1be1d678aSKris Buschelman 282b1193eSBarry Smith /* 3cd3bbe55SBarry Smith Defines the basic matrix operations for the MAIJ matrix storage format. 4cd3bbe55SBarry Smith This format is used for restriction and interpolation operations for 5cd3bbe55SBarry Smith multicomponent problems. It interpolates each component the same way 6cd3bbe55SBarry Smith independently. 7cd3bbe55SBarry Smith 8cd3bbe55SBarry Smith We provide: 9cd3bbe55SBarry Smith MatMult() 10cd3bbe55SBarry Smith MatMultTranspose() 11cd3bbe55SBarry Smith MatMultTransposeAdd() 12cd3bbe55SBarry Smith MatMultAdd() 13cd3bbe55SBarry Smith and 14cd3bbe55SBarry Smith MatCreateMAIJ(Mat,dof,Mat*) 15f4a53059SBarry Smith 16f4a53059SBarry Smith This single directory handles both the sequential and parallel codes 1782b1193eSBarry Smith */ 1882b1193eSBarry Smith 19c6db04a5SJed Brown #include <../src/mat/impls/maij/maij.h> /*I "petscmat.h" I*/ 20c6db04a5SJed Brown #include <../src/mat/utils/freespace.h> 2182b1193eSBarry Smith 22b350b9acSSatish Balay /*@ 23ff585edeSJed Brown MatMAIJGetAIJ - Get the AIJ matrix describing the blockwise action of the MAIJ matrix 24ff585edeSJed Brown 25ff585edeSJed Brown Not Collective, but if the MAIJ matrix is parallel, the AIJ matrix is also parallel 26ff585edeSJed Brown 27ff585edeSJed Brown Input Parameter: 28ff585edeSJed Brown . A - the MAIJ matrix 29ff585edeSJed Brown 30ff585edeSJed Brown Output Parameter: 31ff585edeSJed Brown . B - the AIJ matrix 32ff585edeSJed Brown 33ff585edeSJed Brown Level: advanced 34ff585edeSJed Brown 35*95452b02SPatrick Sanan Notes: 36*95452b02SPatrick Sanan The reference count on the AIJ matrix is not increased so you should not destroy it. 37ff585edeSJed Brown 38ff585edeSJed Brown .seealso: MatCreateMAIJ() 39ff585edeSJed Brown @*/ 407087cfbeSBarry Smith PetscErrorCode MatMAIJGetAIJ(Mat A,Mat *B) 41b9b97703SBarry Smith { 42dfbe8321SBarry Smith PetscErrorCode ierr; 43ace3abfcSBarry Smith PetscBool ismpimaij,isseqmaij; 44b9b97703SBarry Smith 45b9b97703SBarry Smith PetscFunctionBegin; 46251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIMAIJ,&ismpimaij);CHKERRQ(ierr); 47251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQMAIJ,&isseqmaij);CHKERRQ(ierr); 48b9b97703SBarry Smith if (ismpimaij) { 49b9b97703SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 50b9b97703SBarry Smith 51b9b97703SBarry Smith *B = b->A; 52b9b97703SBarry Smith } else if (isseqmaij) { 53b9b97703SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 54b9b97703SBarry Smith 55b9b97703SBarry Smith *B = b->AIJ; 56b9b97703SBarry Smith } else { 57b9b97703SBarry Smith *B = A; 58b9b97703SBarry Smith } 59b9b97703SBarry Smith PetscFunctionReturn(0); 60b9b97703SBarry Smith } 61b9b97703SBarry Smith 62480dffcfSJed Brown /*@ 63ff585edeSJed Brown MatMAIJRedimension - Get an MAIJ matrix with the same action, but for a different block size 64ff585edeSJed Brown 653f9fe445SBarry Smith Logically Collective 66ff585edeSJed Brown 67ff585edeSJed Brown Input Parameter: 68ff585edeSJed Brown + A - the MAIJ matrix 69ff585edeSJed Brown - dof - the block size for the new matrix 70ff585edeSJed Brown 71ff585edeSJed Brown Output Parameter: 72ff585edeSJed Brown . B - the new MAIJ matrix 73ff585edeSJed Brown 74ff585edeSJed Brown Level: advanced 75ff585edeSJed Brown 76ff585edeSJed Brown .seealso: MatCreateMAIJ() 77ff585edeSJed Brown @*/ 787087cfbeSBarry Smith PetscErrorCode MatMAIJRedimension(Mat A,PetscInt dof,Mat *B) 79b9b97703SBarry Smith { 80dfbe8321SBarry Smith PetscErrorCode ierr; 810298fd71SBarry Smith Mat Aij = NULL; 82b9b97703SBarry Smith 83b9b97703SBarry Smith PetscFunctionBegin; 84c5eb9154SBarry Smith PetscValidLogicalCollectiveInt(A,dof,2); 85b9b97703SBarry Smith ierr = MatMAIJGetAIJ(A,&Aij);CHKERRQ(ierr); 86b9b97703SBarry Smith ierr = MatCreateMAIJ(Aij,dof,B);CHKERRQ(ierr); 87b9b97703SBarry Smith PetscFunctionReturn(0); 88b9b97703SBarry Smith } 89b9b97703SBarry Smith 90dfbe8321SBarry Smith PetscErrorCode MatDestroy_SeqMAIJ(Mat A) 9182b1193eSBarry Smith { 92dfbe8321SBarry Smith PetscErrorCode ierr; 934cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9482b1193eSBarry Smith 9582b1193eSBarry Smith PetscFunctionBegin; 966bf464f9SBarry Smith ierr = MatDestroy(&b->AIJ);CHKERRQ(ierr); 97bf0cc555SLisandro Dalcin ierr = PetscFree(A->data);CHKERRQ(ierr); 98bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_seqmaij_seqaij_C",NULL);CHKERRQ(ierr); 99bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaij_seqmaij_C",NULL);CHKERRQ(ierr); 10059e29146SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaijperm_seqmaij_C",NULL);CHKERRQ(ierr); 101279e4bd4SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaijmkl_seqmaij_C",NULL);CHKERRQ(ierr); 1024cb9d9b8SBarry Smith PetscFunctionReturn(0); 1034cb9d9b8SBarry Smith } 1044cb9d9b8SBarry Smith 105356c569eSBarry Smith PetscErrorCode MatSetUp_MAIJ(Mat A) 106356c569eSBarry Smith { 107356c569eSBarry Smith PetscFunctionBegin; 108ce94432eSBarry Smith SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Must use MatCreateMAIJ() to create MAIJ matrices"); 109356c569eSBarry Smith PetscFunctionReturn(0); 110356c569eSBarry Smith } 111356c569eSBarry Smith 1120fd73130SBarry Smith PetscErrorCode MatView_SeqMAIJ(Mat A,PetscViewer viewer) 1130fd73130SBarry Smith { 1140fd73130SBarry Smith PetscErrorCode ierr; 1150fd73130SBarry Smith Mat B; 1160fd73130SBarry Smith 1170fd73130SBarry Smith PetscFunctionBegin; 118a2ea699eSBarry Smith ierr = MatConvert(A,MATSEQAIJ,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr); 1190fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 1206bf464f9SBarry Smith ierr = MatDestroy(&B);CHKERRQ(ierr); 1210fd73130SBarry Smith PetscFunctionReturn(0); 1220fd73130SBarry Smith } 1230fd73130SBarry Smith 1240fd73130SBarry Smith PetscErrorCode MatView_MPIMAIJ(Mat A,PetscViewer viewer) 1250fd73130SBarry Smith { 1260fd73130SBarry Smith PetscErrorCode ierr; 1270fd73130SBarry Smith Mat B; 1280fd73130SBarry Smith 1290fd73130SBarry Smith PetscFunctionBegin; 130a2ea699eSBarry Smith ierr = MatConvert(A,MATMPIAIJ,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr); 1310fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 1326bf464f9SBarry Smith ierr = MatDestroy(&B);CHKERRQ(ierr); 1330fd73130SBarry Smith PetscFunctionReturn(0); 1340fd73130SBarry Smith } 1350fd73130SBarry Smith 136dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIMAIJ(Mat A) 1374cb9d9b8SBarry Smith { 138dfbe8321SBarry Smith PetscErrorCode ierr; 1394cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1404cb9d9b8SBarry Smith 1414cb9d9b8SBarry Smith PetscFunctionBegin; 1426bf464f9SBarry Smith ierr = MatDestroy(&b->AIJ);CHKERRQ(ierr); 1436bf464f9SBarry Smith ierr = MatDestroy(&b->OAIJ);CHKERRQ(ierr); 1446bf464f9SBarry Smith ierr = MatDestroy(&b->A);CHKERRQ(ierr); 1456bf464f9SBarry Smith ierr = VecScatterDestroy(&b->ctx);CHKERRQ(ierr); 1466bf464f9SBarry Smith ierr = VecDestroy(&b->w);CHKERRQ(ierr); 147bf0cc555SLisandro Dalcin ierr = PetscFree(A->data);CHKERRQ(ierr); 148bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_mpimaij_mpiaij_C",NULL);CHKERRQ(ierr); 149bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_mpiaij_mpimaij_C",NULL);CHKERRQ(ierr); 150dbd8c25aSHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,0);CHKERRQ(ierr); 151b9b97703SBarry Smith PetscFunctionReturn(0); 152b9b97703SBarry Smith } 153b9b97703SBarry Smith 1540bad9183SKris Buschelman /*MC 155fafad747SKris Buschelman MATMAIJ - MATMAIJ = "maij" - A matrix type to be used for restriction and interpolation operations for 1560bad9183SKris Buschelman multicomponent problems, interpolating or restricting each component the same way independently. 1570bad9183SKris Buschelman The matrix type is based on MATSEQAIJ for sequential matrices, and MATMPIAIJ for distributed matrices. 1580bad9183SKris Buschelman 1590bad9183SKris Buschelman Operations provided: 1600bad9183SKris Buschelman . MatMult 1610bad9183SKris Buschelman . MatMultTranspose 1620bad9183SKris Buschelman . MatMultAdd 1630bad9183SKris Buschelman . MatMultTransposeAdd 1640bad9183SKris Buschelman 1650bad9183SKris Buschelman Level: advanced 1660bad9183SKris Buschelman 167b409243cSBarry Smith .seealso: MatMAIJGetAIJ(), MatMAIJRedimension(), MatCreateMAIJ() 1680bad9183SKris Buschelman M*/ 1690bad9183SKris Buschelman 1708cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MAIJ(Mat A) 17182b1193eSBarry Smith { 172dfbe8321SBarry Smith PetscErrorCode ierr; 1734cb9d9b8SBarry Smith Mat_MPIMAIJ *b; 17464b52464SHong Zhang PetscMPIInt size; 17582b1193eSBarry Smith 17682b1193eSBarry Smith PetscFunctionBegin; 177b00a9115SJed Brown ierr = PetscNewLog(A,&b);CHKERRQ(ierr); 178b0a32e0cSBarry Smith A->data = (void*)b; 17926fbe8dcSKarl Rupp 180cd3bbe55SBarry Smith ierr = PetscMemzero(A->ops,sizeof(struct _MatOps));CHKERRQ(ierr); 18126fbe8dcSKarl Rupp 182356c569eSBarry Smith A->ops->setup = MatSetUp_MAIJ; 183f4a53059SBarry Smith 184cd3bbe55SBarry Smith b->AIJ = 0; 185cd3bbe55SBarry Smith b->dof = 0; 186f4a53059SBarry Smith b->OAIJ = 0; 187f4a53059SBarry Smith b->ctx = 0; 188f4a53059SBarry Smith b->w = 0; 189ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 19064b52464SHong Zhang if (size == 1) { 19164b52464SHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,MATSEQMAIJ);CHKERRQ(ierr); 19264b52464SHong Zhang } else { 19364b52464SHong Zhang ierr = PetscObjectChangeTypeName((PetscObject)A,MATMPIMAIJ);CHKERRQ(ierr); 19464b52464SHong Zhang } 19532e7c8b0SBarry Smith A->preallocated = PETSC_TRUE; 19632e7c8b0SBarry Smith A->assembled = PETSC_TRUE; 19782b1193eSBarry Smith PetscFunctionReturn(0); 19882b1193eSBarry Smith } 19982b1193eSBarry Smith 200cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 201dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 20282b1193eSBarry Smith { 2034cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 204bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 205d2840e09SBarry Smith const PetscScalar *x,*v; 206d2840e09SBarry Smith PetscScalar *y, sum1, sum2; 207dfbe8321SBarry Smith PetscErrorCode ierr; 208d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 209d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 21082b1193eSBarry Smith 211bcc973b7SBarry Smith PetscFunctionBegin; 2123649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2131ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 214bcc973b7SBarry Smith idx = a->j; 215bcc973b7SBarry Smith v = a->a; 216bcc973b7SBarry Smith ii = a->i; 217bcc973b7SBarry Smith 218bcc973b7SBarry Smith for (i=0; i<m; i++) { 219bcc973b7SBarry Smith jrow = ii[i]; 220bcc973b7SBarry Smith n = ii[i+1] - jrow; 221bcc973b7SBarry Smith sum1 = 0.0; 222bcc973b7SBarry Smith sum2 = 0.0; 22326fbe8dcSKarl Rupp 224b3c51c66SMatthew Knepley nonzerorow += (n>0); 225bcc973b7SBarry Smith for (j=0; j<n; j++) { 226bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 227bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 228bcc973b7SBarry Smith jrow++; 229bcc973b7SBarry Smith } 230bcc973b7SBarry Smith y[2*i] = sum1; 231bcc973b7SBarry Smith y[2*i+1] = sum2; 232bcc973b7SBarry Smith } 233bcc973b7SBarry Smith 234dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz - 2.0*nonzerorow);CHKERRQ(ierr); 2353649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2361ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 23782b1193eSBarry Smith PetscFunctionReturn(0); 23882b1193eSBarry Smith } 239bcc973b7SBarry Smith 240dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 24182b1193eSBarry Smith { 2424cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 243bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 244d2840e09SBarry Smith const PetscScalar *x,*v; 245d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2; 246dfbe8321SBarry Smith PetscErrorCode ierr; 247d2840e09SBarry Smith PetscInt n,i; 248d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 24982b1193eSBarry Smith 250bcc973b7SBarry Smith PetscFunctionBegin; 251d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 2523649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2531ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 254bfec09a0SHong Zhang 255bcc973b7SBarry Smith for (i=0; i<m; i++) { 256bfec09a0SHong Zhang idx = a->j + a->i[i]; 257bfec09a0SHong Zhang v = a->a + a->i[i]; 258bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 259bcc973b7SBarry Smith alpha1 = x[2*i]; 260bcc973b7SBarry Smith alpha2 = x[2*i+1]; 26126fbe8dcSKarl Rupp while (n-->0) { 26226fbe8dcSKarl Rupp y[2*(*idx)] += alpha1*(*v); 26326fbe8dcSKarl Rupp y[2*(*idx)+1] += alpha2*(*v); 26426fbe8dcSKarl Rupp idx++; v++; 26526fbe8dcSKarl Rupp } 266bcc973b7SBarry Smith } 267dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 2683649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2691ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 27082b1193eSBarry Smith PetscFunctionReturn(0); 27182b1193eSBarry Smith } 272bcc973b7SBarry Smith 273dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 27482b1193eSBarry Smith { 2754cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 276bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 277d2840e09SBarry Smith const PetscScalar *x,*v; 278d2840e09SBarry Smith PetscScalar *y,sum1, sum2; 279dfbe8321SBarry Smith PetscErrorCode ierr; 280b24ad042SBarry Smith PetscInt n,i,jrow,j; 281d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 28282b1193eSBarry Smith 283bcc973b7SBarry Smith PetscFunctionBegin; 284f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 2853649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2861ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 287bcc973b7SBarry Smith idx = a->j; 288bcc973b7SBarry Smith v = a->a; 289bcc973b7SBarry Smith ii = a->i; 290bcc973b7SBarry Smith 291bcc973b7SBarry Smith for (i=0; i<m; i++) { 292bcc973b7SBarry Smith jrow = ii[i]; 293bcc973b7SBarry Smith n = ii[i+1] - jrow; 294bcc973b7SBarry Smith sum1 = 0.0; 295bcc973b7SBarry Smith sum2 = 0.0; 296bcc973b7SBarry Smith for (j=0; j<n; j++) { 297bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 298bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 299bcc973b7SBarry Smith jrow++; 300bcc973b7SBarry Smith } 301bcc973b7SBarry Smith y[2*i] += sum1; 302bcc973b7SBarry Smith y[2*i+1] += sum2; 303bcc973b7SBarry Smith } 304bcc973b7SBarry Smith 305dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 3063649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3071ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 308bcc973b7SBarry Smith PetscFunctionReturn(0); 30982b1193eSBarry Smith } 310dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 31182b1193eSBarry Smith { 3124cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 313bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 314d2840e09SBarry Smith const PetscScalar *x,*v; 315d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2; 316dfbe8321SBarry Smith PetscErrorCode ierr; 317d2840e09SBarry Smith PetscInt n,i; 318d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 31982b1193eSBarry Smith 320bcc973b7SBarry Smith PetscFunctionBegin; 321f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 3223649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3231ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 324bfec09a0SHong Zhang 325bcc973b7SBarry Smith for (i=0; i<m; i++) { 326bfec09a0SHong Zhang idx = a->j + a->i[i]; 327bfec09a0SHong Zhang v = a->a + a->i[i]; 328bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 329bcc973b7SBarry Smith alpha1 = x[2*i]; 330bcc973b7SBarry Smith alpha2 = x[2*i+1]; 33126fbe8dcSKarl Rupp while (n-->0) { 33226fbe8dcSKarl Rupp y[2*(*idx)] += alpha1*(*v); 33326fbe8dcSKarl Rupp y[2*(*idx)+1] += alpha2*(*v); 33426fbe8dcSKarl Rupp idx++; v++; 33526fbe8dcSKarl Rupp } 336bcc973b7SBarry Smith } 337dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 3383649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3391ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 340bcc973b7SBarry Smith PetscFunctionReturn(0); 34182b1193eSBarry Smith } 342cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 343dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 344bcc973b7SBarry Smith { 3454cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 346bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 347d2840e09SBarry Smith const PetscScalar *x,*v; 348d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3; 349dfbe8321SBarry Smith PetscErrorCode ierr; 350d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 351d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 35282b1193eSBarry Smith 353bcc973b7SBarry Smith PetscFunctionBegin; 3543649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3551ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 356bcc973b7SBarry Smith idx = a->j; 357bcc973b7SBarry Smith v = a->a; 358bcc973b7SBarry Smith ii = a->i; 359bcc973b7SBarry Smith 360bcc973b7SBarry Smith for (i=0; i<m; i++) { 361bcc973b7SBarry Smith jrow = ii[i]; 362bcc973b7SBarry Smith n = ii[i+1] - jrow; 363bcc973b7SBarry Smith sum1 = 0.0; 364bcc973b7SBarry Smith sum2 = 0.0; 365bcc973b7SBarry Smith sum3 = 0.0; 36626fbe8dcSKarl Rupp 367b3c51c66SMatthew Knepley nonzerorow += (n>0); 368bcc973b7SBarry Smith for (j=0; j<n; j++) { 369bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 370bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 371bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 372bcc973b7SBarry Smith jrow++; 373bcc973b7SBarry Smith } 374bcc973b7SBarry Smith y[3*i] = sum1; 375bcc973b7SBarry Smith y[3*i+1] = sum2; 376bcc973b7SBarry Smith y[3*i+2] = sum3; 377bcc973b7SBarry Smith } 378bcc973b7SBarry Smith 379dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz - 3.0*nonzerorow);CHKERRQ(ierr); 3803649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3811ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 382bcc973b7SBarry Smith PetscFunctionReturn(0); 383bcc973b7SBarry Smith } 384bcc973b7SBarry Smith 385dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 386bcc973b7SBarry Smith { 3874cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 388bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 389d2840e09SBarry Smith const PetscScalar *x,*v; 390d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3; 391dfbe8321SBarry Smith PetscErrorCode ierr; 392d2840e09SBarry Smith PetscInt n,i; 393d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 394bcc973b7SBarry Smith 395bcc973b7SBarry Smith PetscFunctionBegin; 396d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 3973649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3981ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 399bfec09a0SHong Zhang 400bcc973b7SBarry Smith for (i=0; i<m; i++) { 401bfec09a0SHong Zhang idx = a->j + a->i[i]; 402bfec09a0SHong Zhang v = a->a + a->i[i]; 403bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 404bcc973b7SBarry Smith alpha1 = x[3*i]; 405bcc973b7SBarry Smith alpha2 = x[3*i+1]; 406bcc973b7SBarry Smith alpha3 = x[3*i+2]; 407bcc973b7SBarry Smith while (n-->0) { 408bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 409bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 410bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 411bcc973b7SBarry Smith idx++; v++; 412bcc973b7SBarry Smith } 413bcc973b7SBarry Smith } 414dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz);CHKERRQ(ierr); 4153649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 4161ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 417bcc973b7SBarry Smith PetscFunctionReturn(0); 418bcc973b7SBarry Smith } 419bcc973b7SBarry Smith 420dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 421bcc973b7SBarry Smith { 4224cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 423bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 424d2840e09SBarry Smith const PetscScalar *x,*v; 425d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3; 426dfbe8321SBarry Smith PetscErrorCode ierr; 427b24ad042SBarry Smith PetscInt n,i,jrow,j; 428d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 429bcc973b7SBarry Smith 430bcc973b7SBarry Smith PetscFunctionBegin; 431f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 4323649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 4331ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 434bcc973b7SBarry Smith idx = a->j; 435bcc973b7SBarry Smith v = a->a; 436bcc973b7SBarry Smith ii = a->i; 437bcc973b7SBarry Smith 438bcc973b7SBarry Smith for (i=0; i<m; i++) { 439bcc973b7SBarry Smith jrow = ii[i]; 440bcc973b7SBarry Smith n = ii[i+1] - jrow; 441bcc973b7SBarry Smith sum1 = 0.0; 442bcc973b7SBarry Smith sum2 = 0.0; 443bcc973b7SBarry Smith sum3 = 0.0; 444bcc973b7SBarry Smith for (j=0; j<n; j++) { 445bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 446bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 447bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 448bcc973b7SBarry Smith jrow++; 449bcc973b7SBarry Smith } 450bcc973b7SBarry Smith y[3*i] += sum1; 451bcc973b7SBarry Smith y[3*i+1] += sum2; 452bcc973b7SBarry Smith y[3*i+2] += sum3; 453bcc973b7SBarry Smith } 454bcc973b7SBarry Smith 455dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz);CHKERRQ(ierr); 4563649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 4571ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 458bcc973b7SBarry Smith PetscFunctionReturn(0); 459bcc973b7SBarry Smith } 460dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 461bcc973b7SBarry Smith { 4624cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 463bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 464d2840e09SBarry Smith const PetscScalar *x,*v; 465d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3; 466dfbe8321SBarry Smith PetscErrorCode ierr; 467d2840e09SBarry Smith PetscInt n,i; 468d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 469bcc973b7SBarry Smith 470bcc973b7SBarry Smith PetscFunctionBegin; 471f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 4723649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 4731ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 474bcc973b7SBarry Smith for (i=0; i<m; i++) { 475bfec09a0SHong Zhang idx = a->j + a->i[i]; 476bfec09a0SHong Zhang v = a->a + a->i[i]; 477bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 478bcc973b7SBarry Smith alpha1 = x[3*i]; 479bcc973b7SBarry Smith alpha2 = x[3*i+1]; 480bcc973b7SBarry Smith alpha3 = x[3*i+2]; 481bcc973b7SBarry Smith while (n-->0) { 482bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 483bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 484bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 485bcc973b7SBarry Smith idx++; v++; 486bcc973b7SBarry Smith } 487bcc973b7SBarry Smith } 488dc0b31edSSatish Balay ierr = PetscLogFlops(6.0*a->nz);CHKERRQ(ierr); 4893649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 4901ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 491bcc973b7SBarry Smith PetscFunctionReturn(0); 492bcc973b7SBarry Smith } 493bcc973b7SBarry Smith 494bcc973b7SBarry Smith /* ------------------------------------------------------------------------------*/ 495dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 496bcc973b7SBarry Smith { 4974cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 498bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 499d2840e09SBarry Smith const PetscScalar *x,*v; 500d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4; 501dfbe8321SBarry Smith PetscErrorCode ierr; 502d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 503d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 504bcc973b7SBarry Smith 505bcc973b7SBarry Smith PetscFunctionBegin; 5063649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5071ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 508bcc973b7SBarry Smith idx = a->j; 509bcc973b7SBarry Smith v = a->a; 510bcc973b7SBarry Smith ii = a->i; 511bcc973b7SBarry Smith 512bcc973b7SBarry Smith for (i=0; i<m; i++) { 513bcc973b7SBarry Smith jrow = ii[i]; 514bcc973b7SBarry Smith n = ii[i+1] - jrow; 515bcc973b7SBarry Smith sum1 = 0.0; 516bcc973b7SBarry Smith sum2 = 0.0; 517bcc973b7SBarry Smith sum3 = 0.0; 518bcc973b7SBarry Smith sum4 = 0.0; 519b3c51c66SMatthew Knepley nonzerorow += (n>0); 520bcc973b7SBarry Smith for (j=0; j<n; j++) { 521bcc973b7SBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 522bcc973b7SBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 523bcc973b7SBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 524bcc973b7SBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 525bcc973b7SBarry Smith jrow++; 526bcc973b7SBarry Smith } 527bcc973b7SBarry Smith y[4*i] = sum1; 528bcc973b7SBarry Smith y[4*i+1] = sum2; 529bcc973b7SBarry Smith y[4*i+2] = sum3; 530bcc973b7SBarry Smith y[4*i+3] = sum4; 531bcc973b7SBarry Smith } 532bcc973b7SBarry Smith 533dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz - 4.0*nonzerorow);CHKERRQ(ierr); 5343649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 5351ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 536bcc973b7SBarry Smith PetscFunctionReturn(0); 537bcc973b7SBarry Smith } 538bcc973b7SBarry Smith 539dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 540bcc973b7SBarry Smith { 5414cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 542bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 543d2840e09SBarry Smith const PetscScalar *x,*v; 544d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4; 545dfbe8321SBarry Smith PetscErrorCode ierr; 546d2840e09SBarry Smith PetscInt n,i; 547d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 548bcc973b7SBarry Smith 549bcc973b7SBarry Smith PetscFunctionBegin; 550d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 5513649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5521ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 553bcc973b7SBarry Smith for (i=0; i<m; i++) { 554bfec09a0SHong Zhang idx = a->j + a->i[i]; 555bfec09a0SHong Zhang v = a->a + a->i[i]; 556bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 557bcc973b7SBarry Smith alpha1 = x[4*i]; 558bcc973b7SBarry Smith alpha2 = x[4*i+1]; 559bcc973b7SBarry Smith alpha3 = x[4*i+2]; 560bcc973b7SBarry Smith alpha4 = x[4*i+3]; 561bcc973b7SBarry Smith while (n-->0) { 562bcc973b7SBarry Smith y[4*(*idx)] += alpha1*(*v); 563bcc973b7SBarry Smith y[4*(*idx)+1] += alpha2*(*v); 564bcc973b7SBarry Smith y[4*(*idx)+2] += alpha3*(*v); 565bcc973b7SBarry Smith y[4*(*idx)+3] += alpha4*(*v); 566bcc973b7SBarry Smith idx++; v++; 567bcc973b7SBarry Smith } 568bcc973b7SBarry Smith } 569dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz);CHKERRQ(ierr); 5703649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 5711ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 572bcc973b7SBarry Smith PetscFunctionReturn(0); 573bcc973b7SBarry Smith } 574bcc973b7SBarry Smith 575dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 576bcc973b7SBarry Smith { 5774cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 578f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 579d2840e09SBarry Smith const PetscScalar *x,*v; 580d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4; 581dfbe8321SBarry Smith PetscErrorCode ierr; 582b24ad042SBarry Smith PetscInt n,i,jrow,j; 583d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 584f9fae5adSBarry Smith 585f9fae5adSBarry Smith PetscFunctionBegin; 586f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 5873649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5881ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 589f9fae5adSBarry Smith idx = a->j; 590f9fae5adSBarry Smith v = a->a; 591f9fae5adSBarry Smith ii = a->i; 592f9fae5adSBarry Smith 593f9fae5adSBarry Smith for (i=0; i<m; i++) { 594f9fae5adSBarry Smith jrow = ii[i]; 595f9fae5adSBarry Smith n = ii[i+1] - jrow; 596f9fae5adSBarry Smith sum1 = 0.0; 597f9fae5adSBarry Smith sum2 = 0.0; 598f9fae5adSBarry Smith sum3 = 0.0; 599f9fae5adSBarry Smith sum4 = 0.0; 600f9fae5adSBarry Smith for (j=0; j<n; j++) { 601f9fae5adSBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 602f9fae5adSBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 603f9fae5adSBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 604f9fae5adSBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 605f9fae5adSBarry Smith jrow++; 606f9fae5adSBarry Smith } 607f9fae5adSBarry Smith y[4*i] += sum1; 608f9fae5adSBarry Smith y[4*i+1] += sum2; 609f9fae5adSBarry Smith y[4*i+2] += sum3; 610f9fae5adSBarry Smith y[4*i+3] += sum4; 611f9fae5adSBarry Smith } 612f9fae5adSBarry Smith 613dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz);CHKERRQ(ierr); 6143649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 6151ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 616f9fae5adSBarry Smith PetscFunctionReturn(0); 617bcc973b7SBarry Smith } 618dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 619bcc973b7SBarry Smith { 6204cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 621f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 622d2840e09SBarry Smith const PetscScalar *x,*v; 623d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4; 624dfbe8321SBarry Smith PetscErrorCode ierr; 625d2840e09SBarry Smith PetscInt n,i; 626d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 627f9fae5adSBarry Smith 628f9fae5adSBarry Smith PetscFunctionBegin; 629f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 6303649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 6311ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 632bfec09a0SHong Zhang 633f9fae5adSBarry Smith for (i=0; i<m; i++) { 634bfec09a0SHong Zhang idx = a->j + a->i[i]; 635bfec09a0SHong Zhang v = a->a + a->i[i]; 636f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 637f9fae5adSBarry Smith alpha1 = x[4*i]; 638f9fae5adSBarry Smith alpha2 = x[4*i+1]; 639f9fae5adSBarry Smith alpha3 = x[4*i+2]; 640f9fae5adSBarry Smith alpha4 = x[4*i+3]; 641f9fae5adSBarry Smith while (n-->0) { 642f9fae5adSBarry Smith y[4*(*idx)] += alpha1*(*v); 643f9fae5adSBarry Smith y[4*(*idx)+1] += alpha2*(*v); 644f9fae5adSBarry Smith y[4*(*idx)+2] += alpha3*(*v); 645f9fae5adSBarry Smith y[4*(*idx)+3] += alpha4*(*v); 646f9fae5adSBarry Smith idx++; v++; 647f9fae5adSBarry Smith } 648f9fae5adSBarry Smith } 649dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz);CHKERRQ(ierr); 6503649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 6511ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 652f9fae5adSBarry Smith PetscFunctionReturn(0); 653f9fae5adSBarry Smith } 654f9fae5adSBarry Smith /* ------------------------------------------------------------------------------*/ 6556cd98798SBarry Smith 656dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 657f9fae5adSBarry Smith { 6584cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 659f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 660d2840e09SBarry Smith const PetscScalar *x,*v; 661d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5; 662dfbe8321SBarry Smith PetscErrorCode ierr; 663d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 664d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 665f9fae5adSBarry Smith 666f9fae5adSBarry Smith PetscFunctionBegin; 6673649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 6681ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 669f9fae5adSBarry Smith idx = a->j; 670f9fae5adSBarry Smith v = a->a; 671f9fae5adSBarry Smith ii = a->i; 672f9fae5adSBarry Smith 673f9fae5adSBarry Smith for (i=0; i<m; i++) { 674f9fae5adSBarry Smith jrow = ii[i]; 675f9fae5adSBarry Smith n = ii[i+1] - jrow; 676f9fae5adSBarry Smith sum1 = 0.0; 677f9fae5adSBarry Smith sum2 = 0.0; 678f9fae5adSBarry Smith sum3 = 0.0; 679f9fae5adSBarry Smith sum4 = 0.0; 680f9fae5adSBarry Smith sum5 = 0.0; 68126fbe8dcSKarl Rupp 682b3c51c66SMatthew Knepley nonzerorow += (n>0); 683f9fae5adSBarry Smith for (j=0; j<n; j++) { 684f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 685f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 686f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 687f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 688f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 689f9fae5adSBarry Smith jrow++; 690f9fae5adSBarry Smith } 691f9fae5adSBarry Smith y[5*i] = sum1; 692f9fae5adSBarry Smith y[5*i+1] = sum2; 693f9fae5adSBarry Smith y[5*i+2] = sum3; 694f9fae5adSBarry Smith y[5*i+3] = sum4; 695f9fae5adSBarry Smith y[5*i+4] = sum5; 696f9fae5adSBarry Smith } 697f9fae5adSBarry Smith 698dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz - 5.0*nonzerorow);CHKERRQ(ierr); 6993649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 7001ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 701f9fae5adSBarry Smith PetscFunctionReturn(0); 702f9fae5adSBarry Smith } 703f9fae5adSBarry Smith 704dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 705f9fae5adSBarry Smith { 7064cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 707f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 708d2840e09SBarry Smith const PetscScalar *x,*v; 709d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5; 710dfbe8321SBarry Smith PetscErrorCode ierr; 711d2840e09SBarry Smith PetscInt n,i; 712d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 713f9fae5adSBarry Smith 714f9fae5adSBarry Smith PetscFunctionBegin; 715d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 7163649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 7171ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 718bfec09a0SHong Zhang 719f9fae5adSBarry Smith for (i=0; i<m; i++) { 720bfec09a0SHong Zhang idx = a->j + a->i[i]; 721bfec09a0SHong Zhang v = a->a + a->i[i]; 722f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 723f9fae5adSBarry Smith alpha1 = x[5*i]; 724f9fae5adSBarry Smith alpha2 = x[5*i+1]; 725f9fae5adSBarry Smith alpha3 = x[5*i+2]; 726f9fae5adSBarry Smith alpha4 = x[5*i+3]; 727f9fae5adSBarry Smith alpha5 = x[5*i+4]; 728f9fae5adSBarry Smith while (n-->0) { 729f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 730f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 731f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 732f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 733f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 734f9fae5adSBarry Smith idx++; v++; 735f9fae5adSBarry Smith } 736f9fae5adSBarry Smith } 737dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz);CHKERRQ(ierr); 7383649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 7391ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 740f9fae5adSBarry Smith PetscFunctionReturn(0); 741f9fae5adSBarry Smith } 742f9fae5adSBarry Smith 743dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 744f9fae5adSBarry Smith { 7454cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 746f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 747d2840e09SBarry Smith const PetscScalar *x,*v; 748d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5; 749dfbe8321SBarry Smith PetscErrorCode ierr; 750b24ad042SBarry Smith PetscInt n,i,jrow,j; 751d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 752f9fae5adSBarry Smith 753f9fae5adSBarry Smith PetscFunctionBegin; 754f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 7553649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 7561ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 757f9fae5adSBarry Smith idx = a->j; 758f9fae5adSBarry Smith v = a->a; 759f9fae5adSBarry Smith ii = a->i; 760f9fae5adSBarry Smith 761f9fae5adSBarry Smith for (i=0; i<m; i++) { 762f9fae5adSBarry Smith jrow = ii[i]; 763f9fae5adSBarry Smith n = ii[i+1] - jrow; 764f9fae5adSBarry Smith sum1 = 0.0; 765f9fae5adSBarry Smith sum2 = 0.0; 766f9fae5adSBarry Smith sum3 = 0.0; 767f9fae5adSBarry Smith sum4 = 0.0; 768f9fae5adSBarry Smith sum5 = 0.0; 769f9fae5adSBarry Smith for (j=0; j<n; j++) { 770f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 771f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 772f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 773f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 774f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 775f9fae5adSBarry Smith jrow++; 776f9fae5adSBarry Smith } 777f9fae5adSBarry Smith y[5*i] += sum1; 778f9fae5adSBarry Smith y[5*i+1] += sum2; 779f9fae5adSBarry Smith y[5*i+2] += sum3; 780f9fae5adSBarry Smith y[5*i+3] += sum4; 781f9fae5adSBarry Smith y[5*i+4] += sum5; 782f9fae5adSBarry Smith } 783f9fae5adSBarry Smith 784dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz);CHKERRQ(ierr); 7853649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 7861ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 787f9fae5adSBarry Smith PetscFunctionReturn(0); 788f9fae5adSBarry Smith } 789f9fae5adSBarry Smith 790dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 791f9fae5adSBarry Smith { 7924cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 793f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 794d2840e09SBarry Smith const PetscScalar *x,*v; 795d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5; 796dfbe8321SBarry Smith PetscErrorCode ierr; 797d2840e09SBarry Smith PetscInt n,i; 798d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 799f9fae5adSBarry Smith 800f9fae5adSBarry Smith PetscFunctionBegin; 801f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 8023649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8031ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 804bfec09a0SHong Zhang 805f9fae5adSBarry Smith for (i=0; i<m; i++) { 806bfec09a0SHong Zhang idx = a->j + a->i[i]; 807bfec09a0SHong Zhang v = a->a + a->i[i]; 808f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 809f9fae5adSBarry Smith alpha1 = x[5*i]; 810f9fae5adSBarry Smith alpha2 = x[5*i+1]; 811f9fae5adSBarry Smith alpha3 = x[5*i+2]; 812f9fae5adSBarry Smith alpha4 = x[5*i+3]; 813f9fae5adSBarry Smith alpha5 = x[5*i+4]; 814f9fae5adSBarry Smith while (n-->0) { 815f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 816f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 817f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 818f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 819f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 820f9fae5adSBarry Smith idx++; v++; 821f9fae5adSBarry Smith } 822f9fae5adSBarry Smith } 823dc0b31edSSatish Balay ierr = PetscLogFlops(10.0*a->nz);CHKERRQ(ierr); 8243649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 8251ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 826f9fae5adSBarry Smith PetscFunctionReturn(0); 827bcc973b7SBarry Smith } 828bcc973b7SBarry Smith 8296cd98798SBarry Smith /* ------------------------------------------------------------------------------*/ 830dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 8316cd98798SBarry Smith { 8326cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8336cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 834d2840e09SBarry Smith const PetscScalar *x,*v; 835d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6; 836dfbe8321SBarry Smith PetscErrorCode ierr; 837d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 838d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 8396cd98798SBarry Smith 8406cd98798SBarry Smith PetscFunctionBegin; 8413649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8421ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 8436cd98798SBarry Smith idx = a->j; 8446cd98798SBarry Smith v = a->a; 8456cd98798SBarry Smith ii = a->i; 8466cd98798SBarry Smith 8476cd98798SBarry Smith for (i=0; i<m; i++) { 8486cd98798SBarry Smith jrow = ii[i]; 8496cd98798SBarry Smith n = ii[i+1] - jrow; 8506cd98798SBarry Smith sum1 = 0.0; 8516cd98798SBarry Smith sum2 = 0.0; 8526cd98798SBarry Smith sum3 = 0.0; 8536cd98798SBarry Smith sum4 = 0.0; 8546cd98798SBarry Smith sum5 = 0.0; 8556cd98798SBarry Smith sum6 = 0.0; 85626fbe8dcSKarl Rupp 857b3c51c66SMatthew Knepley nonzerorow += (n>0); 8586cd98798SBarry Smith for (j=0; j<n; j++) { 8596cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 8606cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 8616cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 8626cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 8636cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 8646cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 8656cd98798SBarry Smith jrow++; 8666cd98798SBarry Smith } 8676cd98798SBarry Smith y[6*i] = sum1; 8686cd98798SBarry Smith y[6*i+1] = sum2; 8696cd98798SBarry Smith y[6*i+2] = sum3; 8706cd98798SBarry Smith y[6*i+3] = sum4; 8716cd98798SBarry Smith y[6*i+4] = sum5; 8726cd98798SBarry Smith y[6*i+5] = sum6; 8736cd98798SBarry Smith } 8746cd98798SBarry Smith 875dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz - 6.0*nonzerorow);CHKERRQ(ierr); 8763649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 8771ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 8786cd98798SBarry Smith PetscFunctionReturn(0); 8796cd98798SBarry Smith } 8806cd98798SBarry Smith 881dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 8826cd98798SBarry Smith { 8836cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8846cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 885d2840e09SBarry Smith const PetscScalar *x,*v; 886d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6; 887dfbe8321SBarry Smith PetscErrorCode ierr; 888d2840e09SBarry Smith PetscInt n,i; 889d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 8906cd98798SBarry Smith 8916cd98798SBarry Smith PetscFunctionBegin; 892d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 8933649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8941ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 895bfec09a0SHong Zhang 8966cd98798SBarry Smith for (i=0; i<m; i++) { 897bfec09a0SHong Zhang idx = a->j + a->i[i]; 898bfec09a0SHong Zhang v = a->a + a->i[i]; 8996cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 9006cd98798SBarry Smith alpha1 = x[6*i]; 9016cd98798SBarry Smith alpha2 = x[6*i+1]; 9026cd98798SBarry Smith alpha3 = x[6*i+2]; 9036cd98798SBarry Smith alpha4 = x[6*i+3]; 9046cd98798SBarry Smith alpha5 = x[6*i+4]; 9056cd98798SBarry Smith alpha6 = x[6*i+5]; 9066cd98798SBarry Smith while (n-->0) { 9076cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 9086cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 9096cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 9106cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 9116cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 9126cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 9136cd98798SBarry Smith idx++; v++; 9146cd98798SBarry Smith } 9156cd98798SBarry Smith } 916dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz);CHKERRQ(ierr); 9173649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 9181ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 9196cd98798SBarry Smith PetscFunctionReturn(0); 9206cd98798SBarry Smith } 9216cd98798SBarry Smith 922dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 9236cd98798SBarry Smith { 9246cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9256cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 926d2840e09SBarry Smith const PetscScalar *x,*v; 927d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6; 928dfbe8321SBarry Smith PetscErrorCode ierr; 929b24ad042SBarry Smith PetscInt n,i,jrow,j; 930d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 9316cd98798SBarry Smith 9326cd98798SBarry Smith PetscFunctionBegin; 9336cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 9343649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 9351ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 9366cd98798SBarry Smith idx = a->j; 9376cd98798SBarry Smith v = a->a; 9386cd98798SBarry Smith ii = a->i; 9396cd98798SBarry Smith 9406cd98798SBarry Smith for (i=0; i<m; i++) { 9416cd98798SBarry Smith jrow = ii[i]; 9426cd98798SBarry Smith n = ii[i+1] - jrow; 9436cd98798SBarry Smith sum1 = 0.0; 9446cd98798SBarry Smith sum2 = 0.0; 9456cd98798SBarry Smith sum3 = 0.0; 9466cd98798SBarry Smith sum4 = 0.0; 9476cd98798SBarry Smith sum5 = 0.0; 9486cd98798SBarry Smith sum6 = 0.0; 9496cd98798SBarry Smith for (j=0; j<n; j++) { 9506cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 9516cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 9526cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 9536cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 9546cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 9556cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 9566cd98798SBarry Smith jrow++; 9576cd98798SBarry Smith } 9586cd98798SBarry Smith y[6*i] += sum1; 9596cd98798SBarry Smith y[6*i+1] += sum2; 9606cd98798SBarry Smith y[6*i+2] += sum3; 9616cd98798SBarry Smith y[6*i+3] += sum4; 9626cd98798SBarry Smith y[6*i+4] += sum5; 9636cd98798SBarry Smith y[6*i+5] += sum6; 9646cd98798SBarry Smith } 9656cd98798SBarry Smith 966dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz);CHKERRQ(ierr); 9673649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 9681ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 9696cd98798SBarry Smith PetscFunctionReturn(0); 9706cd98798SBarry Smith } 9716cd98798SBarry Smith 972dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 9736cd98798SBarry Smith { 9746cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9756cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 976d2840e09SBarry Smith const PetscScalar *x,*v; 977d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6; 978dfbe8321SBarry Smith PetscErrorCode ierr; 979d2840e09SBarry Smith PetscInt n,i; 980d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 9816cd98798SBarry Smith 9826cd98798SBarry Smith PetscFunctionBegin; 9836cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 9843649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 9851ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 986bfec09a0SHong Zhang 9876cd98798SBarry Smith for (i=0; i<m; i++) { 988bfec09a0SHong Zhang idx = a->j + a->i[i]; 989bfec09a0SHong Zhang v = a->a + a->i[i]; 9906cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 9916cd98798SBarry Smith alpha1 = x[6*i]; 9926cd98798SBarry Smith alpha2 = x[6*i+1]; 9936cd98798SBarry Smith alpha3 = x[6*i+2]; 9946cd98798SBarry Smith alpha4 = x[6*i+3]; 9956cd98798SBarry Smith alpha5 = x[6*i+4]; 9966cd98798SBarry Smith alpha6 = x[6*i+5]; 9976cd98798SBarry Smith while (n-->0) { 9986cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 9996cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 10006cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 10016cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 10026cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 10036cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 10046cd98798SBarry Smith idx++; v++; 10056cd98798SBarry Smith } 10066cd98798SBarry Smith } 1007dc0b31edSSatish Balay ierr = PetscLogFlops(12.0*a->nz);CHKERRQ(ierr); 10083649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 10091ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 10106cd98798SBarry Smith PetscFunctionReturn(0); 10116cd98798SBarry Smith } 10126cd98798SBarry Smith 101366ed3db0SBarry Smith /* ------------------------------------------------------------------------------*/ 1014ed8eea03SBarry Smith PetscErrorCode MatMult_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 1015ed8eea03SBarry Smith { 1016ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1017ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1018d2840e09SBarry Smith const PetscScalar *x,*v; 1019d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 1020ed8eea03SBarry Smith PetscErrorCode ierr; 1021d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1022d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 1023ed8eea03SBarry Smith 1024ed8eea03SBarry Smith PetscFunctionBegin; 10253649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1026ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1027ed8eea03SBarry Smith idx = a->j; 1028ed8eea03SBarry Smith v = a->a; 1029ed8eea03SBarry Smith ii = a->i; 1030ed8eea03SBarry Smith 1031ed8eea03SBarry Smith for (i=0; i<m; i++) { 1032ed8eea03SBarry Smith jrow = ii[i]; 1033ed8eea03SBarry Smith n = ii[i+1] - jrow; 1034ed8eea03SBarry Smith sum1 = 0.0; 1035ed8eea03SBarry Smith sum2 = 0.0; 1036ed8eea03SBarry Smith sum3 = 0.0; 1037ed8eea03SBarry Smith sum4 = 0.0; 1038ed8eea03SBarry Smith sum5 = 0.0; 1039ed8eea03SBarry Smith sum6 = 0.0; 1040ed8eea03SBarry Smith sum7 = 0.0; 104126fbe8dcSKarl Rupp 1042b3c51c66SMatthew Knepley nonzerorow += (n>0); 1043ed8eea03SBarry Smith for (j=0; j<n; j++) { 1044ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1045ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1046ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1047ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1048ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1049ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1050ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1051ed8eea03SBarry Smith jrow++; 1052ed8eea03SBarry Smith } 1053ed8eea03SBarry Smith y[7*i] = sum1; 1054ed8eea03SBarry Smith y[7*i+1] = sum2; 1055ed8eea03SBarry Smith y[7*i+2] = sum3; 1056ed8eea03SBarry Smith y[7*i+3] = sum4; 1057ed8eea03SBarry Smith y[7*i+4] = sum5; 1058ed8eea03SBarry Smith y[7*i+5] = sum6; 1059ed8eea03SBarry Smith y[7*i+6] = sum7; 1060ed8eea03SBarry Smith } 1061ed8eea03SBarry Smith 1062dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz - 7.0*nonzerorow);CHKERRQ(ierr); 10633649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1064ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1065ed8eea03SBarry Smith PetscFunctionReturn(0); 1066ed8eea03SBarry Smith } 1067ed8eea03SBarry Smith 1068ed8eea03SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 1069ed8eea03SBarry Smith { 1070ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1071ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1072d2840e09SBarry Smith const PetscScalar *x,*v; 1073d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7; 1074ed8eea03SBarry Smith PetscErrorCode ierr; 1075d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1076d2840e09SBarry Smith PetscInt n,i; 1077ed8eea03SBarry Smith 1078ed8eea03SBarry Smith PetscFunctionBegin; 1079d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 10803649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1081ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1082ed8eea03SBarry Smith 1083ed8eea03SBarry Smith for (i=0; i<m; i++) { 1084ed8eea03SBarry Smith idx = a->j + a->i[i]; 1085ed8eea03SBarry Smith v = a->a + a->i[i]; 1086ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1087ed8eea03SBarry Smith alpha1 = x[7*i]; 1088ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1089ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1090ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1091ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1092ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1093ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1094ed8eea03SBarry Smith while (n-->0) { 1095ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1096ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1097ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1098ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1099ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1100ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1101ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1102ed8eea03SBarry Smith idx++; v++; 1103ed8eea03SBarry Smith } 1104ed8eea03SBarry Smith } 1105dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz);CHKERRQ(ierr); 11063649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1107ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1108ed8eea03SBarry Smith PetscFunctionReturn(0); 1109ed8eea03SBarry Smith } 1110ed8eea03SBarry Smith 1111ed8eea03SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1112ed8eea03SBarry Smith { 1113ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1114ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1115d2840e09SBarry Smith const PetscScalar *x,*v; 1116d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 1117ed8eea03SBarry Smith PetscErrorCode ierr; 1118d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1119ed8eea03SBarry Smith PetscInt n,i,jrow,j; 1120ed8eea03SBarry Smith 1121ed8eea03SBarry Smith PetscFunctionBegin; 1122ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 11233649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1124ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1125ed8eea03SBarry Smith idx = a->j; 1126ed8eea03SBarry Smith v = a->a; 1127ed8eea03SBarry Smith ii = a->i; 1128ed8eea03SBarry Smith 1129ed8eea03SBarry Smith for (i=0; i<m; i++) { 1130ed8eea03SBarry Smith jrow = ii[i]; 1131ed8eea03SBarry Smith n = ii[i+1] - jrow; 1132ed8eea03SBarry Smith sum1 = 0.0; 1133ed8eea03SBarry Smith sum2 = 0.0; 1134ed8eea03SBarry Smith sum3 = 0.0; 1135ed8eea03SBarry Smith sum4 = 0.0; 1136ed8eea03SBarry Smith sum5 = 0.0; 1137ed8eea03SBarry Smith sum6 = 0.0; 1138ed8eea03SBarry Smith sum7 = 0.0; 1139ed8eea03SBarry Smith for (j=0; j<n; j++) { 1140ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1141ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1142ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1143ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1144ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1145ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1146ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1147ed8eea03SBarry Smith jrow++; 1148ed8eea03SBarry Smith } 1149ed8eea03SBarry Smith y[7*i] += sum1; 1150ed8eea03SBarry Smith y[7*i+1] += sum2; 1151ed8eea03SBarry Smith y[7*i+2] += sum3; 1152ed8eea03SBarry Smith y[7*i+3] += sum4; 1153ed8eea03SBarry Smith y[7*i+4] += sum5; 1154ed8eea03SBarry Smith y[7*i+5] += sum6; 1155ed8eea03SBarry Smith y[7*i+6] += sum7; 1156ed8eea03SBarry Smith } 1157ed8eea03SBarry Smith 1158dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz);CHKERRQ(ierr); 11593649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1160ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1161ed8eea03SBarry Smith PetscFunctionReturn(0); 1162ed8eea03SBarry Smith } 1163ed8eea03SBarry Smith 1164ed8eea03SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1165ed8eea03SBarry Smith { 1166ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1167ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1168d2840e09SBarry Smith const PetscScalar *x,*v; 1169d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7; 1170ed8eea03SBarry Smith PetscErrorCode ierr; 1171d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1172d2840e09SBarry Smith PetscInt n,i; 1173ed8eea03SBarry Smith 1174ed8eea03SBarry Smith PetscFunctionBegin; 1175ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 11763649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1177ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1178ed8eea03SBarry Smith for (i=0; i<m; i++) { 1179ed8eea03SBarry Smith idx = a->j + a->i[i]; 1180ed8eea03SBarry Smith v = a->a + a->i[i]; 1181ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1182ed8eea03SBarry Smith alpha1 = x[7*i]; 1183ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1184ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1185ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1186ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1187ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1188ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1189ed8eea03SBarry Smith while (n-->0) { 1190ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1191ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1192ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1193ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1194ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1195ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1196ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1197ed8eea03SBarry Smith idx++; v++; 1198ed8eea03SBarry Smith } 1199ed8eea03SBarry Smith } 1200dc0b31edSSatish Balay ierr = PetscLogFlops(14.0*a->nz);CHKERRQ(ierr); 12013649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1202ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1203ed8eea03SBarry Smith PetscFunctionReturn(0); 1204ed8eea03SBarry Smith } 1205ed8eea03SBarry Smith 1206dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 120766ed3db0SBarry Smith { 120866ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 120966ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1210d2840e09SBarry Smith const PetscScalar *x,*v; 1211d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1212dfbe8321SBarry Smith PetscErrorCode ierr; 1213d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1214d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 121566ed3db0SBarry Smith 121666ed3db0SBarry Smith PetscFunctionBegin; 12173649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 12181ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 121966ed3db0SBarry Smith idx = a->j; 122066ed3db0SBarry Smith v = a->a; 122166ed3db0SBarry Smith ii = a->i; 122266ed3db0SBarry Smith 122366ed3db0SBarry Smith for (i=0; i<m; i++) { 122466ed3db0SBarry Smith jrow = ii[i]; 122566ed3db0SBarry Smith n = ii[i+1] - jrow; 122666ed3db0SBarry Smith sum1 = 0.0; 122766ed3db0SBarry Smith sum2 = 0.0; 122866ed3db0SBarry Smith sum3 = 0.0; 122966ed3db0SBarry Smith sum4 = 0.0; 123066ed3db0SBarry Smith sum5 = 0.0; 123166ed3db0SBarry Smith sum6 = 0.0; 123266ed3db0SBarry Smith sum7 = 0.0; 123366ed3db0SBarry Smith sum8 = 0.0; 123426fbe8dcSKarl Rupp 1235b3c51c66SMatthew Knepley nonzerorow += (n>0); 123666ed3db0SBarry Smith for (j=0; j<n; j++) { 123766ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 123866ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 123966ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 124066ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 124166ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 124266ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 124366ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 124466ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 124566ed3db0SBarry Smith jrow++; 124666ed3db0SBarry Smith } 124766ed3db0SBarry Smith y[8*i] = sum1; 124866ed3db0SBarry Smith y[8*i+1] = sum2; 124966ed3db0SBarry Smith y[8*i+2] = sum3; 125066ed3db0SBarry Smith y[8*i+3] = sum4; 125166ed3db0SBarry Smith y[8*i+4] = sum5; 125266ed3db0SBarry Smith y[8*i+5] = sum6; 125366ed3db0SBarry Smith y[8*i+6] = sum7; 125466ed3db0SBarry Smith y[8*i+7] = sum8; 125566ed3db0SBarry Smith } 125666ed3db0SBarry Smith 1257dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz - 8.0*nonzerorow);CHKERRQ(ierr); 12583649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 12591ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 126066ed3db0SBarry Smith PetscFunctionReturn(0); 126166ed3db0SBarry Smith } 126266ed3db0SBarry Smith 1263dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 126466ed3db0SBarry Smith { 126566ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 126666ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1267d2840e09SBarry Smith const PetscScalar *x,*v; 1268d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 1269dfbe8321SBarry Smith PetscErrorCode ierr; 1270d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1271d2840e09SBarry Smith PetscInt n,i; 127266ed3db0SBarry Smith 127366ed3db0SBarry Smith PetscFunctionBegin; 1274d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 12753649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 12761ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1277bfec09a0SHong Zhang 127866ed3db0SBarry Smith for (i=0; i<m; i++) { 1279bfec09a0SHong Zhang idx = a->j + a->i[i]; 1280bfec09a0SHong Zhang v = a->a + a->i[i]; 128166ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 128266ed3db0SBarry Smith alpha1 = x[8*i]; 128366ed3db0SBarry Smith alpha2 = x[8*i+1]; 128466ed3db0SBarry Smith alpha3 = x[8*i+2]; 128566ed3db0SBarry Smith alpha4 = x[8*i+3]; 128666ed3db0SBarry Smith alpha5 = x[8*i+4]; 128766ed3db0SBarry Smith alpha6 = x[8*i+5]; 128866ed3db0SBarry Smith alpha7 = x[8*i+6]; 128966ed3db0SBarry Smith alpha8 = x[8*i+7]; 129066ed3db0SBarry Smith while (n-->0) { 129166ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 129266ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 129366ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 129466ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 129566ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 129666ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 129766ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 129866ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 129966ed3db0SBarry Smith idx++; v++; 130066ed3db0SBarry Smith } 130166ed3db0SBarry Smith } 1302dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz);CHKERRQ(ierr); 13033649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 13041ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 130566ed3db0SBarry Smith PetscFunctionReturn(0); 130666ed3db0SBarry Smith } 130766ed3db0SBarry Smith 1308dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 130966ed3db0SBarry Smith { 131066ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 131166ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1312d2840e09SBarry Smith const PetscScalar *x,*v; 1313d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1314dfbe8321SBarry Smith PetscErrorCode ierr; 1315d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1316b24ad042SBarry Smith PetscInt n,i,jrow,j; 131766ed3db0SBarry Smith 131866ed3db0SBarry Smith PetscFunctionBegin; 131966ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 13203649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 13211ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 132266ed3db0SBarry Smith idx = a->j; 132366ed3db0SBarry Smith v = a->a; 132466ed3db0SBarry Smith ii = a->i; 132566ed3db0SBarry Smith 132666ed3db0SBarry Smith for (i=0; i<m; i++) { 132766ed3db0SBarry Smith jrow = ii[i]; 132866ed3db0SBarry Smith n = ii[i+1] - jrow; 132966ed3db0SBarry Smith sum1 = 0.0; 133066ed3db0SBarry Smith sum2 = 0.0; 133166ed3db0SBarry Smith sum3 = 0.0; 133266ed3db0SBarry Smith sum4 = 0.0; 133366ed3db0SBarry Smith sum5 = 0.0; 133466ed3db0SBarry Smith sum6 = 0.0; 133566ed3db0SBarry Smith sum7 = 0.0; 133666ed3db0SBarry Smith sum8 = 0.0; 133766ed3db0SBarry Smith for (j=0; j<n; j++) { 133866ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 133966ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 134066ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 134166ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 134266ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 134366ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 134466ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 134566ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 134666ed3db0SBarry Smith jrow++; 134766ed3db0SBarry Smith } 134866ed3db0SBarry Smith y[8*i] += sum1; 134966ed3db0SBarry Smith y[8*i+1] += sum2; 135066ed3db0SBarry Smith y[8*i+2] += sum3; 135166ed3db0SBarry Smith y[8*i+3] += sum4; 135266ed3db0SBarry Smith y[8*i+4] += sum5; 135366ed3db0SBarry Smith y[8*i+5] += sum6; 135466ed3db0SBarry Smith y[8*i+6] += sum7; 135566ed3db0SBarry Smith y[8*i+7] += sum8; 135666ed3db0SBarry Smith } 135766ed3db0SBarry Smith 1358dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz);CHKERRQ(ierr); 13593649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 13601ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 136166ed3db0SBarry Smith PetscFunctionReturn(0); 136266ed3db0SBarry Smith } 136366ed3db0SBarry Smith 1364dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 136566ed3db0SBarry Smith { 136666ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 136766ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1368d2840e09SBarry Smith const PetscScalar *x,*v; 1369d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 1370dfbe8321SBarry Smith PetscErrorCode ierr; 1371d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1372d2840e09SBarry Smith PetscInt n,i; 137366ed3db0SBarry Smith 137466ed3db0SBarry Smith PetscFunctionBegin; 137566ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 13763649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 13771ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 137866ed3db0SBarry Smith for (i=0; i<m; i++) { 1379bfec09a0SHong Zhang idx = a->j + a->i[i]; 1380bfec09a0SHong Zhang v = a->a + a->i[i]; 138166ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 138266ed3db0SBarry Smith alpha1 = x[8*i]; 138366ed3db0SBarry Smith alpha2 = x[8*i+1]; 138466ed3db0SBarry Smith alpha3 = x[8*i+2]; 138566ed3db0SBarry Smith alpha4 = x[8*i+3]; 138666ed3db0SBarry Smith alpha5 = x[8*i+4]; 138766ed3db0SBarry Smith alpha6 = x[8*i+5]; 138866ed3db0SBarry Smith alpha7 = x[8*i+6]; 138966ed3db0SBarry Smith alpha8 = x[8*i+7]; 139066ed3db0SBarry Smith while (n-->0) { 139166ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 139266ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 139366ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 139466ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 139566ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 139666ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 139766ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 139866ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 139966ed3db0SBarry Smith idx++; v++; 140066ed3db0SBarry Smith } 140166ed3db0SBarry Smith } 1402dc0b31edSSatish Balay ierr = PetscLogFlops(16.0*a->nz);CHKERRQ(ierr); 14033649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 14041ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 14052f7816d4SBarry Smith PetscFunctionReturn(0); 14062f7816d4SBarry Smith } 14072f7816d4SBarry Smith 14082b692628SMatthew Knepley /* ------------------------------------------------------------------------------*/ 1409dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 14102b692628SMatthew Knepley { 14112b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 14122b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1413d2840e09SBarry Smith const PetscScalar *x,*v; 1414d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1415dfbe8321SBarry Smith PetscErrorCode ierr; 1416d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1417d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 14182b692628SMatthew Knepley 14192b692628SMatthew Knepley PetscFunctionBegin; 14203649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 14211ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 14222b692628SMatthew Knepley idx = a->j; 14232b692628SMatthew Knepley v = a->a; 14242b692628SMatthew Knepley ii = a->i; 14252b692628SMatthew Knepley 14262b692628SMatthew Knepley for (i=0; i<m; i++) { 14272b692628SMatthew Knepley jrow = ii[i]; 14282b692628SMatthew Knepley n = ii[i+1] - jrow; 14292b692628SMatthew Knepley sum1 = 0.0; 14302b692628SMatthew Knepley sum2 = 0.0; 14312b692628SMatthew Knepley sum3 = 0.0; 14322b692628SMatthew Knepley sum4 = 0.0; 14332b692628SMatthew Knepley sum5 = 0.0; 14342b692628SMatthew Knepley sum6 = 0.0; 14352b692628SMatthew Knepley sum7 = 0.0; 14362b692628SMatthew Knepley sum8 = 0.0; 14372b692628SMatthew Knepley sum9 = 0.0; 143826fbe8dcSKarl Rupp 1439b3c51c66SMatthew Knepley nonzerorow += (n>0); 14402b692628SMatthew Knepley for (j=0; j<n; j++) { 14412b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 14422b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 14432b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 14442b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 14452b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 14462b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 14472b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 14482b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 14492b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 14502b692628SMatthew Knepley jrow++; 14512b692628SMatthew Knepley } 14522b692628SMatthew Knepley y[9*i] = sum1; 14532b692628SMatthew Knepley y[9*i+1] = sum2; 14542b692628SMatthew Knepley y[9*i+2] = sum3; 14552b692628SMatthew Knepley y[9*i+3] = sum4; 14562b692628SMatthew Knepley y[9*i+4] = sum5; 14572b692628SMatthew Knepley y[9*i+5] = sum6; 14582b692628SMatthew Knepley y[9*i+6] = sum7; 14592b692628SMatthew Knepley y[9*i+7] = sum8; 14602b692628SMatthew Knepley y[9*i+8] = sum9; 14612b692628SMatthew Knepley } 14622b692628SMatthew Knepley 1463dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz - 9*nonzerorow);CHKERRQ(ierr); 14643649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 14651ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 14662b692628SMatthew Knepley PetscFunctionReturn(0); 14672b692628SMatthew Knepley } 14682b692628SMatthew Knepley 1469b9cda22cSBarry Smith /* ------------------------------------------------------------------------------*/ 1470b9cda22cSBarry Smith 1471dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 14722b692628SMatthew Knepley { 14732b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 14742b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1475d2840e09SBarry Smith const PetscScalar *x,*v; 1476d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9; 1477dfbe8321SBarry Smith PetscErrorCode ierr; 1478d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1479d2840e09SBarry Smith PetscInt n,i; 14802b692628SMatthew Knepley 14812b692628SMatthew Knepley PetscFunctionBegin; 1482d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 14833649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 14841ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 14852b692628SMatthew Knepley 14862b692628SMatthew Knepley for (i=0; i<m; i++) { 14872b692628SMatthew Knepley idx = a->j + a->i[i]; 14882b692628SMatthew Knepley v = a->a + a->i[i]; 14892b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 14902b692628SMatthew Knepley alpha1 = x[9*i]; 14912b692628SMatthew Knepley alpha2 = x[9*i+1]; 14922b692628SMatthew Knepley alpha3 = x[9*i+2]; 14932b692628SMatthew Knepley alpha4 = x[9*i+3]; 14942b692628SMatthew Knepley alpha5 = x[9*i+4]; 14952b692628SMatthew Knepley alpha6 = x[9*i+5]; 14962b692628SMatthew Knepley alpha7 = x[9*i+6]; 14972b692628SMatthew Knepley alpha8 = x[9*i+7]; 14982f6bd0c6SMatthew Knepley alpha9 = x[9*i+8]; 14992b692628SMatthew Knepley while (n-->0) { 15002b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 15012b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 15022b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 15032b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 15042b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 15052b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 15062b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 15072b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 15082b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 15092b692628SMatthew Knepley idx++; v++; 15102b692628SMatthew Knepley } 15112b692628SMatthew Knepley } 1512dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz);CHKERRQ(ierr); 15133649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 15141ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 15152b692628SMatthew Knepley PetscFunctionReturn(0); 15162b692628SMatthew Knepley } 15172b692628SMatthew Knepley 1518dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 15192b692628SMatthew Knepley { 15202b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15212b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1522d2840e09SBarry Smith const PetscScalar *x,*v; 1523d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1524dfbe8321SBarry Smith PetscErrorCode ierr; 1525d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1526b24ad042SBarry Smith PetscInt n,i,jrow,j; 15272b692628SMatthew Knepley 15282b692628SMatthew Knepley PetscFunctionBegin; 15292b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 15303649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 15311ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 15322b692628SMatthew Knepley idx = a->j; 15332b692628SMatthew Knepley v = a->a; 15342b692628SMatthew Knepley ii = a->i; 15352b692628SMatthew Knepley 15362b692628SMatthew Knepley for (i=0; i<m; i++) { 15372b692628SMatthew Knepley jrow = ii[i]; 15382b692628SMatthew Knepley n = ii[i+1] - jrow; 15392b692628SMatthew Knepley sum1 = 0.0; 15402b692628SMatthew Knepley sum2 = 0.0; 15412b692628SMatthew Knepley sum3 = 0.0; 15422b692628SMatthew Knepley sum4 = 0.0; 15432b692628SMatthew Knepley sum5 = 0.0; 15442b692628SMatthew Knepley sum6 = 0.0; 15452b692628SMatthew Knepley sum7 = 0.0; 15462b692628SMatthew Knepley sum8 = 0.0; 15472b692628SMatthew Knepley sum9 = 0.0; 15482b692628SMatthew Knepley for (j=0; j<n; j++) { 15492b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 15502b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 15512b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 15522b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 15532b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 15542b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 15552b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 15562b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 15572b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 15582b692628SMatthew Knepley jrow++; 15592b692628SMatthew Knepley } 15602b692628SMatthew Knepley y[9*i] += sum1; 15612b692628SMatthew Knepley y[9*i+1] += sum2; 15622b692628SMatthew Knepley y[9*i+2] += sum3; 15632b692628SMatthew Knepley y[9*i+3] += sum4; 15642b692628SMatthew Knepley y[9*i+4] += sum5; 15652b692628SMatthew Knepley y[9*i+5] += sum6; 15662b692628SMatthew Knepley y[9*i+6] += sum7; 15672b692628SMatthew Knepley y[9*i+7] += sum8; 15682b692628SMatthew Knepley y[9*i+8] += sum9; 15692b692628SMatthew Knepley } 15702b692628SMatthew Knepley 1571efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz);CHKERRQ(ierr); 15723649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 15731ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 15742b692628SMatthew Knepley PetscFunctionReturn(0); 15752b692628SMatthew Knepley } 15762b692628SMatthew Knepley 1577dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 15782b692628SMatthew Knepley { 15792b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15802b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1581d2840e09SBarry Smith const PetscScalar *x,*v; 1582d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9; 1583dfbe8321SBarry Smith PetscErrorCode ierr; 1584d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1585d2840e09SBarry Smith PetscInt n,i; 15862b692628SMatthew Knepley 15872b692628SMatthew Knepley PetscFunctionBegin; 15882b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 15893649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 15901ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 15912b692628SMatthew Knepley for (i=0; i<m; i++) { 15922b692628SMatthew Knepley idx = a->j + a->i[i]; 15932b692628SMatthew Knepley v = a->a + a->i[i]; 15942b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 15952b692628SMatthew Knepley alpha1 = x[9*i]; 15962b692628SMatthew Knepley alpha2 = x[9*i+1]; 15972b692628SMatthew Knepley alpha3 = x[9*i+2]; 15982b692628SMatthew Knepley alpha4 = x[9*i+3]; 15992b692628SMatthew Knepley alpha5 = x[9*i+4]; 16002b692628SMatthew Knepley alpha6 = x[9*i+5]; 16012b692628SMatthew Knepley alpha7 = x[9*i+6]; 16022b692628SMatthew Knepley alpha8 = x[9*i+7]; 16032b692628SMatthew Knepley alpha9 = x[9*i+8]; 16042b692628SMatthew Knepley while (n-->0) { 16052b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 16062b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 16072b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 16082b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 16092b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 16102b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 16112b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 16122b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 16132b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 16142b692628SMatthew Knepley idx++; v++; 16152b692628SMatthew Knepley } 16162b692628SMatthew Knepley } 1617dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz);CHKERRQ(ierr); 16183649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 16191ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 16202b692628SMatthew Knepley PetscFunctionReturn(0); 16212b692628SMatthew Knepley } 1622b9cda22cSBarry Smith PetscErrorCode MatMult_SeqMAIJ_10(Mat A,Vec xx,Vec yy) 1623b9cda22cSBarry Smith { 1624b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1625b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1626d2840e09SBarry Smith const PetscScalar *x,*v; 1627d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10; 1628b9cda22cSBarry Smith PetscErrorCode ierr; 1629d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1630d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 1631b9cda22cSBarry Smith 1632b9cda22cSBarry Smith PetscFunctionBegin; 16333649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1634b9cda22cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1635b9cda22cSBarry Smith idx = a->j; 1636b9cda22cSBarry Smith v = a->a; 1637b9cda22cSBarry Smith ii = a->i; 1638b9cda22cSBarry Smith 1639b9cda22cSBarry Smith for (i=0; i<m; i++) { 1640b9cda22cSBarry Smith jrow = ii[i]; 1641b9cda22cSBarry Smith n = ii[i+1] - jrow; 1642b9cda22cSBarry Smith sum1 = 0.0; 1643b9cda22cSBarry Smith sum2 = 0.0; 1644b9cda22cSBarry Smith sum3 = 0.0; 1645b9cda22cSBarry Smith sum4 = 0.0; 1646b9cda22cSBarry Smith sum5 = 0.0; 1647b9cda22cSBarry Smith sum6 = 0.0; 1648b9cda22cSBarry Smith sum7 = 0.0; 1649b9cda22cSBarry Smith sum8 = 0.0; 1650b9cda22cSBarry Smith sum9 = 0.0; 1651b9cda22cSBarry Smith sum10 = 0.0; 165226fbe8dcSKarl Rupp 1653b3c51c66SMatthew Knepley nonzerorow += (n>0); 1654b9cda22cSBarry Smith for (j=0; j<n; j++) { 1655b9cda22cSBarry Smith sum1 += v[jrow]*x[10*idx[jrow]]; 1656b9cda22cSBarry Smith sum2 += v[jrow]*x[10*idx[jrow]+1]; 1657b9cda22cSBarry Smith sum3 += v[jrow]*x[10*idx[jrow]+2]; 1658b9cda22cSBarry Smith sum4 += v[jrow]*x[10*idx[jrow]+3]; 1659b9cda22cSBarry Smith sum5 += v[jrow]*x[10*idx[jrow]+4]; 1660b9cda22cSBarry Smith sum6 += v[jrow]*x[10*idx[jrow]+5]; 1661b9cda22cSBarry Smith sum7 += v[jrow]*x[10*idx[jrow]+6]; 1662b9cda22cSBarry Smith sum8 += v[jrow]*x[10*idx[jrow]+7]; 1663b9cda22cSBarry Smith sum9 += v[jrow]*x[10*idx[jrow]+8]; 1664b9cda22cSBarry Smith sum10 += v[jrow]*x[10*idx[jrow]+9]; 1665b9cda22cSBarry Smith jrow++; 1666b9cda22cSBarry Smith } 1667b9cda22cSBarry Smith y[10*i] = sum1; 1668b9cda22cSBarry Smith y[10*i+1] = sum2; 1669b9cda22cSBarry Smith y[10*i+2] = sum3; 1670b9cda22cSBarry Smith y[10*i+3] = sum4; 1671b9cda22cSBarry Smith y[10*i+4] = sum5; 1672b9cda22cSBarry Smith y[10*i+5] = sum6; 1673b9cda22cSBarry Smith y[10*i+6] = sum7; 1674b9cda22cSBarry Smith y[10*i+7] = sum8; 1675b9cda22cSBarry Smith y[10*i+8] = sum9; 1676b9cda22cSBarry Smith y[10*i+9] = sum10; 1677b9cda22cSBarry Smith } 1678b9cda22cSBarry Smith 1679dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz - 10.0*nonzerorow);CHKERRQ(ierr); 16803649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1681b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1682b9cda22cSBarry Smith PetscFunctionReturn(0); 1683b9cda22cSBarry Smith } 1684b9cda22cSBarry Smith 1685b9cda22cSBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_10(Mat A,Vec xx,Vec yy,Vec zz) 1686b9cda22cSBarry Smith { 1687b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1688b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1689d2840e09SBarry Smith const PetscScalar *x,*v; 1690d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10; 1691b9cda22cSBarry Smith PetscErrorCode ierr; 1692d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1693b9cda22cSBarry Smith PetscInt n,i,jrow,j; 1694b9cda22cSBarry Smith 1695b9cda22cSBarry Smith PetscFunctionBegin; 1696b9cda22cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 16973649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1698b9cda22cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1699b9cda22cSBarry Smith idx = a->j; 1700b9cda22cSBarry Smith v = a->a; 1701b9cda22cSBarry Smith ii = a->i; 1702b9cda22cSBarry Smith 1703b9cda22cSBarry Smith for (i=0; i<m; i++) { 1704b9cda22cSBarry Smith jrow = ii[i]; 1705b9cda22cSBarry Smith n = ii[i+1] - jrow; 1706b9cda22cSBarry Smith sum1 = 0.0; 1707b9cda22cSBarry Smith sum2 = 0.0; 1708b9cda22cSBarry Smith sum3 = 0.0; 1709b9cda22cSBarry Smith sum4 = 0.0; 1710b9cda22cSBarry Smith sum5 = 0.0; 1711b9cda22cSBarry Smith sum6 = 0.0; 1712b9cda22cSBarry Smith sum7 = 0.0; 1713b9cda22cSBarry Smith sum8 = 0.0; 1714b9cda22cSBarry Smith sum9 = 0.0; 1715b9cda22cSBarry Smith sum10 = 0.0; 1716b9cda22cSBarry Smith for (j=0; j<n; j++) { 1717b9cda22cSBarry Smith sum1 += v[jrow]*x[10*idx[jrow]]; 1718b9cda22cSBarry Smith sum2 += v[jrow]*x[10*idx[jrow]+1]; 1719b9cda22cSBarry Smith sum3 += v[jrow]*x[10*idx[jrow]+2]; 1720b9cda22cSBarry Smith sum4 += v[jrow]*x[10*idx[jrow]+3]; 1721b9cda22cSBarry Smith sum5 += v[jrow]*x[10*idx[jrow]+4]; 1722b9cda22cSBarry Smith sum6 += v[jrow]*x[10*idx[jrow]+5]; 1723b9cda22cSBarry Smith sum7 += v[jrow]*x[10*idx[jrow]+6]; 1724b9cda22cSBarry Smith sum8 += v[jrow]*x[10*idx[jrow]+7]; 1725b9cda22cSBarry Smith sum9 += v[jrow]*x[10*idx[jrow]+8]; 1726b9cda22cSBarry Smith sum10 += v[jrow]*x[10*idx[jrow]+9]; 1727b9cda22cSBarry Smith jrow++; 1728b9cda22cSBarry Smith } 1729b9cda22cSBarry Smith y[10*i] += sum1; 1730b9cda22cSBarry Smith y[10*i+1] += sum2; 1731b9cda22cSBarry Smith y[10*i+2] += sum3; 1732b9cda22cSBarry Smith y[10*i+3] += sum4; 1733b9cda22cSBarry Smith y[10*i+4] += sum5; 1734b9cda22cSBarry Smith y[10*i+5] += sum6; 1735b9cda22cSBarry Smith y[10*i+6] += sum7; 1736b9cda22cSBarry Smith y[10*i+7] += sum8; 1737b9cda22cSBarry Smith y[10*i+8] += sum9; 1738b9cda22cSBarry Smith y[10*i+9] += sum10; 1739b9cda22cSBarry Smith } 1740b9cda22cSBarry Smith 1741dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz);CHKERRQ(ierr); 17423649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1743b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1744b9cda22cSBarry Smith PetscFunctionReturn(0); 1745b9cda22cSBarry Smith } 1746b9cda22cSBarry Smith 1747b9cda22cSBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_10(Mat A,Vec xx,Vec yy) 1748b9cda22cSBarry Smith { 1749b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1750b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1751d2840e09SBarry Smith const PetscScalar *x,*v; 1752d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10; 1753b9cda22cSBarry Smith PetscErrorCode ierr; 1754d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1755d2840e09SBarry Smith PetscInt n,i; 1756b9cda22cSBarry Smith 1757b9cda22cSBarry Smith PetscFunctionBegin; 1758d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 17593649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1760b9cda22cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1761b9cda22cSBarry Smith 1762b9cda22cSBarry Smith for (i=0; i<m; i++) { 1763b9cda22cSBarry Smith idx = a->j + a->i[i]; 1764b9cda22cSBarry Smith v = a->a + a->i[i]; 1765b9cda22cSBarry Smith n = a->i[i+1] - a->i[i]; 1766e29fdc22SBarry Smith alpha1 = x[10*i]; 1767e29fdc22SBarry Smith alpha2 = x[10*i+1]; 1768e29fdc22SBarry Smith alpha3 = x[10*i+2]; 1769e29fdc22SBarry Smith alpha4 = x[10*i+3]; 1770e29fdc22SBarry Smith alpha5 = x[10*i+4]; 1771e29fdc22SBarry Smith alpha6 = x[10*i+5]; 1772e29fdc22SBarry Smith alpha7 = x[10*i+6]; 1773e29fdc22SBarry Smith alpha8 = x[10*i+7]; 1774e29fdc22SBarry Smith alpha9 = x[10*i+8]; 1775b9cda22cSBarry Smith alpha10 = x[10*i+9]; 1776b9cda22cSBarry Smith while (n-->0) { 1777e29fdc22SBarry Smith y[10*(*idx)] += alpha1*(*v); 1778e29fdc22SBarry Smith y[10*(*idx)+1] += alpha2*(*v); 1779e29fdc22SBarry Smith y[10*(*idx)+2] += alpha3*(*v); 1780e29fdc22SBarry Smith y[10*(*idx)+3] += alpha4*(*v); 1781e29fdc22SBarry Smith y[10*(*idx)+4] += alpha5*(*v); 1782e29fdc22SBarry Smith y[10*(*idx)+5] += alpha6*(*v); 1783e29fdc22SBarry Smith y[10*(*idx)+6] += alpha7*(*v); 1784e29fdc22SBarry Smith y[10*(*idx)+7] += alpha8*(*v); 1785e29fdc22SBarry Smith y[10*(*idx)+8] += alpha9*(*v); 1786b9cda22cSBarry Smith y[10*(*idx)+9] += alpha10*(*v); 1787b9cda22cSBarry Smith idx++; v++; 1788b9cda22cSBarry Smith } 1789b9cda22cSBarry Smith } 1790dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz);CHKERRQ(ierr); 17913649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1792b9cda22cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1793b9cda22cSBarry Smith PetscFunctionReturn(0); 1794b9cda22cSBarry Smith } 1795b9cda22cSBarry Smith 1796b9cda22cSBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_10(Mat A,Vec xx,Vec yy,Vec zz) 1797b9cda22cSBarry Smith { 1798b9cda22cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1799b9cda22cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1800d2840e09SBarry Smith const PetscScalar *x,*v; 1801d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10; 1802b9cda22cSBarry Smith PetscErrorCode ierr; 1803d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1804d2840e09SBarry Smith PetscInt n,i; 1805b9cda22cSBarry Smith 1806b9cda22cSBarry Smith PetscFunctionBegin; 1807b9cda22cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 18083649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1809b9cda22cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1810b9cda22cSBarry Smith for (i=0; i<m; i++) { 1811b9cda22cSBarry Smith idx = a->j + a->i[i]; 1812b9cda22cSBarry Smith v = a->a + a->i[i]; 1813b9cda22cSBarry Smith n = a->i[i+1] - a->i[i]; 1814b9cda22cSBarry Smith alpha1 = x[10*i]; 1815b9cda22cSBarry Smith alpha2 = x[10*i+1]; 1816b9cda22cSBarry Smith alpha3 = x[10*i+2]; 1817b9cda22cSBarry Smith alpha4 = x[10*i+3]; 1818b9cda22cSBarry Smith alpha5 = x[10*i+4]; 1819b9cda22cSBarry Smith alpha6 = x[10*i+5]; 1820b9cda22cSBarry Smith alpha7 = x[10*i+6]; 1821b9cda22cSBarry Smith alpha8 = x[10*i+7]; 1822b9cda22cSBarry Smith alpha9 = x[10*i+8]; 1823b9cda22cSBarry Smith alpha10 = x[10*i+9]; 1824b9cda22cSBarry Smith while (n-->0) { 1825b9cda22cSBarry Smith y[10*(*idx)] += alpha1*(*v); 1826b9cda22cSBarry Smith y[10*(*idx)+1] += alpha2*(*v); 1827b9cda22cSBarry Smith y[10*(*idx)+2] += alpha3*(*v); 1828b9cda22cSBarry Smith y[10*(*idx)+3] += alpha4*(*v); 1829b9cda22cSBarry Smith y[10*(*idx)+4] += alpha5*(*v); 1830b9cda22cSBarry Smith y[10*(*idx)+5] += alpha6*(*v); 1831b9cda22cSBarry Smith y[10*(*idx)+6] += alpha7*(*v); 1832b9cda22cSBarry Smith y[10*(*idx)+7] += alpha8*(*v); 1833b9cda22cSBarry Smith y[10*(*idx)+8] += alpha9*(*v); 1834b9cda22cSBarry Smith y[10*(*idx)+9] += alpha10*(*v); 1835b9cda22cSBarry Smith idx++; v++; 1836b9cda22cSBarry Smith } 1837b9cda22cSBarry Smith } 1838dc0b31edSSatish Balay ierr = PetscLogFlops(20.0*a->nz);CHKERRQ(ierr); 18393649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1840b9cda22cSBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1841b9cda22cSBarry Smith PetscFunctionReturn(0); 1842b9cda22cSBarry Smith } 1843b9cda22cSBarry Smith 18442b692628SMatthew Knepley 18452f7816d4SBarry Smith /*--------------------------------------------------------------------------------------------*/ 1846dbdd7285SBarry Smith PetscErrorCode MatMult_SeqMAIJ_11(Mat A,Vec xx,Vec yy) 1847dbdd7285SBarry Smith { 1848dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1849dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1850d2840e09SBarry Smith const PetscScalar *x,*v; 1851d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10, sum11; 1852dbdd7285SBarry Smith PetscErrorCode ierr; 1853d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1854d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 1855dbdd7285SBarry Smith 1856dbdd7285SBarry Smith PetscFunctionBegin; 18573649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1858dbdd7285SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1859dbdd7285SBarry Smith idx = a->j; 1860dbdd7285SBarry Smith v = a->a; 1861dbdd7285SBarry Smith ii = a->i; 1862dbdd7285SBarry Smith 1863dbdd7285SBarry Smith for (i=0; i<m; i++) { 1864dbdd7285SBarry Smith jrow = ii[i]; 1865dbdd7285SBarry Smith n = ii[i+1] - jrow; 1866dbdd7285SBarry Smith sum1 = 0.0; 1867dbdd7285SBarry Smith sum2 = 0.0; 1868dbdd7285SBarry Smith sum3 = 0.0; 1869dbdd7285SBarry Smith sum4 = 0.0; 1870dbdd7285SBarry Smith sum5 = 0.0; 1871dbdd7285SBarry Smith sum6 = 0.0; 1872dbdd7285SBarry Smith sum7 = 0.0; 1873dbdd7285SBarry Smith sum8 = 0.0; 1874dbdd7285SBarry Smith sum9 = 0.0; 1875dbdd7285SBarry Smith sum10 = 0.0; 1876dbdd7285SBarry Smith sum11 = 0.0; 187726fbe8dcSKarl Rupp 1878dbdd7285SBarry Smith nonzerorow += (n>0); 1879dbdd7285SBarry Smith for (j=0; j<n; j++) { 1880dbdd7285SBarry Smith sum1 += v[jrow]*x[11*idx[jrow]]; 1881dbdd7285SBarry Smith sum2 += v[jrow]*x[11*idx[jrow]+1]; 1882dbdd7285SBarry Smith sum3 += v[jrow]*x[11*idx[jrow]+2]; 1883dbdd7285SBarry Smith sum4 += v[jrow]*x[11*idx[jrow]+3]; 1884dbdd7285SBarry Smith sum5 += v[jrow]*x[11*idx[jrow]+4]; 1885dbdd7285SBarry Smith sum6 += v[jrow]*x[11*idx[jrow]+5]; 1886dbdd7285SBarry Smith sum7 += v[jrow]*x[11*idx[jrow]+6]; 1887dbdd7285SBarry Smith sum8 += v[jrow]*x[11*idx[jrow]+7]; 1888dbdd7285SBarry Smith sum9 += v[jrow]*x[11*idx[jrow]+8]; 1889dbdd7285SBarry Smith sum10 += v[jrow]*x[11*idx[jrow]+9]; 1890dbdd7285SBarry Smith sum11 += v[jrow]*x[11*idx[jrow]+10]; 1891dbdd7285SBarry Smith jrow++; 1892dbdd7285SBarry Smith } 1893dbdd7285SBarry Smith y[11*i] = sum1; 1894dbdd7285SBarry Smith y[11*i+1] = sum2; 1895dbdd7285SBarry Smith y[11*i+2] = sum3; 1896dbdd7285SBarry Smith y[11*i+3] = sum4; 1897dbdd7285SBarry Smith y[11*i+4] = sum5; 1898dbdd7285SBarry Smith y[11*i+5] = sum6; 1899dbdd7285SBarry Smith y[11*i+6] = sum7; 1900dbdd7285SBarry Smith y[11*i+7] = sum8; 1901dbdd7285SBarry Smith y[11*i+8] = sum9; 1902dbdd7285SBarry Smith y[11*i+9] = sum10; 1903dbdd7285SBarry Smith y[11*i+10] = sum11; 1904dbdd7285SBarry Smith } 1905dbdd7285SBarry Smith 1906dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz - 11*nonzerorow);CHKERRQ(ierr); 19073649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1908dbdd7285SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1909dbdd7285SBarry Smith PetscFunctionReturn(0); 1910dbdd7285SBarry Smith } 1911dbdd7285SBarry Smith 1912dbdd7285SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_11(Mat A,Vec xx,Vec yy,Vec zz) 1913dbdd7285SBarry Smith { 1914dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1915dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1916d2840e09SBarry Smith const PetscScalar *x,*v; 1917d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9, sum10, sum11; 1918dbdd7285SBarry Smith PetscErrorCode ierr; 1919d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 1920dbdd7285SBarry Smith PetscInt n,i,jrow,j; 1921dbdd7285SBarry Smith 1922dbdd7285SBarry Smith PetscFunctionBegin; 1923dbdd7285SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 19243649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1925dbdd7285SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1926dbdd7285SBarry Smith idx = a->j; 1927dbdd7285SBarry Smith v = a->a; 1928dbdd7285SBarry Smith ii = a->i; 1929dbdd7285SBarry Smith 1930dbdd7285SBarry Smith for (i=0; i<m; i++) { 1931dbdd7285SBarry Smith jrow = ii[i]; 1932dbdd7285SBarry Smith n = ii[i+1] - jrow; 1933dbdd7285SBarry Smith sum1 = 0.0; 1934dbdd7285SBarry Smith sum2 = 0.0; 1935dbdd7285SBarry Smith sum3 = 0.0; 1936dbdd7285SBarry Smith sum4 = 0.0; 1937dbdd7285SBarry Smith sum5 = 0.0; 1938dbdd7285SBarry Smith sum6 = 0.0; 1939dbdd7285SBarry Smith sum7 = 0.0; 1940dbdd7285SBarry Smith sum8 = 0.0; 1941dbdd7285SBarry Smith sum9 = 0.0; 1942dbdd7285SBarry Smith sum10 = 0.0; 1943dbdd7285SBarry Smith sum11 = 0.0; 1944dbdd7285SBarry Smith for (j=0; j<n; j++) { 1945dbdd7285SBarry Smith sum1 += v[jrow]*x[11*idx[jrow]]; 1946dbdd7285SBarry Smith sum2 += v[jrow]*x[11*idx[jrow]+1]; 1947dbdd7285SBarry Smith sum3 += v[jrow]*x[11*idx[jrow]+2]; 1948dbdd7285SBarry Smith sum4 += v[jrow]*x[11*idx[jrow]+3]; 1949dbdd7285SBarry Smith sum5 += v[jrow]*x[11*idx[jrow]+4]; 1950dbdd7285SBarry Smith sum6 += v[jrow]*x[11*idx[jrow]+5]; 1951dbdd7285SBarry Smith sum7 += v[jrow]*x[11*idx[jrow]+6]; 1952dbdd7285SBarry Smith sum8 += v[jrow]*x[11*idx[jrow]+7]; 1953dbdd7285SBarry Smith sum9 += v[jrow]*x[11*idx[jrow]+8]; 1954dbdd7285SBarry Smith sum10 += v[jrow]*x[11*idx[jrow]+9]; 1955dbdd7285SBarry Smith sum11 += v[jrow]*x[11*idx[jrow]+10]; 1956dbdd7285SBarry Smith jrow++; 1957dbdd7285SBarry Smith } 1958dbdd7285SBarry Smith y[11*i] += sum1; 1959dbdd7285SBarry Smith y[11*i+1] += sum2; 1960dbdd7285SBarry Smith y[11*i+2] += sum3; 1961dbdd7285SBarry Smith y[11*i+3] += sum4; 1962dbdd7285SBarry Smith y[11*i+4] += sum5; 1963dbdd7285SBarry Smith y[11*i+5] += sum6; 1964dbdd7285SBarry Smith y[11*i+6] += sum7; 1965dbdd7285SBarry Smith y[11*i+7] += sum8; 1966dbdd7285SBarry Smith y[11*i+8] += sum9; 1967dbdd7285SBarry Smith y[11*i+9] += sum10; 1968dbdd7285SBarry Smith y[11*i+10] += sum11; 1969dbdd7285SBarry Smith } 1970dbdd7285SBarry Smith 1971dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz);CHKERRQ(ierr); 19723649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1973dbdd7285SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1974dbdd7285SBarry Smith PetscFunctionReturn(0); 1975dbdd7285SBarry Smith } 1976dbdd7285SBarry Smith 1977dbdd7285SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_11(Mat A,Vec xx,Vec yy) 1978dbdd7285SBarry Smith { 1979dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1980dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1981d2840e09SBarry Smith const PetscScalar *x,*v; 1982d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10,alpha11; 1983dbdd7285SBarry Smith PetscErrorCode ierr; 1984d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 1985d2840e09SBarry Smith PetscInt n,i; 1986dbdd7285SBarry Smith 1987dbdd7285SBarry Smith PetscFunctionBegin; 1988d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 19893649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 1990dbdd7285SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1991dbdd7285SBarry Smith 1992dbdd7285SBarry Smith for (i=0; i<m; i++) { 1993dbdd7285SBarry Smith idx = a->j + a->i[i]; 1994dbdd7285SBarry Smith v = a->a + a->i[i]; 1995dbdd7285SBarry Smith n = a->i[i+1] - a->i[i]; 1996dbdd7285SBarry Smith alpha1 = x[11*i]; 1997dbdd7285SBarry Smith alpha2 = x[11*i+1]; 1998dbdd7285SBarry Smith alpha3 = x[11*i+2]; 1999dbdd7285SBarry Smith alpha4 = x[11*i+3]; 2000dbdd7285SBarry Smith alpha5 = x[11*i+4]; 2001dbdd7285SBarry Smith alpha6 = x[11*i+5]; 2002dbdd7285SBarry Smith alpha7 = x[11*i+6]; 2003dbdd7285SBarry Smith alpha8 = x[11*i+7]; 2004dbdd7285SBarry Smith alpha9 = x[11*i+8]; 2005dbdd7285SBarry Smith alpha10 = x[11*i+9]; 2006dbdd7285SBarry Smith alpha11 = x[11*i+10]; 2007dbdd7285SBarry Smith while (n-->0) { 2008dbdd7285SBarry Smith y[11*(*idx)] += alpha1*(*v); 2009dbdd7285SBarry Smith y[11*(*idx)+1] += alpha2*(*v); 2010dbdd7285SBarry Smith y[11*(*idx)+2] += alpha3*(*v); 2011dbdd7285SBarry Smith y[11*(*idx)+3] += alpha4*(*v); 2012dbdd7285SBarry Smith y[11*(*idx)+4] += alpha5*(*v); 2013dbdd7285SBarry Smith y[11*(*idx)+5] += alpha6*(*v); 2014dbdd7285SBarry Smith y[11*(*idx)+6] += alpha7*(*v); 2015dbdd7285SBarry Smith y[11*(*idx)+7] += alpha8*(*v); 2016dbdd7285SBarry Smith y[11*(*idx)+8] += alpha9*(*v); 2017dbdd7285SBarry Smith y[11*(*idx)+9] += alpha10*(*v); 2018dbdd7285SBarry Smith y[11*(*idx)+10] += alpha11*(*v); 2019dbdd7285SBarry Smith idx++; v++; 2020dbdd7285SBarry Smith } 2021dbdd7285SBarry Smith } 2022dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz);CHKERRQ(ierr); 20233649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2024dbdd7285SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 2025dbdd7285SBarry Smith PetscFunctionReturn(0); 2026dbdd7285SBarry Smith } 2027dbdd7285SBarry Smith 2028dbdd7285SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_11(Mat A,Vec xx,Vec yy,Vec zz) 2029dbdd7285SBarry Smith { 2030dbdd7285SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2031dbdd7285SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2032d2840e09SBarry Smith const PetscScalar *x,*v; 2033d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,alpha10,alpha11; 2034dbdd7285SBarry Smith PetscErrorCode ierr; 2035d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2036d2840e09SBarry Smith PetscInt n,i; 2037dbdd7285SBarry Smith 2038dbdd7285SBarry Smith PetscFunctionBegin; 2039dbdd7285SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 20403649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2041dbdd7285SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 2042dbdd7285SBarry Smith for (i=0; i<m; i++) { 2043dbdd7285SBarry Smith idx = a->j + a->i[i]; 2044dbdd7285SBarry Smith v = a->a + a->i[i]; 2045dbdd7285SBarry Smith n = a->i[i+1] - a->i[i]; 2046dbdd7285SBarry Smith alpha1 = x[11*i]; 2047dbdd7285SBarry Smith alpha2 = x[11*i+1]; 2048dbdd7285SBarry Smith alpha3 = x[11*i+2]; 2049dbdd7285SBarry Smith alpha4 = x[11*i+3]; 2050dbdd7285SBarry Smith alpha5 = x[11*i+4]; 2051dbdd7285SBarry Smith alpha6 = x[11*i+5]; 2052dbdd7285SBarry Smith alpha7 = x[11*i+6]; 2053dbdd7285SBarry Smith alpha8 = x[11*i+7]; 2054dbdd7285SBarry Smith alpha9 = x[11*i+8]; 2055dbdd7285SBarry Smith alpha10 = x[11*i+9]; 2056dbdd7285SBarry Smith alpha11 = x[11*i+10]; 2057dbdd7285SBarry Smith while (n-->0) { 2058dbdd7285SBarry Smith y[11*(*idx)] += alpha1*(*v); 2059dbdd7285SBarry Smith y[11*(*idx)+1] += alpha2*(*v); 2060dbdd7285SBarry Smith y[11*(*idx)+2] += alpha3*(*v); 2061dbdd7285SBarry Smith y[11*(*idx)+3] += alpha4*(*v); 2062dbdd7285SBarry Smith y[11*(*idx)+4] += alpha5*(*v); 2063dbdd7285SBarry Smith y[11*(*idx)+5] += alpha6*(*v); 2064dbdd7285SBarry Smith y[11*(*idx)+6] += alpha7*(*v); 2065dbdd7285SBarry Smith y[11*(*idx)+7] += alpha8*(*v); 2066dbdd7285SBarry Smith y[11*(*idx)+8] += alpha9*(*v); 2067dbdd7285SBarry Smith y[11*(*idx)+9] += alpha10*(*v); 2068dbdd7285SBarry Smith y[11*(*idx)+10] += alpha11*(*v); 2069dbdd7285SBarry Smith idx++; v++; 2070dbdd7285SBarry Smith } 2071dbdd7285SBarry Smith } 2072dbdd7285SBarry Smith ierr = PetscLogFlops(22*a->nz);CHKERRQ(ierr); 20733649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2074dbdd7285SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 2075dbdd7285SBarry Smith PetscFunctionReturn(0); 2076dbdd7285SBarry Smith } 2077dbdd7285SBarry Smith 2078dbdd7285SBarry Smith 2079dbdd7285SBarry Smith /*--------------------------------------------------------------------------------------------*/ 2080dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 20812f7816d4SBarry Smith { 20822f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 20832f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2084d2840e09SBarry Smith const PetscScalar *x,*v; 2085d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 20862f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 2087dfbe8321SBarry Smith PetscErrorCode ierr; 2088d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2089d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 20902f7816d4SBarry Smith 20912f7816d4SBarry Smith PetscFunctionBegin; 20923649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 20931ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 20942f7816d4SBarry Smith idx = a->j; 20952f7816d4SBarry Smith v = a->a; 20962f7816d4SBarry Smith ii = a->i; 20972f7816d4SBarry Smith 20982f7816d4SBarry Smith for (i=0; i<m; i++) { 20992f7816d4SBarry Smith jrow = ii[i]; 21002f7816d4SBarry Smith n = ii[i+1] - jrow; 21012f7816d4SBarry Smith sum1 = 0.0; 21022f7816d4SBarry Smith sum2 = 0.0; 21032f7816d4SBarry Smith sum3 = 0.0; 21042f7816d4SBarry Smith sum4 = 0.0; 21052f7816d4SBarry Smith sum5 = 0.0; 21062f7816d4SBarry Smith sum6 = 0.0; 21072f7816d4SBarry Smith sum7 = 0.0; 21082f7816d4SBarry Smith sum8 = 0.0; 21092f7816d4SBarry Smith sum9 = 0.0; 21102f7816d4SBarry Smith sum10 = 0.0; 21112f7816d4SBarry Smith sum11 = 0.0; 21122f7816d4SBarry Smith sum12 = 0.0; 21132f7816d4SBarry Smith sum13 = 0.0; 21142f7816d4SBarry Smith sum14 = 0.0; 21152f7816d4SBarry Smith sum15 = 0.0; 21162f7816d4SBarry Smith sum16 = 0.0; 211726fbe8dcSKarl Rupp 2118b3c51c66SMatthew Knepley nonzerorow += (n>0); 21192f7816d4SBarry Smith for (j=0; j<n; j++) { 21202f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 21212f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 21222f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 21232f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 21242f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 21252f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 21262f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 21272f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 21282f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 21292f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 21302f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 21312f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 21322f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 21332f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 21342f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 21352f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 21362f7816d4SBarry Smith jrow++; 21372f7816d4SBarry Smith } 21382f7816d4SBarry Smith y[16*i] = sum1; 21392f7816d4SBarry Smith y[16*i+1] = sum2; 21402f7816d4SBarry Smith y[16*i+2] = sum3; 21412f7816d4SBarry Smith y[16*i+3] = sum4; 21422f7816d4SBarry Smith y[16*i+4] = sum5; 21432f7816d4SBarry Smith y[16*i+5] = sum6; 21442f7816d4SBarry Smith y[16*i+6] = sum7; 21452f7816d4SBarry Smith y[16*i+7] = sum8; 21462f7816d4SBarry Smith y[16*i+8] = sum9; 21472f7816d4SBarry Smith y[16*i+9] = sum10; 21482f7816d4SBarry Smith y[16*i+10] = sum11; 21492f7816d4SBarry Smith y[16*i+11] = sum12; 21502f7816d4SBarry Smith y[16*i+12] = sum13; 21512f7816d4SBarry Smith y[16*i+13] = sum14; 21522f7816d4SBarry Smith y[16*i+14] = sum15; 21532f7816d4SBarry Smith y[16*i+15] = sum16; 21542f7816d4SBarry Smith } 21552f7816d4SBarry Smith 2156dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz - 16.0*nonzerorow);CHKERRQ(ierr); 21573649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 21581ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 21592f7816d4SBarry Smith PetscFunctionReturn(0); 21602f7816d4SBarry Smith } 21612f7816d4SBarry Smith 2162dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 21632f7816d4SBarry Smith { 21642f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 21652f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2166d2840e09SBarry Smith const PetscScalar *x,*v; 2167d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 21682f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 2169dfbe8321SBarry Smith PetscErrorCode ierr; 2170d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2171d2840e09SBarry Smith PetscInt n,i; 21722f7816d4SBarry Smith 21732f7816d4SBarry Smith PetscFunctionBegin; 2174d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 21753649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 21761ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 2177bfec09a0SHong Zhang 21782f7816d4SBarry Smith for (i=0; i<m; i++) { 2179bfec09a0SHong Zhang idx = a->j + a->i[i]; 2180bfec09a0SHong Zhang v = a->a + a->i[i]; 21812f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 21822f7816d4SBarry Smith alpha1 = x[16*i]; 21832f7816d4SBarry Smith alpha2 = x[16*i+1]; 21842f7816d4SBarry Smith alpha3 = x[16*i+2]; 21852f7816d4SBarry Smith alpha4 = x[16*i+3]; 21862f7816d4SBarry Smith alpha5 = x[16*i+4]; 21872f7816d4SBarry Smith alpha6 = x[16*i+5]; 21882f7816d4SBarry Smith alpha7 = x[16*i+6]; 21892f7816d4SBarry Smith alpha8 = x[16*i+7]; 21902f7816d4SBarry Smith alpha9 = x[16*i+8]; 21912f7816d4SBarry Smith alpha10 = x[16*i+9]; 21922f7816d4SBarry Smith alpha11 = x[16*i+10]; 21932f7816d4SBarry Smith alpha12 = x[16*i+11]; 21942f7816d4SBarry Smith alpha13 = x[16*i+12]; 21952f7816d4SBarry Smith alpha14 = x[16*i+13]; 21962f7816d4SBarry Smith alpha15 = x[16*i+14]; 21972f7816d4SBarry Smith alpha16 = x[16*i+15]; 21982f7816d4SBarry Smith while (n-->0) { 21992f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 22002f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 22012f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 22022f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 22032f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 22042f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 22052f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 22062f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 22072f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 22082f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 22092f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 22102f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 22112f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 22122f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 22132f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 22142f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 22152f7816d4SBarry Smith idx++; v++; 22162f7816d4SBarry Smith } 22172f7816d4SBarry Smith } 2218dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 22193649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 22201ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 22212f7816d4SBarry Smith PetscFunctionReturn(0); 22222f7816d4SBarry Smith } 22232f7816d4SBarry Smith 2224dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 22252f7816d4SBarry Smith { 22262f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 22272f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2228d2840e09SBarry Smith const PetscScalar *x,*v; 2229d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 22302f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 2231dfbe8321SBarry Smith PetscErrorCode ierr; 2232d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2233b24ad042SBarry Smith PetscInt n,i,jrow,j; 22342f7816d4SBarry Smith 22352f7816d4SBarry Smith PetscFunctionBegin; 22362f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 22373649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 22381ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 22392f7816d4SBarry Smith idx = a->j; 22402f7816d4SBarry Smith v = a->a; 22412f7816d4SBarry Smith ii = a->i; 22422f7816d4SBarry Smith 22432f7816d4SBarry Smith for (i=0; i<m; i++) { 22442f7816d4SBarry Smith jrow = ii[i]; 22452f7816d4SBarry Smith n = ii[i+1] - jrow; 22462f7816d4SBarry Smith sum1 = 0.0; 22472f7816d4SBarry Smith sum2 = 0.0; 22482f7816d4SBarry Smith sum3 = 0.0; 22492f7816d4SBarry Smith sum4 = 0.0; 22502f7816d4SBarry Smith sum5 = 0.0; 22512f7816d4SBarry Smith sum6 = 0.0; 22522f7816d4SBarry Smith sum7 = 0.0; 22532f7816d4SBarry Smith sum8 = 0.0; 22542f7816d4SBarry Smith sum9 = 0.0; 22552f7816d4SBarry Smith sum10 = 0.0; 22562f7816d4SBarry Smith sum11 = 0.0; 22572f7816d4SBarry Smith sum12 = 0.0; 22582f7816d4SBarry Smith sum13 = 0.0; 22592f7816d4SBarry Smith sum14 = 0.0; 22602f7816d4SBarry Smith sum15 = 0.0; 22612f7816d4SBarry Smith sum16 = 0.0; 22622f7816d4SBarry Smith for (j=0; j<n; j++) { 22632f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 22642f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 22652f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 22662f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 22672f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 22682f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 22692f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 22702f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 22712f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 22722f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 22732f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 22742f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 22752f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 22762f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 22772f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 22782f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 22792f7816d4SBarry Smith jrow++; 22802f7816d4SBarry Smith } 22812f7816d4SBarry Smith y[16*i] += sum1; 22822f7816d4SBarry Smith y[16*i+1] += sum2; 22832f7816d4SBarry Smith y[16*i+2] += sum3; 22842f7816d4SBarry Smith y[16*i+3] += sum4; 22852f7816d4SBarry Smith y[16*i+4] += sum5; 22862f7816d4SBarry Smith y[16*i+5] += sum6; 22872f7816d4SBarry Smith y[16*i+6] += sum7; 22882f7816d4SBarry Smith y[16*i+7] += sum8; 22892f7816d4SBarry Smith y[16*i+8] += sum9; 22902f7816d4SBarry Smith y[16*i+9] += sum10; 22912f7816d4SBarry Smith y[16*i+10] += sum11; 22922f7816d4SBarry Smith y[16*i+11] += sum12; 22932f7816d4SBarry Smith y[16*i+12] += sum13; 22942f7816d4SBarry Smith y[16*i+13] += sum14; 22952f7816d4SBarry Smith y[16*i+14] += sum15; 22962f7816d4SBarry Smith y[16*i+15] += sum16; 22972f7816d4SBarry Smith } 22982f7816d4SBarry Smith 2299dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 23003649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 23011ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 23022f7816d4SBarry Smith PetscFunctionReturn(0); 23032f7816d4SBarry Smith } 23042f7816d4SBarry Smith 2305dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 23062f7816d4SBarry Smith { 23072f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 23082f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2309d2840e09SBarry Smith const PetscScalar *x,*v; 2310d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 23112f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 2312dfbe8321SBarry Smith PetscErrorCode ierr; 2313d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2314d2840e09SBarry Smith PetscInt n,i; 23152f7816d4SBarry Smith 23162f7816d4SBarry Smith PetscFunctionBegin; 23172f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 23183649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 23191ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 23202f7816d4SBarry Smith for (i=0; i<m; i++) { 2321bfec09a0SHong Zhang idx = a->j + a->i[i]; 2322bfec09a0SHong Zhang v = a->a + a->i[i]; 23232f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 23242f7816d4SBarry Smith alpha1 = x[16*i]; 23252f7816d4SBarry Smith alpha2 = x[16*i+1]; 23262f7816d4SBarry Smith alpha3 = x[16*i+2]; 23272f7816d4SBarry Smith alpha4 = x[16*i+3]; 23282f7816d4SBarry Smith alpha5 = x[16*i+4]; 23292f7816d4SBarry Smith alpha6 = x[16*i+5]; 23302f7816d4SBarry Smith alpha7 = x[16*i+6]; 23312f7816d4SBarry Smith alpha8 = x[16*i+7]; 23322f7816d4SBarry Smith alpha9 = x[16*i+8]; 23332f7816d4SBarry Smith alpha10 = x[16*i+9]; 23342f7816d4SBarry Smith alpha11 = x[16*i+10]; 23352f7816d4SBarry Smith alpha12 = x[16*i+11]; 23362f7816d4SBarry Smith alpha13 = x[16*i+12]; 23372f7816d4SBarry Smith alpha14 = x[16*i+13]; 23382f7816d4SBarry Smith alpha15 = x[16*i+14]; 23392f7816d4SBarry Smith alpha16 = x[16*i+15]; 23402f7816d4SBarry Smith while (n-->0) { 23412f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 23422f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 23432f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 23442f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 23452f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 23462f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 23472f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 23482f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 23492f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 23502f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 23512f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 23522f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 23532f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 23542f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 23552f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 23562f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 23572f7816d4SBarry Smith idx++; v++; 23582f7816d4SBarry Smith } 23592f7816d4SBarry Smith } 2360dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 23613649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 23621ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 236366ed3db0SBarry Smith PetscFunctionReturn(0); 236466ed3db0SBarry Smith } 236566ed3db0SBarry Smith 2366ed1c418cSBarry Smith /*--------------------------------------------------------------------------------------------*/ 2367ed1c418cSBarry Smith PetscErrorCode MatMult_SeqMAIJ_18(Mat A,Vec xx,Vec yy) 2368ed1c418cSBarry Smith { 2369ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2370ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2371d2840e09SBarry Smith const PetscScalar *x,*v; 2372d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 2373ed1c418cSBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16, sum17, sum18; 2374ed1c418cSBarry Smith PetscErrorCode ierr; 2375d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2376d2840e09SBarry Smith PetscInt nonzerorow=0,n,i,jrow,j; 2377ed1c418cSBarry Smith 2378ed1c418cSBarry Smith PetscFunctionBegin; 23793649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2380ed1c418cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 2381ed1c418cSBarry Smith idx = a->j; 2382ed1c418cSBarry Smith v = a->a; 2383ed1c418cSBarry Smith ii = a->i; 2384ed1c418cSBarry Smith 2385ed1c418cSBarry Smith for (i=0; i<m; i++) { 2386ed1c418cSBarry Smith jrow = ii[i]; 2387ed1c418cSBarry Smith n = ii[i+1] - jrow; 2388ed1c418cSBarry Smith sum1 = 0.0; 2389ed1c418cSBarry Smith sum2 = 0.0; 2390ed1c418cSBarry Smith sum3 = 0.0; 2391ed1c418cSBarry Smith sum4 = 0.0; 2392ed1c418cSBarry Smith sum5 = 0.0; 2393ed1c418cSBarry Smith sum6 = 0.0; 2394ed1c418cSBarry Smith sum7 = 0.0; 2395ed1c418cSBarry Smith sum8 = 0.0; 2396ed1c418cSBarry Smith sum9 = 0.0; 2397ed1c418cSBarry Smith sum10 = 0.0; 2398ed1c418cSBarry Smith sum11 = 0.0; 2399ed1c418cSBarry Smith sum12 = 0.0; 2400ed1c418cSBarry Smith sum13 = 0.0; 2401ed1c418cSBarry Smith sum14 = 0.0; 2402ed1c418cSBarry Smith sum15 = 0.0; 2403ed1c418cSBarry Smith sum16 = 0.0; 2404ed1c418cSBarry Smith sum17 = 0.0; 2405ed1c418cSBarry Smith sum18 = 0.0; 240626fbe8dcSKarl Rupp 2407ed1c418cSBarry Smith nonzerorow += (n>0); 2408ed1c418cSBarry Smith for (j=0; j<n; j++) { 2409ed1c418cSBarry Smith sum1 += v[jrow]*x[18*idx[jrow]]; 2410ed1c418cSBarry Smith sum2 += v[jrow]*x[18*idx[jrow]+1]; 2411ed1c418cSBarry Smith sum3 += v[jrow]*x[18*idx[jrow]+2]; 2412ed1c418cSBarry Smith sum4 += v[jrow]*x[18*idx[jrow]+3]; 2413ed1c418cSBarry Smith sum5 += v[jrow]*x[18*idx[jrow]+4]; 2414ed1c418cSBarry Smith sum6 += v[jrow]*x[18*idx[jrow]+5]; 2415ed1c418cSBarry Smith sum7 += v[jrow]*x[18*idx[jrow]+6]; 2416ed1c418cSBarry Smith sum8 += v[jrow]*x[18*idx[jrow]+7]; 2417ed1c418cSBarry Smith sum9 += v[jrow]*x[18*idx[jrow]+8]; 2418ed1c418cSBarry Smith sum10 += v[jrow]*x[18*idx[jrow]+9]; 2419ed1c418cSBarry Smith sum11 += v[jrow]*x[18*idx[jrow]+10]; 2420ed1c418cSBarry Smith sum12 += v[jrow]*x[18*idx[jrow]+11]; 2421ed1c418cSBarry Smith sum13 += v[jrow]*x[18*idx[jrow]+12]; 2422ed1c418cSBarry Smith sum14 += v[jrow]*x[18*idx[jrow]+13]; 2423ed1c418cSBarry Smith sum15 += v[jrow]*x[18*idx[jrow]+14]; 2424ed1c418cSBarry Smith sum16 += v[jrow]*x[18*idx[jrow]+15]; 2425ed1c418cSBarry Smith sum17 += v[jrow]*x[18*idx[jrow]+16]; 2426ed1c418cSBarry Smith sum18 += v[jrow]*x[18*idx[jrow]+17]; 2427ed1c418cSBarry Smith jrow++; 2428ed1c418cSBarry Smith } 2429ed1c418cSBarry Smith y[18*i] = sum1; 2430ed1c418cSBarry Smith y[18*i+1] = sum2; 2431ed1c418cSBarry Smith y[18*i+2] = sum3; 2432ed1c418cSBarry Smith y[18*i+3] = sum4; 2433ed1c418cSBarry Smith y[18*i+4] = sum5; 2434ed1c418cSBarry Smith y[18*i+5] = sum6; 2435ed1c418cSBarry Smith y[18*i+6] = sum7; 2436ed1c418cSBarry Smith y[18*i+7] = sum8; 2437ed1c418cSBarry Smith y[18*i+8] = sum9; 2438ed1c418cSBarry Smith y[18*i+9] = sum10; 2439ed1c418cSBarry Smith y[18*i+10] = sum11; 2440ed1c418cSBarry Smith y[18*i+11] = sum12; 2441ed1c418cSBarry Smith y[18*i+12] = sum13; 2442ed1c418cSBarry Smith y[18*i+13] = sum14; 2443ed1c418cSBarry Smith y[18*i+14] = sum15; 2444ed1c418cSBarry Smith y[18*i+15] = sum16; 2445ed1c418cSBarry Smith y[18*i+16] = sum17; 2446ed1c418cSBarry Smith y[18*i+17] = sum18; 2447ed1c418cSBarry Smith } 2448ed1c418cSBarry Smith 2449dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz - 18.0*nonzerorow);CHKERRQ(ierr); 24503649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2451ed1c418cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 2452ed1c418cSBarry Smith PetscFunctionReturn(0); 2453ed1c418cSBarry Smith } 2454ed1c418cSBarry Smith 2455ed1c418cSBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_18(Mat A,Vec xx,Vec yy) 2456ed1c418cSBarry Smith { 2457ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2458ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2459d2840e09SBarry Smith const PetscScalar *x,*v; 2460d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 2461ed1c418cSBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16,alpha17,alpha18; 2462ed1c418cSBarry Smith PetscErrorCode ierr; 2463d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2464d2840e09SBarry Smith PetscInt n,i; 2465ed1c418cSBarry Smith 2466ed1c418cSBarry Smith PetscFunctionBegin; 2467d2840e09SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 24683649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2469ed1c418cSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 2470ed1c418cSBarry Smith 2471ed1c418cSBarry Smith for (i=0; i<m; i++) { 2472ed1c418cSBarry Smith idx = a->j + a->i[i]; 2473ed1c418cSBarry Smith v = a->a + a->i[i]; 2474ed1c418cSBarry Smith n = a->i[i+1] - a->i[i]; 2475ed1c418cSBarry Smith alpha1 = x[18*i]; 2476ed1c418cSBarry Smith alpha2 = x[18*i+1]; 2477ed1c418cSBarry Smith alpha3 = x[18*i+2]; 2478ed1c418cSBarry Smith alpha4 = x[18*i+3]; 2479ed1c418cSBarry Smith alpha5 = x[18*i+4]; 2480ed1c418cSBarry Smith alpha6 = x[18*i+5]; 2481ed1c418cSBarry Smith alpha7 = x[18*i+6]; 2482ed1c418cSBarry Smith alpha8 = x[18*i+7]; 2483ed1c418cSBarry Smith alpha9 = x[18*i+8]; 2484ed1c418cSBarry Smith alpha10 = x[18*i+9]; 2485ed1c418cSBarry Smith alpha11 = x[18*i+10]; 2486ed1c418cSBarry Smith alpha12 = x[18*i+11]; 2487ed1c418cSBarry Smith alpha13 = x[18*i+12]; 2488ed1c418cSBarry Smith alpha14 = x[18*i+13]; 2489ed1c418cSBarry Smith alpha15 = x[18*i+14]; 2490ed1c418cSBarry Smith alpha16 = x[18*i+15]; 2491ed1c418cSBarry Smith alpha17 = x[18*i+16]; 2492ed1c418cSBarry Smith alpha18 = x[18*i+17]; 2493ed1c418cSBarry Smith while (n-->0) { 2494ed1c418cSBarry Smith y[18*(*idx)] += alpha1*(*v); 2495ed1c418cSBarry Smith y[18*(*idx)+1] += alpha2*(*v); 2496ed1c418cSBarry Smith y[18*(*idx)+2] += alpha3*(*v); 2497ed1c418cSBarry Smith y[18*(*idx)+3] += alpha4*(*v); 2498ed1c418cSBarry Smith y[18*(*idx)+4] += alpha5*(*v); 2499ed1c418cSBarry Smith y[18*(*idx)+5] += alpha6*(*v); 2500ed1c418cSBarry Smith y[18*(*idx)+6] += alpha7*(*v); 2501ed1c418cSBarry Smith y[18*(*idx)+7] += alpha8*(*v); 2502ed1c418cSBarry Smith y[18*(*idx)+8] += alpha9*(*v); 2503ed1c418cSBarry Smith y[18*(*idx)+9] += alpha10*(*v); 2504ed1c418cSBarry Smith y[18*(*idx)+10] += alpha11*(*v); 2505ed1c418cSBarry Smith y[18*(*idx)+11] += alpha12*(*v); 2506ed1c418cSBarry Smith y[18*(*idx)+12] += alpha13*(*v); 2507ed1c418cSBarry Smith y[18*(*idx)+13] += alpha14*(*v); 2508ed1c418cSBarry Smith y[18*(*idx)+14] += alpha15*(*v); 2509ed1c418cSBarry Smith y[18*(*idx)+15] += alpha16*(*v); 2510ed1c418cSBarry Smith y[18*(*idx)+16] += alpha17*(*v); 2511ed1c418cSBarry Smith y[18*(*idx)+17] += alpha18*(*v); 2512ed1c418cSBarry Smith idx++; v++; 2513ed1c418cSBarry Smith } 2514ed1c418cSBarry Smith } 2515dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz);CHKERRQ(ierr); 25163649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2517ed1c418cSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 2518ed1c418cSBarry Smith PetscFunctionReturn(0); 2519ed1c418cSBarry Smith } 2520ed1c418cSBarry Smith 2521ed1c418cSBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_18(Mat A,Vec xx,Vec yy,Vec zz) 2522ed1c418cSBarry Smith { 2523ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2524ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2525d2840e09SBarry Smith const PetscScalar *x,*v; 2526d2840e09SBarry Smith PetscScalar *y,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 2527ed1c418cSBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16, sum17, sum18; 2528ed1c418cSBarry Smith PetscErrorCode ierr; 2529d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 2530ed1c418cSBarry Smith PetscInt n,i,jrow,j; 2531ed1c418cSBarry Smith 2532ed1c418cSBarry Smith PetscFunctionBegin; 2533ed1c418cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 25343649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2535ed1c418cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 2536ed1c418cSBarry Smith idx = a->j; 2537ed1c418cSBarry Smith v = a->a; 2538ed1c418cSBarry Smith ii = a->i; 2539ed1c418cSBarry Smith 2540ed1c418cSBarry Smith for (i=0; i<m; i++) { 2541ed1c418cSBarry Smith jrow = ii[i]; 2542ed1c418cSBarry Smith n = ii[i+1] - jrow; 2543ed1c418cSBarry Smith sum1 = 0.0; 2544ed1c418cSBarry Smith sum2 = 0.0; 2545ed1c418cSBarry Smith sum3 = 0.0; 2546ed1c418cSBarry Smith sum4 = 0.0; 2547ed1c418cSBarry Smith sum5 = 0.0; 2548ed1c418cSBarry Smith sum6 = 0.0; 2549ed1c418cSBarry Smith sum7 = 0.0; 2550ed1c418cSBarry Smith sum8 = 0.0; 2551ed1c418cSBarry Smith sum9 = 0.0; 2552ed1c418cSBarry Smith sum10 = 0.0; 2553ed1c418cSBarry Smith sum11 = 0.0; 2554ed1c418cSBarry Smith sum12 = 0.0; 2555ed1c418cSBarry Smith sum13 = 0.0; 2556ed1c418cSBarry Smith sum14 = 0.0; 2557ed1c418cSBarry Smith sum15 = 0.0; 2558ed1c418cSBarry Smith sum16 = 0.0; 2559ed1c418cSBarry Smith sum17 = 0.0; 2560ed1c418cSBarry Smith sum18 = 0.0; 2561ed1c418cSBarry Smith for (j=0; j<n; j++) { 2562ed1c418cSBarry Smith sum1 += v[jrow]*x[18*idx[jrow]]; 2563ed1c418cSBarry Smith sum2 += v[jrow]*x[18*idx[jrow]+1]; 2564ed1c418cSBarry Smith sum3 += v[jrow]*x[18*idx[jrow]+2]; 2565ed1c418cSBarry Smith sum4 += v[jrow]*x[18*idx[jrow]+3]; 2566ed1c418cSBarry Smith sum5 += v[jrow]*x[18*idx[jrow]+4]; 2567ed1c418cSBarry Smith sum6 += v[jrow]*x[18*idx[jrow]+5]; 2568ed1c418cSBarry Smith sum7 += v[jrow]*x[18*idx[jrow]+6]; 2569ed1c418cSBarry Smith sum8 += v[jrow]*x[18*idx[jrow]+7]; 2570ed1c418cSBarry Smith sum9 += v[jrow]*x[18*idx[jrow]+8]; 2571ed1c418cSBarry Smith sum10 += v[jrow]*x[18*idx[jrow]+9]; 2572ed1c418cSBarry Smith sum11 += v[jrow]*x[18*idx[jrow]+10]; 2573ed1c418cSBarry Smith sum12 += v[jrow]*x[18*idx[jrow]+11]; 2574ed1c418cSBarry Smith sum13 += v[jrow]*x[18*idx[jrow]+12]; 2575ed1c418cSBarry Smith sum14 += v[jrow]*x[18*idx[jrow]+13]; 2576ed1c418cSBarry Smith sum15 += v[jrow]*x[18*idx[jrow]+14]; 2577ed1c418cSBarry Smith sum16 += v[jrow]*x[18*idx[jrow]+15]; 2578ed1c418cSBarry Smith sum17 += v[jrow]*x[18*idx[jrow]+16]; 2579ed1c418cSBarry Smith sum18 += v[jrow]*x[18*idx[jrow]+17]; 2580ed1c418cSBarry Smith jrow++; 2581ed1c418cSBarry Smith } 2582ed1c418cSBarry Smith y[18*i] += sum1; 2583ed1c418cSBarry Smith y[18*i+1] += sum2; 2584ed1c418cSBarry Smith y[18*i+2] += sum3; 2585ed1c418cSBarry Smith y[18*i+3] += sum4; 2586ed1c418cSBarry Smith y[18*i+4] += sum5; 2587ed1c418cSBarry Smith y[18*i+5] += sum6; 2588ed1c418cSBarry Smith y[18*i+6] += sum7; 2589ed1c418cSBarry Smith y[18*i+7] += sum8; 2590ed1c418cSBarry Smith y[18*i+8] += sum9; 2591ed1c418cSBarry Smith y[18*i+9] += sum10; 2592ed1c418cSBarry Smith y[18*i+10] += sum11; 2593ed1c418cSBarry Smith y[18*i+11] += sum12; 2594ed1c418cSBarry Smith y[18*i+12] += sum13; 2595ed1c418cSBarry Smith y[18*i+13] += sum14; 2596ed1c418cSBarry Smith y[18*i+14] += sum15; 2597ed1c418cSBarry Smith y[18*i+15] += sum16; 2598ed1c418cSBarry Smith y[18*i+16] += sum17; 2599ed1c418cSBarry Smith y[18*i+17] += sum18; 2600ed1c418cSBarry Smith } 2601ed1c418cSBarry Smith 2602dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz);CHKERRQ(ierr); 26033649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2604ed1c418cSBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 2605ed1c418cSBarry Smith PetscFunctionReturn(0); 2606ed1c418cSBarry Smith } 2607ed1c418cSBarry Smith 2608ed1c418cSBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_18(Mat A,Vec xx,Vec yy,Vec zz) 2609ed1c418cSBarry Smith { 2610ed1c418cSBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2611ed1c418cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 2612d2840e09SBarry Smith const PetscScalar *x,*v; 2613d2840e09SBarry Smith PetscScalar *y,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 2614ed1c418cSBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16,alpha17,alpha18; 2615ed1c418cSBarry Smith PetscErrorCode ierr; 2616d2840e09SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx; 2617d2840e09SBarry Smith PetscInt n,i; 2618ed1c418cSBarry Smith 2619ed1c418cSBarry Smith PetscFunctionBegin; 2620ed1c418cSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 26213649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 2622ed1c418cSBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 2623ed1c418cSBarry Smith for (i=0; i<m; i++) { 2624ed1c418cSBarry Smith idx = a->j + a->i[i]; 2625ed1c418cSBarry Smith v = a->a + a->i[i]; 2626ed1c418cSBarry Smith n = a->i[i+1] - a->i[i]; 2627ed1c418cSBarry Smith alpha1 = x[18*i]; 2628ed1c418cSBarry Smith alpha2 = x[18*i+1]; 2629ed1c418cSBarry Smith alpha3 = x[18*i+2]; 2630ed1c418cSBarry Smith alpha4 = x[18*i+3]; 2631ed1c418cSBarry Smith alpha5 = x[18*i+4]; 2632ed1c418cSBarry Smith alpha6 = x[18*i+5]; 2633ed1c418cSBarry Smith alpha7 = x[18*i+6]; 2634ed1c418cSBarry Smith alpha8 = x[18*i+7]; 2635ed1c418cSBarry Smith alpha9 = x[18*i+8]; 2636ed1c418cSBarry Smith alpha10 = x[18*i+9]; 2637ed1c418cSBarry Smith alpha11 = x[18*i+10]; 2638ed1c418cSBarry Smith alpha12 = x[18*i+11]; 2639ed1c418cSBarry Smith alpha13 = x[18*i+12]; 2640ed1c418cSBarry Smith alpha14 = x[18*i+13]; 2641ed1c418cSBarry Smith alpha15 = x[18*i+14]; 2642ed1c418cSBarry Smith alpha16 = x[18*i+15]; 2643ed1c418cSBarry Smith alpha17 = x[18*i+16]; 2644ed1c418cSBarry Smith alpha18 = x[18*i+17]; 2645ed1c418cSBarry Smith while (n-->0) { 2646ed1c418cSBarry Smith y[18*(*idx)] += alpha1*(*v); 2647ed1c418cSBarry Smith y[18*(*idx)+1] += alpha2*(*v); 2648ed1c418cSBarry Smith y[18*(*idx)+2] += alpha3*(*v); 2649ed1c418cSBarry Smith y[18*(*idx)+3] += alpha4*(*v); 2650ed1c418cSBarry Smith y[18*(*idx)+4] += alpha5*(*v); 2651ed1c418cSBarry Smith y[18*(*idx)+5] += alpha6*(*v); 2652ed1c418cSBarry Smith y[18*(*idx)+6] += alpha7*(*v); 2653ed1c418cSBarry Smith y[18*(*idx)+7] += alpha8*(*v); 2654ed1c418cSBarry Smith y[18*(*idx)+8] += alpha9*(*v); 2655ed1c418cSBarry Smith y[18*(*idx)+9] += alpha10*(*v); 2656ed1c418cSBarry Smith y[18*(*idx)+10] += alpha11*(*v); 2657ed1c418cSBarry Smith y[18*(*idx)+11] += alpha12*(*v); 2658ed1c418cSBarry Smith y[18*(*idx)+12] += alpha13*(*v); 2659ed1c418cSBarry Smith y[18*(*idx)+13] += alpha14*(*v); 2660ed1c418cSBarry Smith y[18*(*idx)+14] += alpha15*(*v); 2661ed1c418cSBarry Smith y[18*(*idx)+15] += alpha16*(*v); 2662ed1c418cSBarry Smith y[18*(*idx)+16] += alpha17*(*v); 2663ed1c418cSBarry Smith y[18*(*idx)+17] += alpha18*(*v); 2664ed1c418cSBarry Smith idx++; v++; 2665ed1c418cSBarry Smith } 2666ed1c418cSBarry Smith } 2667dc0b31edSSatish Balay ierr = PetscLogFlops(36.0*a->nz);CHKERRQ(ierr); 26683649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 2669ed1c418cSBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 2670ed1c418cSBarry Smith PetscFunctionReturn(0); 2671ed1c418cSBarry Smith } 2672ed1c418cSBarry Smith 26736861f193SBarry Smith PetscErrorCode MatMult_SeqMAIJ_N(Mat A,Vec xx,Vec yy) 26746861f193SBarry Smith { 26756861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 26766861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 26776861f193SBarry Smith const PetscScalar *x,*v; 26786861f193SBarry Smith PetscScalar *y,*sums; 26796861f193SBarry Smith PetscErrorCode ierr; 26806861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 26816861f193SBarry Smith PetscInt n,i,jrow,j,dof = b->dof,k; 26826861f193SBarry Smith 26836861f193SBarry Smith PetscFunctionBegin; 26843649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 26856861f193SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 26866861f193SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 26876861f193SBarry Smith idx = a->j; 26886861f193SBarry Smith v = a->a; 26896861f193SBarry Smith ii = a->i; 26906861f193SBarry Smith 26916861f193SBarry Smith for (i=0; i<m; i++) { 26926861f193SBarry Smith jrow = ii[i]; 26936861f193SBarry Smith n = ii[i+1] - jrow; 26946861f193SBarry Smith sums = y + dof*i; 26956861f193SBarry Smith for (j=0; j<n; j++) { 26966861f193SBarry Smith for (k=0; k<dof; k++) { 26976861f193SBarry Smith sums[k] += v[jrow]*x[dof*idx[jrow]+k]; 26986861f193SBarry Smith } 26996861f193SBarry Smith jrow++; 27006861f193SBarry Smith } 27016861f193SBarry Smith } 27026861f193SBarry Smith 27036861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 27043649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 27056861f193SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 27066861f193SBarry Smith PetscFunctionReturn(0); 27076861f193SBarry Smith } 27086861f193SBarry Smith 27096861f193SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 27106861f193SBarry Smith { 27116861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 27126861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 27136861f193SBarry Smith const PetscScalar *x,*v; 27146861f193SBarry Smith PetscScalar *y,*sums; 27156861f193SBarry Smith PetscErrorCode ierr; 27166861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,*ii; 27176861f193SBarry Smith PetscInt n,i,jrow,j,dof = b->dof,k; 27186861f193SBarry Smith 27196861f193SBarry Smith PetscFunctionBegin; 27206861f193SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 27213649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 27226861f193SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 27236861f193SBarry Smith idx = a->j; 27246861f193SBarry Smith v = a->a; 27256861f193SBarry Smith ii = a->i; 27266861f193SBarry Smith 27276861f193SBarry Smith for (i=0; i<m; i++) { 27286861f193SBarry Smith jrow = ii[i]; 27296861f193SBarry Smith n = ii[i+1] - jrow; 27306861f193SBarry Smith sums = y + dof*i; 27316861f193SBarry Smith for (j=0; j<n; j++) { 27326861f193SBarry Smith for (k=0; k<dof; k++) { 27336861f193SBarry Smith sums[k] += v[jrow]*x[dof*idx[jrow]+k]; 27346861f193SBarry Smith } 27356861f193SBarry Smith jrow++; 27366861f193SBarry Smith } 27376861f193SBarry Smith } 27386861f193SBarry Smith 27396861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 27403649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 27416861f193SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 27426861f193SBarry Smith PetscFunctionReturn(0); 27436861f193SBarry Smith } 27446861f193SBarry Smith 27456861f193SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_N(Mat A,Vec xx,Vec yy) 27466861f193SBarry Smith { 27476861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 27486861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 27496861f193SBarry Smith const PetscScalar *x,*v,*alpha; 27506861f193SBarry Smith PetscScalar *y; 27516861f193SBarry Smith PetscErrorCode ierr; 27526861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,dof = b->dof; 27536861f193SBarry Smith PetscInt n,i,k; 27546861f193SBarry Smith 27556861f193SBarry Smith PetscFunctionBegin; 27563649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 27576861f193SBarry Smith ierr = VecSet(yy,0.0);CHKERRQ(ierr); 27586861f193SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 27596861f193SBarry Smith for (i=0; i<m; i++) { 27606861f193SBarry Smith idx = a->j + a->i[i]; 27616861f193SBarry Smith v = a->a + a->i[i]; 27626861f193SBarry Smith n = a->i[i+1] - a->i[i]; 27636861f193SBarry Smith alpha = x + dof*i; 27646861f193SBarry Smith while (n-->0) { 27656861f193SBarry Smith for (k=0; k<dof; k++) { 27666861f193SBarry Smith y[dof*(*idx)+k] += alpha[k]*(*v); 27676861f193SBarry Smith } 276883ce7366SBarry Smith idx++; v++; 27696861f193SBarry Smith } 27706861f193SBarry Smith } 27716861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 27723649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 27736861f193SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 27746861f193SBarry Smith PetscFunctionReturn(0); 27756861f193SBarry Smith } 27766861f193SBarry Smith 27776861f193SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 27786861f193SBarry Smith { 27796861f193SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 27806861f193SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 27816861f193SBarry Smith const PetscScalar *x,*v,*alpha; 27826861f193SBarry Smith PetscScalar *y; 27836861f193SBarry Smith PetscErrorCode ierr; 27846861f193SBarry Smith const PetscInt m = b->AIJ->rmap->n,*idx,dof = b->dof; 27856861f193SBarry Smith PetscInt n,i,k; 27866861f193SBarry Smith 27876861f193SBarry Smith PetscFunctionBegin; 27886861f193SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 27893649974fSBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 27906861f193SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 27916861f193SBarry Smith for (i=0; i<m; i++) { 27926861f193SBarry Smith idx = a->j + a->i[i]; 27936861f193SBarry Smith v = a->a + a->i[i]; 27946861f193SBarry Smith n = a->i[i+1] - a->i[i]; 27956861f193SBarry Smith alpha = x + dof*i; 27966861f193SBarry Smith while (n-->0) { 27976861f193SBarry Smith for (k=0; k<dof; k++) { 27986861f193SBarry Smith y[dof*(*idx)+k] += alpha[k]*(*v); 27996861f193SBarry Smith } 280083ce7366SBarry Smith idx++; v++; 28016861f193SBarry Smith } 28026861f193SBarry Smith } 28036861f193SBarry Smith ierr = PetscLogFlops(2.0*dof*a->nz);CHKERRQ(ierr); 28043649974fSBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 28056861f193SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 28066861f193SBarry Smith PetscFunctionReturn(0); 28076861f193SBarry Smith } 28086861f193SBarry Smith 2809f4a53059SBarry Smith /*===================================================================================*/ 2810dfbe8321SBarry Smith PetscErrorCode MatMult_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 2811f4a53059SBarry Smith { 28124cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2813dfbe8321SBarry Smith PetscErrorCode ierr; 2814f4a53059SBarry Smith 2815b24ad042SBarry Smith PetscFunctionBegin; 2816f4a53059SBarry Smith /* start the scatter */ 2817ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 28184cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->mult)(b->AIJ,xx,yy);CHKERRQ(ierr); 2819ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 28204cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,yy,yy);CHKERRQ(ierr); 2821f4a53059SBarry Smith PetscFunctionReturn(0); 2822f4a53059SBarry Smith } 2823f4a53059SBarry Smith 2824dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 28254cb9d9b8SBarry Smith { 28264cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2827dfbe8321SBarry Smith PetscErrorCode ierr; 2828b24ad042SBarry Smith 28294cb9d9b8SBarry Smith PetscFunctionBegin; 28304cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 28314cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->multtranspose)(b->AIJ,xx,yy);CHKERRQ(ierr); 2832ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,b->w,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 2833ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,b->w,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 28344cb9d9b8SBarry Smith PetscFunctionReturn(0); 28354cb9d9b8SBarry Smith } 28364cb9d9b8SBarry Smith 2837dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 28384cb9d9b8SBarry Smith { 28394cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2840dfbe8321SBarry Smith PetscErrorCode ierr; 28414cb9d9b8SBarry Smith 2842b24ad042SBarry Smith PetscFunctionBegin; 28434cb9d9b8SBarry Smith /* start the scatter */ 2844ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2845d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 2846ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,xx,b->w,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 2847717f2ec8SHong Zhang ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,zz,zz);CHKERRQ(ierr); 28484cb9d9b8SBarry Smith PetscFunctionReturn(0); 28494cb9d9b8SBarry Smith } 28504cb9d9b8SBarry Smith 2851dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 28524cb9d9b8SBarry Smith { 28534cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 2854dfbe8321SBarry Smith PetscErrorCode ierr; 2855b24ad042SBarry Smith 28564cb9d9b8SBarry Smith PetscFunctionBegin; 28574cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 2858ca9f406cSSatish Balay ierr = VecScatterBegin(b->ctx,b->w,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 2859d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multtransposeadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 2860ca9f406cSSatish Balay ierr = VecScatterEnd(b->ctx,b->w,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr); 28614cb9d9b8SBarry Smith PetscFunctionReturn(0); 28624cb9d9b8SBarry Smith } 28634cb9d9b8SBarry Smith 286495ddefa2SHong Zhang /* ----------------------------------------------------------------*/ 28657ba1a0bfSKris Buschelman PetscErrorCode MatPtAPSymbolic_SeqAIJ_SeqMAIJ(Mat A,Mat PP,PetscReal fill,Mat *C) 28667ba1a0bfSKris Buschelman { 28677ba1a0bfSKris Buschelman PetscErrorCode ierr; 28680298fd71SBarry Smith PetscFreeSpaceList free_space=NULL,current_space=NULL; 28697ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp =(Mat_SeqMAIJ*)PP->data; 28707ba1a0bfSKris Buschelman Mat P =pp->AIJ; 28717ba1a0bfSKris Buschelman Mat_SeqAIJ *a =(Mat_SeqAIJ*)A->data,*p=(Mat_SeqAIJ*)P->data,*c; 2872d2840e09SBarry Smith PetscInt *pti,*ptj,*ptJ; 28737ba1a0bfSKris Buschelman PetscInt *ci,*cj,*ptadenserow,*ptasparserow,*denserow,*sparserow,*ptaj; 2874d2840e09SBarry Smith const PetscInt an=A->cmap->N,am=A->rmap->N,pn=P->cmap->N,pm=P->rmap->N,ppdof=pp->dof; 2875d2840e09SBarry Smith PetscInt i,j,k,dof,pshift,ptnzi,arow,anzj,ptanzi,prow,pnzj,cnzi,cn; 28767ba1a0bfSKris Buschelman MatScalar *ca; 2877d2840e09SBarry Smith const PetscInt *pi = p->i,*pj = p->j,*pjj,*ai=a->i,*aj=a->j,*ajj; 28787ba1a0bfSKris Buschelman 28797ba1a0bfSKris Buschelman PetscFunctionBegin; 28807ba1a0bfSKris Buschelman /* Get ij structure of P^T */ 28817ba1a0bfSKris Buschelman ierr = MatGetSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 28827ba1a0bfSKris Buschelman 28837ba1a0bfSKris Buschelman cn = pn*ppdof; 28847ba1a0bfSKris Buschelman /* Allocate ci array, arrays for fill computation and */ 28857ba1a0bfSKris Buschelman /* free space for accumulating nonzero column info */ 2886854ce69bSBarry Smith ierr = PetscMalloc1(cn+1,&ci);CHKERRQ(ierr); 28877ba1a0bfSKris Buschelman ci[0] = 0; 28887ba1a0bfSKris Buschelman 28897ba1a0bfSKris Buschelman /* Work arrays for rows of P^T*A */ 2890dcca6d9dSJed Brown ierr = PetscMalloc4(an,&ptadenserow,an,&ptasparserow,cn,&denserow,cn,&sparserow);CHKERRQ(ierr); 2891c43dabc9SBarry Smith ierr = PetscMemzero(ptadenserow,an*sizeof(PetscInt));CHKERRQ(ierr); 2892c43dabc9SBarry Smith ierr = PetscMemzero(denserow,cn*sizeof(PetscInt));CHKERRQ(ierr); 28937ba1a0bfSKris Buschelman 28947ba1a0bfSKris Buschelman /* Set initial free space to be nnz(A) scaled by aspect ratio of P. */ 28957ba1a0bfSKris Buschelman /* This should be reasonable if sparsity of PtAP is similar to that of A. */ 28967ba1a0bfSKris Buschelman /* Note, aspect ratio of P is the same as the aspect ratio of SeqAIJ inside P */ 2897f91af8c7SBarry Smith ierr = PetscFreeSpaceGet(PetscIntMultTruncate(ai[am]/pm,pn),&free_space);CHKERRQ(ierr); 28987ba1a0bfSKris Buschelman current_space = free_space; 28997ba1a0bfSKris Buschelman 29007ba1a0bfSKris Buschelman /* Determine symbolic info for each row of C: */ 29017ba1a0bfSKris Buschelman for (i=0; i<pn; i++) { 29027ba1a0bfSKris Buschelman ptnzi = pti[i+1] - pti[i]; 29037ba1a0bfSKris Buschelman ptJ = ptj + pti[i]; 29047ba1a0bfSKris Buschelman for (dof=0; dof<ppdof; dof++) { 29057ba1a0bfSKris Buschelman ptanzi = 0; 29067ba1a0bfSKris Buschelman /* Determine symbolic row of PtA: */ 29077ba1a0bfSKris Buschelman for (j=0; j<ptnzi; j++) { 29087ba1a0bfSKris Buschelman /* Expand ptJ[j] by block size and shift by dof to get the right row of A */ 29097ba1a0bfSKris Buschelman arow = ptJ[j]*ppdof + dof; 29107ba1a0bfSKris Buschelman /* Nonzeros of P^T*A will be in same locations as any element of A in that row */ 29117ba1a0bfSKris Buschelman anzj = ai[arow+1] - ai[arow]; 29127ba1a0bfSKris Buschelman ajj = aj + ai[arow]; 29137ba1a0bfSKris Buschelman for (k=0; k<anzj; k++) { 29147ba1a0bfSKris Buschelman if (!ptadenserow[ajj[k]]) { 29157ba1a0bfSKris Buschelman ptadenserow[ajj[k]] = -1; 29167ba1a0bfSKris Buschelman ptasparserow[ptanzi++] = ajj[k]; 29177ba1a0bfSKris Buschelman } 29187ba1a0bfSKris Buschelman } 29197ba1a0bfSKris Buschelman } 29207ba1a0bfSKris Buschelman /* Using symbolic info for row of PtA, determine symbolic info for row of C: */ 29217ba1a0bfSKris Buschelman ptaj = ptasparserow; 29227ba1a0bfSKris Buschelman cnzi = 0; 29237ba1a0bfSKris Buschelman for (j=0; j<ptanzi; j++) { 29247ba1a0bfSKris Buschelman /* Get offset within block of P */ 29257ba1a0bfSKris Buschelman pshift = *ptaj%ppdof; 29267ba1a0bfSKris Buschelman /* Get block row of P */ 29277ba1a0bfSKris Buschelman prow = (*ptaj++)/ppdof; /* integer division */ 29287ba1a0bfSKris Buschelman /* P has same number of nonzeros per row as the compressed form */ 29297ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 29307ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 29317ba1a0bfSKris Buschelman for (k=0;k<pnzj;k++) { 29327ba1a0bfSKris Buschelman /* Locations in C are shifted by the offset within the block */ 29337ba1a0bfSKris Buschelman /* Note: we cannot use PetscLLAdd here because of the additional offset for the write location */ 29347ba1a0bfSKris Buschelman if (!denserow[pjj[k]*ppdof+pshift]) { 29357ba1a0bfSKris Buschelman denserow[pjj[k]*ppdof+pshift] = -1; 29367ba1a0bfSKris Buschelman sparserow[cnzi++] = pjj[k]*ppdof+pshift; 29377ba1a0bfSKris Buschelman } 29387ba1a0bfSKris Buschelman } 29397ba1a0bfSKris Buschelman } 29407ba1a0bfSKris Buschelman 29417ba1a0bfSKris Buschelman /* sort sparserow */ 29427ba1a0bfSKris Buschelman ierr = PetscSortInt(cnzi,sparserow);CHKERRQ(ierr); 29437ba1a0bfSKris Buschelman 29447ba1a0bfSKris Buschelman /* If free space is not available, make more free space */ 29457ba1a0bfSKris Buschelman /* Double the amount of total space in the list */ 29467ba1a0bfSKris Buschelman if (current_space->local_remaining<cnzi) { 2947f91af8c7SBarry Smith ierr = PetscFreeSpaceGet(PetscIntSumTruncate(cnzi,current_space->total_array_size),¤t_space);CHKERRQ(ierr); 29487ba1a0bfSKris Buschelman } 29497ba1a0bfSKris Buschelman 29507ba1a0bfSKris Buschelman /* Copy data into free space, and zero out denserows */ 29517ba1a0bfSKris Buschelman ierr = PetscMemcpy(current_space->array,sparserow,cnzi*sizeof(PetscInt));CHKERRQ(ierr); 295226fbe8dcSKarl Rupp 29537ba1a0bfSKris Buschelman current_space->array += cnzi; 29547ba1a0bfSKris Buschelman current_space->local_used += cnzi; 29557ba1a0bfSKris Buschelman current_space->local_remaining -= cnzi; 29567ba1a0bfSKris Buschelman 295726fbe8dcSKarl Rupp for (j=0; j<ptanzi; j++) ptadenserow[ptasparserow[j]] = 0; 295826fbe8dcSKarl Rupp for (j=0; j<cnzi; j++) denserow[sparserow[j]] = 0; 295926fbe8dcSKarl Rupp 29607ba1a0bfSKris Buschelman /* Aside: Perhaps we should save the pta info for the numerical factorization. */ 29617ba1a0bfSKris Buschelman /* For now, we will recompute what is needed. */ 29627ba1a0bfSKris Buschelman ci[i*ppdof+1+dof] = ci[i*ppdof+dof] + cnzi; 29637ba1a0bfSKris Buschelman } 29647ba1a0bfSKris Buschelman } 29657ba1a0bfSKris Buschelman /* nnz is now stored in ci[ptm], column indices are in the list of free space */ 29667ba1a0bfSKris Buschelman /* Allocate space for cj, initialize cj, and */ 29677ba1a0bfSKris Buschelman /* destroy list of free space and other temporary array(s) */ 2968854ce69bSBarry Smith ierr = PetscMalloc1(ci[cn]+1,&cj);CHKERRQ(ierr); 2969a1a86e44SBarry Smith ierr = PetscFreeSpaceContiguous(&free_space,cj);CHKERRQ(ierr); 297074ed9c26SBarry Smith ierr = PetscFree4(ptadenserow,ptasparserow,denserow,sparserow);CHKERRQ(ierr); 29717ba1a0bfSKris Buschelman 29727ba1a0bfSKris Buschelman /* Allocate space for ca */ 2973854ce69bSBarry Smith ierr = PetscCalloc1(ci[cn]+1,&ca);CHKERRQ(ierr); 29747ba1a0bfSKris Buschelman 29757ba1a0bfSKris Buschelman /* put together the new matrix */ 2976ce94432eSBarry Smith ierr = MatCreateSeqAIJWithArrays(PetscObjectComm((PetscObject)A),cn,cn,ci,cj,ca,C);CHKERRQ(ierr); 2977f27682edSJed Brown ierr = MatSetBlockSize(*C,pp->dof);CHKERRQ(ierr); 29787ba1a0bfSKris Buschelman 29797ba1a0bfSKris Buschelman /* MatCreateSeqAIJWithArrays flags matrix so PETSc doesn't free the user's arrays. */ 29807ba1a0bfSKris Buschelman /* Since these are PETSc arrays, change flags to free them as necessary. */ 29817ba1a0bfSKris Buschelman c = (Mat_SeqAIJ*)((*C)->data); 2982e6b907acSBarry Smith c->free_a = PETSC_TRUE; 2983e6b907acSBarry Smith c->free_ij = PETSC_TRUE; 29847ba1a0bfSKris Buschelman c->nonew = 0; 298526fbe8dcSKarl Rupp 2986d76021d8SHong Zhang (*C)->ops->ptapnumeric = MatPtAPNumeric_SeqAIJ_SeqMAIJ; 29877ba1a0bfSKris Buschelman 29887ba1a0bfSKris Buschelman /* Clean up. */ 29897ba1a0bfSKris Buschelman ierr = MatRestoreSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 29907ba1a0bfSKris Buschelman PetscFunctionReturn(0); 29917ba1a0bfSKris Buschelman } 29927ba1a0bfSKris Buschelman 29937ba1a0bfSKris Buschelman PetscErrorCode MatPtAPNumeric_SeqAIJ_SeqMAIJ(Mat A,Mat PP,Mat C) 29947ba1a0bfSKris Buschelman { 29957ba1a0bfSKris Buschelman /* This routine requires testing -- first draft only */ 29967ba1a0bfSKris Buschelman PetscErrorCode ierr; 29977ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp=(Mat_SeqMAIJ*)PP->data; 29987ba1a0bfSKris Buschelman Mat P =pp->AIJ; 29997ba1a0bfSKris Buschelman Mat_SeqAIJ *a = (Mat_SeqAIJ*) A->data; 30007ba1a0bfSKris Buschelman Mat_SeqAIJ *p = (Mat_SeqAIJ*) P->data; 30017ba1a0bfSKris Buschelman Mat_SeqAIJ *c = (Mat_SeqAIJ*) C->data; 3002a2ea699eSBarry Smith const PetscInt *ai=a->i,*aj=a->j,*pi=p->i,*pj=p->j,*pJ,*pjj; 3003d2840e09SBarry Smith const PetscInt *ci=c->i,*cj=c->j,*cjj; 3004d2840e09SBarry Smith const PetscInt am =A->rmap->N,cn=C->cmap->N,cm=C->rmap->N,ppdof=pp->dof; 3005d2840e09SBarry Smith PetscInt i,j,k,pshift,poffset,anzi,pnzi,apnzj,nextap,pnzj,prow,crow,*apj,*apjdense; 3006a2ea699eSBarry Smith const MatScalar *aa=a->a,*pa=p->a,*pA,*paj; 3007d2840e09SBarry Smith MatScalar *ca=c->a,*caj,*apa; 30087ba1a0bfSKris Buschelman 30097ba1a0bfSKris Buschelman PetscFunctionBegin; 30107ba1a0bfSKris Buschelman /* Allocate temporary array for storage of one row of A*P */ 30111795a4d1SJed Brown ierr = PetscCalloc3(cn,&apa,cn,&apj,cn,&apjdense);CHKERRQ(ierr); 30127ba1a0bfSKris Buschelman 30137ba1a0bfSKris Buschelman /* Clear old values in C */ 30147ba1a0bfSKris Buschelman ierr = PetscMemzero(ca,ci[cm]*sizeof(MatScalar));CHKERRQ(ierr); 30157ba1a0bfSKris Buschelman 30167ba1a0bfSKris Buschelman for (i=0; i<am; i++) { 30177ba1a0bfSKris Buschelman /* Form sparse row of A*P */ 30187ba1a0bfSKris Buschelman anzi = ai[i+1] - ai[i]; 30197ba1a0bfSKris Buschelman apnzj = 0; 30207ba1a0bfSKris Buschelman for (j=0; j<anzi; j++) { 30217ba1a0bfSKris Buschelman /* Get offset within block of P */ 30227ba1a0bfSKris Buschelman pshift = *aj%ppdof; 30237ba1a0bfSKris Buschelman /* Get block row of P */ 30247ba1a0bfSKris Buschelman prow = *aj++/ppdof; /* integer division */ 30257ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 30267ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 30277ba1a0bfSKris Buschelman paj = pa + pi[prow]; 30287ba1a0bfSKris Buschelman for (k=0; k<pnzj; k++) { 30297ba1a0bfSKris Buschelman poffset = pjj[k]*ppdof+pshift; 30307ba1a0bfSKris Buschelman if (!apjdense[poffset]) { 30317ba1a0bfSKris Buschelman apjdense[poffset] = -1; 30327ba1a0bfSKris Buschelman apj[apnzj++] = poffset; 30337ba1a0bfSKris Buschelman } 30347ba1a0bfSKris Buschelman apa[poffset] += (*aa)*paj[k]; 30357ba1a0bfSKris Buschelman } 3036dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*pnzj);CHKERRQ(ierr); 30377ba1a0bfSKris Buschelman aa++; 30387ba1a0bfSKris Buschelman } 30397ba1a0bfSKris Buschelman 30407ba1a0bfSKris Buschelman /* Sort the j index array for quick sparse axpy. */ 30417ba1a0bfSKris Buschelman /* Note: a array does not need sorting as it is in dense storage locations. */ 30427ba1a0bfSKris Buschelman ierr = PetscSortInt(apnzj,apj);CHKERRQ(ierr); 30437ba1a0bfSKris Buschelman 30447ba1a0bfSKris Buschelman /* Compute P^T*A*P using outer product (P^T)[:,j]*(A*P)[j,:]. */ 30457ba1a0bfSKris Buschelman prow = i/ppdof; /* integer division */ 30467ba1a0bfSKris Buschelman pshift = i%ppdof; 30477ba1a0bfSKris Buschelman poffset = pi[prow]; 30487ba1a0bfSKris Buschelman pnzi = pi[prow+1] - poffset; 30497ba1a0bfSKris Buschelman /* Reset pJ and pA so we can traverse the same row of P 'dof' times. */ 30507ba1a0bfSKris Buschelman pJ = pj+poffset; 30517ba1a0bfSKris Buschelman pA = pa+poffset; 30527ba1a0bfSKris Buschelman for (j=0; j<pnzi; j++) { 30537ba1a0bfSKris Buschelman crow = (*pJ)*ppdof+pshift; 30547ba1a0bfSKris Buschelman cjj = cj + ci[crow]; 30557ba1a0bfSKris Buschelman caj = ca + ci[crow]; 30567ba1a0bfSKris Buschelman pJ++; 30577ba1a0bfSKris Buschelman /* Perform sparse axpy operation. Note cjj includes apj. */ 30587ba1a0bfSKris Buschelman for (k=0,nextap=0; nextap<apnzj; k++) { 305926fbe8dcSKarl Rupp if (cjj[k] == apj[nextap]) caj[k] += (*pA)*apa[apj[nextap++]]; 30607ba1a0bfSKris Buschelman } 3061dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*apnzj);CHKERRQ(ierr); 30627ba1a0bfSKris Buschelman pA++; 30637ba1a0bfSKris Buschelman } 30647ba1a0bfSKris Buschelman 30657ba1a0bfSKris Buschelman /* Zero the current row info for A*P */ 30667ba1a0bfSKris Buschelman for (j=0; j<apnzj; j++) { 30677ba1a0bfSKris Buschelman apa[apj[j]] = 0.; 30687ba1a0bfSKris Buschelman apjdense[apj[j]] = 0; 30697ba1a0bfSKris Buschelman } 30707ba1a0bfSKris Buschelman } 30717ba1a0bfSKris Buschelman 30727ba1a0bfSKris Buschelman /* Assemble the final matrix and clean up */ 30737ba1a0bfSKris Buschelman ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 30747ba1a0bfSKris Buschelman ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 307574ed9c26SBarry Smith ierr = PetscFree3(apa,apj,apjdense);CHKERRQ(ierr); 307695ddefa2SHong Zhang PetscFunctionReturn(0); 307795ddefa2SHong Zhang } 30787ba1a0bfSKris Buschelman 3079150d2497SBarry Smith PETSC_INTERN PetscErrorCode MatPtAP_SeqAIJ_SeqMAIJ(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C) 30802121bac1SHong Zhang { 30812121bac1SHong Zhang PetscErrorCode ierr; 30822121bac1SHong Zhang 30832121bac1SHong Zhang PetscFunctionBegin; 30842121bac1SHong Zhang if (scall == MAT_INITIAL_MATRIX) { 30853ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 30862121bac1SHong Zhang ierr = MatPtAPSymbolic_SeqAIJ_SeqMAIJ(A,P,fill,C);CHKERRQ(ierr); 30873ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 30882121bac1SHong Zhang } 30893ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 30902121bac1SHong Zhang ierr = MatPtAPNumeric_SeqAIJ_SeqMAIJ(A,P,*C);CHKERRQ(ierr); 30913ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 30922121bac1SHong Zhang PetscFunctionReturn(0); 30932121bac1SHong Zhang } 30942121bac1SHong Zhang 3095f7a08781SBarry Smith PetscErrorCode MatPtAPSymbolic_MPIAIJ_MPIMAIJ(Mat A,Mat PP,PetscReal fill,Mat *C) 309695ddefa2SHong Zhang { 309795ddefa2SHong Zhang PetscErrorCode ierr; 309895ddefa2SHong Zhang 309995ddefa2SHong Zhang PetscFunctionBegin; 310095ddefa2SHong Zhang /* MatPtAPSymbolic_MPIAIJ_MPIMAIJ() is not implemented yet. Convert PP to mpiaij format */ 3101511c6705SHong Zhang ierr = MatConvert(PP,MATMPIAIJ,MAT_INPLACE_MATRIX,&PP);CHKERRQ(ierr); 310295ddefa2SHong Zhang ierr =(*PP->ops->ptapsymbolic)(A,PP,fill,C);CHKERRQ(ierr); 310395ddefa2SHong Zhang PetscFunctionReturn(0); 310495ddefa2SHong Zhang } 310595ddefa2SHong Zhang 3106f7a08781SBarry Smith PetscErrorCode MatPtAPNumeric_MPIAIJ_MPIMAIJ(Mat A,Mat PP,Mat C) 310795ddefa2SHong Zhang { 310895ddefa2SHong Zhang PetscFunctionBegin; 3109e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MatPtAPNumeric is not implemented for MPIMAIJ matrix yet"); 31107ba1a0bfSKris Buschelman PetscFunctionReturn(0); 31117ba1a0bfSKris Buschelman } 31127ba1a0bfSKris Buschelman 3113150d2497SBarry Smith PETSC_INTERN PetscErrorCode MatPtAP_MPIAIJ_MPIMAIJ(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C) 31149e03dfbbSHong Zhang { 31159e03dfbbSHong Zhang PetscErrorCode ierr; 31169e03dfbbSHong Zhang 31179e03dfbbSHong Zhang PetscFunctionBegin; 31189e03dfbbSHong Zhang if (scall == MAT_INITIAL_MATRIX) { 31193ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 31209e03dfbbSHong Zhang ierr = MatPtAPSymbolic_MPIAIJ_MPIMAIJ(A,P,fill,C);CHKERRQ(ierr); 31213ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 31229e03dfbbSHong Zhang } 31233ff4c91cSHong Zhang ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 31249e03dfbbSHong Zhang ierr = ((*C)->ops->ptapnumeric)(A,P,*C);CHKERRQ(ierr); 31253ff4c91cSHong Zhang ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 31269e03dfbbSHong Zhang PetscFunctionReturn(0); 31279e03dfbbSHong Zhang } 31289e03dfbbSHong Zhang 3129cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_SeqMAIJ_SeqAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat) 31309c4fc4c7SBarry Smith { 31319c4fc4c7SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 3132ceb03754SKris Buschelman Mat a = b->AIJ,B; 31339c4fc4c7SBarry Smith Mat_SeqAIJ *aij = (Mat_SeqAIJ*)a->data; 31349c4fc4c7SBarry Smith PetscErrorCode ierr; 31350fd73130SBarry Smith PetscInt m,n,i,ncols,*ilen,nmax = 0,*icols,j,k,ii,dof = b->dof; 3136ba8c8a56SBarry Smith PetscInt *cols; 3137ba8c8a56SBarry Smith PetscScalar *vals; 31389c4fc4c7SBarry Smith 31399c4fc4c7SBarry Smith PetscFunctionBegin; 31409c4fc4c7SBarry Smith ierr = MatGetSize(a,&m,&n);CHKERRQ(ierr); 3141785e854fSJed Brown ierr = PetscMalloc1(dof*m,&ilen);CHKERRQ(ierr); 31429c4fc4c7SBarry Smith for (i=0; i<m; i++) { 31439c4fc4c7SBarry Smith nmax = PetscMax(nmax,aij->ilen[i]); 314426fbe8dcSKarl Rupp for (j=0; j<dof; j++) ilen[dof*i+j] = aij->ilen[i]; 31459c4fc4c7SBarry Smith } 3146ceb03754SKris Buschelman ierr = MatCreateSeqAIJ(PETSC_COMM_SELF,dof*m,dof*n,0,ilen,&B);CHKERRQ(ierr); 31479c4fc4c7SBarry Smith ierr = PetscFree(ilen);CHKERRQ(ierr); 3148785e854fSJed Brown ierr = PetscMalloc1(nmax,&icols);CHKERRQ(ierr); 31499c4fc4c7SBarry Smith ii = 0; 31509c4fc4c7SBarry Smith for (i=0; i<m; i++) { 3151ba8c8a56SBarry Smith ierr = MatGetRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 31520fd73130SBarry Smith for (j=0; j<dof; j++) { 315326fbe8dcSKarl Rupp for (k=0; k<ncols; k++) icols[k] = dof*cols[k]+j; 3154ceb03754SKris Buschelman ierr = MatSetValues_SeqAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 31559c4fc4c7SBarry Smith ii++; 31569c4fc4c7SBarry Smith } 3157ba8c8a56SBarry Smith ierr = MatRestoreRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 31589c4fc4c7SBarry Smith } 31599c4fc4c7SBarry Smith ierr = PetscFree(icols);CHKERRQ(ierr); 3160ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3161ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3162ceb03754SKris Buschelman 3163511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 316428be2f97SBarry Smith ierr = MatHeaderReplace(A,&B);CHKERRQ(ierr); 3165c3d102feSKris Buschelman } else { 3166ceb03754SKris Buschelman *newmat = B; 3167c3d102feSKris Buschelman } 31689c4fc4c7SBarry Smith PetscFunctionReturn(0); 31699c4fc4c7SBarry Smith } 31709c4fc4c7SBarry Smith 3171c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> 3172be1d678aSKris Buschelman 3173cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIMAIJ_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat) 31740fd73130SBarry Smith { 31750fd73130SBarry Smith Mat_MPIMAIJ *maij = (Mat_MPIMAIJ*)A->data; 3176ceb03754SKris Buschelman Mat MatAIJ = ((Mat_SeqMAIJ*)maij->AIJ->data)->AIJ,B; 31770fd73130SBarry Smith Mat MatOAIJ = ((Mat_SeqMAIJ*)maij->OAIJ->data)->AIJ; 31780fd73130SBarry Smith Mat_SeqAIJ *AIJ = (Mat_SeqAIJ*) MatAIJ->data; 31790fd73130SBarry Smith Mat_SeqAIJ *OAIJ =(Mat_SeqAIJ*) MatOAIJ->data; 31800fd73130SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ*) maij->A->data; 31810298fd71SBarry Smith PetscInt dof = maij->dof,i,j,*dnz = NULL,*onz = NULL,nmax = 0,onmax = 0; 31820298fd71SBarry Smith PetscInt *oicols = NULL,*icols = NULL,ncols,*cols = NULL,oncols,*ocols = NULL; 31830fd73130SBarry Smith PetscInt rstart,cstart,*garray,ii,k; 31840fd73130SBarry Smith PetscErrorCode ierr; 31850fd73130SBarry Smith PetscScalar *vals,*ovals; 31860fd73130SBarry Smith 31870fd73130SBarry Smith PetscFunctionBegin; 3188dcca6d9dSJed Brown ierr = PetscMalloc2(A->rmap->n,&dnz,A->rmap->n,&onz);CHKERRQ(ierr); 3189d0f46423SBarry Smith for (i=0; i<A->rmap->n/dof; i++) { 31900fd73130SBarry Smith nmax = PetscMax(nmax,AIJ->ilen[i]); 31910fd73130SBarry Smith onmax = PetscMax(onmax,OAIJ->ilen[i]); 31920fd73130SBarry Smith for (j=0; j<dof; j++) { 31930fd73130SBarry Smith dnz[dof*i+j] = AIJ->ilen[i]; 31940fd73130SBarry Smith onz[dof*i+j] = OAIJ->ilen[i]; 31950fd73130SBarry Smith } 31960fd73130SBarry Smith } 3197ce94432eSBarry Smith ierr = MatCreateAIJ(PetscObjectComm((PetscObject)A),A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N,0,dnz,0,onz,&B);CHKERRQ(ierr); 3198f27682edSJed Brown ierr = MatSetBlockSize(B,dof);CHKERRQ(ierr); 31990fd73130SBarry Smith ierr = PetscFree2(dnz,onz);CHKERRQ(ierr); 32000fd73130SBarry Smith 3201dcca6d9dSJed Brown ierr = PetscMalloc2(nmax,&icols,onmax,&oicols);CHKERRQ(ierr); 3202d0f46423SBarry Smith rstart = dof*maij->A->rmap->rstart; 3203d0f46423SBarry Smith cstart = dof*maij->A->cmap->rstart; 32040fd73130SBarry Smith garray = mpiaij->garray; 32050fd73130SBarry Smith 32060fd73130SBarry Smith ii = rstart; 3207d0f46423SBarry Smith for (i=0; i<A->rmap->n/dof; i++) { 32080fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 32090fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 32100fd73130SBarry Smith for (j=0; j<dof; j++) { 32110fd73130SBarry Smith for (k=0; k<ncols; k++) { 32120fd73130SBarry Smith icols[k] = cstart + dof*cols[k]+j; 32130fd73130SBarry Smith } 32140fd73130SBarry Smith for (k=0; k<oncols; k++) { 32150fd73130SBarry Smith oicols[k] = dof*garray[ocols[k]]+j; 32160fd73130SBarry Smith } 3217ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 3218ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,oncols,oicols,ovals,INSERT_VALUES);CHKERRQ(ierr); 32190fd73130SBarry Smith ii++; 32200fd73130SBarry Smith } 32210fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 32220fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 32230fd73130SBarry Smith } 32240fd73130SBarry Smith ierr = PetscFree2(icols,oicols);CHKERRQ(ierr); 32250fd73130SBarry Smith 3226ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3227ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3228ceb03754SKris Buschelman 3229511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 32307adad957SLisandro Dalcin PetscInt refct = ((PetscObject)A)->refct; /* save ((PetscObject)A)->refct */ 32317adad957SLisandro Dalcin ((PetscObject)A)->refct = 1; 323226fbe8dcSKarl Rupp 323328be2f97SBarry Smith ierr = MatHeaderReplace(A,&B);CHKERRQ(ierr); 323426fbe8dcSKarl Rupp 32357adad957SLisandro Dalcin ((PetscObject)A)->refct = refct; /* restore ((PetscObject)A)->refct */ 3236c3d102feSKris Buschelman } else { 3237ceb03754SKris Buschelman *newmat = B; 3238c3d102feSKris Buschelman } 32390fd73130SBarry Smith PetscFunctionReturn(0); 32400fd73130SBarry Smith } 32410fd73130SBarry Smith 32427dae84e0SHong Zhang PetscErrorCode MatCreateSubMatrix_MAIJ(Mat mat,IS isrow,IS iscol,MatReuse cll,Mat *newmat) 32439e516c8fSBarry Smith { 32449e516c8fSBarry Smith PetscErrorCode ierr; 32459e516c8fSBarry Smith Mat A; 32469e516c8fSBarry Smith 32479e516c8fSBarry Smith PetscFunctionBegin; 32489e516c8fSBarry Smith ierr = MatConvert(mat,MATAIJ,MAT_INITIAL_MATRIX,&A);CHKERRQ(ierr); 32497dae84e0SHong Zhang ierr = MatCreateSubMatrix(A,isrow,iscol,cll,newmat);CHKERRQ(ierr); 32509e516c8fSBarry Smith ierr = MatDestroy(&A);CHKERRQ(ierr); 32519e516c8fSBarry Smith PetscFunctionReturn(0); 32529e516c8fSBarry Smith } 32530fd73130SBarry Smith 3254bcc973b7SBarry Smith /* ---------------------------------------------------------------------------------- */ 3255480dffcfSJed Brown /*@ 32560bad9183SKris Buschelman MatCreateMAIJ - Creates a matrix type providing restriction and interpolation 32570bad9183SKris Buschelman operations for multicomponent problems. It interpolates each component the same 32580bad9183SKris Buschelman way independently. The matrix type is based on MATSEQAIJ for sequential matrices, 32590bad9183SKris Buschelman and MATMPIAIJ for distributed matrices. 32600bad9183SKris Buschelman 3261ff585edeSJed Brown Collective 3262ff585edeSJed Brown 3263ff585edeSJed Brown Input Parameters: 3264ff585edeSJed Brown + A - the AIJ matrix describing the action on blocks 3265ff585edeSJed Brown - dof - the block size (number of components per node) 3266ff585edeSJed Brown 3267ff585edeSJed Brown Output Parameter: 3268ff585edeSJed Brown . maij - the new MAIJ matrix 3269ff585edeSJed Brown 32700bad9183SKris Buschelman Operations provided: 32710fd73130SBarry Smith + MatMult 32720bad9183SKris Buschelman . MatMultTranspose 32730bad9183SKris Buschelman . MatMultAdd 32740bad9183SKris Buschelman . MatMultTransposeAdd 32750fd73130SBarry Smith - MatView 32760bad9183SKris Buschelman 32770bad9183SKris Buschelman Level: advanced 32780bad9183SKris Buschelman 3279b409243cSBarry Smith .seealso: MatMAIJGetAIJ(), MatMAIJRedimension(), MATMAIJ 3280ff585edeSJed Brown @*/ 32817087cfbeSBarry Smith PetscErrorCode MatCreateMAIJ(Mat A,PetscInt dof,Mat *maij) 328282b1193eSBarry Smith { 3283dfbe8321SBarry Smith PetscErrorCode ierr; 3284b24ad042SBarry Smith PetscMPIInt size; 3285b24ad042SBarry Smith PetscInt n; 328682b1193eSBarry Smith Mat B; 328782b1193eSBarry Smith 328882b1193eSBarry Smith PetscFunctionBegin; 3289d72c5c08SBarry Smith ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); 3290d72c5c08SBarry Smith 329126fbe8dcSKarl Rupp if (dof == 1) *maij = A; 329226fbe8dcSKarl Rupp else { 3293ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 3294d0f46423SBarry Smith ierr = MatSetSizes(B,dof*A->rmap->n,dof*A->cmap->n,dof*A->rmap->N,dof*A->cmap->N);CHKERRQ(ierr); 3295bccba955SJed Brown ierr = PetscLayoutSetBlockSize(B->rmap,dof);CHKERRQ(ierr); 3296bccba955SJed Brown ierr = PetscLayoutSetBlockSize(B->cmap,dof);CHKERRQ(ierr); 3297bccba955SJed Brown ierr = PetscLayoutSetUp(B->rmap);CHKERRQ(ierr); 3298bccba955SJed Brown ierr = PetscLayoutSetUp(B->cmap);CHKERRQ(ierr); 329926fbe8dcSKarl Rupp 3300cd3bbe55SBarry Smith B->assembled = PETSC_TRUE; 3301d72c5c08SBarry Smith 3302ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 3303f4a53059SBarry Smith if (size == 1) { 3304feb9fe23SJed Brown Mat_SeqMAIJ *b; 3305feb9fe23SJed Brown 3306b9b97703SBarry Smith ierr = MatSetType(B,MATSEQMAIJ);CHKERRQ(ierr); 330726fbe8dcSKarl Rupp 33080298fd71SBarry Smith B->ops->setup = NULL; 33094cb9d9b8SBarry Smith B->ops->destroy = MatDestroy_SeqMAIJ; 33100fd73130SBarry Smith B->ops->view = MatView_SeqMAIJ; 3311feb9fe23SJed Brown b = (Mat_SeqMAIJ*)B->data; 3312b9b97703SBarry Smith b->dof = dof; 33134cb9d9b8SBarry Smith b->AIJ = A; 331426fbe8dcSKarl Rupp 3315d72c5c08SBarry Smith if (dof == 2) { 3316cd3bbe55SBarry Smith B->ops->mult = MatMult_SeqMAIJ_2; 3317cd3bbe55SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_2; 3318cd3bbe55SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_2; 3319cd3bbe55SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_2; 3320bcc973b7SBarry Smith } else if (dof == 3) { 3321bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_3; 3322bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_3; 3323bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_3; 3324bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_3; 3325bcc973b7SBarry Smith } else if (dof == 4) { 3326bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_4; 3327bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_4; 3328bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_4; 3329bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_4; 3330f9fae5adSBarry Smith } else if (dof == 5) { 3331f9fae5adSBarry Smith B->ops->mult = MatMult_SeqMAIJ_5; 3332f9fae5adSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_5; 3333f9fae5adSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_5; 3334f9fae5adSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_5; 33356cd98798SBarry Smith } else if (dof == 6) { 33366cd98798SBarry Smith B->ops->mult = MatMult_SeqMAIJ_6; 33376cd98798SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_6; 33386cd98798SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_6; 33396cd98798SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_6; 3340ed8eea03SBarry Smith } else if (dof == 7) { 3341ed8eea03SBarry Smith B->ops->mult = MatMult_SeqMAIJ_7; 3342ed8eea03SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_7; 3343ed8eea03SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_7; 3344ed8eea03SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_7; 334566ed3db0SBarry Smith } else if (dof == 8) { 334666ed3db0SBarry Smith B->ops->mult = MatMult_SeqMAIJ_8; 334766ed3db0SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_8; 334866ed3db0SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_8; 334966ed3db0SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_8; 33502b692628SMatthew Knepley } else if (dof == 9) { 33512b692628SMatthew Knepley B->ops->mult = MatMult_SeqMAIJ_9; 33522b692628SMatthew Knepley B->ops->multadd = MatMultAdd_SeqMAIJ_9; 33532b692628SMatthew Knepley B->ops->multtranspose = MatMultTranspose_SeqMAIJ_9; 33542b692628SMatthew Knepley B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_9; 3355b9cda22cSBarry Smith } else if (dof == 10) { 3356b9cda22cSBarry Smith B->ops->mult = MatMult_SeqMAIJ_10; 3357b9cda22cSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_10; 3358b9cda22cSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_10; 3359b9cda22cSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_10; 3360dbdd7285SBarry Smith } else if (dof == 11) { 3361dbdd7285SBarry Smith B->ops->mult = MatMult_SeqMAIJ_11; 3362dbdd7285SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_11; 3363dbdd7285SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_11; 3364dbdd7285SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_11; 33652f7816d4SBarry Smith } else if (dof == 16) { 33662f7816d4SBarry Smith B->ops->mult = MatMult_SeqMAIJ_16; 33672f7816d4SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_16; 33682f7816d4SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_16; 33692f7816d4SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_16; 3370ed1c418cSBarry Smith } else if (dof == 18) { 3371ed1c418cSBarry Smith B->ops->mult = MatMult_SeqMAIJ_18; 3372ed1c418cSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_18; 3373ed1c418cSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_18; 3374ed1c418cSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_18; 337582b1193eSBarry Smith } else { 33766861f193SBarry Smith B->ops->mult = MatMult_SeqMAIJ_N; 33776861f193SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_N; 33786861f193SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_N; 33796861f193SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_N; 338082b1193eSBarry Smith } 3381bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_seqmaij_seqaij_C",MatConvert_SeqMAIJ_SeqAIJ);CHKERRQ(ierr); 3382bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaij_seqmaij_C",MatPtAP_SeqAIJ_SeqMAIJ);CHKERRQ(ierr); 338359e29146SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaijperm_seqmaij_C",MatPtAP_SeqAIJ_SeqMAIJ);CHKERRQ(ierr); 3384279e4bd4SRichard Tran Mills ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaijmkl_seqmaij_C",MatPtAP_SeqAIJ_SeqMAIJ);CHKERRQ(ierr); 3385f4a53059SBarry Smith } else { 3386f4a53059SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ*)A->data; 3387feb9fe23SJed Brown Mat_MPIMAIJ *b; 3388f4a53059SBarry Smith IS from,to; 3389f4a53059SBarry Smith Vec gvec; 3390f4a53059SBarry Smith 3391b9b97703SBarry Smith ierr = MatSetType(B,MATMPIMAIJ);CHKERRQ(ierr); 339226fbe8dcSKarl Rupp 33930298fd71SBarry Smith B->ops->setup = NULL; 3394d72c5c08SBarry Smith B->ops->destroy = MatDestroy_MPIMAIJ; 33950fd73130SBarry Smith B->ops->view = MatView_MPIMAIJ; 339626fbe8dcSKarl Rupp 3397b9b97703SBarry Smith b = (Mat_MPIMAIJ*)B->data; 3398b9b97703SBarry Smith b->dof = dof; 3399b9b97703SBarry Smith b->A = A; 340026fbe8dcSKarl Rupp 34014cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->A,dof,&b->AIJ);CHKERRQ(ierr); 34024cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->B,dof,&b->OAIJ);CHKERRQ(ierr); 34034cb9d9b8SBarry Smith 3404f4a53059SBarry Smith ierr = VecGetSize(mpiaij->lvec,&n);CHKERRQ(ierr); 3405a34bdc0bSBarry Smith ierr = VecCreate(PETSC_COMM_SELF,&b->w);CHKERRQ(ierr); 3406a34bdc0bSBarry Smith ierr = VecSetSizes(b->w,n*dof,n*dof);CHKERRQ(ierr); 340713288a74SBarry Smith ierr = VecSetBlockSize(b->w,dof);CHKERRQ(ierr); 3408a34bdc0bSBarry Smith ierr = VecSetType(b->w,VECSEQ);CHKERRQ(ierr); 3409f4a53059SBarry Smith 3410f4a53059SBarry Smith /* create two temporary Index sets for build scatter gather */ 3411ce94432eSBarry Smith ierr = ISCreateBlock(PetscObjectComm((PetscObject)A),dof,n,mpiaij->garray,PETSC_COPY_VALUES,&from);CHKERRQ(ierr); 3412f4a53059SBarry Smith ierr = ISCreateStride(PETSC_COMM_SELF,n*dof,0,1,&to);CHKERRQ(ierr); 3413f4a53059SBarry Smith 3414f4a53059SBarry Smith /* create temporary global vector to generate scatter context */ 3415ce94432eSBarry Smith ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),dof,dof*A->cmap->n,dof*A->cmap->N,NULL,&gvec);CHKERRQ(ierr); 3416f4a53059SBarry Smith 3417f4a53059SBarry Smith /* generate the scatter context */ 3418f4a53059SBarry Smith ierr = VecScatterCreate(gvec,from,b->w,to,&b->ctx);CHKERRQ(ierr); 3419f4a53059SBarry Smith 34206bf464f9SBarry Smith ierr = ISDestroy(&from);CHKERRQ(ierr); 34216bf464f9SBarry Smith ierr = ISDestroy(&to);CHKERRQ(ierr); 34226bf464f9SBarry Smith ierr = VecDestroy(&gvec);CHKERRQ(ierr); 3423f4a53059SBarry Smith 3424f4a53059SBarry Smith B->ops->mult = MatMult_MPIMAIJ_dof; 34254cb9d9b8SBarry Smith B->ops->multtranspose = MatMultTranspose_MPIMAIJ_dof; 34264cb9d9b8SBarry Smith B->ops->multadd = MatMultAdd_MPIMAIJ_dof; 34274cb9d9b8SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_MPIMAIJ_dof; 342826fbe8dcSKarl Rupp 3429bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpimaij_mpiaij_C",MatConvert_MPIMAIJ_MPIAIJ);CHKERRQ(ierr); 3430bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_mpiaij_mpimaij_C",MatPtAP_MPIAIJ_MPIMAIJ);CHKERRQ(ierr); 3431f4a53059SBarry Smith } 34327dae84e0SHong Zhang B->ops->createsubmatrix = MatCreateSubMatrix_MAIJ; 34334994cf47SJed Brown ierr = MatSetUp(B);CHKERRQ(ierr); 3434cd3bbe55SBarry Smith *maij = B; 3435146574abSBarry Smith ierr = MatViewFromOptions(B,NULL,"-mat_view");CHKERRQ(ierr); 3436d72c5c08SBarry Smith } 343782b1193eSBarry Smith PetscFunctionReturn(0); 343882b1193eSBarry Smith } 3439