182b1193eSBarry Smith /* 2cd3bbe55SBarry Smith Defines the basic matrix operations for the MAIJ matrix storage format. 3cd3bbe55SBarry Smith This format is used for restriction and interpolation operations for 4cd3bbe55SBarry Smith multicomponent problems. It interpolates each component the same way 5cd3bbe55SBarry Smith independently. 6cd3bbe55SBarry Smith 7cd3bbe55SBarry Smith We provide: 8cd3bbe55SBarry Smith MatMult() 9cd3bbe55SBarry Smith MatMultTranspose() 10cd3bbe55SBarry Smith MatMultTransposeAdd() 11cd3bbe55SBarry Smith MatMultAdd() 12cd3bbe55SBarry Smith and 13cd3bbe55SBarry Smith MatCreateMAIJ(Mat,dof,Mat*) 14f4a53059SBarry Smith 15f4a53059SBarry Smith This single directory handles both the sequential and parallel codes 1682b1193eSBarry Smith */ 1782b1193eSBarry Smith 18be911618SKris Buschelman #include "src/mat/impls/maij/maij.h" 197ba1a0bfSKris Buschelman #include "src/mat/utils/freespace.h" 203c94ec11SBarry Smith #include "vecimpl.h" 2182b1193eSBarry Smith 224a2ae208SSatish Balay #undef __FUNCT__ 234a2ae208SSatish Balay #define __FUNCT__ "MatMAIJGetAIJ" 24dfbe8321SBarry Smith PetscErrorCode MatMAIJGetAIJ(Mat A,Mat *B) 25b9b97703SBarry Smith { 26dfbe8321SBarry Smith PetscErrorCode ierr; 27b9b97703SBarry Smith PetscTruth ismpimaij,isseqmaij; 28b9b97703SBarry Smith 29b9b97703SBarry Smith PetscFunctionBegin; 30b9b97703SBarry Smith ierr = PetscTypeCompare((PetscObject)A,MATMPIMAIJ,&ismpimaij);CHKERRQ(ierr); 31b9b97703SBarry Smith ierr = PetscTypeCompare((PetscObject)A,MATSEQMAIJ,&isseqmaij);CHKERRQ(ierr); 32b9b97703SBarry Smith if (ismpimaij) { 33b9b97703SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 34b9b97703SBarry Smith 35b9b97703SBarry Smith *B = b->A; 36b9b97703SBarry Smith } else if (isseqmaij) { 37b9b97703SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 38b9b97703SBarry Smith 39b9b97703SBarry Smith *B = b->AIJ; 40b9b97703SBarry Smith } else { 41b9b97703SBarry Smith *B = A; 42b9b97703SBarry Smith } 43b9b97703SBarry Smith PetscFunctionReturn(0); 44b9b97703SBarry Smith } 45b9b97703SBarry Smith 464a2ae208SSatish Balay #undef __FUNCT__ 474a2ae208SSatish Balay #define __FUNCT__ "MatMAIJRedimension" 48b24ad042SBarry Smith PetscErrorCode MatMAIJRedimension(Mat A,PetscInt dof,Mat *B) 49b9b97703SBarry Smith { 50dfbe8321SBarry Smith PetscErrorCode ierr; 51b9b97703SBarry Smith Mat Aij; 52b9b97703SBarry Smith 53b9b97703SBarry Smith PetscFunctionBegin; 54b9b97703SBarry Smith ierr = MatMAIJGetAIJ(A,&Aij);CHKERRQ(ierr); 55b9b97703SBarry Smith ierr = MatCreateMAIJ(Aij,dof,B);CHKERRQ(ierr); 56b9b97703SBarry Smith PetscFunctionReturn(0); 57b9b97703SBarry Smith } 58b9b97703SBarry Smith 594a2ae208SSatish Balay #undef __FUNCT__ 604a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_SeqMAIJ" 61dfbe8321SBarry Smith PetscErrorCode MatDestroy_SeqMAIJ(Mat A) 6282b1193eSBarry Smith { 63dfbe8321SBarry Smith PetscErrorCode ierr; 644cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 6582b1193eSBarry Smith 6682b1193eSBarry Smith PetscFunctionBegin; 67cd3bbe55SBarry Smith if (b->AIJ) { 68cd3bbe55SBarry Smith ierr = MatDestroy(b->AIJ);CHKERRQ(ierr); 6982b1193eSBarry Smith } 704cb9d9b8SBarry Smith ierr = PetscFree(b);CHKERRQ(ierr); 714cb9d9b8SBarry Smith PetscFunctionReturn(0); 724cb9d9b8SBarry Smith } 734cb9d9b8SBarry Smith 744a2ae208SSatish Balay #undef __FUNCT__ 750fd73130SBarry Smith #define __FUNCT__ "MatView_SeqMAIJ" 760fd73130SBarry Smith PetscErrorCode MatView_SeqMAIJ(Mat A,PetscViewer viewer) 770fd73130SBarry Smith { 780fd73130SBarry Smith PetscErrorCode ierr; 790fd73130SBarry Smith Mat B; 800fd73130SBarry Smith 810fd73130SBarry Smith PetscFunctionBegin; 82ceb03754SKris Buschelman ierr = MatConvert(A,MATSEQAIJ,MAT_INITIAL_MATRIX,&B); 830fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 840fd73130SBarry Smith ierr = MatDestroy(B);CHKERRQ(ierr); 850fd73130SBarry Smith PetscFunctionReturn(0); 860fd73130SBarry Smith } 870fd73130SBarry Smith 880fd73130SBarry Smith #undef __FUNCT__ 890fd73130SBarry Smith #define __FUNCT__ "MatView_MPIMAIJ" 900fd73130SBarry Smith PetscErrorCode MatView_MPIMAIJ(Mat A,PetscViewer viewer) 910fd73130SBarry Smith { 920fd73130SBarry Smith PetscErrorCode ierr; 930fd73130SBarry Smith Mat B; 940fd73130SBarry Smith 950fd73130SBarry Smith PetscFunctionBegin; 96ceb03754SKris Buschelman ierr = MatConvert(A,MATMPIAIJ,MAT_INITIAL_MATRIX,&B); 970fd73130SBarry Smith ierr = MatView(B,viewer);CHKERRQ(ierr); 980fd73130SBarry Smith ierr = MatDestroy(B);CHKERRQ(ierr); 990fd73130SBarry Smith PetscFunctionReturn(0); 1000fd73130SBarry Smith } 1010fd73130SBarry Smith 1020fd73130SBarry Smith #undef __FUNCT__ 1034a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_MPIMAIJ" 104dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIMAIJ(Mat A) 1054cb9d9b8SBarry Smith { 106dfbe8321SBarry Smith PetscErrorCode ierr; 1074cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1084cb9d9b8SBarry Smith 1094cb9d9b8SBarry Smith PetscFunctionBegin; 1104cb9d9b8SBarry Smith if (b->AIJ) { 1114cb9d9b8SBarry Smith ierr = MatDestroy(b->AIJ);CHKERRQ(ierr); 1124cb9d9b8SBarry Smith } 113f4a53059SBarry Smith if (b->OAIJ) { 114f4a53059SBarry Smith ierr = MatDestroy(b->OAIJ);CHKERRQ(ierr); 115f4a53059SBarry Smith } 116b9b97703SBarry Smith if (b->A) { 117b9b97703SBarry Smith ierr = MatDestroy(b->A);CHKERRQ(ierr); 118b9b97703SBarry Smith } 119f4a53059SBarry Smith if (b->ctx) { 120f4a53059SBarry Smith ierr = VecScatterDestroy(b->ctx);CHKERRQ(ierr); 121f4a53059SBarry Smith } 122f4a53059SBarry Smith if (b->w) { 123f4a53059SBarry Smith ierr = VecDestroy(b->w);CHKERRQ(ierr); 124f4a53059SBarry Smith } 125cd3bbe55SBarry Smith ierr = PetscFree(b);CHKERRQ(ierr); 126b9b97703SBarry Smith PetscFunctionReturn(0); 127b9b97703SBarry Smith } 128b9b97703SBarry Smith 1290bad9183SKris Buschelman /*MC 130fafad747SKris Buschelman MATMAIJ - MATMAIJ = "maij" - A matrix type to be used for restriction and interpolation operations for 1310bad9183SKris Buschelman multicomponent problems, interpolating or restricting each component the same way independently. 1320bad9183SKris Buschelman The matrix type is based on MATSEQAIJ for sequential matrices, and MATMPIAIJ for distributed matrices. 1330bad9183SKris Buschelman 1340bad9183SKris Buschelman Operations provided: 1350bad9183SKris Buschelman . MatMult 1360bad9183SKris Buschelman . MatMultTranspose 1370bad9183SKris Buschelman . MatMultAdd 1380bad9183SKris Buschelman . MatMultTransposeAdd 1390bad9183SKris Buschelman 1400bad9183SKris Buschelman Level: advanced 1410bad9183SKris Buschelman 1420bad9183SKris Buschelman .seealso: MatCreateSeqDense 1430bad9183SKris Buschelman M*/ 1440bad9183SKris Buschelman 14582b1193eSBarry Smith EXTERN_C_BEGIN 1464a2ae208SSatish Balay #undef __FUNCT__ 1474a2ae208SSatish Balay #define __FUNCT__ "MatCreate_MAIJ" 148dfbe8321SBarry Smith PetscErrorCode MatCreate_MAIJ(Mat A) 14982b1193eSBarry Smith { 150dfbe8321SBarry Smith PetscErrorCode ierr; 1514cb9d9b8SBarry Smith Mat_MPIMAIJ *b; 15282b1193eSBarry Smith 15382b1193eSBarry Smith PetscFunctionBegin; 154b0a32e0cSBarry Smith ierr = PetscNew(Mat_MPIMAIJ,&b);CHKERRQ(ierr); 155b0a32e0cSBarry Smith A->data = (void*)b; 156cd3bbe55SBarry Smith ierr = PetscMemzero(A->ops,sizeof(struct _MatOps));CHKERRQ(ierr); 157cd3bbe55SBarry Smith A->factor = 0; 158cd3bbe55SBarry Smith A->mapping = 0; 159f4a53059SBarry Smith 160cd3bbe55SBarry Smith b->AIJ = 0; 161cd3bbe55SBarry Smith b->dof = 0; 162f4a53059SBarry Smith b->OAIJ = 0; 163f4a53059SBarry Smith b->ctx = 0; 164f4a53059SBarry Smith b->w = 0; 16582b1193eSBarry Smith PetscFunctionReturn(0); 16682b1193eSBarry Smith } 16782b1193eSBarry Smith EXTERN_C_END 16882b1193eSBarry Smith 169cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 1704a2ae208SSatish Balay #undef __FUNCT__ 171b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_2" 172dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 17382b1193eSBarry Smith { 1744cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 175bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 17687828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2; 177dfbe8321SBarry Smith PetscErrorCode ierr; 178b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 179b24ad042SBarry Smith PetscInt n,i,jrow,j; 18082b1193eSBarry Smith 181bcc973b7SBarry Smith PetscFunctionBegin; 1821ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1831ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 184bcc973b7SBarry Smith idx = a->j; 185bcc973b7SBarry Smith v = a->a; 186bcc973b7SBarry Smith ii = a->i; 187bcc973b7SBarry Smith 188bcc973b7SBarry Smith for (i=0; i<m; i++) { 189bcc973b7SBarry Smith jrow = ii[i]; 190bcc973b7SBarry Smith n = ii[i+1] - jrow; 191bcc973b7SBarry Smith sum1 = 0.0; 192bcc973b7SBarry Smith sum2 = 0.0; 193bcc973b7SBarry Smith for (j=0; j<n; j++) { 194bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 195bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 196bcc973b7SBarry Smith jrow++; 197bcc973b7SBarry Smith } 198bcc973b7SBarry Smith y[2*i] = sum1; 199bcc973b7SBarry Smith y[2*i+1] = sum2; 200bcc973b7SBarry Smith } 201bcc973b7SBarry Smith 202b0a32e0cSBarry Smith PetscLogFlops(4*a->nz - 2*m); 2031ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2041ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 20582b1193eSBarry Smith PetscFunctionReturn(0); 20682b1193eSBarry Smith } 207bcc973b7SBarry Smith 2084a2ae208SSatish Balay #undef __FUNCT__ 209b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_2" 210dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_2(Mat A,Vec xx,Vec yy) 21182b1193eSBarry Smith { 2124cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 213bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 21487828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,zero = 0.0; 215dfbe8321SBarry Smith PetscErrorCode ierr; 216b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 21782b1193eSBarry Smith 218bcc973b7SBarry Smith PetscFunctionBegin; 219bcc973b7SBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 2201ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2211ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 222bfec09a0SHong Zhang 223bcc973b7SBarry Smith for (i=0; i<m; i++) { 224bfec09a0SHong Zhang idx = a->j + a->i[i] ; 225bfec09a0SHong Zhang v = a->a + a->i[i] ; 226bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 227bcc973b7SBarry Smith alpha1 = x[2*i]; 228bcc973b7SBarry Smith alpha2 = x[2*i+1]; 229bcc973b7SBarry Smith while (n-->0) {y[2*(*idx)] += alpha1*(*v); y[2*(*idx)+1] += alpha2*(*v); idx++; v++;} 230bcc973b7SBarry Smith } 231b0a32e0cSBarry Smith PetscLogFlops(4*a->nz - 2*b->AIJ->n); 2321ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2331ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 23482b1193eSBarry Smith PetscFunctionReturn(0); 23582b1193eSBarry Smith } 236bcc973b7SBarry Smith 2374a2ae208SSatish Balay #undef __FUNCT__ 238b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_2" 239dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 24082b1193eSBarry Smith { 2414cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 242bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 24387828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2; 244dfbe8321SBarry Smith PetscErrorCode ierr; 245b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 246b24ad042SBarry Smith PetscInt n,i,jrow,j; 24782b1193eSBarry Smith 248bcc973b7SBarry Smith PetscFunctionBegin; 249f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 2501ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2511ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 252bcc973b7SBarry Smith idx = a->j; 253bcc973b7SBarry Smith v = a->a; 254bcc973b7SBarry Smith ii = a->i; 255bcc973b7SBarry Smith 256bcc973b7SBarry Smith for (i=0; i<m; i++) { 257bcc973b7SBarry Smith jrow = ii[i]; 258bcc973b7SBarry Smith n = ii[i+1] - jrow; 259bcc973b7SBarry Smith sum1 = 0.0; 260bcc973b7SBarry Smith sum2 = 0.0; 261bcc973b7SBarry Smith for (j=0; j<n; j++) { 262bcc973b7SBarry Smith sum1 += v[jrow]*x[2*idx[jrow]]; 263bcc973b7SBarry Smith sum2 += v[jrow]*x[2*idx[jrow]+1]; 264bcc973b7SBarry Smith jrow++; 265bcc973b7SBarry Smith } 266bcc973b7SBarry Smith y[2*i] += sum1; 267bcc973b7SBarry Smith y[2*i+1] += sum2; 268bcc973b7SBarry Smith } 269bcc973b7SBarry Smith 270b0a32e0cSBarry Smith PetscLogFlops(4*a->nz - 2*m); 2711ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2721ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 273bcc973b7SBarry Smith PetscFunctionReturn(0); 27482b1193eSBarry Smith } 2754a2ae208SSatish Balay #undef __FUNCT__ 276b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_2" 277dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 27882b1193eSBarry Smith { 2794cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 280bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 28187828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2; 282dfbe8321SBarry Smith PetscErrorCode ierr; 283b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 28482b1193eSBarry Smith 285bcc973b7SBarry Smith PetscFunctionBegin; 286f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 2871ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2881ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 289bfec09a0SHong Zhang 290bcc973b7SBarry Smith for (i=0; i<m; i++) { 291bfec09a0SHong Zhang idx = a->j + a->i[i] ; 292bfec09a0SHong Zhang v = a->a + a->i[i] ; 293bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 294bcc973b7SBarry Smith alpha1 = x[2*i]; 295bcc973b7SBarry Smith alpha2 = x[2*i+1]; 296bcc973b7SBarry Smith while (n-->0) {y[2*(*idx)] += alpha1*(*v); y[2*(*idx)+1] += alpha2*(*v); idx++; v++;} 297bcc973b7SBarry Smith } 298b0a32e0cSBarry Smith PetscLogFlops(4*a->nz - 2*b->AIJ->n); 2991ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3001ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 301bcc973b7SBarry Smith PetscFunctionReturn(0); 30282b1193eSBarry Smith } 303cd3bbe55SBarry Smith /* --------------------------------------------------------------------------------------*/ 3044a2ae208SSatish Balay #undef __FUNCT__ 305b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_3" 306dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 307bcc973b7SBarry Smith { 3084cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 309bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 31087828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3; 311dfbe8321SBarry Smith PetscErrorCode ierr; 312b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 313b24ad042SBarry Smith PetscInt n,i,jrow,j; 31482b1193eSBarry Smith 315bcc973b7SBarry Smith PetscFunctionBegin; 3161ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3171ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 318bcc973b7SBarry Smith idx = a->j; 319bcc973b7SBarry Smith v = a->a; 320bcc973b7SBarry Smith ii = a->i; 321bcc973b7SBarry Smith 322bcc973b7SBarry Smith for (i=0; i<m; i++) { 323bcc973b7SBarry Smith jrow = ii[i]; 324bcc973b7SBarry Smith n = ii[i+1] - jrow; 325bcc973b7SBarry Smith sum1 = 0.0; 326bcc973b7SBarry Smith sum2 = 0.0; 327bcc973b7SBarry Smith sum3 = 0.0; 328bcc973b7SBarry Smith for (j=0; j<n; j++) { 329bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 330bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 331bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 332bcc973b7SBarry Smith jrow++; 333bcc973b7SBarry Smith } 334bcc973b7SBarry Smith y[3*i] = sum1; 335bcc973b7SBarry Smith y[3*i+1] = sum2; 336bcc973b7SBarry Smith y[3*i+2] = sum3; 337bcc973b7SBarry Smith } 338bcc973b7SBarry Smith 339b0a32e0cSBarry Smith PetscLogFlops(6*a->nz - 3*m); 3401ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3411ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 342bcc973b7SBarry Smith PetscFunctionReturn(0); 343bcc973b7SBarry Smith } 344bcc973b7SBarry Smith 3454a2ae208SSatish Balay #undef __FUNCT__ 346b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_3" 347dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_3(Mat A,Vec xx,Vec yy) 348bcc973b7SBarry Smith { 3494cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 350bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 35187828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,zero = 0.0; 352dfbe8321SBarry Smith PetscErrorCode ierr; 353b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 354bcc973b7SBarry Smith 355bcc973b7SBarry Smith PetscFunctionBegin; 356bcc973b7SBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 3571ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3581ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 359bfec09a0SHong Zhang 360bcc973b7SBarry Smith for (i=0; i<m; i++) { 361bfec09a0SHong Zhang idx = a->j + a->i[i]; 362bfec09a0SHong Zhang v = a->a + a->i[i]; 363bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 364bcc973b7SBarry Smith alpha1 = x[3*i]; 365bcc973b7SBarry Smith alpha2 = x[3*i+1]; 366bcc973b7SBarry Smith alpha3 = x[3*i+2]; 367bcc973b7SBarry Smith while (n-->0) { 368bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 369bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 370bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 371bcc973b7SBarry Smith idx++; v++; 372bcc973b7SBarry Smith } 373bcc973b7SBarry Smith } 374b0a32e0cSBarry Smith PetscLogFlops(6*a->nz - 3*b->AIJ->n); 3751ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3761ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 377bcc973b7SBarry Smith PetscFunctionReturn(0); 378bcc973b7SBarry Smith } 379bcc973b7SBarry Smith 3804a2ae208SSatish Balay #undef __FUNCT__ 381b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_3" 382dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 383bcc973b7SBarry Smith { 3844cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 385bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 38687828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3; 387dfbe8321SBarry Smith PetscErrorCode ierr; 388b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 389b24ad042SBarry Smith PetscInt n,i,jrow,j; 390bcc973b7SBarry Smith 391bcc973b7SBarry Smith PetscFunctionBegin; 392f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 3931ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3941ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 395bcc973b7SBarry Smith idx = a->j; 396bcc973b7SBarry Smith v = a->a; 397bcc973b7SBarry Smith ii = a->i; 398bcc973b7SBarry Smith 399bcc973b7SBarry Smith for (i=0; i<m; i++) { 400bcc973b7SBarry Smith jrow = ii[i]; 401bcc973b7SBarry Smith n = ii[i+1] - jrow; 402bcc973b7SBarry Smith sum1 = 0.0; 403bcc973b7SBarry Smith sum2 = 0.0; 404bcc973b7SBarry Smith sum3 = 0.0; 405bcc973b7SBarry Smith for (j=0; j<n; j++) { 406bcc973b7SBarry Smith sum1 += v[jrow]*x[3*idx[jrow]]; 407bcc973b7SBarry Smith sum2 += v[jrow]*x[3*idx[jrow]+1]; 408bcc973b7SBarry Smith sum3 += v[jrow]*x[3*idx[jrow]+2]; 409bcc973b7SBarry Smith jrow++; 410bcc973b7SBarry Smith } 411bcc973b7SBarry Smith y[3*i] += sum1; 412bcc973b7SBarry Smith y[3*i+1] += sum2; 413bcc973b7SBarry Smith y[3*i+2] += sum3; 414bcc973b7SBarry Smith } 415bcc973b7SBarry Smith 416b0a32e0cSBarry Smith PetscLogFlops(6*a->nz); 4171ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 4181ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 419bcc973b7SBarry Smith PetscFunctionReturn(0); 420bcc973b7SBarry Smith } 4214a2ae208SSatish Balay #undef __FUNCT__ 422b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_3" 423dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 424bcc973b7SBarry Smith { 4254cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 426bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 42787828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3; 428dfbe8321SBarry Smith PetscErrorCode ierr; 429b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 430bcc973b7SBarry Smith 431bcc973b7SBarry Smith PetscFunctionBegin; 432f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 4331ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 4341ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 435bcc973b7SBarry Smith for (i=0; i<m; i++) { 436bfec09a0SHong Zhang idx = a->j + a->i[i] ; 437bfec09a0SHong Zhang v = a->a + a->i[i] ; 438bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 439bcc973b7SBarry Smith alpha1 = x[3*i]; 440bcc973b7SBarry Smith alpha2 = x[3*i+1]; 441bcc973b7SBarry Smith alpha3 = x[3*i+2]; 442bcc973b7SBarry Smith while (n-->0) { 443bcc973b7SBarry Smith y[3*(*idx)] += alpha1*(*v); 444bcc973b7SBarry Smith y[3*(*idx)+1] += alpha2*(*v); 445bcc973b7SBarry Smith y[3*(*idx)+2] += alpha3*(*v); 446bcc973b7SBarry Smith idx++; v++; 447bcc973b7SBarry Smith } 448bcc973b7SBarry Smith } 449b0a32e0cSBarry Smith PetscLogFlops(6*a->nz); 4501ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 4511ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 452bcc973b7SBarry Smith PetscFunctionReturn(0); 453bcc973b7SBarry Smith } 454bcc973b7SBarry Smith 455bcc973b7SBarry Smith /* ------------------------------------------------------------------------------*/ 4564a2ae208SSatish Balay #undef __FUNCT__ 457b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_4" 458dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 459bcc973b7SBarry Smith { 4604cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 461bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 46287828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4; 463dfbe8321SBarry Smith PetscErrorCode ierr; 464b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 465b24ad042SBarry Smith PetscInt n,i,jrow,j; 466bcc973b7SBarry Smith 467bcc973b7SBarry Smith PetscFunctionBegin; 4681ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 4691ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 470bcc973b7SBarry Smith idx = a->j; 471bcc973b7SBarry Smith v = a->a; 472bcc973b7SBarry Smith ii = a->i; 473bcc973b7SBarry Smith 474bcc973b7SBarry Smith for (i=0; i<m; i++) { 475bcc973b7SBarry Smith jrow = ii[i]; 476bcc973b7SBarry Smith n = ii[i+1] - jrow; 477bcc973b7SBarry Smith sum1 = 0.0; 478bcc973b7SBarry Smith sum2 = 0.0; 479bcc973b7SBarry Smith sum3 = 0.0; 480bcc973b7SBarry Smith sum4 = 0.0; 481bcc973b7SBarry Smith for (j=0; j<n; j++) { 482bcc973b7SBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 483bcc973b7SBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 484bcc973b7SBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 485bcc973b7SBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 486bcc973b7SBarry Smith jrow++; 487bcc973b7SBarry Smith } 488bcc973b7SBarry Smith y[4*i] = sum1; 489bcc973b7SBarry Smith y[4*i+1] = sum2; 490bcc973b7SBarry Smith y[4*i+2] = sum3; 491bcc973b7SBarry Smith y[4*i+3] = sum4; 492bcc973b7SBarry Smith } 493bcc973b7SBarry Smith 494b0a32e0cSBarry Smith PetscLogFlops(8*a->nz - 4*m); 4951ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 4961ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 497bcc973b7SBarry Smith PetscFunctionReturn(0); 498bcc973b7SBarry Smith } 499bcc973b7SBarry Smith 5004a2ae208SSatish Balay #undef __FUNCT__ 501b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_4" 502dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_4(Mat A,Vec xx,Vec yy) 503bcc973b7SBarry Smith { 5044cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 505bcc973b7SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 50687828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,zero = 0.0; 507dfbe8321SBarry Smith PetscErrorCode ierr; 508b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 509bcc973b7SBarry Smith 510bcc973b7SBarry Smith PetscFunctionBegin; 511bcc973b7SBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 5121ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 5131ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 514bcc973b7SBarry Smith for (i=0; i<m; i++) { 515bfec09a0SHong Zhang idx = a->j + a->i[i] ; 516bfec09a0SHong Zhang v = a->a + a->i[i] ; 517bcc973b7SBarry Smith n = a->i[i+1] - a->i[i]; 518bcc973b7SBarry Smith alpha1 = x[4*i]; 519bcc973b7SBarry Smith alpha2 = x[4*i+1]; 520bcc973b7SBarry Smith alpha3 = x[4*i+2]; 521bcc973b7SBarry Smith alpha4 = x[4*i+3]; 522bcc973b7SBarry Smith while (n-->0) { 523bcc973b7SBarry Smith y[4*(*idx)] += alpha1*(*v); 524bcc973b7SBarry Smith y[4*(*idx)+1] += alpha2*(*v); 525bcc973b7SBarry Smith y[4*(*idx)+2] += alpha3*(*v); 526bcc973b7SBarry Smith y[4*(*idx)+3] += alpha4*(*v); 527bcc973b7SBarry Smith idx++; v++; 528bcc973b7SBarry Smith } 529bcc973b7SBarry Smith } 530b0a32e0cSBarry Smith PetscLogFlops(8*a->nz - 4*b->AIJ->n); 5311ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 5321ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 533bcc973b7SBarry Smith PetscFunctionReturn(0); 534bcc973b7SBarry Smith } 535bcc973b7SBarry Smith 5364a2ae208SSatish Balay #undef __FUNCT__ 537b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_4" 538dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 539bcc973b7SBarry Smith { 5404cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 541f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 54287828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4; 543dfbe8321SBarry Smith PetscErrorCode ierr; 544b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 545b24ad042SBarry Smith PetscInt n,i,jrow,j; 546f9fae5adSBarry Smith 547f9fae5adSBarry Smith PetscFunctionBegin; 548f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 5491ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 5501ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 551f9fae5adSBarry Smith idx = a->j; 552f9fae5adSBarry Smith v = a->a; 553f9fae5adSBarry Smith ii = a->i; 554f9fae5adSBarry Smith 555f9fae5adSBarry Smith for (i=0; i<m; i++) { 556f9fae5adSBarry Smith jrow = ii[i]; 557f9fae5adSBarry Smith n = ii[i+1] - jrow; 558f9fae5adSBarry Smith sum1 = 0.0; 559f9fae5adSBarry Smith sum2 = 0.0; 560f9fae5adSBarry Smith sum3 = 0.0; 561f9fae5adSBarry Smith sum4 = 0.0; 562f9fae5adSBarry Smith for (j=0; j<n; j++) { 563f9fae5adSBarry Smith sum1 += v[jrow]*x[4*idx[jrow]]; 564f9fae5adSBarry Smith sum2 += v[jrow]*x[4*idx[jrow]+1]; 565f9fae5adSBarry Smith sum3 += v[jrow]*x[4*idx[jrow]+2]; 566f9fae5adSBarry Smith sum4 += v[jrow]*x[4*idx[jrow]+3]; 567f9fae5adSBarry Smith jrow++; 568f9fae5adSBarry Smith } 569f9fae5adSBarry Smith y[4*i] += sum1; 570f9fae5adSBarry Smith y[4*i+1] += sum2; 571f9fae5adSBarry Smith y[4*i+2] += sum3; 572f9fae5adSBarry Smith y[4*i+3] += sum4; 573f9fae5adSBarry Smith } 574f9fae5adSBarry Smith 575b0a32e0cSBarry Smith PetscLogFlops(8*a->nz - 4*m); 5761ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 5771ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 578f9fae5adSBarry Smith PetscFunctionReturn(0); 579bcc973b7SBarry Smith } 5804a2ae208SSatish Balay #undef __FUNCT__ 581b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_4" 582dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 583bcc973b7SBarry Smith { 5844cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 585f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 58687828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4; 587dfbe8321SBarry Smith PetscErrorCode ierr; 588b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 589f9fae5adSBarry Smith 590f9fae5adSBarry Smith PetscFunctionBegin; 591f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 5921ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 5931ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 594bfec09a0SHong Zhang 595f9fae5adSBarry Smith for (i=0; i<m; i++) { 596bfec09a0SHong Zhang idx = a->j + a->i[i] ; 597bfec09a0SHong Zhang v = a->a + a->i[i] ; 598f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 599f9fae5adSBarry Smith alpha1 = x[4*i]; 600f9fae5adSBarry Smith alpha2 = x[4*i+1]; 601f9fae5adSBarry Smith alpha3 = x[4*i+2]; 602f9fae5adSBarry Smith alpha4 = x[4*i+3]; 603f9fae5adSBarry Smith while (n-->0) { 604f9fae5adSBarry Smith y[4*(*idx)] += alpha1*(*v); 605f9fae5adSBarry Smith y[4*(*idx)+1] += alpha2*(*v); 606f9fae5adSBarry Smith y[4*(*idx)+2] += alpha3*(*v); 607f9fae5adSBarry Smith y[4*(*idx)+3] += alpha4*(*v); 608f9fae5adSBarry Smith idx++; v++; 609f9fae5adSBarry Smith } 610f9fae5adSBarry Smith } 611b0a32e0cSBarry Smith PetscLogFlops(8*a->nz - 4*b->AIJ->n); 6121ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 6131ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 614f9fae5adSBarry Smith PetscFunctionReturn(0); 615f9fae5adSBarry Smith } 616f9fae5adSBarry Smith /* ------------------------------------------------------------------------------*/ 6176cd98798SBarry Smith 6184a2ae208SSatish Balay #undef __FUNCT__ 619b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_5" 620dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 621f9fae5adSBarry Smith { 6224cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 623f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 62487828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5; 625dfbe8321SBarry Smith PetscErrorCode ierr; 626b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 627b24ad042SBarry Smith PetscInt n,i,jrow,j; 628f9fae5adSBarry Smith 629f9fae5adSBarry Smith PetscFunctionBegin; 6301ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 6311ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 632f9fae5adSBarry Smith idx = a->j; 633f9fae5adSBarry Smith v = a->a; 634f9fae5adSBarry Smith ii = a->i; 635f9fae5adSBarry Smith 636f9fae5adSBarry Smith for (i=0; i<m; i++) { 637f9fae5adSBarry Smith jrow = ii[i]; 638f9fae5adSBarry Smith n = ii[i+1] - jrow; 639f9fae5adSBarry Smith sum1 = 0.0; 640f9fae5adSBarry Smith sum2 = 0.0; 641f9fae5adSBarry Smith sum3 = 0.0; 642f9fae5adSBarry Smith sum4 = 0.0; 643f9fae5adSBarry Smith sum5 = 0.0; 644f9fae5adSBarry Smith for (j=0; j<n; j++) { 645f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 646f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 647f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 648f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 649f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 650f9fae5adSBarry Smith jrow++; 651f9fae5adSBarry Smith } 652f9fae5adSBarry Smith y[5*i] = sum1; 653f9fae5adSBarry Smith y[5*i+1] = sum2; 654f9fae5adSBarry Smith y[5*i+2] = sum3; 655f9fae5adSBarry Smith y[5*i+3] = sum4; 656f9fae5adSBarry Smith y[5*i+4] = sum5; 657f9fae5adSBarry Smith } 658f9fae5adSBarry Smith 659b0a32e0cSBarry Smith PetscLogFlops(10*a->nz - 5*m); 6601ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 6611ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 662f9fae5adSBarry Smith PetscFunctionReturn(0); 663f9fae5adSBarry Smith } 664f9fae5adSBarry Smith 6654a2ae208SSatish Balay #undef __FUNCT__ 666b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_5" 667dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_5(Mat A,Vec xx,Vec yy) 668f9fae5adSBarry Smith { 6694cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 670f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 67187828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,zero = 0.0; 672dfbe8321SBarry Smith PetscErrorCode ierr; 673b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 674f9fae5adSBarry Smith 675f9fae5adSBarry Smith PetscFunctionBegin; 676f9fae5adSBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 6771ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 6781ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 679bfec09a0SHong Zhang 680f9fae5adSBarry Smith for (i=0; i<m; i++) { 681bfec09a0SHong Zhang idx = a->j + a->i[i] ; 682bfec09a0SHong Zhang v = a->a + a->i[i] ; 683f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 684f9fae5adSBarry Smith alpha1 = x[5*i]; 685f9fae5adSBarry Smith alpha2 = x[5*i+1]; 686f9fae5adSBarry Smith alpha3 = x[5*i+2]; 687f9fae5adSBarry Smith alpha4 = x[5*i+3]; 688f9fae5adSBarry Smith alpha5 = x[5*i+4]; 689f9fae5adSBarry Smith while (n-->0) { 690f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 691f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 692f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 693f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 694f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 695f9fae5adSBarry Smith idx++; v++; 696f9fae5adSBarry Smith } 697f9fae5adSBarry Smith } 698b0a32e0cSBarry Smith PetscLogFlops(10*a->nz - 5*b->AIJ->n); 6991ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 7001ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 701f9fae5adSBarry Smith PetscFunctionReturn(0); 702f9fae5adSBarry Smith } 703f9fae5adSBarry Smith 7044a2ae208SSatish Balay #undef __FUNCT__ 705b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_5" 706dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 707f9fae5adSBarry Smith { 7084cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 709f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 71087828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5; 711dfbe8321SBarry Smith PetscErrorCode ierr; 712b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 713b24ad042SBarry Smith PetscInt n,i,jrow,j; 714f9fae5adSBarry Smith 715f9fae5adSBarry Smith PetscFunctionBegin; 716f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 7171ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 7181ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 719f9fae5adSBarry Smith idx = a->j; 720f9fae5adSBarry Smith v = a->a; 721f9fae5adSBarry Smith ii = a->i; 722f9fae5adSBarry Smith 723f9fae5adSBarry Smith for (i=0; i<m; i++) { 724f9fae5adSBarry Smith jrow = ii[i]; 725f9fae5adSBarry Smith n = ii[i+1] - jrow; 726f9fae5adSBarry Smith sum1 = 0.0; 727f9fae5adSBarry Smith sum2 = 0.0; 728f9fae5adSBarry Smith sum3 = 0.0; 729f9fae5adSBarry Smith sum4 = 0.0; 730f9fae5adSBarry Smith sum5 = 0.0; 731f9fae5adSBarry Smith for (j=0; j<n; j++) { 732f9fae5adSBarry Smith sum1 += v[jrow]*x[5*idx[jrow]]; 733f9fae5adSBarry Smith sum2 += v[jrow]*x[5*idx[jrow]+1]; 734f9fae5adSBarry Smith sum3 += v[jrow]*x[5*idx[jrow]+2]; 735f9fae5adSBarry Smith sum4 += v[jrow]*x[5*idx[jrow]+3]; 736f9fae5adSBarry Smith sum5 += v[jrow]*x[5*idx[jrow]+4]; 737f9fae5adSBarry Smith jrow++; 738f9fae5adSBarry Smith } 739f9fae5adSBarry Smith y[5*i] += sum1; 740f9fae5adSBarry Smith y[5*i+1] += sum2; 741f9fae5adSBarry Smith y[5*i+2] += sum3; 742f9fae5adSBarry Smith y[5*i+3] += sum4; 743f9fae5adSBarry Smith y[5*i+4] += sum5; 744f9fae5adSBarry Smith } 745f9fae5adSBarry Smith 746b0a32e0cSBarry Smith PetscLogFlops(10*a->nz); 7471ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 7481ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 749f9fae5adSBarry Smith PetscFunctionReturn(0); 750f9fae5adSBarry Smith } 751f9fae5adSBarry Smith 7524a2ae208SSatish Balay #undef __FUNCT__ 753b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_5" 754dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 755f9fae5adSBarry Smith { 7564cb9d9b8SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 757f9fae5adSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 75887828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5; 759dfbe8321SBarry Smith PetscErrorCode ierr; 760b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 761f9fae5adSBarry Smith 762f9fae5adSBarry Smith PetscFunctionBegin; 763f9fae5adSBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 7641ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 7651ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 766bfec09a0SHong Zhang 767f9fae5adSBarry Smith for (i=0; i<m; i++) { 768bfec09a0SHong Zhang idx = a->j + a->i[i] ; 769bfec09a0SHong Zhang v = a->a + a->i[i] ; 770f9fae5adSBarry Smith n = a->i[i+1] - a->i[i]; 771f9fae5adSBarry Smith alpha1 = x[5*i]; 772f9fae5adSBarry Smith alpha2 = x[5*i+1]; 773f9fae5adSBarry Smith alpha3 = x[5*i+2]; 774f9fae5adSBarry Smith alpha4 = x[5*i+3]; 775f9fae5adSBarry Smith alpha5 = x[5*i+4]; 776f9fae5adSBarry Smith while (n-->0) { 777f9fae5adSBarry Smith y[5*(*idx)] += alpha1*(*v); 778f9fae5adSBarry Smith y[5*(*idx)+1] += alpha2*(*v); 779f9fae5adSBarry Smith y[5*(*idx)+2] += alpha3*(*v); 780f9fae5adSBarry Smith y[5*(*idx)+3] += alpha4*(*v); 781f9fae5adSBarry Smith y[5*(*idx)+4] += alpha5*(*v); 782f9fae5adSBarry Smith idx++; v++; 783f9fae5adSBarry Smith } 784f9fae5adSBarry Smith } 785b0a32e0cSBarry Smith PetscLogFlops(10*a->nz); 7861ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 7871ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 788f9fae5adSBarry Smith PetscFunctionReturn(0); 789bcc973b7SBarry Smith } 790bcc973b7SBarry Smith 7916cd98798SBarry Smith /* ------------------------------------------------------------------------------*/ 7924a2ae208SSatish Balay #undef __FUNCT__ 793b9617806SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_6" 794dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 7956cd98798SBarry Smith { 7966cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 7976cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 79887828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6; 799dfbe8321SBarry Smith PetscErrorCode ierr; 800b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 801b24ad042SBarry Smith PetscInt n,i,jrow,j; 8026cd98798SBarry Smith 8036cd98798SBarry Smith PetscFunctionBegin; 8041ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8051ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 8066cd98798SBarry Smith idx = a->j; 8076cd98798SBarry Smith v = a->a; 8086cd98798SBarry Smith ii = a->i; 8096cd98798SBarry Smith 8106cd98798SBarry Smith for (i=0; i<m; i++) { 8116cd98798SBarry Smith jrow = ii[i]; 8126cd98798SBarry Smith n = ii[i+1] - jrow; 8136cd98798SBarry Smith sum1 = 0.0; 8146cd98798SBarry Smith sum2 = 0.0; 8156cd98798SBarry Smith sum3 = 0.0; 8166cd98798SBarry Smith sum4 = 0.0; 8176cd98798SBarry Smith sum5 = 0.0; 8186cd98798SBarry Smith sum6 = 0.0; 8196cd98798SBarry Smith for (j=0; j<n; j++) { 8206cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 8216cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 8226cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 8236cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 8246cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 8256cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 8266cd98798SBarry Smith jrow++; 8276cd98798SBarry Smith } 8286cd98798SBarry Smith y[6*i] = sum1; 8296cd98798SBarry Smith y[6*i+1] = sum2; 8306cd98798SBarry Smith y[6*i+2] = sum3; 8316cd98798SBarry Smith y[6*i+3] = sum4; 8326cd98798SBarry Smith y[6*i+4] = sum5; 8336cd98798SBarry Smith y[6*i+5] = sum6; 8346cd98798SBarry Smith } 8356cd98798SBarry Smith 836b0a32e0cSBarry Smith PetscLogFlops(12*a->nz - 6*m); 8371ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 8381ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 8396cd98798SBarry Smith PetscFunctionReturn(0); 8406cd98798SBarry Smith } 8416cd98798SBarry Smith 8424a2ae208SSatish Balay #undef __FUNCT__ 843b9617806SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_6" 844dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_6(Mat A,Vec xx,Vec yy) 8456cd98798SBarry Smith { 8466cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8476cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 84887828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,zero = 0.0; 849dfbe8321SBarry Smith PetscErrorCode ierr; 850b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 8516cd98798SBarry Smith 8526cd98798SBarry Smith PetscFunctionBegin; 8536cd98798SBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 8541ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8551ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 856bfec09a0SHong Zhang 8576cd98798SBarry Smith for (i=0; i<m; i++) { 858bfec09a0SHong Zhang idx = a->j + a->i[i] ; 859bfec09a0SHong Zhang v = a->a + a->i[i] ; 8606cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 8616cd98798SBarry Smith alpha1 = x[6*i]; 8626cd98798SBarry Smith alpha2 = x[6*i+1]; 8636cd98798SBarry Smith alpha3 = x[6*i+2]; 8646cd98798SBarry Smith alpha4 = x[6*i+3]; 8656cd98798SBarry Smith alpha5 = x[6*i+4]; 8666cd98798SBarry Smith alpha6 = x[6*i+5]; 8676cd98798SBarry Smith while (n-->0) { 8686cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 8696cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 8706cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 8716cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 8726cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 8736cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 8746cd98798SBarry Smith idx++; v++; 8756cd98798SBarry Smith } 8766cd98798SBarry Smith } 877b0a32e0cSBarry Smith PetscLogFlops(12*a->nz - 6*b->AIJ->n); 8781ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 8791ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 8806cd98798SBarry Smith PetscFunctionReturn(0); 8816cd98798SBarry Smith } 8826cd98798SBarry Smith 8834a2ae208SSatish Balay #undef __FUNCT__ 884b9617806SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_6" 885dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 8866cd98798SBarry Smith { 8876cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 8886cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 88987828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6; 890dfbe8321SBarry Smith PetscErrorCode ierr; 891b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 892b24ad042SBarry Smith PetscInt n,i,jrow,j; 8936cd98798SBarry Smith 8946cd98798SBarry Smith PetscFunctionBegin; 8956cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 8961ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8971ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 8986cd98798SBarry Smith idx = a->j; 8996cd98798SBarry Smith v = a->a; 9006cd98798SBarry Smith ii = a->i; 9016cd98798SBarry Smith 9026cd98798SBarry Smith for (i=0; i<m; i++) { 9036cd98798SBarry Smith jrow = ii[i]; 9046cd98798SBarry Smith n = ii[i+1] - jrow; 9056cd98798SBarry Smith sum1 = 0.0; 9066cd98798SBarry Smith sum2 = 0.0; 9076cd98798SBarry Smith sum3 = 0.0; 9086cd98798SBarry Smith sum4 = 0.0; 9096cd98798SBarry Smith sum5 = 0.0; 9106cd98798SBarry Smith sum6 = 0.0; 9116cd98798SBarry Smith for (j=0; j<n; j++) { 9126cd98798SBarry Smith sum1 += v[jrow]*x[6*idx[jrow]]; 9136cd98798SBarry Smith sum2 += v[jrow]*x[6*idx[jrow]+1]; 9146cd98798SBarry Smith sum3 += v[jrow]*x[6*idx[jrow]+2]; 9156cd98798SBarry Smith sum4 += v[jrow]*x[6*idx[jrow]+3]; 9166cd98798SBarry Smith sum5 += v[jrow]*x[6*idx[jrow]+4]; 9176cd98798SBarry Smith sum6 += v[jrow]*x[6*idx[jrow]+5]; 9186cd98798SBarry Smith jrow++; 9196cd98798SBarry Smith } 9206cd98798SBarry Smith y[6*i] += sum1; 9216cd98798SBarry Smith y[6*i+1] += sum2; 9226cd98798SBarry Smith y[6*i+2] += sum3; 9236cd98798SBarry Smith y[6*i+3] += sum4; 9246cd98798SBarry Smith y[6*i+4] += sum5; 9256cd98798SBarry Smith y[6*i+5] += sum6; 9266cd98798SBarry Smith } 9276cd98798SBarry Smith 928b0a32e0cSBarry Smith PetscLogFlops(12*a->nz); 9291ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 9301ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 9316cd98798SBarry Smith PetscFunctionReturn(0); 9326cd98798SBarry Smith } 9336cd98798SBarry Smith 9344a2ae208SSatish Balay #undef __FUNCT__ 935b9617806SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_6" 936dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 9376cd98798SBarry Smith { 9386cd98798SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 9396cd98798SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 94087828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6; 941dfbe8321SBarry Smith PetscErrorCode ierr; 942b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 9436cd98798SBarry Smith 9446cd98798SBarry Smith PetscFunctionBegin; 9456cd98798SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 9461ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 9471ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 948bfec09a0SHong Zhang 9496cd98798SBarry Smith for (i=0; i<m; i++) { 950bfec09a0SHong Zhang idx = a->j + a->i[i] ; 951bfec09a0SHong Zhang v = a->a + a->i[i] ; 9526cd98798SBarry Smith n = a->i[i+1] - a->i[i]; 9536cd98798SBarry Smith alpha1 = x[6*i]; 9546cd98798SBarry Smith alpha2 = x[6*i+1]; 9556cd98798SBarry Smith alpha3 = x[6*i+2]; 9566cd98798SBarry Smith alpha4 = x[6*i+3]; 9576cd98798SBarry Smith alpha5 = x[6*i+4]; 9586cd98798SBarry Smith alpha6 = x[6*i+5]; 9596cd98798SBarry Smith while (n-->0) { 9606cd98798SBarry Smith y[6*(*idx)] += alpha1*(*v); 9616cd98798SBarry Smith y[6*(*idx)+1] += alpha2*(*v); 9626cd98798SBarry Smith y[6*(*idx)+2] += alpha3*(*v); 9636cd98798SBarry Smith y[6*(*idx)+3] += alpha4*(*v); 9646cd98798SBarry Smith y[6*(*idx)+4] += alpha5*(*v); 9656cd98798SBarry Smith y[6*(*idx)+5] += alpha6*(*v); 9666cd98798SBarry Smith idx++; v++; 9676cd98798SBarry Smith } 9686cd98798SBarry Smith } 969b0a32e0cSBarry Smith PetscLogFlops(12*a->nz); 9701ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 9711ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 9726cd98798SBarry Smith PetscFunctionReturn(0); 9736cd98798SBarry Smith } 9746cd98798SBarry Smith 97566ed3db0SBarry Smith /* ------------------------------------------------------------------------------*/ 97666ed3db0SBarry Smith #undef __FUNCT__ 977*ed8eea03SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_7" 978*ed8eea03SBarry Smith PetscErrorCode MatMult_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 979*ed8eea03SBarry Smith { 980*ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 981*ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 982*ed8eea03SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 983*ed8eea03SBarry Smith PetscErrorCode ierr; 984*ed8eea03SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 985*ed8eea03SBarry Smith PetscInt n,i,jrow,j; 986*ed8eea03SBarry Smith 987*ed8eea03SBarry Smith PetscFunctionBegin; 988*ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 989*ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 990*ed8eea03SBarry Smith idx = a->j; 991*ed8eea03SBarry Smith v = a->a; 992*ed8eea03SBarry Smith ii = a->i; 993*ed8eea03SBarry Smith 994*ed8eea03SBarry Smith for (i=0; i<m; i++) { 995*ed8eea03SBarry Smith jrow = ii[i]; 996*ed8eea03SBarry Smith n = ii[i+1] - jrow; 997*ed8eea03SBarry Smith sum1 = 0.0; 998*ed8eea03SBarry Smith sum2 = 0.0; 999*ed8eea03SBarry Smith sum3 = 0.0; 1000*ed8eea03SBarry Smith sum4 = 0.0; 1001*ed8eea03SBarry Smith sum5 = 0.0; 1002*ed8eea03SBarry Smith sum6 = 0.0; 1003*ed8eea03SBarry Smith sum7 = 0.0; 1004*ed8eea03SBarry Smith for (j=0; j<n; j++) { 1005*ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1006*ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1007*ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1008*ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1009*ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1010*ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1011*ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1012*ed8eea03SBarry Smith jrow++; 1013*ed8eea03SBarry Smith } 1014*ed8eea03SBarry Smith y[7*i] = sum1; 1015*ed8eea03SBarry Smith y[7*i+1] = sum2; 1016*ed8eea03SBarry Smith y[7*i+2] = sum3; 1017*ed8eea03SBarry Smith y[7*i+3] = sum4; 1018*ed8eea03SBarry Smith y[7*i+4] = sum5; 1019*ed8eea03SBarry Smith y[7*i+5] = sum6; 1020*ed8eea03SBarry Smith y[7*i+6] = sum7; 1021*ed8eea03SBarry Smith } 1022*ed8eea03SBarry Smith 1023*ed8eea03SBarry Smith PetscLogFlops(14*a->nz - 7*m); 1024*ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1025*ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1026*ed8eea03SBarry Smith PetscFunctionReturn(0); 1027*ed8eea03SBarry Smith } 1028*ed8eea03SBarry Smith 1029*ed8eea03SBarry Smith #undef __FUNCT__ 1030*ed8eea03SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_7" 1031*ed8eea03SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_7(Mat A,Vec xx,Vec yy) 1032*ed8eea03SBarry Smith { 1033*ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1034*ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1035*ed8eea03SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,zero = 0.0; 1036*ed8eea03SBarry Smith PetscErrorCode ierr; 1037*ed8eea03SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 1038*ed8eea03SBarry Smith 1039*ed8eea03SBarry Smith PetscFunctionBegin; 1040*ed8eea03SBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 1041*ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1042*ed8eea03SBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1043*ed8eea03SBarry Smith 1044*ed8eea03SBarry Smith for (i=0; i<m; i++) { 1045*ed8eea03SBarry Smith idx = a->j + a->i[i] ; 1046*ed8eea03SBarry Smith v = a->a + a->i[i] ; 1047*ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1048*ed8eea03SBarry Smith alpha1 = x[7*i]; 1049*ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1050*ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1051*ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1052*ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1053*ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1054*ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1055*ed8eea03SBarry Smith while (n-->0) { 1056*ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1057*ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1058*ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1059*ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1060*ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1061*ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1062*ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1063*ed8eea03SBarry Smith idx++; v++; 1064*ed8eea03SBarry Smith } 1065*ed8eea03SBarry Smith } 1066*ed8eea03SBarry Smith PetscLogFlops(14*a->nz - 7*b->AIJ->n); 1067*ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1068*ed8eea03SBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1069*ed8eea03SBarry Smith PetscFunctionReturn(0); 1070*ed8eea03SBarry Smith } 1071*ed8eea03SBarry Smith 1072*ed8eea03SBarry Smith #undef __FUNCT__ 1073*ed8eea03SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_7" 1074*ed8eea03SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1075*ed8eea03SBarry Smith { 1076*ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1077*ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1078*ed8eea03SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7; 1079*ed8eea03SBarry Smith PetscErrorCode ierr; 1080*ed8eea03SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 1081*ed8eea03SBarry Smith PetscInt n,i,jrow,j; 1082*ed8eea03SBarry Smith 1083*ed8eea03SBarry Smith PetscFunctionBegin; 1084*ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 1085*ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1086*ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1087*ed8eea03SBarry Smith idx = a->j; 1088*ed8eea03SBarry Smith v = a->a; 1089*ed8eea03SBarry Smith ii = a->i; 1090*ed8eea03SBarry Smith 1091*ed8eea03SBarry Smith for (i=0; i<m; i++) { 1092*ed8eea03SBarry Smith jrow = ii[i]; 1093*ed8eea03SBarry Smith n = ii[i+1] - jrow; 1094*ed8eea03SBarry Smith sum1 = 0.0; 1095*ed8eea03SBarry Smith sum2 = 0.0; 1096*ed8eea03SBarry Smith sum3 = 0.0; 1097*ed8eea03SBarry Smith sum4 = 0.0; 1098*ed8eea03SBarry Smith sum5 = 0.0; 1099*ed8eea03SBarry Smith sum6 = 0.0; 1100*ed8eea03SBarry Smith sum7 = 0.0; 1101*ed8eea03SBarry Smith for (j=0; j<n; j++) { 1102*ed8eea03SBarry Smith sum1 += v[jrow]*x[7*idx[jrow]]; 1103*ed8eea03SBarry Smith sum2 += v[jrow]*x[7*idx[jrow]+1]; 1104*ed8eea03SBarry Smith sum3 += v[jrow]*x[7*idx[jrow]+2]; 1105*ed8eea03SBarry Smith sum4 += v[jrow]*x[7*idx[jrow]+3]; 1106*ed8eea03SBarry Smith sum5 += v[jrow]*x[7*idx[jrow]+4]; 1107*ed8eea03SBarry Smith sum6 += v[jrow]*x[7*idx[jrow]+5]; 1108*ed8eea03SBarry Smith sum7 += v[jrow]*x[7*idx[jrow]+6]; 1109*ed8eea03SBarry Smith jrow++; 1110*ed8eea03SBarry Smith } 1111*ed8eea03SBarry Smith y[7*i] += sum1; 1112*ed8eea03SBarry Smith y[7*i+1] += sum2; 1113*ed8eea03SBarry Smith y[7*i+2] += sum3; 1114*ed8eea03SBarry Smith y[7*i+3] += sum4; 1115*ed8eea03SBarry Smith y[7*i+4] += sum5; 1116*ed8eea03SBarry Smith y[7*i+5] += sum6; 1117*ed8eea03SBarry Smith y[7*i+6] += sum7; 1118*ed8eea03SBarry Smith } 1119*ed8eea03SBarry Smith 1120*ed8eea03SBarry Smith PetscLogFlops(14*a->nz); 1121*ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1122*ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1123*ed8eea03SBarry Smith PetscFunctionReturn(0); 1124*ed8eea03SBarry Smith } 1125*ed8eea03SBarry Smith 1126*ed8eea03SBarry Smith #undef __FUNCT__ 1127*ed8eea03SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_7" 1128*ed8eea03SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 1129*ed8eea03SBarry Smith { 1130*ed8eea03SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 1131*ed8eea03SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 1132*ed8eea03SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7; 1133*ed8eea03SBarry Smith PetscErrorCode ierr; 1134*ed8eea03SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 1135*ed8eea03SBarry Smith 1136*ed8eea03SBarry Smith PetscFunctionBegin; 1137*ed8eea03SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 1138*ed8eea03SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1139*ed8eea03SBarry Smith ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 1140*ed8eea03SBarry Smith for (i=0; i<m; i++) { 1141*ed8eea03SBarry Smith idx = a->j + a->i[i] ; 1142*ed8eea03SBarry Smith v = a->a + a->i[i] ; 1143*ed8eea03SBarry Smith n = a->i[i+1] - a->i[i]; 1144*ed8eea03SBarry Smith alpha1 = x[7*i]; 1145*ed8eea03SBarry Smith alpha2 = x[7*i+1]; 1146*ed8eea03SBarry Smith alpha3 = x[7*i+2]; 1147*ed8eea03SBarry Smith alpha4 = x[7*i+3]; 1148*ed8eea03SBarry Smith alpha5 = x[7*i+4]; 1149*ed8eea03SBarry Smith alpha6 = x[7*i+5]; 1150*ed8eea03SBarry Smith alpha7 = x[7*i+6]; 1151*ed8eea03SBarry Smith while (n-->0) { 1152*ed8eea03SBarry Smith y[7*(*idx)] += alpha1*(*v); 1153*ed8eea03SBarry Smith y[7*(*idx)+1] += alpha2*(*v); 1154*ed8eea03SBarry Smith y[7*(*idx)+2] += alpha3*(*v); 1155*ed8eea03SBarry Smith y[7*(*idx)+3] += alpha4*(*v); 1156*ed8eea03SBarry Smith y[7*(*idx)+4] += alpha5*(*v); 1157*ed8eea03SBarry Smith y[7*(*idx)+5] += alpha6*(*v); 1158*ed8eea03SBarry Smith y[7*(*idx)+6] += alpha7*(*v); 1159*ed8eea03SBarry Smith idx++; v++; 1160*ed8eea03SBarry Smith } 1161*ed8eea03SBarry Smith } 1162*ed8eea03SBarry Smith PetscLogFlops(14*a->nz); 1163*ed8eea03SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1164*ed8eea03SBarry Smith ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 1165*ed8eea03SBarry Smith PetscFunctionReturn(0); 1166*ed8eea03SBarry Smith } 1167*ed8eea03SBarry Smith 1168*ed8eea03SBarry Smith #undef __FUNCT__ 116966ed3db0SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_8" 1170dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 117166ed3db0SBarry Smith { 117266ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 117366ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 117487828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1175dfbe8321SBarry Smith PetscErrorCode ierr; 1176b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 1177b24ad042SBarry Smith PetscInt n,i,jrow,j; 117866ed3db0SBarry Smith 117966ed3db0SBarry Smith PetscFunctionBegin; 11801ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 11811ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 118266ed3db0SBarry Smith idx = a->j; 118366ed3db0SBarry Smith v = a->a; 118466ed3db0SBarry Smith ii = a->i; 118566ed3db0SBarry Smith 118666ed3db0SBarry Smith for (i=0; i<m; i++) { 118766ed3db0SBarry Smith jrow = ii[i]; 118866ed3db0SBarry Smith n = ii[i+1] - jrow; 118966ed3db0SBarry Smith sum1 = 0.0; 119066ed3db0SBarry Smith sum2 = 0.0; 119166ed3db0SBarry Smith sum3 = 0.0; 119266ed3db0SBarry Smith sum4 = 0.0; 119366ed3db0SBarry Smith sum5 = 0.0; 119466ed3db0SBarry Smith sum6 = 0.0; 119566ed3db0SBarry Smith sum7 = 0.0; 119666ed3db0SBarry Smith sum8 = 0.0; 119766ed3db0SBarry Smith for (j=0; j<n; j++) { 119866ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 119966ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 120066ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 120166ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 120266ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 120366ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 120466ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 120566ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 120666ed3db0SBarry Smith jrow++; 120766ed3db0SBarry Smith } 120866ed3db0SBarry Smith y[8*i] = sum1; 120966ed3db0SBarry Smith y[8*i+1] = sum2; 121066ed3db0SBarry Smith y[8*i+2] = sum3; 121166ed3db0SBarry Smith y[8*i+3] = sum4; 121266ed3db0SBarry Smith y[8*i+4] = sum5; 121366ed3db0SBarry Smith y[8*i+5] = sum6; 121466ed3db0SBarry Smith y[8*i+6] = sum7; 121566ed3db0SBarry Smith y[8*i+7] = sum8; 121666ed3db0SBarry Smith } 121766ed3db0SBarry Smith 121866ed3db0SBarry Smith PetscLogFlops(16*a->nz - 8*m); 12191ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 12201ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 122166ed3db0SBarry Smith PetscFunctionReturn(0); 122266ed3db0SBarry Smith } 122366ed3db0SBarry Smith 122466ed3db0SBarry Smith #undef __FUNCT__ 122566ed3db0SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_8" 1226dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_8(Mat A,Vec xx,Vec yy) 122766ed3db0SBarry Smith { 122866ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 122966ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 123087828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,zero = 0.0; 1231dfbe8321SBarry Smith PetscErrorCode ierr; 1232b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 123366ed3db0SBarry Smith 123466ed3db0SBarry Smith PetscFunctionBegin; 123566ed3db0SBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 12361ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 12371ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1238bfec09a0SHong Zhang 123966ed3db0SBarry Smith for (i=0; i<m; i++) { 1240bfec09a0SHong Zhang idx = a->j + a->i[i] ; 1241bfec09a0SHong Zhang v = a->a + a->i[i] ; 124266ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 124366ed3db0SBarry Smith alpha1 = x[8*i]; 124466ed3db0SBarry Smith alpha2 = x[8*i+1]; 124566ed3db0SBarry Smith alpha3 = x[8*i+2]; 124666ed3db0SBarry Smith alpha4 = x[8*i+3]; 124766ed3db0SBarry Smith alpha5 = x[8*i+4]; 124866ed3db0SBarry Smith alpha6 = x[8*i+5]; 124966ed3db0SBarry Smith alpha7 = x[8*i+6]; 125066ed3db0SBarry Smith alpha8 = x[8*i+7]; 125166ed3db0SBarry Smith while (n-->0) { 125266ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 125366ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 125466ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 125566ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 125666ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 125766ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 125866ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 125966ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 126066ed3db0SBarry Smith idx++; v++; 126166ed3db0SBarry Smith } 126266ed3db0SBarry Smith } 126366ed3db0SBarry Smith PetscLogFlops(16*a->nz - 8*b->AIJ->n); 12641ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 12651ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 126666ed3db0SBarry Smith PetscFunctionReturn(0); 126766ed3db0SBarry Smith } 126866ed3db0SBarry Smith 126966ed3db0SBarry Smith #undef __FUNCT__ 127066ed3db0SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_8" 1271dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 127266ed3db0SBarry Smith { 127366ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 127466ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 127587828ca2SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 1276dfbe8321SBarry Smith PetscErrorCode ierr; 1277b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 1278b24ad042SBarry Smith PetscInt n,i,jrow,j; 127966ed3db0SBarry Smith 128066ed3db0SBarry Smith PetscFunctionBegin; 128166ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 12821ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 12831ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 128466ed3db0SBarry Smith idx = a->j; 128566ed3db0SBarry Smith v = a->a; 128666ed3db0SBarry Smith ii = a->i; 128766ed3db0SBarry Smith 128866ed3db0SBarry Smith for (i=0; i<m; i++) { 128966ed3db0SBarry Smith jrow = ii[i]; 129066ed3db0SBarry Smith n = ii[i+1] - jrow; 129166ed3db0SBarry Smith sum1 = 0.0; 129266ed3db0SBarry Smith sum2 = 0.0; 129366ed3db0SBarry Smith sum3 = 0.0; 129466ed3db0SBarry Smith sum4 = 0.0; 129566ed3db0SBarry Smith sum5 = 0.0; 129666ed3db0SBarry Smith sum6 = 0.0; 129766ed3db0SBarry Smith sum7 = 0.0; 129866ed3db0SBarry Smith sum8 = 0.0; 129966ed3db0SBarry Smith for (j=0; j<n; j++) { 130066ed3db0SBarry Smith sum1 += v[jrow]*x[8*idx[jrow]]; 130166ed3db0SBarry Smith sum2 += v[jrow]*x[8*idx[jrow]+1]; 130266ed3db0SBarry Smith sum3 += v[jrow]*x[8*idx[jrow]+2]; 130366ed3db0SBarry Smith sum4 += v[jrow]*x[8*idx[jrow]+3]; 130466ed3db0SBarry Smith sum5 += v[jrow]*x[8*idx[jrow]+4]; 130566ed3db0SBarry Smith sum6 += v[jrow]*x[8*idx[jrow]+5]; 130666ed3db0SBarry Smith sum7 += v[jrow]*x[8*idx[jrow]+6]; 130766ed3db0SBarry Smith sum8 += v[jrow]*x[8*idx[jrow]+7]; 130866ed3db0SBarry Smith jrow++; 130966ed3db0SBarry Smith } 131066ed3db0SBarry Smith y[8*i] += sum1; 131166ed3db0SBarry Smith y[8*i+1] += sum2; 131266ed3db0SBarry Smith y[8*i+2] += sum3; 131366ed3db0SBarry Smith y[8*i+3] += sum4; 131466ed3db0SBarry Smith y[8*i+4] += sum5; 131566ed3db0SBarry Smith y[8*i+5] += sum6; 131666ed3db0SBarry Smith y[8*i+6] += sum7; 131766ed3db0SBarry Smith y[8*i+7] += sum8; 131866ed3db0SBarry Smith } 131966ed3db0SBarry Smith 132066ed3db0SBarry Smith PetscLogFlops(16*a->nz); 13211ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 13221ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 132366ed3db0SBarry Smith PetscFunctionReturn(0); 132466ed3db0SBarry Smith } 132566ed3db0SBarry Smith 132666ed3db0SBarry Smith #undef __FUNCT__ 132766ed3db0SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_8" 1328dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_8(Mat A,Vec xx,Vec yy,Vec zz) 132966ed3db0SBarry Smith { 133066ed3db0SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 133166ed3db0SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 133287828ca2SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 1333dfbe8321SBarry Smith PetscErrorCode ierr; 1334b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 133566ed3db0SBarry Smith 133666ed3db0SBarry Smith PetscFunctionBegin; 133766ed3db0SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 13381ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 13391ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 134066ed3db0SBarry Smith for (i=0; i<m; i++) { 1341bfec09a0SHong Zhang idx = a->j + a->i[i] ; 1342bfec09a0SHong Zhang v = a->a + a->i[i] ; 134366ed3db0SBarry Smith n = a->i[i+1] - a->i[i]; 134466ed3db0SBarry Smith alpha1 = x[8*i]; 134566ed3db0SBarry Smith alpha2 = x[8*i+1]; 134666ed3db0SBarry Smith alpha3 = x[8*i+2]; 134766ed3db0SBarry Smith alpha4 = x[8*i+3]; 134866ed3db0SBarry Smith alpha5 = x[8*i+4]; 134966ed3db0SBarry Smith alpha6 = x[8*i+5]; 135066ed3db0SBarry Smith alpha7 = x[8*i+6]; 135166ed3db0SBarry Smith alpha8 = x[8*i+7]; 135266ed3db0SBarry Smith while (n-->0) { 135366ed3db0SBarry Smith y[8*(*idx)] += alpha1*(*v); 135466ed3db0SBarry Smith y[8*(*idx)+1] += alpha2*(*v); 135566ed3db0SBarry Smith y[8*(*idx)+2] += alpha3*(*v); 135666ed3db0SBarry Smith y[8*(*idx)+3] += alpha4*(*v); 135766ed3db0SBarry Smith y[8*(*idx)+4] += alpha5*(*v); 135866ed3db0SBarry Smith y[8*(*idx)+5] += alpha6*(*v); 135966ed3db0SBarry Smith y[8*(*idx)+6] += alpha7*(*v); 136066ed3db0SBarry Smith y[8*(*idx)+7] += alpha8*(*v); 136166ed3db0SBarry Smith idx++; v++; 136266ed3db0SBarry Smith } 136366ed3db0SBarry Smith } 136466ed3db0SBarry Smith PetscLogFlops(16*a->nz); 13651ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 13661ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 13672f7816d4SBarry Smith PetscFunctionReturn(0); 13682f7816d4SBarry Smith } 13692f7816d4SBarry Smith 1370*ed8eea03SBarry Smith 13712b692628SMatthew Knepley /* ------------------------------------------------------------------------------*/ 13722b692628SMatthew Knepley #undef __FUNCT__ 13732b692628SMatthew Knepley #define __FUNCT__ "MatMult_SeqMAIJ_9" 1374dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 13752b692628SMatthew Knepley { 13762b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 13772b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 13782b692628SMatthew Knepley PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1379dfbe8321SBarry Smith PetscErrorCode ierr; 1380b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 1381b24ad042SBarry Smith PetscInt n,i,jrow,j; 13822b692628SMatthew Knepley 13832b692628SMatthew Knepley PetscFunctionBegin; 13841ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 13851ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 13862b692628SMatthew Knepley idx = a->j; 13872b692628SMatthew Knepley v = a->a; 13882b692628SMatthew Knepley ii = a->i; 13892b692628SMatthew Knepley 13902b692628SMatthew Knepley for (i=0; i<m; i++) { 13912b692628SMatthew Knepley jrow = ii[i]; 13922b692628SMatthew Knepley n = ii[i+1] - jrow; 13932b692628SMatthew Knepley sum1 = 0.0; 13942b692628SMatthew Knepley sum2 = 0.0; 13952b692628SMatthew Knepley sum3 = 0.0; 13962b692628SMatthew Knepley sum4 = 0.0; 13972b692628SMatthew Knepley sum5 = 0.0; 13982b692628SMatthew Knepley sum6 = 0.0; 13992b692628SMatthew Knepley sum7 = 0.0; 14002b692628SMatthew Knepley sum8 = 0.0; 14012b692628SMatthew Knepley sum9 = 0.0; 14022b692628SMatthew Knepley for (j=0; j<n; j++) { 14032b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 14042b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 14052b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 14062b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 14072b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 14082b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 14092b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 14102b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 14112b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 14122b692628SMatthew Knepley jrow++; 14132b692628SMatthew Knepley } 14142b692628SMatthew Knepley y[9*i] = sum1; 14152b692628SMatthew Knepley y[9*i+1] = sum2; 14162b692628SMatthew Knepley y[9*i+2] = sum3; 14172b692628SMatthew Knepley y[9*i+3] = sum4; 14182b692628SMatthew Knepley y[9*i+4] = sum5; 14192b692628SMatthew Knepley y[9*i+5] = sum6; 14202b692628SMatthew Knepley y[9*i+6] = sum7; 14212b692628SMatthew Knepley y[9*i+7] = sum8; 14222b692628SMatthew Knepley y[9*i+8] = sum9; 14232b692628SMatthew Knepley } 14242b692628SMatthew Knepley 14252b692628SMatthew Knepley PetscLogFlops(18*a->nz - 9*m); 14261ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 14271ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 14282b692628SMatthew Knepley PetscFunctionReturn(0); 14292b692628SMatthew Knepley } 14302b692628SMatthew Knepley 14312b692628SMatthew Knepley #undef __FUNCT__ 14322b692628SMatthew Knepley #define __FUNCT__ "MatMultTranspose_SeqMAIJ_9" 1433dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_9(Mat A,Vec xx,Vec yy) 14342b692628SMatthew Knepley { 14352b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 14362b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 14372b692628SMatthew Knepley PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9,zero = 0.0; 1438dfbe8321SBarry Smith PetscErrorCode ierr; 1439b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 14402b692628SMatthew Knepley 14412b692628SMatthew Knepley PetscFunctionBegin; 14422b692628SMatthew Knepley ierr = VecSet(&zero,yy);CHKERRQ(ierr); 14431ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 14441ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 14452b692628SMatthew Knepley 14462b692628SMatthew Knepley for (i=0; i<m; i++) { 14472b692628SMatthew Knepley idx = a->j + a->i[i] ; 14482b692628SMatthew Knepley v = a->a + a->i[i] ; 14492b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 14502b692628SMatthew Knepley alpha1 = x[9*i]; 14512b692628SMatthew Knepley alpha2 = x[9*i+1]; 14522b692628SMatthew Knepley alpha3 = x[9*i+2]; 14532b692628SMatthew Knepley alpha4 = x[9*i+3]; 14542b692628SMatthew Knepley alpha5 = x[9*i+4]; 14552b692628SMatthew Knepley alpha6 = x[9*i+5]; 14562b692628SMatthew Knepley alpha7 = x[9*i+6]; 14572b692628SMatthew Knepley alpha8 = x[9*i+7]; 14582f6bd0c6SMatthew Knepley alpha9 = x[9*i+8]; 14592b692628SMatthew Knepley while (n-->0) { 14602b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 14612b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 14622b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 14632b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 14642b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 14652b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 14662b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 14672b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 14682b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 14692b692628SMatthew Knepley idx++; v++; 14702b692628SMatthew Knepley } 14712b692628SMatthew Knepley } 14722b692628SMatthew Knepley PetscLogFlops(18*a->nz - 9*b->AIJ->n); 14731ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 14741ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 14752b692628SMatthew Knepley PetscFunctionReturn(0); 14762b692628SMatthew Knepley } 14772b692628SMatthew Knepley 14782b692628SMatthew Knepley #undef __FUNCT__ 14792b692628SMatthew Knepley #define __FUNCT__ "MatMultAdd_SeqMAIJ_9" 1480dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 14812b692628SMatthew Knepley { 14822b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 14832b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 14842b692628SMatthew Knepley PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8, sum9; 1485dfbe8321SBarry Smith PetscErrorCode ierr; 1486b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 1487b24ad042SBarry Smith PetscInt n,i,jrow,j; 14882b692628SMatthew Knepley 14892b692628SMatthew Knepley PetscFunctionBegin; 14902b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 14911ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 14921ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 14932b692628SMatthew Knepley idx = a->j; 14942b692628SMatthew Knepley v = a->a; 14952b692628SMatthew Knepley ii = a->i; 14962b692628SMatthew Knepley 14972b692628SMatthew Knepley for (i=0; i<m; i++) { 14982b692628SMatthew Knepley jrow = ii[i]; 14992b692628SMatthew Knepley n = ii[i+1] - jrow; 15002b692628SMatthew Knepley sum1 = 0.0; 15012b692628SMatthew Knepley sum2 = 0.0; 15022b692628SMatthew Knepley sum3 = 0.0; 15032b692628SMatthew Knepley sum4 = 0.0; 15042b692628SMatthew Knepley sum5 = 0.0; 15052b692628SMatthew Knepley sum6 = 0.0; 15062b692628SMatthew Knepley sum7 = 0.0; 15072b692628SMatthew Knepley sum8 = 0.0; 15082b692628SMatthew Knepley sum9 = 0.0; 15092b692628SMatthew Knepley for (j=0; j<n; j++) { 15102b692628SMatthew Knepley sum1 += v[jrow]*x[9*idx[jrow]]; 15112b692628SMatthew Knepley sum2 += v[jrow]*x[9*idx[jrow]+1]; 15122b692628SMatthew Knepley sum3 += v[jrow]*x[9*idx[jrow]+2]; 15132b692628SMatthew Knepley sum4 += v[jrow]*x[9*idx[jrow]+3]; 15142b692628SMatthew Knepley sum5 += v[jrow]*x[9*idx[jrow]+4]; 15152b692628SMatthew Knepley sum6 += v[jrow]*x[9*idx[jrow]+5]; 15162b692628SMatthew Knepley sum7 += v[jrow]*x[9*idx[jrow]+6]; 15172b692628SMatthew Knepley sum8 += v[jrow]*x[9*idx[jrow]+7]; 15182b692628SMatthew Knepley sum9 += v[jrow]*x[9*idx[jrow]+8]; 15192b692628SMatthew Knepley jrow++; 15202b692628SMatthew Knepley } 15212b692628SMatthew Knepley y[9*i] += sum1; 15222b692628SMatthew Knepley y[9*i+1] += sum2; 15232b692628SMatthew Knepley y[9*i+2] += sum3; 15242b692628SMatthew Knepley y[9*i+3] += sum4; 15252b692628SMatthew Knepley y[9*i+4] += sum5; 15262b692628SMatthew Knepley y[9*i+5] += sum6; 15272b692628SMatthew Knepley y[9*i+6] += sum7; 15282b692628SMatthew Knepley y[9*i+7] += sum8; 15292b692628SMatthew Knepley y[9*i+8] += sum9; 15302b692628SMatthew Knepley } 15312b692628SMatthew Knepley 15322b692628SMatthew Knepley PetscLogFlops(18*a->nz); 15331ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 15341ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 15352b692628SMatthew Knepley PetscFunctionReturn(0); 15362b692628SMatthew Knepley } 15372b692628SMatthew Knepley 15382b692628SMatthew Knepley #undef __FUNCT__ 15392b692628SMatthew Knepley #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_9" 1540dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_9(Mat A,Vec xx,Vec yy,Vec zz) 15412b692628SMatthew Knepley { 15422b692628SMatthew Knepley Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15432b692628SMatthew Knepley Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 15442b692628SMatthew Knepley PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,alpha9; 1545dfbe8321SBarry Smith PetscErrorCode ierr; 1546b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 15472b692628SMatthew Knepley 15482b692628SMatthew Knepley PetscFunctionBegin; 15492b692628SMatthew Knepley if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 15501ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 15511ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 15522b692628SMatthew Knepley for (i=0; i<m; i++) { 15532b692628SMatthew Knepley idx = a->j + a->i[i] ; 15542b692628SMatthew Knepley v = a->a + a->i[i] ; 15552b692628SMatthew Knepley n = a->i[i+1] - a->i[i]; 15562b692628SMatthew Knepley alpha1 = x[9*i]; 15572b692628SMatthew Knepley alpha2 = x[9*i+1]; 15582b692628SMatthew Knepley alpha3 = x[9*i+2]; 15592b692628SMatthew Knepley alpha4 = x[9*i+3]; 15602b692628SMatthew Knepley alpha5 = x[9*i+4]; 15612b692628SMatthew Knepley alpha6 = x[9*i+5]; 15622b692628SMatthew Knepley alpha7 = x[9*i+6]; 15632b692628SMatthew Knepley alpha8 = x[9*i+7]; 15642b692628SMatthew Knepley alpha9 = x[9*i+8]; 15652b692628SMatthew Knepley while (n-->0) { 15662b692628SMatthew Knepley y[9*(*idx)] += alpha1*(*v); 15672b692628SMatthew Knepley y[9*(*idx)+1] += alpha2*(*v); 15682b692628SMatthew Knepley y[9*(*idx)+2] += alpha3*(*v); 15692b692628SMatthew Knepley y[9*(*idx)+3] += alpha4*(*v); 15702b692628SMatthew Knepley y[9*(*idx)+4] += alpha5*(*v); 15712b692628SMatthew Knepley y[9*(*idx)+5] += alpha6*(*v); 15722b692628SMatthew Knepley y[9*(*idx)+6] += alpha7*(*v); 15732b692628SMatthew Knepley y[9*(*idx)+7] += alpha8*(*v); 15742b692628SMatthew Knepley y[9*(*idx)+8] += alpha9*(*v); 15752b692628SMatthew Knepley idx++; v++; 15762b692628SMatthew Knepley } 15772b692628SMatthew Knepley } 15782b692628SMatthew Knepley PetscLogFlops(18*a->nz); 15791ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 15801ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 15812b692628SMatthew Knepley PetscFunctionReturn(0); 15822b692628SMatthew Knepley } 15832b692628SMatthew Knepley 15842f7816d4SBarry Smith /*--------------------------------------------------------------------------------------------*/ 15852f7816d4SBarry Smith #undef __FUNCT__ 15862f7816d4SBarry Smith #define __FUNCT__ "MatMult_SeqMAIJ_16" 1587dfbe8321SBarry Smith PetscErrorCode MatMult_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 15882f7816d4SBarry Smith { 15892f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 15902f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 15912f7816d4SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 15922f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 1593dfbe8321SBarry Smith PetscErrorCode ierr; 1594b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 1595b24ad042SBarry Smith PetscInt n,i,jrow,j; 15962f7816d4SBarry Smith 15972f7816d4SBarry Smith PetscFunctionBegin; 15981ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 15991ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 16002f7816d4SBarry Smith idx = a->j; 16012f7816d4SBarry Smith v = a->a; 16022f7816d4SBarry Smith ii = a->i; 16032f7816d4SBarry Smith 16042f7816d4SBarry Smith for (i=0; i<m; i++) { 16052f7816d4SBarry Smith jrow = ii[i]; 16062f7816d4SBarry Smith n = ii[i+1] - jrow; 16072f7816d4SBarry Smith sum1 = 0.0; 16082f7816d4SBarry Smith sum2 = 0.0; 16092f7816d4SBarry Smith sum3 = 0.0; 16102f7816d4SBarry Smith sum4 = 0.0; 16112f7816d4SBarry Smith sum5 = 0.0; 16122f7816d4SBarry Smith sum6 = 0.0; 16132f7816d4SBarry Smith sum7 = 0.0; 16142f7816d4SBarry Smith sum8 = 0.0; 16152f7816d4SBarry Smith sum9 = 0.0; 16162f7816d4SBarry Smith sum10 = 0.0; 16172f7816d4SBarry Smith sum11 = 0.0; 16182f7816d4SBarry Smith sum12 = 0.0; 16192f7816d4SBarry Smith sum13 = 0.0; 16202f7816d4SBarry Smith sum14 = 0.0; 16212f7816d4SBarry Smith sum15 = 0.0; 16222f7816d4SBarry Smith sum16 = 0.0; 16232f7816d4SBarry Smith for (j=0; j<n; j++) { 16242f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 16252f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 16262f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 16272f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 16282f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 16292f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 16302f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 16312f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 16322f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 16332f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 16342f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 16352f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 16362f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 16372f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 16382f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 16392f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 16402f7816d4SBarry Smith jrow++; 16412f7816d4SBarry Smith } 16422f7816d4SBarry Smith y[16*i] = sum1; 16432f7816d4SBarry Smith y[16*i+1] = sum2; 16442f7816d4SBarry Smith y[16*i+2] = sum3; 16452f7816d4SBarry Smith y[16*i+3] = sum4; 16462f7816d4SBarry Smith y[16*i+4] = sum5; 16472f7816d4SBarry Smith y[16*i+5] = sum6; 16482f7816d4SBarry Smith y[16*i+6] = sum7; 16492f7816d4SBarry Smith y[16*i+7] = sum8; 16502f7816d4SBarry Smith y[16*i+8] = sum9; 16512f7816d4SBarry Smith y[16*i+9] = sum10; 16522f7816d4SBarry Smith y[16*i+10] = sum11; 16532f7816d4SBarry Smith y[16*i+11] = sum12; 16542f7816d4SBarry Smith y[16*i+12] = sum13; 16552f7816d4SBarry Smith y[16*i+13] = sum14; 16562f7816d4SBarry Smith y[16*i+14] = sum15; 16572f7816d4SBarry Smith y[16*i+15] = sum16; 16582f7816d4SBarry Smith } 16592f7816d4SBarry Smith 16602f7816d4SBarry Smith PetscLogFlops(32*a->nz - 16*m); 16611ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 16621ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 16632f7816d4SBarry Smith PetscFunctionReturn(0); 16642f7816d4SBarry Smith } 16652f7816d4SBarry Smith 16662f7816d4SBarry Smith #undef __FUNCT__ 16672f7816d4SBarry Smith #define __FUNCT__ "MatMultTranspose_SeqMAIJ_16" 1668dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqMAIJ_16(Mat A,Vec xx,Vec yy) 16692f7816d4SBarry Smith { 16702f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 16712f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 16722f7816d4SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8,zero = 0.0; 16732f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 1674dfbe8321SBarry Smith PetscErrorCode ierr; 1675b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 16762f7816d4SBarry Smith 16772f7816d4SBarry Smith PetscFunctionBegin; 16782f7816d4SBarry Smith ierr = VecSet(&zero,yy);CHKERRQ(ierr); 16791ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 16801ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 1681bfec09a0SHong Zhang 16822f7816d4SBarry Smith for (i=0; i<m; i++) { 1683bfec09a0SHong Zhang idx = a->j + a->i[i] ; 1684bfec09a0SHong Zhang v = a->a + a->i[i] ; 16852f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 16862f7816d4SBarry Smith alpha1 = x[16*i]; 16872f7816d4SBarry Smith alpha2 = x[16*i+1]; 16882f7816d4SBarry Smith alpha3 = x[16*i+2]; 16892f7816d4SBarry Smith alpha4 = x[16*i+3]; 16902f7816d4SBarry Smith alpha5 = x[16*i+4]; 16912f7816d4SBarry Smith alpha6 = x[16*i+5]; 16922f7816d4SBarry Smith alpha7 = x[16*i+6]; 16932f7816d4SBarry Smith alpha8 = x[16*i+7]; 16942f7816d4SBarry Smith alpha9 = x[16*i+8]; 16952f7816d4SBarry Smith alpha10 = x[16*i+9]; 16962f7816d4SBarry Smith alpha11 = x[16*i+10]; 16972f7816d4SBarry Smith alpha12 = x[16*i+11]; 16982f7816d4SBarry Smith alpha13 = x[16*i+12]; 16992f7816d4SBarry Smith alpha14 = x[16*i+13]; 17002f7816d4SBarry Smith alpha15 = x[16*i+14]; 17012f7816d4SBarry Smith alpha16 = x[16*i+15]; 17022f7816d4SBarry Smith while (n-->0) { 17032f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 17042f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 17052f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 17062f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 17072f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 17082f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 17092f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 17102f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 17112f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 17122f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 17132f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 17142f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 17152f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 17162f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 17172f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 17182f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 17192f7816d4SBarry Smith idx++; v++; 17202f7816d4SBarry Smith } 17212f7816d4SBarry Smith } 17222f7816d4SBarry Smith PetscLogFlops(32*a->nz - 16*b->AIJ->n); 17231ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 17241ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 17252f7816d4SBarry Smith PetscFunctionReturn(0); 17262f7816d4SBarry Smith } 17272f7816d4SBarry Smith 17282f7816d4SBarry Smith #undef __FUNCT__ 17292f7816d4SBarry Smith #define __FUNCT__ "MatMultAdd_SeqMAIJ_16" 1730dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 17312f7816d4SBarry Smith { 17322f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 17332f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 17342f7816d4SBarry Smith PetscScalar *x,*y,*v,sum1, sum2, sum3, sum4, sum5, sum6, sum7, sum8; 17352f7816d4SBarry Smith PetscScalar sum9, sum10, sum11, sum12, sum13, sum14, sum15, sum16; 1736dfbe8321SBarry Smith PetscErrorCode ierr; 1737b24ad042SBarry Smith PetscInt m = b->AIJ->m,*idx,*ii; 1738b24ad042SBarry Smith PetscInt n,i,jrow,j; 17392f7816d4SBarry Smith 17402f7816d4SBarry Smith PetscFunctionBegin; 17412f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 17421ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 17431ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 17442f7816d4SBarry Smith idx = a->j; 17452f7816d4SBarry Smith v = a->a; 17462f7816d4SBarry Smith ii = a->i; 17472f7816d4SBarry Smith 17482f7816d4SBarry Smith for (i=0; i<m; i++) { 17492f7816d4SBarry Smith jrow = ii[i]; 17502f7816d4SBarry Smith n = ii[i+1] - jrow; 17512f7816d4SBarry Smith sum1 = 0.0; 17522f7816d4SBarry Smith sum2 = 0.0; 17532f7816d4SBarry Smith sum3 = 0.0; 17542f7816d4SBarry Smith sum4 = 0.0; 17552f7816d4SBarry Smith sum5 = 0.0; 17562f7816d4SBarry Smith sum6 = 0.0; 17572f7816d4SBarry Smith sum7 = 0.0; 17582f7816d4SBarry Smith sum8 = 0.0; 17592f7816d4SBarry Smith sum9 = 0.0; 17602f7816d4SBarry Smith sum10 = 0.0; 17612f7816d4SBarry Smith sum11 = 0.0; 17622f7816d4SBarry Smith sum12 = 0.0; 17632f7816d4SBarry Smith sum13 = 0.0; 17642f7816d4SBarry Smith sum14 = 0.0; 17652f7816d4SBarry Smith sum15 = 0.0; 17662f7816d4SBarry Smith sum16 = 0.0; 17672f7816d4SBarry Smith for (j=0; j<n; j++) { 17682f7816d4SBarry Smith sum1 += v[jrow]*x[16*idx[jrow]]; 17692f7816d4SBarry Smith sum2 += v[jrow]*x[16*idx[jrow]+1]; 17702f7816d4SBarry Smith sum3 += v[jrow]*x[16*idx[jrow]+2]; 17712f7816d4SBarry Smith sum4 += v[jrow]*x[16*idx[jrow]+3]; 17722f7816d4SBarry Smith sum5 += v[jrow]*x[16*idx[jrow]+4]; 17732f7816d4SBarry Smith sum6 += v[jrow]*x[16*idx[jrow]+5]; 17742f7816d4SBarry Smith sum7 += v[jrow]*x[16*idx[jrow]+6]; 17752f7816d4SBarry Smith sum8 += v[jrow]*x[16*idx[jrow]+7]; 17762f7816d4SBarry Smith sum9 += v[jrow]*x[16*idx[jrow]+8]; 17772f7816d4SBarry Smith sum10 += v[jrow]*x[16*idx[jrow]+9]; 17782f7816d4SBarry Smith sum11 += v[jrow]*x[16*idx[jrow]+10]; 17792f7816d4SBarry Smith sum12 += v[jrow]*x[16*idx[jrow]+11]; 17802f7816d4SBarry Smith sum13 += v[jrow]*x[16*idx[jrow]+12]; 17812f7816d4SBarry Smith sum14 += v[jrow]*x[16*idx[jrow]+13]; 17822f7816d4SBarry Smith sum15 += v[jrow]*x[16*idx[jrow]+14]; 17832f7816d4SBarry Smith sum16 += v[jrow]*x[16*idx[jrow]+15]; 17842f7816d4SBarry Smith jrow++; 17852f7816d4SBarry Smith } 17862f7816d4SBarry Smith y[16*i] += sum1; 17872f7816d4SBarry Smith y[16*i+1] += sum2; 17882f7816d4SBarry Smith y[16*i+2] += sum3; 17892f7816d4SBarry Smith y[16*i+3] += sum4; 17902f7816d4SBarry Smith y[16*i+4] += sum5; 17912f7816d4SBarry Smith y[16*i+5] += sum6; 17922f7816d4SBarry Smith y[16*i+6] += sum7; 17932f7816d4SBarry Smith y[16*i+7] += sum8; 17942f7816d4SBarry Smith y[16*i+8] += sum9; 17952f7816d4SBarry Smith y[16*i+9] += sum10; 17962f7816d4SBarry Smith y[16*i+10] += sum11; 17972f7816d4SBarry Smith y[16*i+11] += sum12; 17982f7816d4SBarry Smith y[16*i+12] += sum13; 17992f7816d4SBarry Smith y[16*i+13] += sum14; 18002f7816d4SBarry Smith y[16*i+14] += sum15; 18012f7816d4SBarry Smith y[16*i+15] += sum16; 18022f7816d4SBarry Smith } 18032f7816d4SBarry Smith 18042f7816d4SBarry Smith PetscLogFlops(32*a->nz); 18051ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 18061ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 18072f7816d4SBarry Smith PetscFunctionReturn(0); 18082f7816d4SBarry Smith } 18092f7816d4SBarry Smith 18102f7816d4SBarry Smith #undef __FUNCT__ 18112f7816d4SBarry Smith #define __FUNCT__ "MatMultTransposeAdd_SeqMAIJ_16" 1812dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqMAIJ_16(Mat A,Vec xx,Vec yy,Vec zz) 18132f7816d4SBarry Smith { 18142f7816d4SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 18152f7816d4SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ*)b->AIJ->data; 18162f7816d4SBarry Smith PetscScalar *x,*y,*v,alpha1,alpha2,alpha3,alpha4,alpha5,alpha6,alpha7,alpha8; 18172f7816d4SBarry Smith PetscScalar alpha9,alpha10,alpha11,alpha12,alpha13,alpha14,alpha15,alpha16; 1818dfbe8321SBarry Smith PetscErrorCode ierr; 1819b24ad042SBarry Smith PetscInt m = b->AIJ->m,n,i,*idx; 18202f7816d4SBarry Smith 18212f7816d4SBarry Smith PetscFunctionBegin; 18222f7816d4SBarry Smith if (yy != zz) {ierr = VecCopy(yy,zz);CHKERRQ(ierr);} 18231ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 18241ebc52fbSHong Zhang ierr = VecGetArray(zz,&y);CHKERRQ(ierr); 18252f7816d4SBarry Smith for (i=0; i<m; i++) { 1826bfec09a0SHong Zhang idx = a->j + a->i[i] ; 1827bfec09a0SHong Zhang v = a->a + a->i[i] ; 18282f7816d4SBarry Smith n = a->i[i+1] - a->i[i]; 18292f7816d4SBarry Smith alpha1 = x[16*i]; 18302f7816d4SBarry Smith alpha2 = x[16*i+1]; 18312f7816d4SBarry Smith alpha3 = x[16*i+2]; 18322f7816d4SBarry Smith alpha4 = x[16*i+3]; 18332f7816d4SBarry Smith alpha5 = x[16*i+4]; 18342f7816d4SBarry Smith alpha6 = x[16*i+5]; 18352f7816d4SBarry Smith alpha7 = x[16*i+6]; 18362f7816d4SBarry Smith alpha8 = x[16*i+7]; 18372f7816d4SBarry Smith alpha9 = x[16*i+8]; 18382f7816d4SBarry Smith alpha10 = x[16*i+9]; 18392f7816d4SBarry Smith alpha11 = x[16*i+10]; 18402f7816d4SBarry Smith alpha12 = x[16*i+11]; 18412f7816d4SBarry Smith alpha13 = x[16*i+12]; 18422f7816d4SBarry Smith alpha14 = x[16*i+13]; 18432f7816d4SBarry Smith alpha15 = x[16*i+14]; 18442f7816d4SBarry Smith alpha16 = x[16*i+15]; 18452f7816d4SBarry Smith while (n-->0) { 18462f7816d4SBarry Smith y[16*(*idx)] += alpha1*(*v); 18472f7816d4SBarry Smith y[16*(*idx)+1] += alpha2*(*v); 18482f7816d4SBarry Smith y[16*(*idx)+2] += alpha3*(*v); 18492f7816d4SBarry Smith y[16*(*idx)+3] += alpha4*(*v); 18502f7816d4SBarry Smith y[16*(*idx)+4] += alpha5*(*v); 18512f7816d4SBarry Smith y[16*(*idx)+5] += alpha6*(*v); 18522f7816d4SBarry Smith y[16*(*idx)+6] += alpha7*(*v); 18532f7816d4SBarry Smith y[16*(*idx)+7] += alpha8*(*v); 18542f7816d4SBarry Smith y[16*(*idx)+8] += alpha9*(*v); 18552f7816d4SBarry Smith y[16*(*idx)+9] += alpha10*(*v); 18562f7816d4SBarry Smith y[16*(*idx)+10] += alpha11*(*v); 18572f7816d4SBarry Smith y[16*(*idx)+11] += alpha12*(*v); 18582f7816d4SBarry Smith y[16*(*idx)+12] += alpha13*(*v); 18592f7816d4SBarry Smith y[16*(*idx)+13] += alpha14*(*v); 18602f7816d4SBarry Smith y[16*(*idx)+14] += alpha15*(*v); 18612f7816d4SBarry Smith y[16*(*idx)+15] += alpha16*(*v); 18622f7816d4SBarry Smith idx++; v++; 18632f7816d4SBarry Smith } 18642f7816d4SBarry Smith } 18652f7816d4SBarry Smith PetscLogFlops(32*a->nz); 18661ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 18671ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&y);CHKERRQ(ierr); 186866ed3db0SBarry Smith PetscFunctionReturn(0); 186966ed3db0SBarry Smith } 187066ed3db0SBarry Smith 1871f4a53059SBarry Smith /*===================================================================================*/ 18724a2ae208SSatish Balay #undef __FUNCT__ 18734a2ae208SSatish Balay #define __FUNCT__ "MatMult_MPIMAIJ_dof" 1874dfbe8321SBarry Smith PetscErrorCode MatMult_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 1875f4a53059SBarry Smith { 18764cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1877dfbe8321SBarry Smith PetscErrorCode ierr; 1878f4a53059SBarry Smith 1879b24ad042SBarry Smith PetscFunctionBegin; 1880f4a53059SBarry Smith /* start the scatter */ 1881f4a53059SBarry Smith ierr = VecScatterBegin(xx,b->w,INSERT_VALUES,SCATTER_FORWARD,b->ctx);CHKERRQ(ierr); 18824cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->mult)(b->AIJ,xx,yy);CHKERRQ(ierr); 1883f4a53059SBarry Smith ierr = VecScatterEnd(xx,b->w,INSERT_VALUES,SCATTER_FORWARD,b->ctx);CHKERRQ(ierr); 18844cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,yy,yy);CHKERRQ(ierr); 1885f4a53059SBarry Smith PetscFunctionReturn(0); 1886f4a53059SBarry Smith } 1887f4a53059SBarry Smith 18884a2ae208SSatish Balay #undef __FUNCT__ 18894a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_MPIMAIJ_dof" 1890dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIMAIJ_dof(Mat A,Vec xx,Vec yy) 18914cb9d9b8SBarry Smith { 18924cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1893dfbe8321SBarry Smith PetscErrorCode ierr; 1894b24ad042SBarry Smith 18954cb9d9b8SBarry Smith PetscFunctionBegin; 18964cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 18974cb9d9b8SBarry Smith ierr = (*b->AIJ->ops->multtranspose)(b->AIJ,xx,yy);CHKERRQ(ierr); 1898a5ff213dSBarry Smith ierr = VecScatterBegin(b->w,yy,ADD_VALUES,SCATTER_REVERSE,b->ctx);CHKERRQ(ierr); 18994cb9d9b8SBarry Smith ierr = VecScatterEnd(b->w,yy,ADD_VALUES,SCATTER_REVERSE,b->ctx);CHKERRQ(ierr); 19004cb9d9b8SBarry Smith PetscFunctionReturn(0); 19014cb9d9b8SBarry Smith } 19024cb9d9b8SBarry Smith 19034a2ae208SSatish Balay #undef __FUNCT__ 19044a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_MPIMAIJ_dof" 1905dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 19064cb9d9b8SBarry Smith { 19074cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1908dfbe8321SBarry Smith PetscErrorCode ierr; 19094cb9d9b8SBarry Smith 1910b24ad042SBarry Smith PetscFunctionBegin; 19114cb9d9b8SBarry Smith /* start the scatter */ 19124cb9d9b8SBarry Smith ierr = VecScatterBegin(xx,b->w,INSERT_VALUES,SCATTER_FORWARD,b->ctx);CHKERRQ(ierr); 1913d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 19144cb9d9b8SBarry Smith ierr = VecScatterEnd(xx,b->w,INSERT_VALUES,SCATTER_FORWARD,b->ctx);CHKERRQ(ierr); 1915717f2ec8SHong Zhang ierr = (*b->OAIJ->ops->multadd)(b->OAIJ,b->w,zz,zz);CHKERRQ(ierr); 19164cb9d9b8SBarry Smith PetscFunctionReturn(0); 19174cb9d9b8SBarry Smith } 19184cb9d9b8SBarry Smith 19194a2ae208SSatish Balay #undef __FUNCT__ 19204a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_MPIMAIJ_dof" 1921dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIMAIJ_dof(Mat A,Vec xx,Vec yy,Vec zz) 19224cb9d9b8SBarry Smith { 19234cb9d9b8SBarry Smith Mat_MPIMAIJ *b = (Mat_MPIMAIJ*)A->data; 1924dfbe8321SBarry Smith PetscErrorCode ierr; 1925b24ad042SBarry Smith 19264cb9d9b8SBarry Smith PetscFunctionBegin; 19274cb9d9b8SBarry Smith ierr = (*b->OAIJ->ops->multtranspose)(b->OAIJ,xx,b->w);CHKERRQ(ierr); 1928d72c5c08SBarry Smith ierr = VecScatterBegin(b->w,zz,ADD_VALUES,SCATTER_REVERSE,b->ctx);CHKERRQ(ierr); 1929d72c5c08SBarry Smith ierr = (*b->AIJ->ops->multtransposeadd)(b->AIJ,xx,yy,zz);CHKERRQ(ierr); 1930d72c5c08SBarry Smith ierr = VecScatterEnd(b->w,zz,ADD_VALUES,SCATTER_REVERSE,b->ctx);CHKERRQ(ierr); 19314cb9d9b8SBarry Smith PetscFunctionReturn(0); 19324cb9d9b8SBarry Smith } 19334cb9d9b8SBarry Smith 19349c4fc4c7SBarry Smith #undef __FUNCT__ 19357ba1a0bfSKris Buschelman #define __FUNCT__ "MatPtAPSymbolic_SeqAIJ_SeqMAIJ" 19367ba1a0bfSKris Buschelman PetscErrorCode MatPtAPSymbolic_SeqAIJ_SeqMAIJ(Mat A,Mat PP,PetscReal fill,Mat *C) 19377ba1a0bfSKris Buschelman { 19387ba1a0bfSKris Buschelman /* This routine requires testing -- but it's getting better. */ 19397ba1a0bfSKris Buschelman PetscErrorCode ierr; 19407ba1a0bfSKris Buschelman FreeSpaceList free_space=PETSC_NULL,current_space=PETSC_NULL; 19417ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp=(Mat_SeqMAIJ*)PP->data; 19427ba1a0bfSKris Buschelman Mat P=pp->AIJ; 19437ba1a0bfSKris Buschelman Mat_SeqAIJ *a=(Mat_SeqAIJ*)A->data,*p=(Mat_SeqAIJ*)P->data,*c; 19447ba1a0bfSKris Buschelman PetscInt *pti,*ptj,*ptJ,*ai=a->i,*aj=a->j,*ajj,*pi=p->i,*pj=p->j,*pjj; 19457ba1a0bfSKris Buschelman PetscInt *ci,*cj,*ptadenserow,*ptasparserow,*denserow,*sparserow,*ptaj; 19467ba1a0bfSKris Buschelman PetscInt an=A->N,am=A->M,pn=P->N,pm=P->M,ppdof=pp->dof,cn; 19477ba1a0bfSKris Buschelman PetscInt i,j,k,dof,pshift,ptnzi,arow,anzj,ptanzi,prow,pnzj,cnzi; 19487ba1a0bfSKris Buschelman MatScalar *ca; 19497ba1a0bfSKris Buschelman 19507ba1a0bfSKris Buschelman PetscFunctionBegin; 19517ba1a0bfSKris Buschelman /* Start timer */ 19527ba1a0bfSKris Buschelman ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,PP,0,0);CHKERRQ(ierr); 19537ba1a0bfSKris Buschelman 19547ba1a0bfSKris Buschelman /* Get ij structure of P^T */ 19557ba1a0bfSKris Buschelman ierr = MatGetSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 19567ba1a0bfSKris Buschelman 19577ba1a0bfSKris Buschelman cn = pn*ppdof; 19587ba1a0bfSKris Buschelman /* Allocate ci array, arrays for fill computation and */ 19597ba1a0bfSKris Buschelman /* free space for accumulating nonzero column info */ 19607ba1a0bfSKris Buschelman ierr = PetscMalloc((cn+1)*sizeof(PetscInt),&ci);CHKERRQ(ierr); 19617ba1a0bfSKris Buschelman ci[0] = 0; 19627ba1a0bfSKris Buschelman 19637ba1a0bfSKris Buschelman /* Work arrays for rows of P^T*A */ 19647ba1a0bfSKris Buschelman ierr = PetscMalloc((2*cn+2*an+1)*sizeof(PetscInt),&ptadenserow);CHKERRQ(ierr); 19657ba1a0bfSKris Buschelman ierr = PetscMemzero(ptadenserow,(2*cn+2*an+1)*sizeof(PetscInt));CHKERRQ(ierr); 19667ba1a0bfSKris Buschelman ptasparserow = ptadenserow + an; 19677ba1a0bfSKris Buschelman denserow = ptasparserow + an; 19687ba1a0bfSKris Buschelman sparserow = denserow + cn; 19697ba1a0bfSKris Buschelman 19707ba1a0bfSKris Buschelman /* Set initial free space to be nnz(A) scaled by aspect ratio of P. */ 19717ba1a0bfSKris Buschelman /* This should be reasonable if sparsity of PtAP is similar to that of A. */ 19727ba1a0bfSKris Buschelman /* Note, aspect ratio of P is the same as the aspect ratio of SeqAIJ inside P */ 19737ba1a0bfSKris Buschelman ierr = GetMoreSpace((ai[am]/pm)*pn,&free_space); 19747ba1a0bfSKris Buschelman current_space = free_space; 19757ba1a0bfSKris Buschelman 19767ba1a0bfSKris Buschelman /* Determine symbolic info for each row of C: */ 19777ba1a0bfSKris Buschelman for (i=0;i<pn;i++) { 19787ba1a0bfSKris Buschelman ptnzi = pti[i+1] - pti[i]; 19797ba1a0bfSKris Buschelman ptJ = ptj + pti[i]; 19807ba1a0bfSKris Buschelman for (dof=0;dof<ppdof;dof++) { 19817ba1a0bfSKris Buschelman ptanzi = 0; 19827ba1a0bfSKris Buschelman /* Determine symbolic row of PtA: */ 19837ba1a0bfSKris Buschelman for (j=0;j<ptnzi;j++) { 19847ba1a0bfSKris Buschelman /* Expand ptJ[j] by block size and shift by dof to get the right row of A */ 19857ba1a0bfSKris Buschelman arow = ptJ[j]*ppdof + dof; 19867ba1a0bfSKris Buschelman /* Nonzeros of P^T*A will be in same locations as any element of A in that row */ 19877ba1a0bfSKris Buschelman anzj = ai[arow+1] - ai[arow]; 19887ba1a0bfSKris Buschelman ajj = aj + ai[arow]; 19897ba1a0bfSKris Buschelman for (k=0;k<anzj;k++) { 19907ba1a0bfSKris Buschelman if (!ptadenserow[ajj[k]]) { 19917ba1a0bfSKris Buschelman ptadenserow[ajj[k]] = -1; 19927ba1a0bfSKris Buschelman ptasparserow[ptanzi++] = ajj[k]; 19937ba1a0bfSKris Buschelman } 19947ba1a0bfSKris Buschelman } 19957ba1a0bfSKris Buschelman } 19967ba1a0bfSKris Buschelman /* Using symbolic info for row of PtA, determine symbolic info for row of C: */ 19977ba1a0bfSKris Buschelman ptaj = ptasparserow; 19987ba1a0bfSKris Buschelman cnzi = 0; 19997ba1a0bfSKris Buschelman for (j=0;j<ptanzi;j++) { 20007ba1a0bfSKris Buschelman /* Get offset within block of P */ 20017ba1a0bfSKris Buschelman pshift = *ptaj%ppdof; 20027ba1a0bfSKris Buschelman /* Get block row of P */ 20037ba1a0bfSKris Buschelman prow = (*ptaj++)/ppdof; /* integer division */ 20047ba1a0bfSKris Buschelman /* P has same number of nonzeros per row as the compressed form */ 20057ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 20067ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 20077ba1a0bfSKris Buschelman for (k=0;k<pnzj;k++) { 20087ba1a0bfSKris Buschelman /* Locations in C are shifted by the offset within the block */ 20097ba1a0bfSKris Buschelman /* Note: we cannot use PetscLLAdd here because of the additional offset for the write location */ 20107ba1a0bfSKris Buschelman if (!denserow[pjj[k]*ppdof+pshift]) { 20117ba1a0bfSKris Buschelman denserow[pjj[k]*ppdof+pshift] = -1; 20127ba1a0bfSKris Buschelman sparserow[cnzi++] = pjj[k]*ppdof+pshift; 20137ba1a0bfSKris Buschelman } 20147ba1a0bfSKris Buschelman } 20157ba1a0bfSKris Buschelman } 20167ba1a0bfSKris Buschelman 20177ba1a0bfSKris Buschelman /* sort sparserow */ 20187ba1a0bfSKris Buschelman ierr = PetscSortInt(cnzi,sparserow);CHKERRQ(ierr); 20197ba1a0bfSKris Buschelman 20207ba1a0bfSKris Buschelman /* If free space is not available, make more free space */ 20217ba1a0bfSKris Buschelman /* Double the amount of total space in the list */ 20227ba1a0bfSKris Buschelman if (current_space->local_remaining<cnzi) { 20237ba1a0bfSKris Buschelman ierr = GetMoreSpace(current_space->total_array_size,¤t_space);CHKERRQ(ierr); 20247ba1a0bfSKris Buschelman } 20257ba1a0bfSKris Buschelman 20267ba1a0bfSKris Buschelman /* Copy data into free space, and zero out denserows */ 20277ba1a0bfSKris Buschelman ierr = PetscMemcpy(current_space->array,sparserow,cnzi*sizeof(PetscInt));CHKERRQ(ierr); 20287ba1a0bfSKris Buschelman current_space->array += cnzi; 20297ba1a0bfSKris Buschelman current_space->local_used += cnzi; 20307ba1a0bfSKris Buschelman current_space->local_remaining -= cnzi; 20317ba1a0bfSKris Buschelman 20327ba1a0bfSKris Buschelman for (j=0;j<ptanzi;j++) { 20337ba1a0bfSKris Buschelman ptadenserow[ptasparserow[j]] = 0; 20347ba1a0bfSKris Buschelman } 20357ba1a0bfSKris Buschelman for (j=0;j<cnzi;j++) { 20367ba1a0bfSKris Buschelman denserow[sparserow[j]] = 0; 20377ba1a0bfSKris Buschelman } 20387ba1a0bfSKris Buschelman /* Aside: Perhaps we should save the pta info for the numerical factorization. */ 20397ba1a0bfSKris Buschelman /* For now, we will recompute what is needed. */ 20407ba1a0bfSKris Buschelman ci[i*ppdof+1+dof] = ci[i*ppdof+dof] + cnzi; 20417ba1a0bfSKris Buschelman } 20427ba1a0bfSKris Buschelman } 20437ba1a0bfSKris Buschelman /* nnz is now stored in ci[ptm], column indices are in the list of free space */ 20447ba1a0bfSKris Buschelman /* Allocate space for cj, initialize cj, and */ 20457ba1a0bfSKris Buschelman /* destroy list of free space and other temporary array(s) */ 20467ba1a0bfSKris Buschelman ierr = PetscMalloc((ci[cn]+1)*sizeof(PetscInt),&cj);CHKERRQ(ierr); 20477ba1a0bfSKris Buschelman ierr = MakeSpaceContiguous(&free_space,cj);CHKERRQ(ierr); 20487ba1a0bfSKris Buschelman ierr = PetscFree(ptadenserow);CHKERRQ(ierr); 20497ba1a0bfSKris Buschelman 20507ba1a0bfSKris Buschelman /* Allocate space for ca */ 20517ba1a0bfSKris Buschelman ierr = PetscMalloc((ci[cn]+1)*sizeof(MatScalar),&ca);CHKERRQ(ierr); 20527ba1a0bfSKris Buschelman ierr = PetscMemzero(ca,(ci[cn]+1)*sizeof(MatScalar));CHKERRQ(ierr); 20537ba1a0bfSKris Buschelman 20547ba1a0bfSKris Buschelman /* put together the new matrix */ 20557ba1a0bfSKris Buschelman ierr = MatCreateSeqAIJWithArrays(A->comm,cn,cn,ci,cj,ca,C);CHKERRQ(ierr); 20567ba1a0bfSKris Buschelman 20577ba1a0bfSKris Buschelman /* MatCreateSeqAIJWithArrays flags matrix so PETSc doesn't free the user's arrays. */ 20587ba1a0bfSKris Buschelman /* Since these are PETSc arrays, change flags to free them as necessary. */ 20597ba1a0bfSKris Buschelman c = (Mat_SeqAIJ *)((*C)->data); 20607ba1a0bfSKris Buschelman c->freedata = PETSC_TRUE; 20617ba1a0bfSKris Buschelman c->nonew = 0; 20627ba1a0bfSKris Buschelman 20637ba1a0bfSKris Buschelman /* Clean up. */ 20647ba1a0bfSKris Buschelman ierr = MatRestoreSymbolicTranspose_SeqAIJ(P,&pti,&ptj);CHKERRQ(ierr); 20657ba1a0bfSKris Buschelman 20667ba1a0bfSKris Buschelman ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,PP,0,0);CHKERRQ(ierr); 20677ba1a0bfSKris Buschelman PetscFunctionReturn(0); 20687ba1a0bfSKris Buschelman } 20697ba1a0bfSKris Buschelman 20707ba1a0bfSKris Buschelman #undef __FUNCT__ 20717ba1a0bfSKris Buschelman #define __FUNCT__ "MatPtAPNumeric_SeqAIJ_SeqMAIJ" 20727ba1a0bfSKris Buschelman PetscErrorCode MatPtAPNumeric_SeqAIJ_SeqMAIJ(Mat A,Mat PP,Mat C) 20737ba1a0bfSKris Buschelman { 20747ba1a0bfSKris Buschelman /* This routine requires testing -- first draft only */ 20757ba1a0bfSKris Buschelman PetscErrorCode ierr; 20767ba1a0bfSKris Buschelman PetscInt flops=0; 20777ba1a0bfSKris Buschelman Mat_SeqMAIJ *pp=(Mat_SeqMAIJ*)PP->data; 20787ba1a0bfSKris Buschelman Mat P=pp->AIJ; 20797ba1a0bfSKris Buschelman Mat_SeqAIJ *a = (Mat_SeqAIJ *) A->data; 20807ba1a0bfSKris Buschelman Mat_SeqAIJ *p = (Mat_SeqAIJ *) P->data; 20817ba1a0bfSKris Buschelman Mat_SeqAIJ *c = (Mat_SeqAIJ *) C->data; 20827ba1a0bfSKris Buschelman PetscInt *ai=a->i,*aj=a->j,*apj,*apjdense,*pi=p->i,*pj=p->j,*pJ=p->j,*pjj; 20837ba1a0bfSKris Buschelman PetscInt *ci=c->i,*cj=c->j,*cjj; 20847ba1a0bfSKris Buschelman PetscInt am=A->M,cn=C->N,cm=C->M,ppdof=pp->dof; 20857ba1a0bfSKris Buschelman PetscInt i,j,k,pshift,poffset,anzi,pnzi,apnzj,nextap,pnzj,prow,crow; 20867ba1a0bfSKris Buschelman MatScalar *aa=a->a,*apa,*pa=p->a,*pA=p->a,*paj,*ca=c->a,*caj; 20877ba1a0bfSKris Buschelman 20887ba1a0bfSKris Buschelman PetscFunctionBegin; 20897ba1a0bfSKris Buschelman /* Allocate temporary array for storage of one row of A*P */ 20907ba1a0bfSKris Buschelman ierr = PetscMalloc(cn*(sizeof(MatScalar)+2*sizeof(PetscInt)),&apa);CHKERRQ(ierr); 20917ba1a0bfSKris Buschelman ierr = PetscMemzero(apa,cn*(sizeof(MatScalar)+2*sizeof(PetscInt)));CHKERRQ(ierr); 20927ba1a0bfSKris Buschelman 20937ba1a0bfSKris Buschelman apj = (PetscInt *)(apa + cn); 20947ba1a0bfSKris Buschelman apjdense = apj + cn; 20957ba1a0bfSKris Buschelman 20967ba1a0bfSKris Buschelman /* Clear old values in C */ 20977ba1a0bfSKris Buschelman ierr = PetscMemzero(ca,ci[cm]*sizeof(MatScalar));CHKERRQ(ierr); 20987ba1a0bfSKris Buschelman 20997ba1a0bfSKris Buschelman for (i=0;i<am;i++) { 21007ba1a0bfSKris Buschelman /* Form sparse row of A*P */ 21017ba1a0bfSKris Buschelman anzi = ai[i+1] - ai[i]; 21027ba1a0bfSKris Buschelman apnzj = 0; 21037ba1a0bfSKris Buschelman for (j=0;j<anzi;j++) { 21047ba1a0bfSKris Buschelman /* Get offset within block of P */ 21057ba1a0bfSKris Buschelman pshift = *aj%ppdof; 21067ba1a0bfSKris Buschelman /* Get block row of P */ 21077ba1a0bfSKris Buschelman prow = *aj++/ppdof; /* integer division */ 21087ba1a0bfSKris Buschelman pnzj = pi[prow+1] - pi[prow]; 21097ba1a0bfSKris Buschelman pjj = pj + pi[prow]; 21107ba1a0bfSKris Buschelman paj = pa + pi[prow]; 21117ba1a0bfSKris Buschelman for (k=0;k<pnzj;k++) { 21127ba1a0bfSKris Buschelman poffset = pjj[k]*ppdof+pshift; 21137ba1a0bfSKris Buschelman if (!apjdense[poffset]) { 21147ba1a0bfSKris Buschelman apjdense[poffset] = -1; 21157ba1a0bfSKris Buschelman apj[apnzj++] = poffset; 21167ba1a0bfSKris Buschelman } 21177ba1a0bfSKris Buschelman apa[poffset] += (*aa)*paj[k]; 21187ba1a0bfSKris Buschelman } 21197ba1a0bfSKris Buschelman flops += 2*pnzj; 21207ba1a0bfSKris Buschelman aa++; 21217ba1a0bfSKris Buschelman } 21227ba1a0bfSKris Buschelman 21237ba1a0bfSKris Buschelman /* Sort the j index array for quick sparse axpy. */ 21247ba1a0bfSKris Buschelman /* Note: a array does not need sorting as it is in dense storage locations. */ 21257ba1a0bfSKris Buschelman ierr = PetscSortInt(apnzj,apj);CHKERRQ(ierr); 21267ba1a0bfSKris Buschelman 21277ba1a0bfSKris Buschelman /* Compute P^T*A*P using outer product (P^T)[:,j]*(A*P)[j,:]. */ 21287ba1a0bfSKris Buschelman prow = i/ppdof; /* integer division */ 21297ba1a0bfSKris Buschelman pshift = i%ppdof; 21307ba1a0bfSKris Buschelman poffset = pi[prow]; 21317ba1a0bfSKris Buschelman pnzi = pi[prow+1] - poffset; 21327ba1a0bfSKris Buschelman /* Reset pJ and pA so we can traverse the same row of P 'dof' times. */ 21337ba1a0bfSKris Buschelman pJ = pj+poffset; 21347ba1a0bfSKris Buschelman pA = pa+poffset; 21357ba1a0bfSKris Buschelman for (j=0;j<pnzi;j++) { 21367ba1a0bfSKris Buschelman crow = (*pJ)*ppdof+pshift; 21377ba1a0bfSKris Buschelman cjj = cj + ci[crow]; 21387ba1a0bfSKris Buschelman caj = ca + ci[crow]; 21397ba1a0bfSKris Buschelman pJ++; 21407ba1a0bfSKris Buschelman /* Perform sparse axpy operation. Note cjj includes apj. */ 21417ba1a0bfSKris Buschelman for (k=0,nextap=0;nextap<apnzj;k++) { 21427ba1a0bfSKris Buschelman if (cjj[k]==apj[nextap]) { 21437ba1a0bfSKris Buschelman caj[k] += (*pA)*apa[apj[nextap++]]; 21447ba1a0bfSKris Buschelman } 21457ba1a0bfSKris Buschelman } 21467ba1a0bfSKris Buschelman flops += 2*apnzj; 21477ba1a0bfSKris Buschelman pA++; 21487ba1a0bfSKris Buschelman } 21497ba1a0bfSKris Buschelman 21507ba1a0bfSKris Buschelman /* Zero the current row info for A*P */ 21517ba1a0bfSKris Buschelman for (j=0;j<apnzj;j++) { 21527ba1a0bfSKris Buschelman apa[apj[j]] = 0.; 21537ba1a0bfSKris Buschelman apjdense[apj[j]] = 0; 21547ba1a0bfSKris Buschelman } 21557ba1a0bfSKris Buschelman } 21567ba1a0bfSKris Buschelman 21577ba1a0bfSKris Buschelman /* Assemble the final matrix and clean up */ 21587ba1a0bfSKris Buschelman ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 21597ba1a0bfSKris Buschelman ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 21607ba1a0bfSKris Buschelman ierr = PetscFree(apa);CHKERRQ(ierr); 21617ba1a0bfSKris Buschelman ierr = PetscLogFlops(flops);CHKERRQ(ierr); 21627ba1a0bfSKris Buschelman 21637ba1a0bfSKris Buschelman PetscFunctionReturn(0); 21647ba1a0bfSKris Buschelman } 21657ba1a0bfSKris Buschelman 21667ba1a0bfSKris Buschelman #undef __FUNCT__ 21670fd73130SBarry Smith #define __FUNCT__ "MatConvert_SeqMAIJ_SeqAIJ" 2168ceb03754SKris Buschelman PetscErrorCode MatConvert_SeqMAIJ_SeqAIJ(Mat A,const MatType newtype,MatReuse reuse,Mat *newmat) 21699c4fc4c7SBarry Smith { 21709c4fc4c7SBarry Smith Mat_SeqMAIJ *b = (Mat_SeqMAIJ*)A->data; 2171ceb03754SKris Buschelman Mat a = b->AIJ,B; 21729c4fc4c7SBarry Smith Mat_SeqAIJ *aij = (Mat_SeqAIJ*)a->data; 21739c4fc4c7SBarry Smith PetscErrorCode ierr; 21740fd73130SBarry Smith PetscInt m,n,i,ncols,*ilen,nmax = 0,*icols,j,k,ii,dof = b->dof; 2175ba8c8a56SBarry Smith PetscInt *cols; 2176ba8c8a56SBarry Smith PetscScalar *vals; 21779c4fc4c7SBarry Smith 21789c4fc4c7SBarry Smith PetscFunctionBegin; 21799c4fc4c7SBarry Smith ierr = MatGetSize(a,&m,&n);CHKERRQ(ierr); 21800fd73130SBarry Smith ierr = PetscMalloc(dof*m*sizeof(int),&ilen);CHKERRQ(ierr); 21819c4fc4c7SBarry Smith for (i=0; i<m; i++) { 21829c4fc4c7SBarry Smith nmax = PetscMax(nmax,aij->ilen[i]); 21830fd73130SBarry Smith for (j=0; j<dof; j++) { 21840fd73130SBarry Smith ilen[dof*i+j] = aij->ilen[i]; 21859c4fc4c7SBarry Smith } 21869c4fc4c7SBarry Smith } 2187ceb03754SKris Buschelman ierr = MatCreateSeqAIJ(PETSC_COMM_SELF,dof*m,dof*n,0,ilen,&B);CHKERRQ(ierr); 2188ceb03754SKris Buschelman ierr = MatSetOption(B,MAT_COLUMNS_SORTED);CHKERRQ(ierr); 21899c4fc4c7SBarry Smith ierr = PetscFree(ilen);CHKERRQ(ierr); 21909c4fc4c7SBarry Smith ierr = PetscMalloc(nmax*sizeof(PetscInt),&icols);CHKERRQ(ierr); 21919c4fc4c7SBarry Smith ii = 0; 21929c4fc4c7SBarry Smith for (i=0; i<m; i++) { 2193ba8c8a56SBarry Smith ierr = MatGetRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 21940fd73130SBarry Smith for (j=0; j<dof; j++) { 21959c4fc4c7SBarry Smith for (k=0; k<ncols; k++) { 21960fd73130SBarry Smith icols[k] = dof*cols[k]+j; 21979c4fc4c7SBarry Smith } 2198ceb03754SKris Buschelman ierr = MatSetValues_SeqAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 21999c4fc4c7SBarry Smith ii++; 22009c4fc4c7SBarry Smith } 2201ba8c8a56SBarry Smith ierr = MatRestoreRow_SeqAIJ(a,i,&ncols,&cols,&vals);CHKERRQ(ierr); 22029c4fc4c7SBarry Smith } 22039c4fc4c7SBarry Smith ierr = PetscFree(icols);CHKERRQ(ierr); 2204ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2205ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2206ceb03754SKris Buschelman 2207ceb03754SKris Buschelman if (reuse == MAT_REUSE_MATRIX) { 22088ab5b326SKris Buschelman ierr = MatHeaderReplace(A,B);CHKERRQ(ierr); 2209c3d102feSKris Buschelman } else { 2210ceb03754SKris Buschelman *newmat = B; 2211c3d102feSKris Buschelman } 22129c4fc4c7SBarry Smith PetscFunctionReturn(0); 22139c4fc4c7SBarry Smith } 22149c4fc4c7SBarry Smith 22150fd73130SBarry Smith #include "src/mat/impls/aij/mpi/mpiaij.h" 22160fd73130SBarry Smith #undef __FUNCT__ 22170fd73130SBarry Smith #define __FUNCT__ "MatConvert_MPIMAIJ_MPIAIJ" 2218ceb03754SKris Buschelman PetscErrorCode MatConvert_MPIMAIJ_MPIAIJ(Mat A,const MatType newtype,MatReuse reuse,Mat *newmat) 22190fd73130SBarry Smith { 22200fd73130SBarry Smith Mat_MPIMAIJ *maij = (Mat_MPIMAIJ*)A->data; 2221ceb03754SKris Buschelman Mat MatAIJ = ((Mat_SeqMAIJ*)maij->AIJ->data)->AIJ,B; 22220fd73130SBarry Smith Mat MatOAIJ = ((Mat_SeqMAIJ*)maij->OAIJ->data)->AIJ; 22230fd73130SBarry Smith Mat_SeqAIJ *AIJ = (Mat_SeqAIJ*) MatAIJ->data; 22240fd73130SBarry Smith Mat_SeqAIJ *OAIJ =(Mat_SeqAIJ*) MatOAIJ->data; 22250fd73130SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ*) maij->A->data; 22267a1a7badSBarry Smith PetscInt dof = maij->dof,i,j,*dnz,*onz,nmax = 0,onmax = 0,*oicols,*icols,ncols,*cols,oncols,*ocols; 22270fd73130SBarry Smith PetscInt rstart,cstart,*garray,ii,k; 22280fd73130SBarry Smith PetscErrorCode ierr; 22290fd73130SBarry Smith PetscScalar *vals,*ovals; 22300fd73130SBarry Smith 22310fd73130SBarry Smith PetscFunctionBegin; 22327a1a7badSBarry Smith ierr = PetscMalloc2(A->m,PetscInt,&dnz,A->m,PetscInt,&onz);CHKERRQ(ierr); 22330fd73130SBarry Smith for (i=0; i<A->m/dof; i++) { 22340fd73130SBarry Smith nmax = PetscMax(nmax,AIJ->ilen[i]); 22350fd73130SBarry Smith onmax = PetscMax(onmax,OAIJ->ilen[i]); 22360fd73130SBarry Smith for (j=0; j<dof; j++) { 22370fd73130SBarry Smith dnz[dof*i+j] = AIJ->ilen[i]; 22380fd73130SBarry Smith onz[dof*i+j] = OAIJ->ilen[i]; 22390fd73130SBarry Smith } 22400fd73130SBarry Smith } 2241ceb03754SKris Buschelman ierr = MatCreateMPIAIJ(A->comm,A->m,A->n,A->M,A->N,0,dnz,0,onz,&B);CHKERRQ(ierr); 2242ceb03754SKris Buschelman ierr = MatSetOption(B,MAT_COLUMNS_SORTED);CHKERRQ(ierr); 22430fd73130SBarry Smith ierr = PetscFree2(dnz,onz);CHKERRQ(ierr); 22440fd73130SBarry Smith 22457a1a7badSBarry Smith ierr = PetscMalloc2(nmax,PetscInt,&icols,onmax,PetscInt,&oicols);CHKERRQ(ierr); 22460fd73130SBarry Smith rstart = dof*mpiaij->rstart; 22470fd73130SBarry Smith cstart = dof*mpiaij->cstart; 22480fd73130SBarry Smith garray = mpiaij->garray; 22490fd73130SBarry Smith 22500fd73130SBarry Smith ii = rstart; 22510fd73130SBarry Smith for (i=0; i<A->m/dof; i++) { 22520fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 22530fd73130SBarry Smith ierr = MatGetRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 22540fd73130SBarry Smith for (j=0; j<dof; j++) { 22550fd73130SBarry Smith for (k=0; k<ncols; k++) { 22560fd73130SBarry Smith icols[k] = cstart + dof*cols[k]+j; 22570fd73130SBarry Smith } 22580fd73130SBarry Smith for (k=0; k<oncols; k++) { 22590fd73130SBarry Smith oicols[k] = dof*garray[ocols[k]]+j; 22600fd73130SBarry Smith } 2261ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,ncols,icols,vals,INSERT_VALUES);CHKERRQ(ierr); 2262ceb03754SKris Buschelman ierr = MatSetValues_MPIAIJ(B,1,&ii,oncols,oicols,ovals,INSERT_VALUES);CHKERRQ(ierr); 22630fd73130SBarry Smith ii++; 22640fd73130SBarry Smith } 22650fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatAIJ,i,&ncols,&cols,&vals);CHKERRQ(ierr); 22660fd73130SBarry Smith ierr = MatRestoreRow_SeqAIJ(MatOAIJ,i,&oncols,&ocols,&ovals);CHKERRQ(ierr); 22670fd73130SBarry Smith } 22680fd73130SBarry Smith ierr = PetscFree2(icols,oicols);CHKERRQ(ierr); 22690fd73130SBarry Smith 2270ceb03754SKris Buschelman ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2271ceb03754SKris Buschelman ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 2272ceb03754SKris Buschelman 2273ceb03754SKris Buschelman if (reuse == MAT_REUSE_MATRIX) { 22748ab5b326SKris Buschelman ierr = MatHeaderReplace(A,B);CHKERRQ(ierr); 2275c3d102feSKris Buschelman } else { 2276ceb03754SKris Buschelman *newmat = B; 2277c3d102feSKris Buschelman } 22780fd73130SBarry Smith PetscFunctionReturn(0); 22790fd73130SBarry Smith } 22800fd73130SBarry Smith 22810fd73130SBarry Smith 22820fd73130SBarry Smith 2283bcc973b7SBarry Smith /* ---------------------------------------------------------------------------------- */ 22845983afb6SSatish Balay /*MC 22850bad9183SKris Buschelman MatCreateMAIJ - Creates a matrix type providing restriction and interpolation 22860bad9183SKris Buschelman operations for multicomponent problems. It interpolates each component the same 22870bad9183SKris Buschelman way independently. The matrix type is based on MATSEQAIJ for sequential matrices, 22880bad9183SKris Buschelman and MATMPIAIJ for distributed matrices. 22890bad9183SKris Buschelman 22900bad9183SKris Buschelman Operations provided: 22910fd73130SBarry Smith + MatMult 22920bad9183SKris Buschelman . MatMultTranspose 22930bad9183SKris Buschelman . MatMultAdd 22940bad9183SKris Buschelman . MatMultTransposeAdd 22950fd73130SBarry Smith - MatView 22960bad9183SKris Buschelman 22970bad9183SKris Buschelman Level: advanced 22980bad9183SKris Buschelman 22990bad9183SKris Buschelman M*/ 23004a2ae208SSatish Balay #undef __FUNCT__ 23014a2ae208SSatish Balay #define __FUNCT__ "MatCreateMAIJ" 2302b24ad042SBarry Smith PetscErrorCode MatCreateMAIJ(Mat A,PetscInt dof,Mat *maij) 230382b1193eSBarry Smith { 2304dfbe8321SBarry Smith PetscErrorCode ierr; 2305b24ad042SBarry Smith PetscMPIInt size; 2306b24ad042SBarry Smith PetscInt n; 23074cb9d9b8SBarry Smith Mat_MPIMAIJ *b; 230882b1193eSBarry Smith Mat B; 230982b1193eSBarry Smith 231082b1193eSBarry Smith PetscFunctionBegin; 2311d72c5c08SBarry Smith ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); 2312d72c5c08SBarry Smith 2313d72c5c08SBarry Smith if (dof == 1) { 2314d72c5c08SBarry Smith *maij = A; 2315d72c5c08SBarry Smith } else { 231683903688SBarry Smith ierr = MatCreate(A->comm,dof*A->m,dof*A->n,dof*A->M,dof*A->N,&B);CHKERRQ(ierr); 2317cd3bbe55SBarry Smith B->assembled = PETSC_TRUE; 2318d72c5c08SBarry Smith 2319f4a53059SBarry Smith ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr); 2320f4a53059SBarry Smith if (size == 1) { 2321b9b97703SBarry Smith ierr = MatSetType(B,MATSEQMAIJ);CHKERRQ(ierr); 23224cb9d9b8SBarry Smith B->ops->destroy = MatDestroy_SeqMAIJ; 23230fd73130SBarry Smith B->ops->view = MatView_SeqMAIJ; 2324b9b97703SBarry Smith b = (Mat_MPIMAIJ*)B->data; 2325b9b97703SBarry Smith b->dof = dof; 23264cb9d9b8SBarry Smith b->AIJ = A; 2327d72c5c08SBarry Smith if (dof == 2) { 2328cd3bbe55SBarry Smith B->ops->mult = MatMult_SeqMAIJ_2; 2329cd3bbe55SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_2; 2330cd3bbe55SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_2; 2331cd3bbe55SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_2; 2332bcc973b7SBarry Smith } else if (dof == 3) { 2333bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_3; 2334bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_3; 2335bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_3; 2336bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_3; 2337bcc973b7SBarry Smith } else if (dof == 4) { 2338bcc973b7SBarry Smith B->ops->mult = MatMult_SeqMAIJ_4; 2339bcc973b7SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_4; 2340bcc973b7SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_4; 2341bcc973b7SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_4; 2342f9fae5adSBarry Smith } else if (dof == 5) { 2343f9fae5adSBarry Smith B->ops->mult = MatMult_SeqMAIJ_5; 2344f9fae5adSBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_5; 2345f9fae5adSBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_5; 2346f9fae5adSBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_5; 23476cd98798SBarry Smith } else if (dof == 6) { 23486cd98798SBarry Smith B->ops->mult = MatMult_SeqMAIJ_6; 23496cd98798SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_6; 23506cd98798SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_6; 23516cd98798SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_6; 2352*ed8eea03SBarry Smith } else if (dof == 7) { 2353*ed8eea03SBarry Smith B->ops->mult = MatMult_SeqMAIJ_7; 2354*ed8eea03SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_7; 2355*ed8eea03SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_7; 2356*ed8eea03SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_7; 235766ed3db0SBarry Smith } else if (dof == 8) { 235866ed3db0SBarry Smith B->ops->mult = MatMult_SeqMAIJ_8; 235966ed3db0SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_8; 236066ed3db0SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_8; 236166ed3db0SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_8; 23622b692628SMatthew Knepley } else if (dof == 9) { 23632b692628SMatthew Knepley B->ops->mult = MatMult_SeqMAIJ_9; 23642b692628SMatthew Knepley B->ops->multadd = MatMultAdd_SeqMAIJ_9; 23652b692628SMatthew Knepley B->ops->multtranspose = MatMultTranspose_SeqMAIJ_9; 23662b692628SMatthew Knepley B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_9; 23672f7816d4SBarry Smith } else if (dof == 16) { 23682f7816d4SBarry Smith B->ops->mult = MatMult_SeqMAIJ_16; 23692f7816d4SBarry Smith B->ops->multadd = MatMultAdd_SeqMAIJ_16; 23702f7816d4SBarry Smith B->ops->multtranspose = MatMultTranspose_SeqMAIJ_16; 23712f7816d4SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_SeqMAIJ_16; 237282b1193eSBarry Smith } else { 237377431f27SBarry Smith SETERRQ1(PETSC_ERR_SUP,"Cannot handle a dof of %D. Send request for code to petsc-maint@mcs.anl.gov\n",dof); 237482b1193eSBarry Smith } 23757ba1a0bfSKris Buschelman B->ops->ptapsymbolic_seqaij = MatPtAPSymbolic_SeqAIJ_SeqMAIJ; 23767ba1a0bfSKris Buschelman B->ops->ptapnumeric_seqaij = MatPtAPNumeric_SeqAIJ_SeqMAIJ; 23779c4fc4c7SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_seqmaij_seqaij_C","MatConvert_SeqMAIJ_SeqAIJ",MatConvert_SeqMAIJ_SeqAIJ);CHKERRQ(ierr); 2378f4a53059SBarry Smith } else { 2379f4a53059SBarry Smith Mat_MPIAIJ *mpiaij = (Mat_MPIAIJ *)A->data; 2380f4a53059SBarry Smith IS from,to; 2381f4a53059SBarry Smith Vec gvec; 2382b24ad042SBarry Smith PetscInt *garray,i; 2383f4a53059SBarry Smith 2384b9b97703SBarry Smith ierr = MatSetType(B,MATMPIMAIJ);CHKERRQ(ierr); 2385d72c5c08SBarry Smith B->ops->destroy = MatDestroy_MPIMAIJ; 23860fd73130SBarry Smith B->ops->view = MatView_MPIMAIJ; 2387b9b97703SBarry Smith b = (Mat_MPIMAIJ*)B->data; 2388b9b97703SBarry Smith b->dof = dof; 2389b9b97703SBarry Smith b->A = A; 23904cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->A,dof,&b->AIJ);CHKERRQ(ierr); 23914cb9d9b8SBarry Smith ierr = MatCreateMAIJ(mpiaij->B,dof,&b->OAIJ);CHKERRQ(ierr); 23924cb9d9b8SBarry Smith 2393f4a53059SBarry Smith ierr = VecGetSize(mpiaij->lvec,&n);CHKERRQ(ierr); 2394f4a53059SBarry Smith ierr = VecCreateSeq(PETSC_COMM_SELF,n*dof,&b->w);CHKERRQ(ierr); 239513288a74SBarry Smith ierr = VecSetBlockSize(b->w,dof);CHKERRQ(ierr); 2396f4a53059SBarry Smith 2397f4a53059SBarry Smith /* create two temporary Index sets for build scatter gather */ 2398b24ad042SBarry Smith ierr = PetscMalloc((n+1)*sizeof(PetscInt),&garray);CHKERRQ(ierr); 2399f4a53059SBarry Smith for (i=0; i<n; i++) garray[i] = dof*mpiaij->garray[i]; 2400f4a53059SBarry Smith ierr = ISCreateBlock(A->comm,dof,n,garray,&from);CHKERRQ(ierr); 2401f4a53059SBarry Smith ierr = PetscFree(garray);CHKERRQ(ierr); 2402f4a53059SBarry Smith ierr = ISCreateStride(PETSC_COMM_SELF,n*dof,0,1,&to);CHKERRQ(ierr); 2403f4a53059SBarry Smith 2404f4a53059SBarry Smith /* create temporary global vector to generate scatter context */ 2405f4a53059SBarry Smith ierr = VecCreateMPI(A->comm,dof*A->n,dof*A->N,&gvec);CHKERRQ(ierr); 240613288a74SBarry Smith ierr = VecSetBlockSize(gvec,dof);CHKERRQ(ierr); 2407f4a53059SBarry Smith 2408f4a53059SBarry Smith /* generate the scatter context */ 2409f4a53059SBarry Smith ierr = VecScatterCreate(gvec,from,b->w,to,&b->ctx);CHKERRQ(ierr); 2410f4a53059SBarry Smith 2411f4a53059SBarry Smith ierr = ISDestroy(from);CHKERRQ(ierr); 2412f4a53059SBarry Smith ierr = ISDestroy(to);CHKERRQ(ierr); 2413f4a53059SBarry Smith ierr = VecDestroy(gvec);CHKERRQ(ierr); 2414f4a53059SBarry Smith 2415f4a53059SBarry Smith B->ops->mult = MatMult_MPIMAIJ_dof; 24164cb9d9b8SBarry Smith B->ops->multtranspose = MatMultTranspose_MPIMAIJ_dof; 24174cb9d9b8SBarry Smith B->ops->multadd = MatMultAdd_MPIMAIJ_dof; 24184cb9d9b8SBarry Smith B->ops->multtransposeadd = MatMultTransposeAdd_MPIMAIJ_dof; 24190fd73130SBarry Smith ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_mpimaij_mpiaij_C","MatConvert_MPIMAIJ_MPIAIJ",MatConvert_MPIMAIJ_MPIAIJ);CHKERRQ(ierr); 2420f4a53059SBarry Smith } 2421cd3bbe55SBarry Smith *maij = B; 24220fd73130SBarry Smith ierr = MatView_Private(B);CHKERRQ(ierr); 2423d72c5c08SBarry Smith } 242482b1193eSBarry Smith PetscFunctionReturn(0); 242582b1193eSBarry Smith } 242682b1193eSBarry Smith 242782b1193eSBarry Smith 242882b1193eSBarry Smith 242982b1193eSBarry Smith 243082b1193eSBarry Smith 243182b1193eSBarry Smith 243282b1193eSBarry Smith 243382b1193eSBarry Smith 243482b1193eSBarry Smith 243582b1193eSBarry Smith 243682b1193eSBarry Smith 243782b1193eSBarry Smith 2438