ed8eea03SBarry Smith idx = a->j + a->i[i] ; 1158ed8eea03SBarry Smith v = a->a + a->i[i] ; 1159ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1160ed8eea03SBarry Smith alpha1 = x[7*i]; 1161ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1162ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1163ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1164ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1165ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1166ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1167ed8eea03SBarry Smith while (n-->0) { 1168ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1169ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1170ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1171ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1172ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1173ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1174ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1175ed8eea03SBarry Smith idx++; v++; 1176ed8eea03SBarry Smith } 1177ed8eea03SBarry Smith } 1178efee365bSSatish Balay ierr = PetscLogFlops(14*a->nz);CHKERRQ(ierr); 1179ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1180ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1181ed8eea03SBarry Smith PetscFunctionReturn(0); 1182ed8eea03SBarry Smith } 1183ed8eea03SBarry Smith 1184ed8eea03SBarry Smith #undef __FUNCT__ 118566ed3db0SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_8" 1186dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 118766ed3db0SBarry Smith { 118866ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 118966ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 119087828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1191dfbe8321SBarry Smith PetscErrorCode ierr; 1192b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 1193b24ad042SBarry Smith PetscInt n,i,jrow,j; 119466ed3db0SBarry Smith 119566ed3db0SBarry Smith PetscFunctionBegin; 11961ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 11971ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 119866ed3db0SBarry Smith idx = a->j; 119966ed3db0SBarry Smith v = a->a; 120066ed3db0SBarry Smith ii = a->i; 120166ed3db0SBarry Smith 120266ed3db0SBarry Smith for (i=0; i<m; i++) { 120366ed3db0SBarry Smith jrow = ii[i]; 120466ed3db0SBarry Smith n = ii[i+1] - jrow; 120566ed3db0SBarry Smith sum1 = 0.0; 120666ed3db0SBarry Smith sum2 = 0.0; 120766ed3db0SBarry Smith sum3 = 0.0; 120866ed3db0SBarry Smith sum4 = 0.0; 120966ed3db0SBarry Smith sum5 = 0.0; 121066ed3db0SBarry Smith sum6 = 0.0; 121166ed3db0SBarry Smith sum7 = 0.0; 121266ed3db0SBarry Smith sum8 = 0.0; 1213b3c51c66SMatthew Knepley nonzerorow += (n>0); 121466ed3db0SBarry Smith for (j=0; j<n; j++) { 121566ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 121666ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 121766ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 121866ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 121966ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 122066ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 122166ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 122266ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 122366ed3db0SBarry Smith jrow++; 122466ed3db0SBarry Smith } 122566ed3db0SBarry Smith y[8*i] = sum1; 122666ed3db0SBarry Smith y[8*i+1] = sum2; 122766ed3db0SBarry Smith y[8*i+2] = sum3; 122866ed3db0SBarry Smith y[8*i+3] = sum4; 122966ed3db0SBarry Smith y[8*i+4] = sum5; 123066ed3db0SBarry Smith y[8*i+5] = sum6; 123166ed3db0SBarry Smith y[8*i+6] = sum7; 123266ed3db0SBarry Smith y[8*i+7] = sum8; 123366ed3db0SBarry Smith } 123466ed3db0SBarry Smith 1235b3c51c66SMatthew Knepley ierr = PetscLogFlops(16*a->nz - 8*nonzerorow);CHKERRQ(ierr); 12361ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 12371ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 123866ed3db0SBarry Smith PetscFunctionReturn(0); 123966ed3db0SBarry Smith } 124066ed3db0SBarry Smith 124166ed3db0SBarry Smith #undef __FUNCT__ 124266ed3db0SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_8" 1243dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 124466ed3db0SBarry Smith { 124566ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 124666ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 124787828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,zero = 0.0; 1248dfbe8321SBarry Smith PetscErrorCode ierr; 1249899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 125066ed3db0SBarry Smith 125166ed3db0SBarry Smith PetscFunctionBegin; 12522dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 12531ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 12541ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1255bfec09a0SHong Zhang 125666ed3db0SBarry Smith for (i=0; i<m; i++) { 1257bfec09a0SHong Zhang idx = a->j + a->i[i] ; 1258bfec09a0SHong Zhang v = a->a + a->i[i] ; 125966ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 126066ed3db0SBarry Smith alpha1 = x[8*i]; 126166ed3db0SBarry Smith alpha2 = x[8*i+1]; 126266ed3db0SBarry Smith alpha3 = x[8*i+2]; 126366ed3db0SBarry Smith alpha4 = x[8*i+3]; 126466ed3db0SBarry Smith alpha5 = x[8*i+4]; 126566ed3db0SBarry Smith alpha6 = x[8*i+5]; 126666ed3db0SBarry Smith alpha7 = x[8*i+6]; 126766ed3db0SBarry Smith alpha8 = x[8*i+7]; 126866ed3db0SBarry Smith while (n-->0) { 126966ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 127066ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 127166ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 127266ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 127366ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 127466ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 127566ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 127666ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 127766ed3db0SBarry Smith idx++; v++; 127866ed3db0SBarry Smith } 127966ed3db0SBarry Smith } 1280b3c51c66SMatthew Knepley ierr = PetscLogFlops(16*a->nz);CHKERRQ(ierr); 12811ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 12821ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 128366ed3db0SBarry Smith PetscFunctionReturn(0); 128466ed3db0SBarry Smith } 128566ed3db0SBarry Smith 128666ed3db0SBarry Smith #undef __FUNCT__ 128766ed3db0SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_8" 1288dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 128966ed3db0SBarry Smith { 129066ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 129166ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 129287828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1293dfbe8321SBarry Smith PetscErrorCode ierr; 1294899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 1295b24ad042SBarry Smith PetscInt n,i,jrow,j; 129666ed3db0SBarry Smith 129766ed3db0SBarry Smith PetscFunctionBegin; 129866ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 12991ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 13001ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 130166ed3db0SBarry Smith idx = a->j; 130266ed3db0SBarry Smith v = a->a; 130366ed3db0SBarry Smith ii = a->i; 130466ed3db0SBarry Smith 130566ed3db0SBarry Smith for (i=0; i<m; i++) { 130666ed3db0SBarry Smith jrow = ii[i]; 130766ed3db0SBarry Smith n = ii[i+1] - jrow; 130866ed3db0SBarry Smith sum1 = 0.0; 130966ed3db0SBarry Smith sum2 = 0.0; 131066ed3db0SBarry Smith sum3 = 0.0; 131166ed3db0SBarry Smith sum4 = 0.0; 131266ed3db0SBarry Smith sum5 = 0.0; 131366ed3db0SBarry Smith sum6 = 0.0; 131466ed3db0SBarry Smith sum7 = 0.0; 131566ed3db0SBarry Smith sum8 = 0.0; 131666ed3db0SBarry Smith for (j=0; j<n; j++) { 131766ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 131866ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 131966ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 132066ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 132166ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 132266ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 132366ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 132466ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 132566ed3db0SBarry Smith jrow++; 132666ed3db0SBarry Smith } 132766ed3db0SBarry Smith y[8*i] += sum1; 132866ed3db0SBarry Smith y[8*i+1] += sum2; 132966ed3db0SBarry Smith y[8*i+2] += sum3; 133066ed3db0SBarry Smith y[8*i+3] += sum4; 133166ed3db0SBarry Smith y[8*i+4] += sum5; 133266ed3db0SBarry Smith y[8*i+5] += sum6; 133366ed3db0SBarry Smith y[8*i+6] += sum7; 133466ed3db0SBarry Smith y[8*i+7] += sum8; 133566ed3db0SBarry Smith } 133666ed3db0SBarry Smith 1337efee365bSSatish Balay ierr = PetscLogFlops(16*a->nz);CHKERRQ(ierr); 13381ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 13391ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 134066ed3db0SBarry Smith PetscFunctionReturn(0); 134166ed3db0SBarry Smith } 134266ed3db0SBarry Smith 134366ed3db0SBarry Smith #undef __FUNCT__ 134466ed3db0SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_8" 1345dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 134666ed3db0SBarry Smith { 134766ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 134866ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 134987828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 1350dfbe8321SBarry Smith PetscErrorCode ierr; 1351899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 135266ed3db0SBarry Smith 135366ed3db0SBarry Smith PetscFunctionBegin; 135466ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 13551ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 13561ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 135766ed3db0SBarry Smith for (i=0; i<m; i++) { 1358bfec09a0SHong Zhang idx = a->j + a->i[i] ; 1359bfec09a0SHong Zhang v = a->a + a->i[i] ; 136066ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 136166ed3db0SBarry Smith alpha1 = x[8*i]; 136266ed3db0SBarry Smith alpha2 = x[8*i+1]; 136366ed3db0SBarry Smith alpha3 = x[8*i+2]; 136466ed3db0SBarry Smith alpha4 = x[8*i+3]; 136566ed3db0SBarry Smith alpha5 = x[8*i+4]; 136666ed3db0SBarry Smith alpha6 = x[8*i+5]; 136766ed3db0SBarry Smith alpha7 = x[8*i+6]; 136866ed3db0SBarry Smith alpha8 = x[8*i+7]; 136966ed3db0SBarry Smith while (n-->0) { 137066ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 137166ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 137266ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 137366ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 137466ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 137566ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 137666ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 137766ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 137866ed3db0SBarry Smith idx++; v++; 137966ed3db0SBarry Smith } 138066ed3db0SBarry Smith } 1381efee365bSSatish Balay ierr = PetscLogFlops(16*a->nz);CHKERRQ(ierr); 13821ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 13831ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 13842f7816d4SBarry Smith PetscFunctionReturn(0); 13852f7816d4SBarry Smith } 13862f7816d4SBarry Smith 13872b692628SMatthew Knepley /* ------------------------------------------------------------------------------*/ 13882b692628SMatthew Knepley #undef __FUNCT__ 13892b692628SMatthew Knepley #define __FUNCT__ "MatMult_SeqMAIJ_9" 1390dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 13912b692628SMatthew Knepley { 13922b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 13932b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 13942b692628SMatthew Knepley PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1395dfbe8321SBarry Smith PetscErrorCode ierr; 1396b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 1397b24ad042SBarry Smith PetscInt n,i,jrow,j; 13982b692628SMatthew Knepley 13992b692628SMatthew Knepley PetscFunctionBegin; 14001ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 14011ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 14022b692628SMatthew Knepley idx = a->j; 14032b692628SMatthew Knepley v = a->a; 14042b692628SMatthew Knepley ii = a->i; 14052b692628SMatthew Knepley 14062b692628SMatthew Knepley for (i=0; i<m; i++) { 14072b692628SMatthew Knepley jrow = ii[i]; 14082b692628SMatthew Knepley n = ii[i+1] - jrow; 14092b692628SMatthew Knepley sum1 = 0.0; 14102b692628SMatthew Knepley sum2 = 0.0; 14112b692628SMatthew Knepley sum3 = 0.0; 14122b692628SMatthew Knepley sum4 = 0.0; 14132b692628SMatthew Knepley sum5 = 0.0; 14142b692628SMatthew Knepley sum6 = 0.0; 14152b692628SMatthew Knepley sum7 = 0.0; 14162b692628SMatthew Knepley sum8 = 0.0; 14172b692628SMatthew Knepley sum9 = 0.0; 1418b3c51c66SMatthew Knepley nonzerorow += (n>0); 14192b692628SMatthew Knepley for (j=0; j<n; j++) { 14202b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 14212b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 14222b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 14232b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 14242b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 14252b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 14262b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 14272b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 14282b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 14292b692628SMatthew Knepley jrow++; 14302b692628SMatthew Knepley } 14312b692628SMatthew Knepley y[9*i] = sum1; 14322b692628SMatthew Knepley y[9*i+1] = sum2; 14332b692628SMatthew Knepley y[9*i+2] = sum3; 14342b692628SMatthew Knepley y[9*i+3] = sum4; 14352b692628SMatthew Knepley y[9*i+4] = sum5; 14362b692628SMatthew Knepley y[9*i+5] = sum6; 14372b692628SMatthew Knepley y[9*i+6] = sum7; 14382b692628SMatthew Knepley y[9*i+7] = sum8; 14392b692628SMatthew Knepley y[9*i+8] = sum9; 14402b692628SMatthew Knepley } 14412b692628SMatthew Knepley 1442b3c51c66SMatthew Knepley ierr = PetscLogFlops(18*a->nz - 9*nonzerorow);CHKERRQ(ierr); 14431ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 14441ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 14452b692628SMatthew Knepley PetscFunctionReturn(0); 14462b692628SMatthew Knepley } 14472b692628SMatthew Knepley 1448b9cda22cSBarry Smith /* ------------------------------------------------------------------------------*/ 1449b9cda22cSBarry Smith 14502b692628SMatthew Knepley #undef __FUNCT__ 14512b692628SMatthew Knepley #define __FUNCT__ "MatMultTranspose_SeqMAIJ_9" 1452dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 14532b692628SMatthew Knepley { 14542b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 14552b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 14562b692628SMatthew Knepley PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,zero = 0.0; 1457dfbe8321SBarry Smith PetscErrorCode ierr; 1458899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 14592b692628SMatthew Knepley 14602b692628SMatthew Knepley PetscFunctionBegin; 14612dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 14621ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 14631ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 14642b692628SMatthew Knepley 14652b692628SMatthew Knepley for (i=0; i<m; i++) { 14662b692628SMatthew Knepley idx = a->j + a->i[i] ; 14672b692628SMatthew Knepley v = a->a + a->i[i] ; 14682b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 14692b692628SMatthew Knepley alpha1 = x[9*i]; 14702b692628SMatthew Knepley alpha2 = x[9*i+1]; 14712b692628SMatthew Knepley alpha3 = x[9*i+2]; 14722b692628SMatthew Knepley alpha4 = x[9*i+3]; 14732b692628SMatthew Knepley alpha5 = x[9*i+4]; 14742b692628SMatthew Knepley alpha6 = x[9*i+5]; 14752b692628SMatthew Knepley alpha7 = x[9*i+6]; 14762b692628SMatthew Knepley alpha8 = x[9*i+7]; 14772f6bd0c6SMatthew Knepley alpha9 = x[9*i+8]; 14782b692628SMatthew Knepley while (n-->0) { 14792b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 14802b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 14812b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 14822b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 14832b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 14842b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 14852b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 14862b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 14872b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 14882b692628SMatthew Knepley idx++; v++; 14892b692628SMatthew Knepley } 14902b692628SMatthew Knepley } 1491b3c51c66SMatthew Knepley ierr = PetscLogFlops(18*a->nz);CHKERRQ(ierr); 14921ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 14931ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 14942b692628SMatthew Knepley PetscFunctionReturn(0); 14952b692628SMatthew Knepley } 14962b692628SMatthew Knepley 14972b692628SMatthew Knepley #undef __FUNCT__ 14982b692628SMatthew Knepley #define __FUNCT__ "MatMultAdd_SeqMAIJ_9" 1499dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 15002b692628SMatthew Knepley { 15012b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15022b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 15032b692628SMatthew Knepley PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1504dfbe8321SBarry Smith PetscErrorCode ierr; 1505899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 1506b24ad042SBarry Smith PetscInt n,i,jrow,j; 15072b692628SMatthew Knepley 15082b692628SMatthew Knepley PetscFunctionBegin; 15092b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 15101ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 15111ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 15122b692628SMatthew Knepley idx = a->j; 15132b692628SMatthew Knepley v = a->a; 15142b692628SMatthew Knepley ii = a->i; 15152b692628SMatthew Knepley 15162b692628SMatthew Knepley for (i=0; i<m; i++) { 15172b692628SMatthew Knepley jrow = ii[i]; 15182b692628SMatthew Knepley n = ii[i+1] - jrow; 15192b692628SMatthew Knepley sum1 = 0.0; 15202b692628SMatthew Knepley sum2 = 0.0; 15212b692628SMatthew Knepley sum3 = 0.0; 15222b692628SMatthew Knepley sum4 = 0.0; 15232b692628SMatthew Knepley sum5 = 0.0; 15242b692628SMatthew Knepley sum6 = 0.0; 15252b692628SMatthew Knepley sum7 = 0.0; 15262b692628SMatthew Knepley sum8 = 0.0; 15272b692628SMatthew Knepley sum9 = 0.0; 15282b692628SMatthew Knepley for (j=0; j<n; j++) { 15292b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 15302b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 15312b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 15322b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 15332b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 15342b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 15352b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 15362b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 15372b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 15382b692628SMatthew Knepley jrow++; 15392b692628SMatthew Knepley } 15402b692628SMatthew Knepley y[9*i] += sum1; 15412b692628SMatthew Knepley y[9*i+1] += sum2; 15422b692628SMatthew Knepley y[9*i+2] += sum3; 15432b692628SMatthew Knepley y[9*i+3] += sum4; 15442b692628SMatthew Knepley y[9*i+4] += sum5; 15452b692628SMatthew Knepley y[9*i+5] += sum6; 15462b692628SMatthew Knepley y[9*i+6] += sum7; 15472b692628SMatthew Knepley y[9*i+7] += sum8; 15482b692628SMatthew Knepley y[9*i+8] += sum9; 15492b692628SMatthew Knepley } 15502b692628SMatthew Knepley 1551efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz);CHKERRQ(ierr); 15521ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 15531ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 15542b692628SMatthew Knepley PetscFunctionReturn(0); 15552b692628SMatthew Knepley } 15562b692628SMatthew Knepley 15572b692628SMatthew Knepley #undef __FUNCT__ 15582b692628SMatthew Knepley #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_9" 1559dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 15602b692628SMatthew Knepley { 15612b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15622b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 15632b692628SMatthew Knepley PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9; 1564dfbe8321SBarry Smith PetscErrorCode ierr; 1565899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 15662b692628SMatthew Knepley 15672b692628SMatthew Knepley PetscFunctionBegin; 15682b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 15691ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 15701ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 15712b692628SMatthew Knepley for (i=0; i<m; i++) { 15722b692628SMatthew Knepley idx = a->j + a->i[i] ; 15732b692628SMatthew Knepley v = a->a + a->i[i] ; 15742b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 15752b692628SMatthew Knepley alpha1 = x[9*i]; 15762b692628SMatthew Knepley alpha2 = x[9*i+1]; 15772b692628SMatthew Knepley alpha3 = x[9*i+2]; 15782b692628SMatthew Knepley alpha4 = x[9*i+3]; 15792b692628SMatthew Knepley alpha5 = x[9*i+4]; 15802b692628SMatthew Knepley alpha6 = x[9*i+5]; 15812b692628SMatthew Knepley alpha7 = x[9*i+6]; 15822b692628SMatthew Knepley alpha8 = x[9*i+7]; 15832b692628SMatthew Knepley alpha9 = x[9*i+8]; 15842b692628SMatthew Knepley while (n-->0) { 15852b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 15862b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 15872b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 15882b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 15892b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 15902b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 15912b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 15922b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 15932b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 15942b692628SMatthew Knepley idx++; v++; 15952b692628SMatthew Knepley } 15962b692628SMatthew Knepley } 1597efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz);CHKERRQ(ierr); 15981ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 15991ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 16002b692628SMatthew Knepley PetscFunctionReturn(0); 16012b692628SMatthew Knepley } 1602b9cda22cSBarry Smith /*--------------------------------------------------------------------------------------------*/ 1603b9cda22cSBarry Smith #undef __FUNCT__ 1604b9cda22cSBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_10" 1605b9cda22cSBarry Smith PetscErrorCode MatMult_SeqMAIJ_10(Mat A,Vec xx,Vec yy) 1606b9cda22cSBarry Smith { 1607b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1608b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1609b9cda22cSBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10; 1610b9cda22cSBarry Smith PetscErrorCode ierr; 1611b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 1612b9cda22cSBarry Smith PetscInt n,i,jrow,j; 1613b9cda22cSBarry Smith 1614b9cda22cSBarry Smith PetscFunctionBegin; 1615b9cda22cSBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1616b9cda22cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1617b9cda22cSBarry Smith idx = a->j; 1618b9cda22cSBarry Smith v = a->a; 1619b9cda22cSBarry Smith ii = a->i; 1620b9cda22cSBarry Smith 1621b9cda22cSBarry Smith for (i=0; i<m; i++) { 1622b9cda22cSBarry Smith jrow = ii[i]; 1623b9cda22cSBarry Smith n = ii[i+1] - jrow; 1624b9cda22cSBarry Smith sum1 = 0.0; 1625b9cda22cSBarry Smith sum2 = 0.0; 1626b9cda22cSBarry Smith sum3 = 0.0; 1627b9cda22cSBarry Smith sum4 = 0.0; 1628b9cda22cSBarry Smith sum5 = 0.0; 1629b9cda22cSBarry Smith sum6 = 0.0; 1630b9cda22cSBarry Smith sum7 = 0.0; 1631b9cda22cSBarry Smith sum8 = 0.0; 1632b9cda22cSBarry Smith sum9 = 0.0; 1633b9cda22cSBarry Smith sum10 = 0.0; 1634b3c51c66SMatthew Knepley nonzerorow += (n>0); 1635b9cda22cSBarry Smith for (j=0; j<n; j++) { 1636b9cda22cSBarry Smith sum1 += v[jrow]*x[10*idx[jrow]]; 1637b9cda22cSBarry Smith sum2 += v[jrow]*x[10*idx[jrow]+1]; 1638b9cda22cSBarry Smith sum3 += v[jrow]*x[10*idx[jrow]+2]; 1639b9cda22cSBarry Smith sum4 += v[jrow]*x[10*idx[jrow]+3]; 1640b9cda22cSBarry Smith sum5 += v[jrow]*x[10*idx[jrow]+4]; 1641b9cda22cSBarry Smith sum6 += v[jrow]*x[10*idx[jrow]+5]; 1642b9cda22cSBarry Smith sum7 += v[jrow]*x[10*idx[jrow]+6]; 1643b9cda22cSBarry Smith sum8 += v[jrow]*x[10*idx[jrow]+7]; 1644b9cda22cSBarry Smith sum9 += v[jrow]*x[10*idx[jrow]+8]; 1645b9cda22cSBarry Smith sum10 += v[jrow]*x[10*idx[jrow]+9]; 1646b9cda22cSBarry Smith jrow++; 1647b9cda22cSBarry Smith } 1648b9cda22cSBarry Smith y[10*i] = sum1; 1649b9cda22cSBarry Smith y[10*i+1] = sum2; 1650b9cda22cSBarry Smith y[10*i+2] = sum3; 1651b9cda22cSBarry Smith y[10*i+3] = sum4; 1652b9cda22cSBarry Smith y[10*i+4] = sum5; 1653b9cda22cSBarry Smith y[10*i+5] = sum6; 1654b9cda22cSBarry Smith y[10*i+6] = sum7; 1655b9cda22cSBarry Smith y[10*i+7] = sum8; 1656b9cda22cSBarry Smith y[10*i+8] = sum9; 1657b9cda22cSBarry Smith y[10*i+9] = sum10; 1658b9cda22cSBarry Smith } 1659b9cda22cSBarry Smith 1660b3c51c66SMatthew Knepley ierr = PetscLogFlops(20*a->nz - 10*nonzerorow);CHKERRQ(ierr); 1661b9cda22cSBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1662b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1663b9cda22cSBarry Smith PetscFunctionReturn(0); 1664b9cda22cSBarry Smith } 1665b9cda22cSBarry Smith 1666b9cda22cSBarry Smith #undef __FUNCT__ 1667b9cda22cSBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_10" 1668b9cda22cSBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_10(Mat A,Vec xx,Vec yy,Vec zz) 1669b9cda22cSBarry Smith { 1670b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1671b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1672b9cda22cSBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10; 1673b9cda22cSBarry Smith PetscErrorCode ierr; 1674899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 1675b9cda22cSBarry Smith PetscInt n,i,jrow,j; 1676b9cda22cSBarry Smith 1677b9cda22cSBarry Smith PetscFunctionBegin; 1678b9cda22cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 1679b9cda22cSBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1680b9cda22cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1681b9cda22cSBarry Smith idx = a->j; 1682b9cda22cSBarry Smith v = a->a; 1683b9cda22cSBarry Smith ii = a->i; 1684b9cda22cSBarry Smith 1685b9cda22cSBarry Smith for (i=0; i<m; i++) { 1686b9cda22cSBarry Smith jrow = ii[i]; 1687b9cda22cSBarry Smith n = ii[i+1] - jrow; 1688b9cda22cSBarry Smith sum1 = 0.0; 1689b9cda22cSBarry Smith sum2 = 0.0; 1690b9cda22cSBarry Smith sum3 = 0.0; 1691b9cda22cSBarry Smith sum4 = 0.0; 1692b9cda22cSBarry Smith sum5 = 0.0; 1693b9cda22cSBarry Smith sum6 = 0.0; 1694b9cda22cSBarry Smith sum7 = 0.0; 1695b9cda22cSBarry Smith sum8 = 0.0; 1696b9cda22cSBarry Smith sum9 = 0.0; 1697b9cda22cSBarry Smith sum10 = 0.0; 1698b9cda22cSBarry Smith for (j=0; j<n; j++) { 1699b9cda22cSBarry Smith sum1 += v[jrow]*x[10*idx[jrow]]; 1700b9cda22cSBarry Smith sum2 += v[jrow]*x[10*idx[jrow]+1]; 1701b9cda22cSBarry Smith sum3 += v[jrow]*x[10*idx[jrow]+2]; 1702b9cda22cSBarry Smith sum4 += v[jrow]*x[10*idx[jrow]+3]; 1703b9cda22cSBarry Smith sum5 += v[jrow]*x[10*idx[jrow]+4]; 1704b9cda22cSBarry Smith sum6 += v[jrow]*x[10*idx[jrow]+5]; 1705b9cda22cSBarry Smith sum7 += v[jrow]*x[10*idx[jrow]+6]; 1706b9cda22cSBarry Smith sum8 += v[jrow]*x[10*idx[jrow]+7]; 1707b9cda22cSBarry Smith sum9 += v[jrow]*x[10*idx[jrow]+8]; 1708b9cda22cSBarry Smith sum10 += v[jrow]*x[10*idx[jrow]+9]; 1709b9cda22cSBarry Smith jrow++; 1710b9cda22cSBarry Smith } 1711b9cda22cSBarry Smith y[10*i] += sum1; 1712b9cda22cSBarry Smith y[10*i+1] += sum2; 1713b9cda22cSBarry Smith y[10*i+2] += sum3; 1714b9cda22cSBarry Smith y[10*i+3] += sum4; 1715b9cda22cSBarry Smith y[10*i+4] += sum5; 1716b9cda22cSBarry Smith y[10*i+5] += sum6; 1717b9cda22cSBarry Smith y[10*i+6] += sum7; 1718b9cda22cSBarry Smith y[10*i+7] += sum8; 1719b9cda22cSBarry Smith y[10*i+8] += sum9; 1720b9cda22cSBarry Smith y[10*i+9] += sum10; 1721b9cda22cSBarry Smith } 1722b9cda22cSBarry Smith 1723b3c51c66SMatthew Knepley ierr = PetscLogFlops(20*a->nz);CHKERRQ(ierr); 1724b9cda22cSBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1725b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1726b9cda22cSBarry Smith PetscFunctionReturn(0); 1727b9cda22cSBarry Smith } 1728b9cda22cSBarry Smith 1729b9cda22cSBarry Smith #undef __FUNCT__ 1730b9cda22cSBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_10" 1731b9cda22cSBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_10(Mat A,Vec xx,Vec yy) 1732b9cda22cSBarry Smith { 1733b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1734b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1735b9cda22cSBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10,zero = 0.0; 1736b9cda22cSBarry Smith PetscErrorCode ierr; 1737899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 1738b9cda22cSBarry Smith 1739b9cda22cSBarry Smith PetscFunctionBegin; 1740b9cda22cSBarry Smith ierr = VecSet(yy,zero);CHKERRQ(ierr); 1741b9cda22cSBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1742b9cda22cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1743b9cda22cSBarry Smith 1744b9cda22cSBarry Smith for (i=0; i<m; i++) { 1745b9cda22cSBarry Smith idx = a->j + a->i[i] ; 1746b9cda22cSBarry Smith v = a->a + a->i[i] ; 1747b9cda22cSBarry Smith n = a->i[i+1] - a->i[i]; 1748e29fdc22SBarry Smith alpha1 = x[10*i]; 1749e29fdc22SBarry Smith alpha2 = x[10*i+1]; 1750e29fdc22SBarry Smith alpha3 = x[10*i+2]; 1751e29fdc22SBarry Smith alpha4 = x[10*i+3]; 1752e29fdc22SBarry Smith alpha5 = x[10*i+4]; 1753e29fdc22SBarry Smith alpha6 = x[10*i+5]; 1754e29fdc22SBarry Smith alpha7 = x[10*i+6]; 1755e29fdc22SBarry Smith alpha8 = x[10*i+7]; 1756e29fdc22SBarry Smith alpha9 = x[10*i+8]; 1757b9cda22cSBarry Smith alpha10 = x[10*i+9]; 1758b9cda22cSBarry Smith while (n-->0) { 1759e29fdc22SBarry Smith y[10*(*idx)] += alpha1*(*v); 1760e29fdc22SBarry Smith y[10*(*idx)+1] += alpha2*(*v); 1761e29fdc22SBarry Smith y[10*(*idx)+2] += alpha3*(*v); 1762e29fdc22SBarry Smith y[10*(*idx)+3] += alpha4*(*v); 1763e29fdc22SBarry Smith y[10*(*idx)+4] += alpha5*(*v); 1764e29fdc22SBarry Smith y[10*(*idx)+5] += alpha6*(*v); 1765e29fdc22SBarry Smith y[10*(*idx)+6] += alpha7*(*v); 1766e29fdc22SBarry Smith y[10*(*idx)+7] += alpha8*(*v); 1767e29fdc22SBarry Smith y[10*(*idx)+8] += alpha9*(*v); 1768b9cda22cSBarry Smith y[10*(*idx)+9] += alpha10*(*v); 1769b9cda22cSBarry Smith idx++; v++; 1770b9cda22cSBarry Smith } 1771b9cda22cSBarry Smith } 1772b3c51c66SMatthew Knepley ierr = PetscLogFlops(20*a->nz);CHKERRQ(ierr); 1773b9cda22cSBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1774b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1775b9cda22cSBarry Smith PetscFunctionReturn(0); 1776b9cda22cSBarry Smith } 1777b9cda22cSBarry Smith 1778b9cda22cSBarry Smith #undef __FUNCT__ 1779b9cda22cSBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_10" 1780b9cda22cSBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_10(Mat A,Vec xx,Vec yy,Vec zz) 1781b9cda22cSBarry Smith { 1782b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1783b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1784b9cda22cSBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10; 1785b9cda22cSBarry Smith PetscErrorCode ierr; 1786899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 1787b9cda22cSBarry Smith 1788b9cda22cSBarry Smith PetscFunctionBegin; 1789b9cda22cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 1790b9cda22cSBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1791b9cda22cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1792b9cda22cSBarry Smith for (i=0; i<m; i++) { 1793b9cda22cSBarry Smith idx = a->j + a->i[i] ; 1794b9cda22cSBarry Smith v = a->a + a->i[i] ; 1795b9cda22cSBarry Smith n = a->i[i+1] - a->i[i]; 1796b9cda22cSBarry Smith alpha1 = x[10*i]; 1797b9cda22cSBarry Smith alpha2 = x[10*i+1]; 1798b9cda22cSBarry Smith alpha3 = x[10*i+2]; 1799b9cda22cSBarry Smith alpha4 = x[10*i+3]; 1800b9cda22cSBarry Smith alpha5 = x[10*i+4]; 1801b9cda22cSBarry Smith alpha6 = x[10*i+5]; 1802b9cda22cSBarry Smith alpha7 = x[10*i+6]; 1803b9cda22cSBarry Smith alpha8 = x[10*i+7]; 1804b9cda22cSBarry Smith alpha9 = x[10*i+8]; 1805b9cda22cSBarry Smith alpha10 = x[10*i+9]; 1806b9cda22cSBarry Smith while (n-->0) { 1807b9cda22cSBarry Smith y[10*(*idx)] += alpha1*(*v); 1808b9cda22cSBarry Smith y[10*(*idx)+1] += alpha2*(*v); 1809b9cda22cSBarry Smith y[10*(*idx)+2] += alpha3*(*v); 1810b9cda22cSBarry Smith y[10*(*idx)+3] += alpha4*(*v); 1811b9cda22cSBarry Smith y[10*(*idx)+4] += alpha5*(*v); 1812b9cda22cSBarry Smith y[10*(*idx)+5] += alpha6*(*v); 1813b9cda22cSBarry Smith y[10*(*idx)+6] += alpha7*(*v); 1814b9cda22cSBarry Smith y[10*(*idx)+7] += alpha8*(*v); 1815b9cda22cSBarry Smith y[10*(*idx)+8] += alpha9*(*v); 1816b9cda22cSBarry Smith y[10*(*idx)+9] += alpha10*(*v); 1817b9cda22cSBarry Smith idx++; v++; 1818b9cda22cSBarry Smith } 1819b9cda22cSBarry Smith } 1820b9cda22cSBarry Smith ierr = PetscLogFlops(20*a->nz);CHKERRQ(ierr); 1821b9cda22cSBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1822b9cda22cSBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1823b9cda22cSBarry Smith PetscFunctionReturn(0); 1824b9cda22cSBarry Smith } 1825b9cda22cSBarry Smith 18262b692628SMatthew Knepley 18272f7816d4SBarry Smith /*--------------------------------------------------------------------------------------------*/ 18282f7816d4SBarry Smith #undef __FUNCT__ 18292f7816d4SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_16" 1830dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 18312f7816d4SBarry Smith { 18322f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 18332f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 18342f7816d4SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 18352f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 1836dfbe8321SBarry Smith PetscErrorCode ierr; 1837b3c51c66SMatthew Knepley PetscInt m = b->AIJ->rmap.n,nonzerorow=0,*idx,*ii; 1838b24ad042SBarry Smith PetscInt n,i,jrow,j; 18392f7816d4SBarry Smith 18402f7816d4SBarry Smith PetscFunctionBegin; 18411ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 18421ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 18432f7816d4SBarry Smith idx = a->j; 18442f7816d4SBarry Smith v = a->a; 18452f7816d4SBarry Smith ii = a->i; 18462f7816d4SBarry Smith 18472f7816d4SBarry Smith for (i=0; i<m; i++) { 18482f7816d4SBarry Smith jrow = ii[i]; 18492f7816d4SBarry Smith n = ii[i+1] - jrow; 18502f7816d4SBarry Smith sum1 = 0.0; 18512f7816d4SBarry Smith sum2 = 0.0; 18522f7816d4SBarry Smith sum3 = 0.0; 18532f7816d4SBarry Smith sum4 = 0.0; 18542f7816d4SBarry Smith sum5 = 0.0; 18552f7816d4SBarry Smith sum6 = 0.0; 18562f7816d4SBarry Smith sum7 = 0.0; 18572f7816d4SBarry Smith sum8 = 0.0; 18582f7816d4SBarry Smith sum9 = 0.0; 18592f7816d4SBarry Smith sum10 = 0.0; 18602f7816d4SBarry Smith sum11 = 0.0; 18612f7816d4SBarry Smith sum12 = 0.0; 18622f7816d4SBarry Smith sum13 = 0.0; 18632f7816d4SBarry Smith sum14 = 0.0; 18642f7816d4SBarry Smith sum15 = 0.0; 18652f7816d4SBarry Smith sum16 = 0.0; 1866b3c51c66SMatthew Knepley nonzerorow += (n>0); 18672f7816d4SBarry Smith for (j=0; j<n; j++) { 18682f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 18692f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 18702f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 18712f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 18722f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 18732f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 18742f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 18752f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 18762f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 18772f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 18782f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 18792f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 18802f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 18812f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 18822f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 18832f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 18842f7816d4SBarry Smith jrow++; 18852f7816d4SBarry Smith } 18862f7816d4SBarry Smith y[16*i] = sum1; 18872f7816d4SBarry Smith y[16*i+1] = sum2; 18882f7816d4SBarry Smith y[16*i+2] = sum3; 18892f7816d4SBarry Smith y[16*i+3] = sum4; 18902f7816d4SBarry Smith y[16*i+4] = sum5; 18912f7816d4SBarry Smith y[16*i+5] = sum6; 18922f7816d4SBarry Smith y[16*i+6] = sum7; 18932f7816d4SBarry Smith y[16*i+7] = sum8; 18942f7816d4SBarry Smith y[16*i+8] = sum9; 18952f7816d4SBarry Smith y[16*i+9] = sum10; 18962f7816d4SBarry Smith y[16*i+10] = sum11; 18972f7816d4SBarry Smith y[16*i+11] = sum12; 18982f7816d4SBarry Smith y[16*i+12] = sum13; 18992f7816d4SBarry Smith y[16*i+13] = sum14; 19002f7816d4SBarry Smith y[16*i+14] = sum15; 19012f7816d4SBarry Smith y[16*i+15] = sum16; 19022f7816d4SBarry Smith } 19032f7816d4SBarry Smith 1904b3c51c66SMatthew Knepley ierr = PetscLogFlops(32*a->nz - 16*nonzerorow);CHKERRQ(ierr); 19051ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 19061ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 19072f7816d4SBarry Smith PetscFunctionReturn(0); 19082f7816d4SBarry Smith } 19092f7816d4SBarry Smith 19102f7816d4SBarry Smith #undef __FUNCT__ 19112f7816d4SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_16" 1912dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 19132f7816d4SBarry Smith { 19142f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 19152f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 19162f7816d4SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,zero = 0.0; 19172f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 1918dfbe8321SBarry Smith PetscErrorCode ierr; 1919899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 19202f7816d4SBarry Smith 19212f7816d4SBarry Smith PetscFunctionBegin; 19222dcb1b2aSMatthew Knepley ierr = VecSet(yy,zero);CHKERRQ(ierr); 19231ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 19241ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1925bfec09a0SHong Zhang 19262f7816d4SBarry Smith for (i=0; i<m; i++) { 1927bfec09a0SHong Zhang idx = a->j + a->i[i] ; 1928bfec09a0SHong Zhang v = a->a + a->i[i] ; 19292f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 19302f7816d4SBarry Smith alpha1 = x[16*i]; 19312f7816d4SBarry Smith alpha2 = x[16*i+1]; 19322f7816d4SBarry Smith alpha3 = x[16*i+2]; 19332f7816d4SBarry Smith alpha4 = x[16*i+3]; 19342f7816d4SBarry Smith alpha5 = x[16*i+4]; 19352f7816d4SBarry Smith alpha6 = x[16*i+5]; 19362f7816d4SBarry Smith alpha7 = x[16*i+6]; 19372f7816d4SBarry Smith alpha8 = x[16*i+7]; 19382f7816d4SBarry Smith alpha9 = x[16*i+8]; 19392f7816d4SBarry Smith alpha10 = x[16*i+9]; 19402f7816d4SBarry Smith alpha11 = x[16*i+10]; 19412f7816d4SBarry Smith alpha12 = x[16*i+11]; 19422f7816d4SBarry Smith alpha13 = x[16*i+12]; 19432f7816d4SBarry Smith alpha14 = x[16*i+13]; 19442f7816d4SBarry Smith alpha15 = x[16*i+14]; 19452f7816d4SBarry Smith alpha16 = x[16*i+15]; 19462f7816d4SBarry Smith while (n-->0) { 19472f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 19482f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 19492f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 19502f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 19512f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 19522f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 19532f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 19542f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 19552f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 19562f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 19572f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 19582f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 19592f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 19602f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 19612f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 19622f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 19632f7816d4SBarry Smith idx++; v++; 19642f7816d4SBarry Smith } 19652f7816d4SBarry Smith } 1966b3c51c66SMatthew Knepley ierr = PetscLogFlops(32*a->nz);CHKERRQ(ierr); 19671ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 19681ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 19692f7816d4SBarry Smith PetscFunctionReturn(0); 19702f7816d4SBarry Smith } 19712f7816d4SBarry Smith 19722f7816d4SBarry Smith #undef __FUNCT__ 19732f7816d4SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_16" 1974dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 19752f7816d4SBarry Smith { 19762f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 19772f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 19782f7816d4SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 19792f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 1980dfbe8321SBarry Smith PetscErrorCode ierr; 1981899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,*idx,*ii; 1982b24ad042SBarry Smith PetscInt n,i,jrow,j; 19832f7816d4SBarry Smith 19842f7816d4SBarry Smith PetscFunctionBegin; 19852f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 19861ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 19871ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 19882f7816d4SBarry Smith idx = a->j; 19892f7816d4SBarry Smith v = a->a; 19902f7816d4SBarry Smith ii = a->i; 19912f7816d4SBarry Smith 19922f7816d4SBarry Smith for (i=0; i<m; i++) { 19932f7816d4SBarry Smith jrow = ii[i]; 19942f7816d4SBarry Smith n = ii[i+1] - jrow; 19952f7816d4SBarry Smith sum1 = 0.0; 19962f7816d4SBarry Smith sum2 = 0.0; 19972f7816d4SBarry Smith sum3 = 0.0; 19982f7816d4SBarry Smith sum4 = 0.0; 19992f7816d4SBarry Smith sum5 = 0.0; 20002f7816d4SBarry Smith sum6 = 0.0; 20012f7816d4SBarry Smith sum7 = 0.0; 20022f7816d4SBarry Smith sum8 = 0.0; 20032f7816d4SBarry Smith sum9 = 0.0; 20042f7816d4SBarry Smith sum10 = 0.0; 20052f7816d4SBarry Smith sum11 = 0.0; 20062f7816d4SBarry Smith sum12 = 0.0; 20072f7816d4SBarry Smith sum13 = 0.0; 20082f7816d4SBarry Smith sum14 = 0.0; 20092f7816d4SBarry Smith sum15 = 0.0; 20102f7816d4SBarry Smith sum16 = 0.0; 20112f7816d4SBarry Smith for (j=0; j<n; j++) { 20122f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 20132f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 20142f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 20152f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 20162f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 20172f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 20182f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 20192f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 20202f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 20212f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 20222f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 20232f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 20242f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 20252f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 20262f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 20272f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 20282f7816d4SBarry Smith jrow++; 20292f7816d4SBarry Smith } 20302f7816d4SBarry Smith y[16*i] += sum1; 20312f7816d4SBarry Smith y[16*i+1] += sum2; 20322f7816d4SBarry Smith y[16*i+2] += sum3; 20332f7816d4SBarry Smith y[16*i+3] += sum4; 20342f7816d4SBarry Smith y[16*i+4] += sum5; 20352f7816d4SBarry Smith y[16*i+5] += sum6; 20362f7816d4SBarry Smith y[16*i+6] += sum7; 20372f7816d4SBarry Smith y[16*i+7] += sum8; 20382f7816d4SBarry Smith y[16*i+8] += sum9; 20392f7816d4SBarry Smith y[16*i+9] += sum10; 20402f7816d4SBarry Smith y[16*i+10] += sum11; 20412f7816d4SBarry Smith y[16*i+11] += sum12; 20422f7816d4SBarry Smith y[16*i+12] += sum13; 20432f7816d4SBarry Smith y[16*i+13] += sum14; 20442f7816d4SBarry Smith y[16*i+14] += sum15; 20452f7816d4SBarry Smith y[16*i+15] += sum16; 20462f7816d4SBarry Smith } 20472f7816d4SBarry Smith 2048efee365bSSatish Balay ierr = PetscLogFlops(32*a->nz);CHKERRQ(ierr); 20491ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 20501ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 20512f7816d4SBarry Smith PetscFunctionReturn(0); 20522f7816d4SBarry Smith } 20532f7816d4SBarry Smith 20542f7816d4SBarry Smith #undef __FUNCT__ 20552f7816d4SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_16" 2056dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 20572f7816d4SBarry Smith { 20582f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 20592f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 20602f7816d4SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 20612f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 2062dfbe8321SBarry Smith PetscErrorCode ierr; 2063899cda47SBarry Smith PetscInt m = b->AIJ->rmap.n,n,i,*idx; 20642f7816d4SBarry Smith 20652f7816d4SBarry Smith PetscFunctionBegin; 20662f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 20671ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 20681ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 20692f7816d4SBarry Smith for (i=0; i<m; i++) { 2070bfec09a0SHong Zhang idx = a->j + a->i[i] ; 2071bfec09a0SHong Zhang v = a->a + a->i[i] ; 20722f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 20732f7816d4SBarry Smith alpha1 = x[16*i]; 20742f7816d4SBarry Smith alpha2 = x[16*i+1]; 20752f7816d4SBarry Smith alpha3 = x[16*i+2]; 20762f7816d4SBarry Smith alpha4 = x[16*i+3]; 20772f7816d4SBarry Smith alpha5 = x[16*i+4]; 20782f7816d4SBarry Smith alpha6 = x[16*i+5]; 20792f7816d4SBarry Smith alpha7 = x[16*i+6]; 20802f7816d4SBarry Smith alpha8 = x[16*i+7]; 20812f7816d4SBarry Smith alpha9 = x[16*i+8]; 20822f7816d4SBarry Smith alpha10 = x[16*i+9]; 20832f7816d4SBarry Smith alpha11 = x[16*i+10]; 20842f7816d4SBarry Smith alpha12 = x[16*i+11]; 20852f7816d4SBarry Smith alpha13 = x[16*i+12]; 20862f7816d4SBarry Smith alpha14 = x[16*i+13]; 20872f7816d4SBarry Smith alpha15 = x[16*i+14]; 20882f7816d4SBarry Smith alpha16 = x[16*i+15]; 20892f7816d4SBarry Smith while (n-->0) { 20902f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 20912f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 20922f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 20932f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 20942f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 20952f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 20962f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 20972f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 20982f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 20992f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 21002f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 21012f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 21022f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 21032f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 21042f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 21052f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 21062f7816d4SBarry Smith idx++; v++; 21072f7816d4SBarry Smith } 21082f7816d4SBarry Smith } 2109efee365bSSatish Balay ierr = PetscLogFlops(32*a->nz);CHKERRQ(ierr); 21101ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 21111ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 211266ed3db0SBarry Smith PetscFunctionReturn(0); 211366ed3db0SBarry Smith } 211466ed3db0SBarry Smith 2115f4a53059SBarry Smith /*===================================================================================*/ 21164a2ae208SSatish Balay #undef __FUNCT__ 21174a2ae208SSatish Balay #define __FUNCT__ "MatMult_MPIMAIJ_dof" 2118dfbe8321SBarry Smith PetscErrorCode MatMult_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 2119f4a53059SBarry Smith { 21204cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2121dfbe8321SBarry Smith PetscErrorCode ierr; 2122f4a53059SBarry Smith 2123b24ad042SBarry Smith PetscFunctionBegin; 2124f4a53059SBarry Smith /* start the scatter */ 2125ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 21264cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->mult)(b->AIJ,xx,yy);CHKERRQ(ierr); 2127ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 21284cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,yy,yy);CHKERRQ(ierr); 2129f4a53059SBarry Smith PetscFunctionReturn(0); 2130f4a53059SBarry Smith } 2131f4a53059SBarry Smith 21324a2ae208SSatish Balay #undef __FUNCT__ 21334a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_MPIMAIJ_dof" 2134dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 21354cb9d9b8SBarry Smith { 21364cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2137dfbe8321SBarry Smith PetscErrorCode ierr; 2138b24ad042SBarry Smith 21394cb9d9b8SBarry Smith PetscFunctionBegin; 21404cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 21414cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->multtranspose)(b->AIJ,xx,yy);CHKERRQ(ierr); 2142ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,b->w,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 2143ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,b->w,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 21444cb9d9b8SBarry Smith PetscFunctionReturn(0); 21454cb9d9b8SBarry Smith } 21464cb9d9b8SBarry Smith 21474a2ae208SSatish Balay #undef __FUNCT__ 21484a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_MPIMAIJ_dof" 2149dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 21504cb9d9b8SBarry Smith { 21514cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2152dfbe8321SBarry Smith PetscErrorCode ierr; 21534cb9d9b8SBarry Smith 2154b24ad042SBarry Smith PetscFunctionBegin; 21554cb9d9b8SBarry Smith /* start the scatter */ 2156ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2157d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 2158ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2159717f2ec8SHong Zhang ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,zz,zz);CHKERRQ(ierr); 21604cb9d9b8SBarry Smith PetscFunctionReturn(0); 21614cb9d9b8SBarry Smith } 21624cb9d9b8SBarry Smith 21634a2ae208SSatish Balay #undef __FUNCT__ 21644a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_MPIMAIJ_dof" 2165dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 21664cb9d9b8SBarry Smith { 21674cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2168dfbe8321SBarry Smith PetscErrorCode ierr; 2169b24ad042SBarry Smith 21704cb9d9b8SBarry Smith PetscFunctionBegin; 21714cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 2172ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,b->w,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 2173d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multtransposeadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 2174ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,b->w,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 21754cb9d9b8SBarry Smith PetscFunctionReturn(0); 21764cb9d9b8SBarry Smith } 21774cb9d9b8SBarry Smith 217895ddefa2SHong Zhang /* ----------------------------------------------------------------*/ 21799c4fc4c7SBarry Smith #undef __FUNCT__ 21807ba1a0bfSKris Buschelman #define __FUNCT__ "MatPtAPSymbolic_SeqAIJ_SeqMAIJ" 21817ba1a0bfSKris Buschelman PetscErrorCode MatPtAPSymbolic_SeqAIJ_SeqMAIJ(Mat A,Mat PP,PetscReal fill,Mat *C) 21827ba1a0bfSKris Buschelman { 21837ba1a0bfSKris Buschelman /* This routine requires testing -- but it's getting better. */ 21847ba1a0bfSKris Buschelman PetscErrorCode ierr; 2185a1a86e44SBarry Smith PetscFreeSpaceList free_space=PETSC_NULL,current_space=PETSC_NULL; 21867ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp=(Mat_SeqMAIJ*)PP->data; 21877ba1a0bfSKris Buschelman Mat P=pp->AIJ; 21887ba1a0bfSKris Buschelman Mat_SeqAIJ *a=(Mat_SeqAIJ*)A->data,*p=(Mat_SeqAIJ*)P->data,*c; 21897ba1a0bfSKris Buschelman PetscInt *pti,*ptj,*ptJ,*ai=a->i,*aj=a->j,*ajj,*pi=p->i,*pj=p->j,*pjj; 21907ba1a0bfSKris Buschelman PetscInt *ci,*cj,*ptadenserow,*ptasparserow,*denserow,*sparserow,*ptaj; 2191899cda47SBarry Smith PetscInt an=A->cmap.N,am=A->rmap.N,pn=P->cmap.N,pm=P->rmap.N,ppdof=pp->dof,cn; 21927ba1a0bfSKris Buschelman PetscInt i,j,k,dof,pshift,ptnzi,arow,anzj,ptanzi,prow,pnzj,cnzi; 21937ba1a0bfSKris Buschelman MatScalar *ca; 21947ba1a0bfSKris Buschelman 21957ba1a0bfSKris Buschelman PetscFunctionBegin; 21967ba1a0bfSKris Buschelman /* Start timer */ 21977ba1a0bfSKris Buschelman ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,PP,0,0);CHKERRQ(ierr); 21987ba1a0bfSKris Buschelman 21997ba1a0bfSKris Buschelman /* Get ij structure of P^T */ 22007ba1a0bfSKris Buschelman ierr = MatGetSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 22017ba1a0bfSKris Buschelman 22027ba1a0bfSKris Buschelman cn = pn*ppdof; 22037ba1a0bfSKris Buschelman /* Allocate ci array, arrays for fill computation and */ 22047ba1a0bfSKris Buschelman /* free space for accumulating nonzero column info */ 22057ba1a0bfSKris Buschelman ierr = PetscMalloc((cn+1)*sizeof(PetscInt),&ci);CHKERRQ(ierr); 22067ba1a0bfSKris Buschelman ci[0] = 0; 22077ba1a0bfSKris Buschelman 22087ba1a0bfSKris Buschelman /* Work arrays for rows of P^T*A */ 22097ba1a0bfSKris Buschelman ierr = PetscMalloc((2*cn+2*an+1)*sizeof(PetscInt),&ptadenserow);CHKERRQ(ierr); 22107ba1a0bfSKris Buschelman ierr = PetscMemzero(ptadenserow,(2*cn+2*an+1)*sizeof(PetscInt));CHKERRQ(ierr); 22117ba1a0bfSKris Buschelman ptasparserow = ptadenserow + an; 22127ba1a0bfSKris Buschelman denserow = ptasparserow + an; 22137ba1a0bfSKris Buschelman sparserow = denserow + cn; 22147ba1a0bfSKris Buschelman 22157ba1a0bfSKris Buschelman /* Set initial free space to be nnz(A) scaled by aspect ratio of P. */ 22167ba1a0bfSKris Buschelman /* This should be reasonable if sparsity of PtAP is similar to that of A. */ 22177ba1a0bfSKris Buschelman /* Note, aspect ratio of P is the same as the aspect ratio of SeqAIJ inside P */ 2218a1a86e44SBarry Smith ierr = PetscFreeSpaceGet((ai[am]/pm)*pn,&free_space); 22197ba1a0bfSKris Buschelman current_space = free_space; 22207ba1a0bfSKris Buschelman 22217ba1a0bfSKris Buschelman /* Determine symbolic info for each row of C: */ 22227ba1a0bfSKris Buschelman for (i=0;i<pn;i++) { 22237ba1a0bfSKris Buschelman ptnzi = pti[i+1] - pti[i]; 22247ba1a0bfSKris Buschelman ptJ = ptj + pti[i]; 22257ba1a0bfSKris Buschelman for (dof=0;dof<ppdof;dof++) { 22267ba1a0bfSKris Buschelman ptanzi = 0; 22277ba1a0bfSKris Buschelman /* Determine symbolic row of PtA: */ 22287ba1a0bfSKris Buschelman for (j=0;j<ptnzi;j++) { 22297ba1a0bfSKris Buschelman /* Expand ptJ[j] by block size and shift by dof to get the right row of A */ 22307ba1a0bfSKris Buschelman arow = ptJ[j]*ppdof + dof; 22317ba1a0bfSKris Buschelman /* Nonzeros of P^T*A will be in same locations as any element of A in that row */ 22327ba1a0bfSKris Buschelman anzj = ai[arow+1] - ai[arow]; 22337ba1a0bfSKris Buschelman ajj = aj + ai[arow]; 22347ba1a0bfSKris Buschelman for (k=0;k<anzj;k++) { 22357ba1a0bfSKris Buschelman if (!ptadenserow[ajj[k]]) { 22367ba1a0bfSKris Buschelman ptadenserow[ajj[k]] = -1; 22377ba1a0bfSKris Buschelman ptasparserow[ptanzi++] = ajj[k]; 22387ba1a0bfSKris Buschelman } 22397ba1a0bfSKris Buschelman } 22407ba1a0bfSKris Buschelman } 22417ba1a0bfSKris Buschelman /* Using symbolic info for row of PtA, determine symbolic info for row of C: */ 22427ba1a0bfSKris Buschelman ptaj = ptasparserow; 22437ba1a0bfSKris Buschelman cnzi = 0; 22447ba1a0bfSKris Buschelman for (j=0;j<ptanzi;j++) { 22457ba1a0bfSKris Buschelman /* Get offset within block of P */ 22467ba1a0bfSKris Buschelman pshift = *ptaj%ppdof; 22477ba1a0bfSKris Buschelman /* Get block row of P */ 22487ba1a0bfSKris Buschelman prow = (*ptaj++)/ppdof; /* integer division */ 22497ba1a0bfSKris Buschelman /* P has same number of nonzeros per row as the compressed form */ 22507ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 22517ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 22527ba1a0bfSKris Buschelman for (k=0;k<pnzj;k++) { 22537ba1a0bfSKris Buschelman /* Locations in C are shifted by the offset within the block */ 22547ba1a0bfSKris Buschelman /* Note: we cannot use PetscLLAdd here because of the additional offset for the write location */ 22557ba1a0bfSKris Buschelman if (!denserow[pjj[k]*ppdof+pshift]) { 22567ba1a0bfSKris Buschelman denserow[pjj[k]*ppdof+pshift] = -1; 22577ba1a0bfSKris Buschelman sparserow[cnzi++] = pjj[k]*ppdof+pshift; 22587ba1a0bfSKris Buschelman } 22597ba1a0bfSKris Buschelman } 22607ba1a0bfSKris Buschelman } 22617ba1a0bfSKris Buschelman 22627ba1a0bfSKris Buschelman /* sort sparserow */ 22637ba1a0bfSKris Buschelman ierr = PetscSortInt(cnzi,sparserow);CHKERRQ(ierr); 22647ba1a0bfSKris Buschelman 22657ba1a0bfSKris Buschelman /* If free space is not available, make more free space */ 22667ba1a0bfSKris Buschelman /* Double the amount of total space in the list */ 22677ba1a0bfSKris Buschelman if (current_space->local_remaining<cnzi) { 2268a1a86e44SBarry Smith ierr = PetscFreeSpaceGet(current_space->total_array_size,¤t_space);CHKERRQ(ierr); 22697ba1a0bfSKris Buschelman } 22707ba1a0bfSKris Buschelman 22717ba1a0bfSKris Buschelman /* Copy data into free space, and zero out denserows */ 22727ba1a0bfSKris Buschelman ierr = PetscMemcpy(current_space->array,sparserow,cnzi*sizeof(PetscInt));CHKERRQ(ierr); 22737ba1a0bfSKris Buschelman current_space->array += cnzi; 22747ba1a0bfSKris Buschelman current_space->local_used += cnzi; 22757ba1a0bfSKris Buschelman current_space->local_remaining -= cnzi; 22767ba1a0bfSKris Buschelman 22777ba1a0bfSKris Buschelman for (j=0;j<ptanzi;j++) { 22787ba1a0bfSKris Buschelman ptadenserow[ptasparserow[j]] = 0; 22797ba1a0bfSKris Buschelman } 22807ba1a0bfSKris Buschelman for (j=0;j<cnzi;j++) { 22817ba1a0bfSKris Buschelman denserow[sparserow[j]] = 0; 22827ba1a0bfSKris Buschelman } 22837ba1a0bfSKris Buschelman /* Aside: Perhaps we should save the pta info for the numerical factorization. */ 22847ba1a0bfSKris Buschelman /* For now, we will recompute what is needed. */ 22857ba1a0bfSKris Buschelman ci[i*ppdof+1+dof] = ci[i*ppdof+dof] + cnzi; 22867ba1a0bfSKris Buschelman } 22877ba1a0bfSKris Buschelman } 22887ba1a0bfSKris Buschelman /* nnz is now stored in ci[ptm], column indices are in the list of free space */ 22897ba1a0bfSKris Buschelman /* Allocate space for cj, initialize cj, and */ 22907ba1a0bfSKris Buschelman /* destroy list of free space and other temporary array(s) */ 22917ba1a0bfSKris Buschelman ierr = PetscMalloc((ci[cn]+1)*sizeof(PetscInt),&cj);CHKERRQ(ierr); 2292a1a86e44SBarry Smith ierr = PetscFreeSpaceContiguous(&free_space,cj);CHKERRQ(ierr); 22937ba1a0bfSKris Buschelman ierr = PetscFree(ptadenserow);CHKERRQ(ierr); 22947ba1a0bfSKris Buschelman 22957ba1a0bfSKris Buschelman /* Allocate space for ca */ 22967ba1a0bfSKris Buschelman ierr = PetscMalloc((ci[cn]+1)*sizeof(MatScalar),&ca);CHKERRQ(ierr); 22977ba1a0bfSKris Buschelman ierr = PetscMemzero(ca,(ci[cn]+1)*sizeof(MatScalar));CHKERRQ(ierr); 22987ba1a0bfSKris Buschelman 22997ba1a0bfSKris Buschelman /* put together the new matrix */ 2300*7adad957SLisandro Dalcin ierr = MatCreateSeqAIJWithArrays(((PetscObject)A)->comm,cn,cn,ci,cj,ca,C);CHKERRQ(ierr); 23017ba1a0bfSKris Buschelman 23027ba1a0bfSKris Buschelman /* MatCreateSeqAIJWithArrays flags matrix so PETSc doesn't free the user's arrays. */ 23037ba1a0bfSKris Buschelman /* Since these are PETSc arrays, change flags to free them as necessary. */ 23047ba1a0bfSKris Buschelman c = (Mat_SeqAIJ *)((*C)->data); 2305e6b907acSBarry Smith c->free_a = PETSC_TRUE; 2306e6b907acSBarry Smith c->free_ij = PETSC_TRUE; 23077ba1a0bfSKris Buschelman c->nonew = 0; 23087ba1a0bfSKris Buschelman 23097ba1a0bfSKris Buschelman /* Clean up. */ 23107ba1a0bfSKris Buschelman ierr = MatRestoreSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 23117ba1a0bfSKris Buschelman 23127ba1a0bfSKris Buschelman ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,PP,0,0);CHKERRQ(ierr); 23137ba1a0bfSKris Buschelman PetscFunctionReturn(0); 23147ba1a0bfSKris Buschelman } 23157ba1a0bfSKris Buschelman 23167ba1a0bfSKris Buschelman #undef __FUNCT__ 23177ba1a0bfSKris Buschelman #define __FUNCT__ "MatPtAPNumeric_SeqAIJ_SeqMAIJ" 23187ba1a0bfSKris Buschelman PetscErrorCode MatPtAPNumeric_SeqAIJ_SeqMAIJ(Mat A,Mat PP,Mat C) 23197ba1a0bfSKris Buschelman { 23207ba1a0bfSKris Buschelman /* This routine requires testing -- first draft only */ 23217ba1a0bfSKris Buschelman PetscErrorCode ierr; 23227ba1a0bfSKris Buschelman PetscInt flops=0; 23237ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp=(Mat_SeqMAIJ*)PP->data; 23247ba1a0bfSKris Buschelman Mat P=pp->AIJ; 23257ba1a0bfSKris Buschelman Mat_SeqAIJ *a = (Mat_SeqAIJ *) A->data; 23267ba1a0bfSKris Buschelman Mat_SeqAIJ *p = (Mat_SeqAIJ *) P->data; 23277ba1a0bfSKris Buschelman Mat_SeqAIJ *c = (Mat_SeqAIJ *) C->data; 23287ba1a0bfSKris Buschelman PetscInt *ai=a->i,*aj=a->j,*apj,*apjdense,*pi=p->i,*pj=p->j,*pJ=p->j,*pjj; 23297ba1a0bfSKris Buschelman PetscInt *ci=c->i,*cj=c->j,*cjj; 2330899cda47SBarry Smith PetscInt am=A->rmap.N,cn=C->cmap.N,cm=C->rmap.N,ppdof=pp->dof; 23317ba1a0bfSKris Buschelman PetscInt i,j,k,pshift,poffset,anzi,pnzi,apnzj,nextap,pnzj,prow,crow; 23327ba1a0bfSKris Buschelman MatScalar *aa=a->a,*apa,*pa=p->a,*pA=p->a,*paj,*ca=c->a,*caj; 23337ba1a0bfSKris Buschelman 23347ba1a0bfSKris Buschelman PetscFunctionBegin; 23357ba1a0bfSKris Buschelman /* Allocate temporary array for storage of one row of A*P */ 23367ba1a0bfSKris Buschelman ierr = PetscMalloc(cn*(sizeof(MatScalar)+2*sizeof(PetscInt)),&apa);CHKERRQ(ierr); 23377ba1a0bfSKris Buschelman ierr = PetscMemzero(apa,cn*(sizeof(MatScalar)+2*sizeof(PetscInt)));CHKERRQ(ierr); 23387ba1a0bfSKris Buschelman 23397ba1a0bfSKris Buschelman apj = (PetscInt *)(apa + cn); 23407ba1a0bfSKris Buschelman apjdense = apj + cn; 23417ba1a0bfSKris Buschelman 23427ba1a0bfSKris Buschelman /* Clear old values in C */ 23437ba1a0bfSKris Buschelman ierr = PetscMemzero(ca,ci[cm]*sizeof(MatScalar));CHKERRQ(ierr); 23447ba1a0bfSKris Buschelman 23457ba1a0bfSKris Buschelman for (i=0;i<am;i++) { 23467ba1a0bfSKris Buschelman /* Form sparse row of A*P */ 23477ba1a0bfSKris Buschelman anzi = ai[i+1] - ai[i]; 23487ba1a0bfSKris Buschelman apnzj = 0; 23497ba1a0bfSKris Buschelman for (j=0;j<anzi;j++) { 23507ba1a0bfSKris Buschelman /* Get offset within block of P */ 23517ba1a0bfSKris Buschelman pshift = *aj%ppdof; 23527ba1a0bfSKris Buschelman /* Get block row of P */ 23537ba1a0bfSKris Buschelman prow = *aj++/ppdof; /* integer division */ 23547ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 23557ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 23567ba1a0bfSKris Buschelman paj = pa + pi[prow]; 23577ba1a0bfSKris Buschelman for (k=0;k<pnzj;k++) { 23587ba1a0bfSKris Buschelman poffset = pjj[k]*ppdof+pshift; 23597ba1a0bfSKris Buschelman if (!apjdense[poffset]) { 23607ba1a0bfSKris Buschelman apjdense[poffset] = -1; 23617ba1a0bfSKris Buschelman apj[apnzj++] = poffset; 23627ba1a0bfSKris Buschelman } 23637ba1a0bfSKris Buschelman apa[poffset] += (*aa)*paj[k]; 23647ba1a0bfSKris Buschelman } 23657ba1a0bfSKris Buschelman flops += 2*pnzj; 23667ba1a0bfSKris Buschelman aa++; 23677ba1a0bfSKris Buschelman } 23687ba1a0bfSKris Buschelman 23697ba1a0bfSKris Buschelman /* Sort the j index array for quick sparse axpy. */ 23707ba1a0bfSKris Buschelman /* Note: a array does not need sorting as it is in dense storage locations. */ 23717ba1a0bfSKris Buschelman ierr = PetscSortInt(apnzj,apj);CHKERRQ(ierr); 23727ba1a0bfSKris Buschelman 23737ba1a0bfSKris Buschelman /* Compute P^T*A*P using outer product (P^T)[:,j]*(A*P)[j,:]. */ 23747ba1a0bfSKris Buschelman prow = i/ppdof; /* integer division */ 23757ba1a0bfSKris Buschelman pshift = i%ppdof; 23767ba1a0bfSKris Buschelman poffset = pi[prow]; 23777ba1a0bfSKris Buschelman pnzi = pi[prow+1] - poffset; 23787ba1a0bfSKris Buschelman /* Reset pJ and pA so we can traverse the same row of P 'dof' times. */ 23797ba1a0bfSKris Buschelman pJ = pj+poffset; 23807ba1a0bfSKris Buschelman pA = pa+poffset; 23817ba1a0bfSKris Buschelman for (j=0;j<pnzi;j++) { 23827ba1a0bfSKris Buschelman crow = (*pJ)*ppdof+pshift; 23837ba1a0bfSKris Buschelman cjj = cj + ci[crow]; 23847ba1a0bfSKris Buschelman caj = ca + ci[crow]; 23857ba1a0bfSKris Buschelman pJ++; 23867ba1a0bfSKris Buschelman /* Perform sparse axpy operation. Note cjj includes apj. */ 23877ba1a0bfSKris Buschelman for (k=0,nextap=0;nextap<apnzj;k++) { 23887ba1a0bfSKris Buschelman if (cjj[k]==apj[nextap]) { 23897ba1a0bfSKris Buschelman caj[k] += (*pA)*apa[apj[nextap++]]; 23907ba1a0bfSKris Buschelman } 23917ba1a0bfSKris Buschelman } 23927ba1a0bfSKris Buschelman flops += 2*apnzj; 23937ba1a0bfSKris Buschelman pA++; 23947ba1a0bfSKris Buschelman } 23957ba1a0bfSKris Buschelman 23967ba1a0bfSKris Buschelman /* Zero the current row info for A*P */ 23977ba1a0bfSKris Buschelman for (j=0;j<apnzj;j++) { 23987ba1a0bfSKris Buschelman apa[apj[j]] = 0.; 23997ba1a0bfSKris Buschelman apjdense[apj[j]] = 0; 24007ba1a0bfSKris Buschelman } 24017ba1a0bfSKris Buschelman } 24027ba1a0bfSKris Buschelman 24037ba1a0bfSKris Buschelman /* Assemble the final matrix and clean up */ 24047ba1a0bfSKris Buschelman ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 24057ba1a0bfSKris Buschelman ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 24067ba1a0bfSKris Buschelman ierr = PetscFree(apa);CHKERRQ(ierr); 24077ba1a0bfSKris Buschelman ierr = PetscLogFlops(flops);CHKERRQ(ierr); 240895ddefa2SHong Zhang PetscFunctionReturn(0); 240995ddefa2SHong Zhang } 24107ba1a0bfSKris Buschelman 241195ddefa2SHong Zhang #undef __FUNCT__ 241295ddefa2SHong Zhang #define __FUNCT__ "MatPtAPSymbolic_MPIAIJ_MPIMAIJ" 241395ddefa2SHong Zhang PetscErrorCode MatPtAPSymbolic_MPIAIJ_MPIMAIJ(Mat A,Mat PP,PetscReal fill,Mat *C) 241495ddefa2SHong Zhang { 241595ddefa2SHong Zhang PetscErrorCode ierr; 241695ddefa2SHong Zhang 241795ddefa2SHong Zhang PetscFunctionBegin; 241895ddefa2SHong Zhang /* MatPtAPSymbolic_MPIAIJ_MPIMAIJ() is not implemented yet. Convert PP to mpiaij format */ 241995ddefa2SHong Zhang ierr = MatConvert(PP,MATMPIAIJ,MAT_REUSE_MATRIX,&PP);CHKERRQ(ierr); 242095ddefa2SHong Zhang ierr =(*PP->ops->ptapsymbolic)(A,PP,fill,C);CHKERRQ(ierr); 242195ddefa2SHong Zhang PetscFunctionReturn(0); 242295ddefa2SHong Zhang } 242395ddefa2SHong Zhang 242495ddefa2SHong Zhang #undef __FUNCT__ 242595ddefa2SHong Zhang #define __FUNCT__ "MatPtAPNumeric_MPIAIJ_MPIMAIJ" 242695ddefa2SHong Zhang PetscErrorCode MatPtAPNumeric_MPIAIJ_MPIMAIJ(Mat A,Mat PP,Mat C) 242795ddefa2SHong Zhang { 242895ddefa2SHong Zhang PetscFunctionBegin; 242995ddefa2SHong Zhang SETERRQ(PETSC_ERR_SUP,"MatPtAPNumeric is not implemented for MPIMAIJ matrix yet"); 24307ba1a0bfSKris Buschelman PetscFunctionReturn(0); 24317ba1a0bfSKris Buschelman } 24327ba1a0bfSKris Buschelman 2433be1d678aSKris Buschelman EXTERN_C_BEGIN 24347ba1a0bfSKris Buschelman #undef __FUNCT__ 24350fd73130SBarry Smith #define __FUNCT__ "MatConvert_SeqMAIJ_SeqAIJ" 2436f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatConvert_SeqMAIJ_SeqAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat) 24379c4fc4c7SBarry Smith { 24389c4fc4c7SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2439ceb03754SKris Buschelman Mat a = b->AIJ,B; 24409c4fc4c7SBarry Smith Mat_SeqAIJ *aij = (Mat_SeqAIJ*)a->data; 24419c4fc4c7SBarry Smith PetscErrorCode ierr; 24420fd73130SBarry Smith PetscInt m,n,i,ncols,*ilen,nmax = 0,*icols,j,k,ii,dof = b->dof; 2443ba8c8a56SBarry Smith PetscInt *cols; 2444ba8c8a56SBarry Smith PetscScalar *vals; 24459c4fc4c7SBarry Smith 24469c4fc4c7SBarry Smith PetscFunctionBegin; 24479c4fc4c7SBarry Smith ierr = MatGetSize(a,&m,&n);CHKERRQ(ierr); 24487c307921SBarry Smith ierr = PetscMalloc(dof*m*sizeof(PetscInt),&ilen);CHKERRQ(ierr); 24499c4fc4c7SBarry Smith for (i=0; i<m; i++) { 24509c4fc4c7SBarry Smith nmax = PetscMax(nmax,aij->ilen[i]); 24510fd73130SBarry Smith for (j=0; j<dof; j++) { 24520fd73130SBarry Smith ilen[dof*i+j] = aij->ilen[i]; 24539c4fc4c7SBarry Smith } 24549c4fc4c7SBarry Smith } 2455ceb03754SKris Buschelman ierr = MatCreateSeqAIJ(PETSC_COMM_SELF,dof*m,dof*n,0,ilen,&B);CHKERRQ(ierr); 24569c4fc4c7SBarry Smith ierr = PetscFree(ilen);CHKERRQ(ierr); 24579c4fc4c7SBarry Smith ierr = PetscMalloc(nmax*sizeof(PetscInt),&icols);CHKERRQ(ierr); 24589c4fc4c7SBarry Smith ii = 0; 24599c4fc4c7SBarry Smith for (i=0; i<m; i++) { 2460ba8c8a56SBarry Smith ierr = MatGetRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 24610fd73130SBarry Smith for (j=0; j<dof; j++) { 24629c4fc4c7SBarry Smith for (k=0; k<ncols; k++) { 24630fd73130SBarry Smith icols[k] = dof*cols[k]+j; 24649c4fc4c7SBarry Smith } 2465ceb03754SKris Buschelman ierr = MatSetValues_SeqAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 24669c4fc4c7SBarry Smith ii++; 24679c4fc4c7SBarry Smith } 2468ba8c8a56SBarry Smith ierr = MatRestoreRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 24699c4fc4c7SBarry Smith } 24709c4fc4c7SBarry Smith ierr = PetscFree(icols);CHKERRQ(ierr); 2471ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2472ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2473ceb03754SKris Buschelman 2474ceb03754SKris Buschelman if (reuse == MAT_REUSE_MATRIX) { 24758ab5b326SKris Buschelman ierr = MatHeaderReplace(A,B);CHKERRQ(ierr); 2476c3d102feSKris Buschelman } else { 2477ceb03754SKris Buschelman *newmat = B; 2478c3d102feSKris Buschelman } 24799c4fc4c7SBarry Smith PetscFunctionReturn(0); 24809c4fc4c7SBarry Smith } 2481be1d678aSKris Buschelman EXTERN_C_END 24829c4fc4c7SBarry Smith 24830fd73130SBarry Smith #include "src/mat/impls/aij/mpi/mpiaij.h" 2484be1d678aSKris Buschelman 2485be1d678aSKris Buschelman EXTERN_C_BEGIN 24860fd73130SBarry Smith #undef __FUNCT__ 24870fd73130SBarry Smith #define __FUNCT__ "MatConvert_MPIMAIJ_MPIAIJ" 2488f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatConvert_MPIMAIJ_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat) 24890fd73130SBarry Smith { 24900fd73130SBarry Smith Mat_MPIMAIJ *maij = (Mat_MPIMAIJ*)A->data; 2491ceb03754SKris Buschelman Mat MatAIJ = ((Mat_SeqMAIJ*)maij->AIJ->data)->AIJ,B; 24920fd73130SBarry Smith Mat MatOAIJ = ((Mat_SeqMAIJ*)maij->OAIJ->data)->AIJ; 24930fd73130SBarry Smith Mat_SeqAIJ *AIJ = (Mat_SeqAIJ*) MatAIJ->data; 24940fd73130SBarry Smith Mat_SeqAIJ *OAIJ =(Mat_SeqAIJ*) MatOAIJ->data; 24950fd73130SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ*) maij->A->data; 2496910ba992SMatthew Knepley PetscInt dof = maij->dof,i,j,*dnz = PETSC_NULL,*onz = PETSC_NULL,nmax = 0,onmax = 0; 2497910ba992SMatthew Knepley PetscInt *oicols = PETSC_NULL,*icols = PETSC_NULL,ncols,*cols = PETSC_NULL,oncols,*ocols = PETSC_NULL; 24980fd73130SBarry Smith PetscInt rstart,cstart,*garray,ii,k; 24990fd73130SBarry Smith PetscErrorCode ierr; 25000fd73130SBarry Smith PetscScalar *vals,*ovals; 25010fd73130SBarry Smith 25020fd73130SBarry Smith PetscFunctionBegin; 2503899cda47SBarry Smith ierr = PetscMalloc2(A->rmap.n,PetscInt,&dnz,A->rmap.n,PetscInt,&onz);CHKERRQ(ierr); 2504899cda47SBarry Smith for (i=0; i<A->rmap.n/dof; i++) { 25050fd73130SBarry Smith nmax = PetscMax(nmax,AIJ->ilen[i]); 25060fd73130SBarry Smith onmax = PetscMax(onmax,OAIJ->ilen[i]); 25070fd73130SBarry Smith for (j=0; j<dof; j++) { 25080fd73130SBarry Smith dnz[dof*i+j] = AIJ->ilen[i]; 25090fd73130SBarry Smith onz[dof*i+j] = OAIJ->ilen[i]; 25100fd73130SBarry Smith } 25110fd73130SBarry Smith } 2512*7adad957SLisandro Dalcin ierr = MatCreateMPIAIJ(((PetscObject)A)->comm,A->rmap.n,A->cmap.n,A->rmap.N,A->cmap.N,0,dnz,0,onz,&B);CHKERRQ(ierr); 25130fd73130SBarry Smith ierr = PetscFree2(dnz,onz);CHKERRQ(ierr); 25140fd73130SBarry Smith 25157a1a7badSBarry Smith ierr = PetscMalloc2(nmax,PetscInt,&icols,onmax,PetscInt,&oicols);CHKERRQ(ierr); 25169b5a856fSSatish Balay rstart = dof*maij->A->rmap.rstart; 25179b5a856fSSatish Balay cstart = dof*maij->A->cmap.rstart; 25180fd73130SBarry Smith garray = mpiaij->garray; 25190fd73130SBarry Smith 25200fd73130SBarry Smith ii = rstart; 2521899cda47SBarry Smith for (i=0; i<A->rmap.n/dof; i++) { 25220fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 25230fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 25240fd73130SBarry Smith for (j=0; j<dof; j++) { 25250fd73130SBarry Smith for (k=0; k<ncols; k++) { 25260fd73130SBarry Smith icols[k] = cstart + dof*cols[k]+j; 25270fd73130SBarry Smith } 25280fd73130SBarry Smith for (k=0; k<oncols; k++) { 25290fd73130SBarry Smith oicols[k] = dof*garray[ocols[k]]+j; 25300fd73130SBarry Smith } 2531ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 2532ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,oncols,oicols,ovals,INSERT_VALUES);CHKERRQ(ierr); 25330fd73130SBarry Smith ii++; 25340fd73130SBarry Smith } 25350fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 25360fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 25370fd73130SBarry Smith } 25380fd73130SBarry Smith ierr = PetscFree2(icols,oicols);CHKERRQ(ierr); 25390fd73130SBarry Smith 2540ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2541ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2542ceb03754SKris Buschelman 2543ceb03754SKris Buschelman if (reuse == MAT_REUSE_MATRIX) { 2544*7adad957SLisandro Dalcin PetscInt refct = ((PetscObject)A)->refct; /* save ((PetscObject)A)->refct */ 2545*7adad957SLisandro Dalcin ((PetscObject)A)->refct = 1; 25468ab5b326SKris Buschelman ierr = MatHeaderReplace(A,B);CHKERRQ(ierr); 2547*7adad957SLisandro Dalcin ((PetscObject)A)->refct = refct; /* restore ((PetscObject)A)->refct */ 2548c3d102feSKris Buschelman } else { 2549ceb03754SKris Buschelman *newmat = B; 2550c3d102feSKris Buschelman } 25510fd73130SBarry Smith PetscFunctionReturn(0); 25520fd73130SBarry Smith } 2553be1d678aSKris Buschelman EXTERN_C_END 25540fd73130SBarry Smith 25550fd73130SBarry Smith 2556bcc973b7SBarry Smith /* ---------------------------------------------------------------------------------- */ 25575983afb6SSatish Balay /*MC 25580bad9183SKris Buschelman MatCreateMAIJ - Creates a matrix type providing restriction and interpolation 25590bad9183SKris Buschelman operations for multicomponent problems. It interpolates each component the same 25600bad9183SKris Buschelman way independently. The matrix type is based on MATSEQAIJ for sequential matrices, 25610bad9183SKris Buschelman and MATMPIAIJ for distributed matrices. 25620bad9183SKris Buschelman 25630bad9183SKris Buschelman Operations provided: 25640fd73130SBarry Smith + MatMult 25650bad9183SKris Buschelman . MatMultTranspose 25660bad9183SKris Buschelman . MatMultAdd 25670bad9183SKris Buschelman . MatMultTransposeAdd 25680fd73130SBarry Smith - MatView 25690bad9183SKris Buschelman 25700bad9183SKris Buschelman Level: advanced 25710bad9183SKris Buschelman 25720bad9183SKris Buschelman M*/ 25734a2ae208SSatish Balay #undef __FUNCT__ 25744a2ae208SSatish Balay #define __FUNCT__ "MatCreateMAIJ" 2575be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatCreateMAIJ(Mat A,PetscInt dof,Mat *maij) 257682b1193eSBarry Smith { 2577dfbe8321SBarry Smith PetscErrorCode ierr; 2578b24ad042SBarry Smith PetscMPIInt size; 2579b24ad042SBarry Smith PetscInt n; 25804cb9d9b8SBarry Smith Mat_MPIMAIJ *b; 258182b1193eSBarry Smith Mat B; 258282b1193eSBarry Smith 258382b1193eSBarry Smith PetscFunctionBegin; 2584d72c5c08SBarry Smith ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); 2585d72c5c08SBarry Smith 2586d72c5c08SBarry Smith if (dof == 1) { 2587d72c5c08SBarry Smith *maij = A; 2588d72c5c08SBarry Smith } else { 2589*7adad957SLisandro Dalcin ierr = MatCreate(((PetscObject)A)->comm,&B);CHKERRQ(ierr); 2590899cda47SBarry Smith ierr = MatSetSizes(B,dof*A->rmap.n,dof*A->cmap.n,dof*A->rmap.N,dof*A->cmap.N);CHKERRQ(ierr); 2591cd3bbe55SBarry Smith B->assembled = PETSC_TRUE; 2592d72c5c08SBarry Smith 2593*7adad957SLisandro Dalcin ierr = MPI_Comm_size(((PetscObject)A)->comm,&size);CHKERRQ(ierr); 2594f4a53059SBarry Smith if (size == 1) { 2595b9b97703SBarry Smith ierr = MatSetType(B,MATSEQMAIJ);CHKERRQ(ierr); 25964cb9d9b8SBarry Smith B->ops->destroy = MatDestroy_SeqMAIJ; 25970fd73130SBarry Smith B->ops->view = MatView_SeqMAIJ; 2598b9b97703SBarry Smith b = (Mat_MPIMAIJ*)B->data; 2599b9b97703SBarry Smith b->dof = dof; 26004cb9d9b8SBarry Smith b->AIJ = A; 2601d72c5c08SBarry Smith if (dof == 2) { 2602cd3bbe55SBarry Smith B->ops->mult = MatMult_SeqMAIJ_2; 2603cd3bbe55SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_2; 2604cd3bbe55SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_2; 2605cd3bbe55SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_2; 2606bcc973b7SBarry Smith } else if (dof == 3) { 2607bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_3; 2608bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_3; 2609bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_3; 2610bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_3; 2611bcc973b7SBarry Smith } else if (dof == 4) { 2612bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_4; 2613bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_4; 2614bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_4; 2615bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_4; 2616f9fae5adSBarry Smith } else if (dof == 5) { 2617f9fae5adSBarry Smith B->ops->mult = MatMult_SeqMAIJ_5; 2618f9fae5adSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_5; 2619f9fae5adSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_5; 2620f9fae5adSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_5; 26216cd98798SBarry Smith } else if (dof == 6) { 26226cd98798SBarry Smith B->ops->mult = MatMult_SeqMAIJ_6; 26236cd98798SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_6; 26246cd98798SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_6; 26256cd98798SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_6; 2626ed8eea03SBarry Smith } else if (dof == 7) { 2627ed8eea03SBarry Smith B->ops->mult = MatMult_SeqMAIJ_7; 2628ed8eea03SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_7; 2629ed8eea03SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_7; 2630ed8eea03SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_7; 263166ed3db0SBarry Smith } else if (dof == 8) { 263266ed3db0SBarry Smith B->ops->mult = MatMult_SeqMAIJ_8; 263366ed3db0SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_8; 263466ed3db0SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_8; 263566ed3db0SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_8; 26362b692628SMatthew Knepley } else if (dof == 9) { 26372b692628SMatthew Knepley B->ops->mult = MatMult_SeqMAIJ_9; 26382b692628SMatthew Knepley B->ops->multadd = MatMultAdd_SeqMAIJ_9; 26392b692628SMatthew Knepley B->ops->multtranspose = MatMultTranspose_SeqMAIJ_9; 26402b692628SMatthew Knepley B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_9; 2641b9cda22cSBarry Smith } else if (dof == 10) { 2642b9cda22cSBarry Smith B->ops->mult = MatMult_SeqMAIJ_10; 2643b9cda22cSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_10; 2644b9cda22cSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_10; 2645b9cda22cSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_10; 26462f7816d4SBarry Smith } else if (dof == 16) { 26472f7816d4SBarry Smith B->ops->mult = MatMult_SeqMAIJ_16; 26482f7816d4SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_16; 26492f7816d4SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_16; 26502f7816d4SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_16; 265182b1193eSBarry Smith } else { 265277431f27SBarry Smith SETERRQ1(PETSC_ERR_SUP,"Cannot handle a dof of %D. Send request for code to petsc-maint@mcs.anl.gov\n",dof); 265382b1193eSBarry Smith } 26547ba1a0bfSKris Buschelman B->ops->ptapsymbolic_seqaij = MatPtAPSymbolic_SeqAIJ_SeqMAIJ; 26557ba1a0bfSKris Buschelman B->ops->ptapnumeric_seqaij = MatPtAPNumeric_SeqAIJ_SeqMAIJ; 26569c4fc4c7SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_seqmaij_seqaij_C","MatConvert_SeqMAIJ_SeqAIJ",MatConvert_SeqMAIJ_SeqAIJ);CHKERRQ(ierr); 2657f4a53059SBarry Smith } else { 2658f4a53059SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)A->data; 2659f4a53059SBarry Smith IS from,to; 2660f4a53059SBarry Smith Vec gvec; 2661b24ad042SBarry Smith PetscInt *garray,i; 2662f4a53059SBarry Smith 2663b9b97703SBarry Smith ierr = MatSetType(B,MATMPIMAIJ);CHKERRQ(ierr); 2664d72c5c08SBarry Smith B->ops->destroy = MatDestroy_MPIMAIJ; 26650fd73130SBarry Smith B->ops->view = MatView_MPIMAIJ; 2666b9b97703SBarry Smith b = (Mat_MPIMAIJ*)B->data; 2667b9b97703SBarry Smith b->dof = dof; 2668b9b97703SBarry Smith b->A = A; 26694cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->A,dof,&b->AIJ);CHKERRQ(ierr); 26704cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->B,dof,&b->OAIJ);CHKERRQ(ierr); 26714cb9d9b8SBarry Smith 2672f4a53059SBarry Smith ierr = VecGetSize(mpiaij->lvec,&n);CHKERRQ(ierr); 2673f4a53059SBarry Smith ierr = VecCreateSeq(PETSC_COMM_SELF,n*dof,&b->w);CHKERRQ(ierr); 267413288a74SBarry Smith ierr = VecSetBlockSize(b->w,dof);CHKERRQ(ierr); 2675f4a53059SBarry Smith 2676f4a53059SBarry Smith /* create two temporary Index sets for build scatter gather */ 2677b24ad042SBarry Smith ierr = PetscMalloc((n+1)*sizeof(PetscInt),&garray);CHKERRQ(ierr); 2678f4a53059SBarry Smith for (i=0; i<n; i++) garray[i] = dof*mpiaij->garray[i]; 2679*7adad957SLisandro Dalcin ierr = ISCreateBlock(((PetscObject)A)->comm,dof,n,garray,&from);CHKERRQ(ierr); 2680f4a53059SBarry Smith ierr = PetscFree(garray);CHKERRQ(ierr); 2681f4a53059SBarry Smith ierr = ISCreateStride(PETSC_COMM_SELF,n*dof,0,1,&to);CHKERRQ(ierr); 2682f4a53059SBarry Smith 2683f4a53059SBarry Smith /* create temporary global vector to generate scatter context */ 2684*7adad957SLisandro Dalcin ierr = VecCreateMPI(((PetscObject)A)->comm,dof*A->cmap.n,dof*A->cmap.N,&gvec);CHKERRQ(ierr); 268513288a74SBarry Smith ierr = VecSetBlockSize(gvec,dof);CHKERRQ(ierr); 2686f4a53059SBarry Smith 2687f4a53059SBarry Smith /* generate the scatter context */ 2688f4a53059SBarry Smith ierr = VecScatterCreate(gvec,from,b->w,to,&b->ctx);CHKERRQ(ierr); 2689f4a53059SBarry Smith 2690f4a53059SBarry Smith ierr = ISDestroy(from);CHKERRQ(ierr); 2691f4a53059SBarry Smith ierr = ISDestroy(to);CHKERRQ(ierr); 2692f4a53059SBarry Smith ierr = VecDestroy(gvec);CHKERRQ(ierr); 2693f4a53059SBarry Smith 2694f4a53059SBarry Smith B->ops->mult = MatMult_MPIMAIJ_dof; 26954cb9d9b8SBarry Smith B->ops->multtranspose = MatMultTranspose_MPIMAIJ_dof; 26964cb9d9b8SBarry Smith B->ops->multadd = MatMultAdd_MPIMAIJ_dof; 26974cb9d9b8SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_MPIMAIJ_dof; 269895ddefa2SHong Zhang B->ops->ptapsymbolic_mpiaij = MatPtAPSymbolic_MPIAIJ_MPIMAIJ; 269995ddefa2SHong Zhang B->ops->ptapnumeric_mpiaij = MatPtAPNumeric_MPIAIJ_MPIMAIJ; 27000fd73130SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_mpimaij_mpiaij_C","MatConvert_MPIMAIJ_MPIAIJ",MatConvert_MPIMAIJ_MPIAIJ);CHKERRQ(ierr); 2701f4a53059SBarry Smith } 2702cd3bbe55SBarry Smith *maij = B; 27030fd73130SBarry Smith ierr = MatView_Private(B);CHKERRQ(ierr); 2704d72c5c08SBarry Smith } 270582b1193eSBarry Smith PetscFunctionReturn(0); 270682b1193eSBarry Smith } 270782b1193eSBarry Smith 270882b1193eSBarry Smith 270982b1193eSBarry Smith 271082b1193eSBarry Smith 271182b1193eSBarry Smith 271282b1193eSBarry Smith 271382b1193eSBarry Smith 271482b1193eSBarry Smith 271582b1193eSBarry Smith 271682b1193eSBarry Smith 271782b1193eSBarry Smith 271882b1193eSBarry Smith 2719