xref: /petsc/src/mat/impls/mffd/mffd.c (revision c51ad4d444e46f231c316650da19e5770c6fae2b)
1e884886fSBarry Smith 
2af0996ceSBarry Smith #include <petsc/private/matimpl.h>
3c6db04a5SJed Brown #include <../src/mat/impls/mffd/mffdimpl.h>   /*I  "petscmat.h"   I*/
4e884886fSBarry Smith 
5140e18c1SBarry Smith PetscFunctionList MatMFFDList              = 0;
6ace3abfcSBarry Smith PetscBool         MatMFFDRegisterAllCalled = PETSC_FALSE;
7e884886fSBarry Smith 
87087cfbeSBarry Smith PetscClassId  MATMFFD_CLASSID;
9166c7f25SBarry Smith PetscLogEvent MATMFFD_Mult;
10e884886fSBarry Smith 
11ace3abfcSBarry Smith static PetscBool MatMFFDPackageInitialized = PETSC_FALSE;
12b022a5c1SBarry Smith /*@C
132390153bSJed Brown   MatMFFDFinalizePackage - This function destroys everything in the MatMFFD package. It is
14b022a5c1SBarry Smith   called from PetscFinalize().
15b022a5c1SBarry Smith 
16b022a5c1SBarry Smith   Level: developer
17b022a5c1SBarry Smith 
182390153bSJed Brown .keywords: Petsc, destroy, package
19755b7f64SBarry Smith .seealso: PetscFinalize(), MatCreateMFFD(), MatCreateSNESMF()
20b022a5c1SBarry Smith @*/
217087cfbeSBarry Smith PetscErrorCode  MatMFFDFinalizePackage(void)
22b022a5c1SBarry Smith {
23a703d84cSPatrick Lacasse   PetscErrorCode ierr;
24a703d84cSPatrick Lacasse 
25b022a5c1SBarry Smith   PetscFunctionBegin;
2637e93019SBarry Smith   ierr = PetscFunctionListDestroy(&MatMFFDList);CHKERRQ(ierr);
27b022a5c1SBarry Smith   MatMFFDPackageInitialized = PETSC_FALSE;
28b022a5c1SBarry Smith   MatMFFDRegisterAllCalled  = PETSC_FALSE;
29b022a5c1SBarry Smith   PetscFunctionReturn(0);
30b022a5c1SBarry Smith }
31b022a5c1SBarry Smith 
323ec795f1SBarry Smith /*@C
333ec795f1SBarry Smith   MatMFFDInitializePackage - This function initializes everything in the MatMFFD package. It is called
343ec795f1SBarry Smith   from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to MatCreate_MFFD()
353ec795f1SBarry Smith   when using static libraries.
363ec795f1SBarry Smith 
373ec795f1SBarry Smith   Level: developer
383ec795f1SBarry Smith 
393ec795f1SBarry Smith .keywords: Vec, initialize, package
403ec795f1SBarry Smith .seealso: PetscInitialize()
413ec795f1SBarry Smith @*/
42607a6623SBarry Smith PetscErrorCode  MatMFFDInitializePackage(void)
433ec795f1SBarry Smith {
443ec795f1SBarry Smith   char           logList[256];
453ec795f1SBarry Smith   char           *className;
46ace3abfcSBarry Smith   PetscBool      opt;
473ec795f1SBarry Smith   PetscErrorCode ierr;
483ec795f1SBarry Smith 
493ec795f1SBarry Smith   PetscFunctionBegin;
50b022a5c1SBarry Smith   if (MatMFFDPackageInitialized) PetscFunctionReturn(0);
51b022a5c1SBarry Smith   MatMFFDPackageInitialized = PETSC_TRUE;
523ec795f1SBarry Smith   /* Register Classes */
530700a824SBarry Smith   ierr = PetscClassIdRegister("MatMFFD",&MATMFFD_CLASSID);CHKERRQ(ierr);
543ec795f1SBarry Smith   /* Register Constructors */
55607a6623SBarry Smith   ierr = MatMFFDRegisterAll();CHKERRQ(ierr);
563ec795f1SBarry Smith   /* Register Events */
570700a824SBarry Smith   ierr = PetscLogEventRegister("MatMult MF",          MATMFFD_CLASSID,&MATMFFD_Mult);CHKERRQ(ierr);
583ec795f1SBarry Smith 
593ec795f1SBarry Smith   /* Process info exclusions */
60c5929fdfSBarry Smith   ierr = PetscOptionsGetString(NULL,NULL, "-info_exclude", logList, 256, &opt);CHKERRQ(ierr);
613ec795f1SBarry Smith   if (opt) {
623ec795f1SBarry Smith     ierr = PetscStrstr(logList, "matmffd", &className);CHKERRQ(ierr);
633ec795f1SBarry Smith     if (className) {
640700a824SBarry Smith       ierr = PetscInfoDeactivateClass(MATMFFD_CLASSID);CHKERRQ(ierr);
653ec795f1SBarry Smith     }
663ec795f1SBarry Smith   }
673ec795f1SBarry Smith   /* Process summary exclusions */
687bf5a629SBarry Smith   ierr = PetscOptionsGetString(NULL,NULL, "-log_exclude", logList, 256, &opt);CHKERRQ(ierr);
693ec795f1SBarry Smith   if (opt) {
703ec795f1SBarry Smith     ierr = PetscStrstr(logList, "matmffd", &className);CHKERRQ(ierr);
713ec795f1SBarry Smith     if (className) {
720700a824SBarry Smith       ierr = PetscLogEventDeactivateClass(MATMFFD_CLASSID);CHKERRQ(ierr);
733ec795f1SBarry Smith     }
743ec795f1SBarry Smith   }
75b022a5c1SBarry Smith   ierr = PetscRegisterFinalize(MatMFFDFinalizePackage);CHKERRQ(ierr);
763ec795f1SBarry Smith   PetscFunctionReturn(0);
773ec795f1SBarry Smith }
783ec795f1SBarry Smith 
79e884886fSBarry Smith /*@C
80e884886fSBarry Smith     MatMFFDSetType - Sets the method that is used to compute the
81e884886fSBarry Smith     differencing parameter for finite differene matrix-free formulations.
82e884886fSBarry Smith 
83e884886fSBarry Smith     Input Parameters:
84e884886fSBarry Smith +   mat - the "matrix-free" matrix created via MatCreateSNESMF(), or MatCreateMFFD()
85e884886fSBarry Smith           or MatSetType(mat,MATMFFD);
86e884886fSBarry Smith -   ftype - the type requested, either MATMFFD_WP or MATMFFD_DS
87e884886fSBarry Smith 
88e884886fSBarry Smith     Level: advanced
89e884886fSBarry Smith 
90e884886fSBarry Smith     Notes:
91e884886fSBarry Smith     For example, such routines can compute h for use in
92e884886fSBarry Smith     Jacobian-vector products of the form
93e884886fSBarry Smith 
94e884886fSBarry Smith                         F(x+ha) - F(x)
95e884886fSBarry Smith           F'(u)a  ~=  ----------------
96e884886fSBarry Smith                               h
97e884886fSBarry Smith 
98755b7f64SBarry Smith .seealso: MatCreateSNESMF(), MatMFFDRegister(), MatMFFDSetFunction(), MatCreateMFFD()
99e884886fSBarry Smith @*/
10019fd82e9SBarry Smith PetscErrorCode  MatMFFDSetType(Mat mat,MatMFFDType ftype)
101e884886fSBarry Smith {
102e884886fSBarry Smith   PetscErrorCode ierr,(*r)(MatMFFD);
103e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)mat->data;
104ace3abfcSBarry Smith   PetscBool      match;
105e884886fSBarry Smith 
106e884886fSBarry Smith   PetscFunctionBegin;
1070700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
108e884886fSBarry Smith   PetscValidCharPointer(ftype,2);
109e884886fSBarry Smith 
110251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)mat,MATMFFD,&match);CHKERRQ(ierr);
1119a13eae7SJed Brown   if (!match) PetscFunctionReturn(0);
1129a13eae7SJed Brown 
113e884886fSBarry Smith   /* already set, so just return */
114251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)ctx,ftype,&match);CHKERRQ(ierr);
115e884886fSBarry Smith   if (match) PetscFunctionReturn(0);
116e884886fSBarry Smith 
117e884886fSBarry Smith   /* destroy the old one if it exists */
118e884886fSBarry Smith   if (ctx->ops->destroy) {
119e884886fSBarry Smith     ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr);
120e884886fSBarry Smith   }
121e884886fSBarry Smith 
1221c9cd337SJed Brown   ierr =  PetscFunctionListFind(MatMFFDList,ftype,&r);CHKERRQ(ierr);
123e32f2f54SBarry Smith   if (!r) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_UNKNOWN_TYPE,"Unknown MatMFFD type %s given",ftype);
124e884886fSBarry Smith   ierr = (*r)(ctx);CHKERRQ(ierr);
125e884886fSBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)ctx,ftype);CHKERRQ(ierr);
126e884886fSBarry Smith   PetscFunctionReturn(0);
127e884886fSBarry Smith }
128e884886fSBarry Smith 
129e884886fSBarry Smith typedef PetscErrorCode (*FCN1)(void*,Vec); /* force argument to next function to not be extern C*/
13040244768SBarry Smith static PetscErrorCode  MatMFFDSetFunctioniBase_MFFD(Mat mat,FCN1 func)
131e884886fSBarry Smith {
132e884886fSBarry Smith   MatMFFD ctx = (MatMFFD)mat->data;
133e884886fSBarry Smith 
134e884886fSBarry Smith   PetscFunctionBegin;
135e884886fSBarry Smith   ctx->funcisetbase = func;
136e884886fSBarry Smith   PetscFunctionReturn(0);
137e884886fSBarry Smith }
138e884886fSBarry Smith 
139e884886fSBarry Smith typedef PetscErrorCode (*FCN2)(void*,PetscInt,Vec,PetscScalar*); /* force argument to next function to not be extern C*/
14040244768SBarry Smith static PetscErrorCode  MatMFFDSetFunctioni_MFFD(Mat mat,FCN2 funci)
141e884886fSBarry Smith {
142e884886fSBarry Smith   MatMFFD ctx = (MatMFFD)mat->data;
143e884886fSBarry Smith 
144e884886fSBarry Smith   PetscFunctionBegin;
145e884886fSBarry Smith   ctx->funci = funci;
146e884886fSBarry Smith   PetscFunctionReturn(0);
147e884886fSBarry Smith }
148e884886fSBarry Smith 
14940244768SBarry Smith static PetscErrorCode  MatMFFDResetHHistory_MFFD(Mat J)
150bc0f08ceSBarry Smith {
151bc0f08ceSBarry Smith   MatMFFD ctx = (MatMFFD)J->data;
152bc0f08ceSBarry Smith 
153bc0f08ceSBarry Smith   PetscFunctionBegin;
154bc0f08ceSBarry Smith   ctx->ncurrenth = 0;
155bc0f08ceSBarry Smith   PetscFunctionReturn(0);
156bc0f08ceSBarry Smith }
157e884886fSBarry Smith 
1581c84c290SBarry Smith /*@C
1591c84c290SBarry Smith    MatMFFDRegister - Adds a method to the MatMFFD registry.
1601c84c290SBarry Smith 
1611c84c290SBarry Smith    Not Collective
1621c84c290SBarry Smith 
1631c84c290SBarry Smith    Input Parameters:
1641c84c290SBarry Smith +  name_solver - name of a new user-defined compute-h module
1651c84c290SBarry Smith -  routine_create - routine to create method context
1661c84c290SBarry Smith 
1671c84c290SBarry Smith    Level: developer
1681c84c290SBarry Smith 
1691c84c290SBarry Smith    Notes:
1701c84c290SBarry Smith    MatMFFDRegister() may be called multiple times to add several user-defined solvers.
1711c84c290SBarry Smith 
1721c84c290SBarry Smith    Sample usage:
1731c84c290SBarry Smith .vb
174bdf89e91SBarry Smith    MatMFFDRegister("my_h",MyHCreate);
1751c84c290SBarry Smith .ve
1761c84c290SBarry Smith 
1771c84c290SBarry Smith    Then, your solver can be chosen with the procedural interface via
1781c84c290SBarry Smith $     MatMFFDSetType(mfctx,"my_h")
1791c84c290SBarry Smith    or at runtime via the option
180be7a6d03SBarry Smith $     -mat_mffd_type my_h
1811c84c290SBarry Smith 
1821c84c290SBarry Smith .keywords: MatMFFD, register
1831c84c290SBarry Smith 
1841c84c290SBarry Smith .seealso: MatMFFDRegisterAll(), MatMFFDRegisterDestroy()
1851c84c290SBarry Smith  @*/
186bdf89e91SBarry Smith PetscErrorCode  MatMFFDRegister(const char sname[],PetscErrorCode (*function)(MatMFFD))
187e884886fSBarry Smith {
188e884886fSBarry Smith   PetscErrorCode ierr;
189e884886fSBarry Smith 
190e884886fSBarry Smith   PetscFunctionBegin;
191a240a19fSJed Brown   ierr = PetscFunctionListAdd(&MatMFFDList,sname,function);CHKERRQ(ierr);
192e884886fSBarry Smith   PetscFunctionReturn(0);
193e884886fSBarry Smith }
194e884886fSBarry Smith 
195e884886fSBarry Smith /* ----------------------------------------------------------------------------------------*/
19640244768SBarry Smith static PetscErrorCode MatDestroy_MFFD(Mat mat)
197e884886fSBarry Smith {
198e884886fSBarry Smith   PetscErrorCode ierr;
199e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)mat->data;
200e884886fSBarry Smith 
201e884886fSBarry Smith   PetscFunctionBegin;
2026bf464f9SBarry Smith   ierr = VecDestroy(&ctx->w);CHKERRQ(ierr);
2036bf464f9SBarry Smith   ierr = VecDestroy(&ctx->drscale);CHKERRQ(ierr);
2046bf464f9SBarry Smith   ierr = VecDestroy(&ctx->dlscale);CHKERRQ(ierr);
2056bf464f9SBarry Smith   ierr = VecDestroy(&ctx->dshift);CHKERRQ(ierr);
206*c51ad4d4SStefano Zampini   ierr = VecDestroy(&ctx->dshiftw);CHKERRQ(ierr);
207*c51ad4d4SStefano Zampini   ierr = VecDestroy(&ctx->current_u);CHKERRQ(ierr);
208cfe22f5eSBarry Smith   if (ctx->current_f_allocated) {
2096bf464f9SBarry Smith     ierr = VecDestroy(&ctx->current_f);CHKERRQ(ierr);
210cfe22f5eSBarry Smith   }
211e884886fSBarry Smith   if (ctx->ops->destroy) {ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr);}
2126bf464f9SBarry Smith   ierr      = PetscHeaderDestroy(&ctx);CHKERRQ(ierr);
213bf0cc555SLisandro Dalcin   mat->data = 0;
214e884886fSBarry Smith 
215bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetBase_C",NULL);CHKERRQ(ierr);
216bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunctioniBase_C",NULL);CHKERRQ(ierr);
217bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunctioni_C",NULL);CHKERRQ(ierr);
218bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunction_C",NULL);CHKERRQ(ierr);
219bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunctionError_C",NULL);CHKERRQ(ierr);
220bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetCheckh_C",NULL);CHKERRQ(ierr);
221bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetPeriod_C",NULL);CHKERRQ(ierr);
222bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDResetHHistory_C",NULL);CHKERRQ(ierr);
223e884886fSBarry Smith   PetscFunctionReturn(0);
224e884886fSBarry Smith }
225e884886fSBarry Smith 
22688b4c220SStefano Zampini static PetscErrorCode MatSetUp_MFFD(Mat mat)
22788b4c220SStefano Zampini {
22888b4c220SStefano Zampini   PetscErrorCode ierr;
22988b4c220SStefano Zampini 
23088b4c220SStefano Zampini   PetscFunctionBegin;
23188b4c220SStefano Zampini   ierr = PetscLayoutSetUp(mat->rmap);CHKERRQ(ierr);
23288b4c220SStefano Zampini   ierr = PetscLayoutSetUp(mat->cmap);CHKERRQ(ierr);
23388b4c220SStefano Zampini   PetscFunctionReturn(0);
23488b4c220SStefano Zampini }
23588b4c220SStefano Zampini 
236e884886fSBarry Smith /*
237e884886fSBarry Smith    MatMFFDView_MFFD - Views matrix-free parameters.
238e884886fSBarry Smith 
239e884886fSBarry Smith */
24040244768SBarry Smith static PetscErrorCode MatView_MFFD(Mat J,PetscViewer viewer)
241e884886fSBarry Smith {
242e884886fSBarry Smith   PetscErrorCode ierr;
243e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)J->data;
244a283635eSDmitry Karpeev   PetscBool      iascii, viewbase, viewfunction;
245a283635eSDmitry Karpeev   const char     *prefix;
246e884886fSBarry Smith 
247e884886fSBarry Smith   PetscFunctionBegin;
248251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
249e884886fSBarry Smith   if (iascii) {
250a283635eSDmitry Karpeev     ierr = PetscViewerASCIIPrintf(viewer,"Matrix-free approximation:\n");CHKERRQ(ierr);
251a283635eSDmitry Karpeev     ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr);
25257622a8eSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"err=%g (relative error in function evaluation)\n",(double)ctx->error_rel);CHKERRQ(ierr);
2537adad957SLisandro Dalcin     if (!((PetscObject)ctx)->type_name) {
254e884886fSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"The compute h routine has not yet been set\n");CHKERRQ(ierr);
255e884886fSBarry Smith     } else {
2567adad957SLisandro Dalcin       ierr = PetscViewerASCIIPrintf(viewer,"Using %s compute h routine\n",((PetscObject)ctx)->type_name);CHKERRQ(ierr);
257e884886fSBarry Smith     }
258e884886fSBarry Smith     if (ctx->ops->view) {
259e884886fSBarry Smith       ierr = (*ctx->ops->view)(ctx,viewer);CHKERRQ(ierr);
260e884886fSBarry Smith     }
261a283635eSDmitry Karpeev     ierr = PetscObjectGetOptionsPrefix((PetscObject)J, &prefix);CHKERRQ(ierr);
262a283635eSDmitry Karpeev 
263c5929fdfSBarry Smith     ierr = PetscOptionsHasName(((PetscObject)J)->options,prefix, "-mat_mffd_view_base", &viewbase);CHKERRQ(ierr);
264a283635eSDmitry Karpeev     if (viewbase) {
265a283635eSDmitry Karpeev       ierr = PetscViewerASCIIPrintf(viewer, "Base:\n");CHKERRQ(ierr);
266a283635eSDmitry Karpeev       ierr = VecView(ctx->current_u, viewer);CHKERRQ(ierr);
267a283635eSDmitry Karpeev     }
268c5929fdfSBarry Smith     ierr = PetscOptionsHasName(((PetscObject)J)->options,prefix, "-mat_mffd_view_function", &viewfunction);CHKERRQ(ierr);
269a283635eSDmitry Karpeev     if (viewfunction) {
270a283635eSDmitry Karpeev       ierr = PetscViewerASCIIPrintf(viewer, "Function:\n");CHKERRQ(ierr);
271a283635eSDmitry Karpeev       ierr = VecView(ctx->current_f, viewer);CHKERRQ(ierr);
272a283635eSDmitry Karpeev     }
273a283635eSDmitry Karpeev     ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr);
27411aeaf0aSBarry Smith   }
275e884886fSBarry Smith   PetscFunctionReturn(0);
276e884886fSBarry Smith }
277e884886fSBarry Smith 
278e884886fSBarry Smith /*
279e884886fSBarry Smith    MatAssemblyEnd_MFFD - Resets the ctx->ncurrenth to zero. This
280e884886fSBarry Smith    allows the user to indicate the beginning of a new linear solve by calling
281e884886fSBarry Smith    MatAssemblyXXX() on the matrix free matrix. This then allows the
2821d0fab5eSBarry Smith    MatCreateMFFD_WP() to properly compute ||U|| only the first time
283e884886fSBarry Smith    in the linear solver rather than every time.
2845a576424SJed Brown 
285cc2e6a90SBarry Smith    This function is referenced directly from MatAssemblyEnd_SNESMF(), which may be in a different shared library hence
286cc2e6a90SBarry Smith    it must be labeled as PETSC_EXTERN
287e884886fSBarry Smith */
2885a576424SJed Brown PETSC_EXTERN PetscErrorCode MatAssemblyEnd_MFFD(Mat J,MatAssemblyType mt)
289e884886fSBarry Smith {
290e884886fSBarry Smith   PetscErrorCode ierr;
291e884886fSBarry Smith   MatMFFD        j = (MatMFFD)J->data;
292e884886fSBarry Smith 
293e884886fSBarry Smith   PetscFunctionBegin;
294e884886fSBarry Smith   ierr      = MatMFFDResetHHistory(J);CHKERRQ(ierr);
295e884886fSBarry Smith   j->vshift = 0.0;
296e884886fSBarry Smith   j->vscale = 1.0;
297e884886fSBarry Smith   PetscFunctionReturn(0);
298e884886fSBarry Smith }
299e884886fSBarry Smith 
300e884886fSBarry Smith /*
301e884886fSBarry Smith   MatMult_MFFD - Default matrix-free form for Jacobian-vector product, y = F'(u)*a:
302e884886fSBarry Smith 
303e884886fSBarry Smith         y ~= (F(u + ha) - F(u))/h,
304e884886fSBarry Smith   where F = nonlinear function, as set by SNESSetFunction()
305e884886fSBarry Smith         u = current iterate
306e884886fSBarry Smith         h = difference interval
307e884886fSBarry Smith */
30840244768SBarry Smith static PetscErrorCode MatMult_MFFD(Mat mat,Vec a,Vec y)
309e884886fSBarry Smith {
310e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)mat->data;
311e884886fSBarry Smith   PetscScalar    h;
312e884886fSBarry Smith   Vec            w,U,F;
313e884886fSBarry Smith   PetscErrorCode ierr;
314ace3abfcSBarry Smith   PetscBool      zeroa;
315e884886fSBarry Smith 
316e884886fSBarry Smith   PetscFunctionBegin;
317ce94432eSBarry Smith   if (!ctx->current_u) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ARG_WRONGSTATE,"MatMFFDSetBase() has not been called, this is often caused by forgetting to call \n\t\tMatAssemblyBegin/End on the first Mat in the SNES compute function");
318e884886fSBarry Smith   /* We log matrix-free matrix-vector products separately, so that we can
319e884886fSBarry Smith      separate the performance monitoring from the cases that use conventional
320e884886fSBarry Smith      storage.  We may eventually modify event logging to associate events
321e884886fSBarry Smith      with particular objects, hence alleviating the more general problem. */
322e884886fSBarry Smith   ierr = PetscLogEventBegin(MATMFFD_Mult,a,y,0,0);CHKERRQ(ierr);
323e884886fSBarry Smith 
324e884886fSBarry Smith   w = ctx->w;
325e884886fSBarry Smith   U = ctx->current_u;
3263ec795f1SBarry Smith   F = ctx->current_f;
327e884886fSBarry Smith   /*
328e884886fSBarry Smith       Compute differencing parameter
329e884886fSBarry Smith   */
3304a2f8832SBarry Smith   if (!((PetscObject)ctx)->type_name) {
331e884886fSBarry Smith     ierr = MatMFFDSetType(mat,MATMFFD_WP);CHKERRQ(ierr);
3329c6ac3b3SBarry Smith     ierr = MatSetFromOptions(mat);CHKERRQ(ierr);
333e884886fSBarry Smith   }
334e884886fSBarry Smith   ierr = (*ctx->ops->compute)(ctx,U,a,&h,&zeroa);CHKERRQ(ierr);
335e884886fSBarry Smith   if (zeroa) {
336e884886fSBarry Smith     ierr = VecSet(y,0.0);CHKERRQ(ierr);
337e884886fSBarry Smith     PetscFunctionReturn(0);
338e884886fSBarry Smith   }
339e884886fSBarry Smith 
34084d44b13SHong Zhang   if (mat->erroriffailure && PetscIsInfOrNanScalar(h)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Computed Nan differencing parameter h");
341e884886fSBarry Smith   if (ctx->checkh) {
342e884886fSBarry Smith     ierr = (*ctx->checkh)(ctx->checkhctx,U,a,&h);CHKERRQ(ierr);
343e884886fSBarry Smith   }
344e884886fSBarry Smith 
345e884886fSBarry Smith   /* keep a record of the current differencing parameter h */
346e884886fSBarry Smith   ctx->currenth = h;
347e884886fSBarry Smith #if defined(PETSC_USE_COMPLEX)
34857622a8eSBarry Smith   ierr = PetscInfo2(mat,"Current differencing parameter: %g + %g i\n",(double)PetscRealPart(h),(double)PetscImaginaryPart(h));CHKERRQ(ierr);
349e884886fSBarry Smith #else
350e884886fSBarry Smith   ierr = PetscInfo1(mat,"Current differencing parameter: %15.12e\n",h);CHKERRQ(ierr);
351e884886fSBarry Smith #endif
352e884886fSBarry Smith   if (ctx->historyh && ctx->ncurrenth < ctx->maxcurrenth) {
353e884886fSBarry Smith     ctx->historyh[ctx->ncurrenth] = h;
354e884886fSBarry Smith   }
355e884886fSBarry Smith   ctx->ncurrenth++;
356e884886fSBarry Smith 
357e884886fSBarry Smith   /* w = u + ha */
358c3bb7e23SBarry Smith   if (ctx->drscale) {
359c3bb7e23SBarry Smith     ierr = VecPointwiseMult(ctx->drscale,a,U);CHKERRQ(ierr);
360c3bb7e23SBarry Smith     ierr = VecAYPX(U,h,w);CHKERRQ(ierr);
361c3bb7e23SBarry Smith   } else {
362e884886fSBarry Smith     ierr = VecWAXPY(w,h,a,U);CHKERRQ(ierr);
363c3bb7e23SBarry Smith   }
364e884886fSBarry Smith 
3651b797266SDmitry Karpeev   /* compute func(U) as base for differencing; only needed first time in and not when provided by user */
3661b797266SDmitry Karpeev   if (ctx->ncurrenth == 1 && ctx->current_f_allocated) {
367e884886fSBarry Smith     ierr = (*ctx->func)(ctx->funcctx,U,F);CHKERRQ(ierr);
36852121784SBarry Smith   }
369e884886fSBarry Smith   ierr = (*ctx->func)(ctx->funcctx,w,y);CHKERRQ(ierr);
370e884886fSBarry Smith 
371e884886fSBarry Smith   ierr = VecAXPY(y,-1.0,F);CHKERRQ(ierr);
372e884886fSBarry Smith   ierr = VecScale(y,1.0/h);CHKERRQ(ierr);
373e884886fSBarry Smith 
374c35ec66cSMatthew G Knepley   if ((ctx->vshift != 0.0) || (ctx->vscale != 1.0)) {
375e884886fSBarry Smith     ierr = VecAXPBY(y,ctx->vshift,ctx->vscale,a);CHKERRQ(ierr);
376c3bb7e23SBarry Smith   }
377c3bb7e23SBarry Smith   if (ctx->dlscale) {
378c3bb7e23SBarry Smith     ierr = VecPointwiseMult(y,ctx->dlscale,y);CHKERRQ(ierr);
379c3bb7e23SBarry Smith   }
380c3bb7e23SBarry Smith   if (ctx->dshift) {
381*c51ad4d4SStefano Zampini     if (!ctx->dshiftw) {
382*c51ad4d4SStefano Zampini       ierr = VecDuplicate(y,&ctx->dshiftw);CHKERRQ(ierr);
383*c51ad4d4SStefano Zampini     }
384*c51ad4d4SStefano Zampini     ierr = VecPointwiseMult(ctx->dshift,a,ctx->dshiftw);CHKERRQ(ierr);
385*c51ad4d4SStefano Zampini     ierr = VecAXPY(y,1.0,ctx->dshiftw);CHKERRQ(ierr);
386c3bb7e23SBarry Smith   }
387e884886fSBarry Smith 
38839601f4eSBarry Smith   if (mat->nullsp) {ierr = MatNullSpaceRemove(mat->nullsp,y);CHKERRQ(ierr);}
389e884886fSBarry Smith 
390e884886fSBarry Smith   ierr = PetscLogEventEnd(MATMFFD_Mult,a,y,0,0);CHKERRQ(ierr);
391e884886fSBarry Smith   PetscFunctionReturn(0);
392e884886fSBarry Smith }
393e884886fSBarry Smith 
394e884886fSBarry Smith /*
395e884886fSBarry Smith   MatGetDiagonal_MFFD - Gets the diagonal for a matrix free matrix
396e884886fSBarry Smith 
397e884886fSBarry Smith         y ~= (F(u + ha) - F(u))/h,
398e884886fSBarry Smith   where F = nonlinear function, as set by SNESSetFunction()
399e884886fSBarry Smith         u = current iterate
400e884886fSBarry Smith         h = difference interval
401e884886fSBarry Smith */
40240244768SBarry Smith static PetscErrorCode MatGetDiagonal_MFFD(Mat mat,Vec a)
403e884886fSBarry Smith {
404e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)mat->data;
405e884886fSBarry Smith   PetscScalar    h,*aa,*ww,v;
406e884886fSBarry Smith   PetscReal      epsilon = PETSC_SQRT_MACHINE_EPSILON,umin = 100.0*PETSC_SQRT_MACHINE_EPSILON;
407e884886fSBarry Smith   Vec            w,U;
408e884886fSBarry Smith   PetscErrorCode ierr;
409e884886fSBarry Smith   PetscInt       i,rstart,rend;
410e884886fSBarry Smith 
411e884886fSBarry Smith   PetscFunctionBegin;
412e7e72b3dSBarry Smith   if (!ctx->funci) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Requires calling MatMFFDSetFunctioni() first");
413e884886fSBarry Smith 
414e884886fSBarry Smith   w    = ctx->w;
415e884886fSBarry Smith   U    = ctx->current_u;
416e884886fSBarry Smith   ierr = (*ctx->func)(ctx->funcctx,U,a);CHKERRQ(ierr);
417e884886fSBarry Smith   ierr = (*ctx->funcisetbase)(ctx->funcctx,U);CHKERRQ(ierr);
418e884886fSBarry Smith   ierr = VecCopy(U,w);CHKERRQ(ierr);
419e884886fSBarry Smith 
420e884886fSBarry Smith   ierr = VecGetOwnershipRange(a,&rstart,&rend);CHKERRQ(ierr);
421e884886fSBarry Smith   ierr = VecGetArray(a,&aa);CHKERRQ(ierr);
422e884886fSBarry Smith   for (i=rstart; i<rend; i++) {
423e884886fSBarry Smith     ierr = VecGetArray(w,&ww);CHKERRQ(ierr);
424e884886fSBarry Smith     h    = ww[i-rstart];
425e884886fSBarry Smith     if (h == 0.0) h = 1.0;
426e884886fSBarry Smith     if (PetscAbsScalar(h) < umin && PetscRealPart(h) >= 0.0)     h = umin;
427e884886fSBarry Smith     else if (PetscRealPart(h) < 0.0 && PetscAbsScalar(h) < umin) h = -umin;
428e884886fSBarry Smith     h *= epsilon;
429e884886fSBarry Smith 
430e884886fSBarry Smith     ww[i-rstart] += h;
431e884886fSBarry Smith     ierr          = VecRestoreArray(w,&ww);CHKERRQ(ierr);
432e884886fSBarry Smith     ierr          = (*ctx->funci)(ctx->funcctx,i,w,&v);CHKERRQ(ierr);
433e884886fSBarry Smith     aa[i-rstart]  = (v - aa[i-rstart])/h;
434e884886fSBarry Smith 
435e884886fSBarry Smith     /* possibly shift and scale result */
436c35ec66cSMatthew G Knepley     if ((ctx->vshift != 0.0) || (ctx->vscale != 1.0)) {
437e884886fSBarry Smith       aa[i - rstart] = ctx->vshift + ctx->vscale*aa[i-rstart];
438c3bb7e23SBarry Smith     }
439e884886fSBarry Smith 
440e884886fSBarry Smith     ierr          = VecGetArray(w,&ww);CHKERRQ(ierr);
441e884886fSBarry Smith     ww[i-rstart] -= h;
442e884886fSBarry Smith     ierr          = VecRestoreArray(w,&ww);CHKERRQ(ierr);
443e884886fSBarry Smith   }
444e884886fSBarry Smith   ierr = VecRestoreArray(a,&aa);CHKERRQ(ierr);
445e884886fSBarry Smith   PetscFunctionReturn(0);
446e884886fSBarry Smith }
447e884886fSBarry Smith 
44840244768SBarry Smith static PetscErrorCode MatDiagonalScale_MFFD(Mat mat,Vec ll,Vec rr)
449c3bb7e23SBarry Smith {
450c3bb7e23SBarry Smith   MatMFFD        aij = (MatMFFD)mat->data;
451c3bb7e23SBarry Smith   PetscErrorCode ierr;
452c3bb7e23SBarry Smith 
453c3bb7e23SBarry Smith   PetscFunctionBegin;
454c3bb7e23SBarry Smith   if (ll && !aij->dlscale) {
455c3bb7e23SBarry Smith     ierr = VecDuplicate(ll,&aij->dlscale);CHKERRQ(ierr);
456c3bb7e23SBarry Smith   }
457c3bb7e23SBarry Smith   if (rr && !aij->drscale) {
458c3bb7e23SBarry Smith     ierr = VecDuplicate(rr,&aij->drscale);CHKERRQ(ierr);
459c3bb7e23SBarry Smith   }
460c3bb7e23SBarry Smith   if (ll) {
461c3bb7e23SBarry Smith     ierr = VecCopy(ll,aij->dlscale);CHKERRQ(ierr);
462c3bb7e23SBarry Smith   }
463c3bb7e23SBarry Smith   if (rr) {
464c3bb7e23SBarry Smith     ierr = VecCopy(rr,aij->drscale);CHKERRQ(ierr);
465c3bb7e23SBarry Smith   }
466c3bb7e23SBarry Smith   PetscFunctionReturn(0);
467c3bb7e23SBarry Smith }
468c3bb7e23SBarry Smith 
46940244768SBarry Smith static PetscErrorCode MatDiagonalSet_MFFD(Mat mat,Vec ll,InsertMode mode)
470c3bb7e23SBarry Smith {
471c3bb7e23SBarry Smith   MatMFFD        aij = (MatMFFD)mat->data;
472c3bb7e23SBarry Smith   PetscErrorCode ierr;
473c3bb7e23SBarry Smith 
474c3bb7e23SBarry Smith   PetscFunctionBegin;
475ce94432eSBarry Smith   if (mode == INSERT_VALUES) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_SUP,"No diagonal set with INSERT_VALUES");
476c3bb7e23SBarry Smith   if (!aij->dshift) {
477c3bb7e23SBarry Smith     ierr = VecDuplicate(ll,&aij->dshift);CHKERRQ(ierr);
478c3bb7e23SBarry Smith   }
479c3bb7e23SBarry Smith   ierr = VecAXPY(aij->dshift,1.0,ll);CHKERRQ(ierr);
480c3bb7e23SBarry Smith   PetscFunctionReturn(0);
481c3bb7e23SBarry Smith }
482c3bb7e23SBarry Smith 
48340244768SBarry Smith static PetscErrorCode MatShift_MFFD(Mat Y,PetscScalar a)
484e884886fSBarry Smith {
485e884886fSBarry Smith   MatMFFD shell = (MatMFFD)Y->data;
4865fd66863SKarl Rupp 
487e884886fSBarry Smith   PetscFunctionBegin;
488e884886fSBarry Smith   shell->vshift += a;
489e884886fSBarry Smith   PetscFunctionReturn(0);
490e884886fSBarry Smith }
491e884886fSBarry Smith 
49240244768SBarry Smith static PetscErrorCode MatScale_MFFD(Mat Y,PetscScalar a)
493e884886fSBarry Smith {
494e884886fSBarry Smith   MatMFFD shell = (MatMFFD)Y->data;
4955fd66863SKarl Rupp 
496e884886fSBarry Smith   PetscFunctionBegin;
497e884886fSBarry Smith   shell->vscale *= a;
498e884886fSBarry Smith   PetscFunctionReturn(0);
499e884886fSBarry Smith }
500e884886fSBarry Smith 
501d8fa6a54SBarry Smith PETSC_EXTERN PetscErrorCode MatMFFDSetBase_MFFD(Mat J,Vec U,Vec F)
502e884886fSBarry Smith {
503e884886fSBarry Smith   PetscErrorCode ierr;
504e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)J->data;
505e884886fSBarry Smith 
506e884886fSBarry Smith   PetscFunctionBegin;
507e884886fSBarry Smith   ierr = MatMFFDResetHHistory(J);CHKERRQ(ierr);
508*c51ad4d4SStefano Zampini   if (!ctx->current_u) {
509*c51ad4d4SStefano Zampini     ierr = VecDuplicate(U,&ctx->current_u);CHKERRQ(ierr);
510*c51ad4d4SStefano Zampini     ierr = VecLockPush(ctx->current_u);CHKERRQ(ierr);
511*c51ad4d4SStefano Zampini   }
512*c51ad4d4SStefano Zampini   ierr = VecLockPop(ctx->current_u);CHKERRQ(ierr);
513*c51ad4d4SStefano Zampini   ierr = VecCopy(U,ctx->current_u);CHKERRQ(ierr);
514*c51ad4d4SStefano Zampini   ierr = VecLockPush(ctx->current_u);CHKERRQ(ierr);
51552121784SBarry Smith   if (F) {
5166bf464f9SBarry Smith     if (ctx->current_f_allocated) {ierr = VecDestroy(&ctx->current_f);CHKERRQ(ierr);}
5173ec795f1SBarry Smith     ctx->current_f           = F;
518cfe22f5eSBarry Smith     ctx->current_f_allocated = PETSC_FALSE;
519cfe22f5eSBarry Smith   } else if (!ctx->current_f_allocated) {
52006c4b6baSBarry Smith     ierr = MatCreateVecs(J,NULL,&ctx->current_f);CHKERRQ(ierr);
5212205254eSKarl Rupp 
522cfe22f5eSBarry Smith     ctx->current_f_allocated = PETSC_TRUE;
52352121784SBarry Smith   }
524e884886fSBarry Smith   if (!ctx->w) {
525e884886fSBarry Smith     ierr = VecDuplicate(ctx->current_u,&ctx->w);CHKERRQ(ierr);
526e884886fSBarry Smith   }
527e884886fSBarry Smith   J->assembled = PETSC_TRUE;
528e884886fSBarry Smith   PetscFunctionReturn(0);
529e884886fSBarry Smith }
5305a576424SJed Brown 
531e884886fSBarry Smith typedef PetscErrorCode (*FCN3)(void*,Vec,Vec,PetscScalar*); /* force argument to next function to not be extern C*/
532b2573a8aSBarry Smith 
53340244768SBarry Smith static PetscErrorCode  MatMFFDSetCheckh_MFFD(Mat J,FCN3 fun,void *ectx)
534e884886fSBarry Smith {
535e884886fSBarry Smith   MatMFFD ctx = (MatMFFD)J->data;
536e884886fSBarry Smith 
537e884886fSBarry Smith   PetscFunctionBegin;
538e884886fSBarry Smith   ctx->checkh    = fun;
539e884886fSBarry Smith   ctx->checkhctx = ectx;
540e884886fSBarry Smith   PetscFunctionReturn(0);
541e884886fSBarry Smith }
542e884886fSBarry Smith 
5436aa9148fSLisandro Dalcin /*@C
5446aa9148fSLisandro Dalcin    MatMFFDSetOptionsPrefix - Sets the prefix used for searching for all
5456aa9148fSLisandro Dalcin    MatMFFD options in the database.
5466aa9148fSLisandro Dalcin 
5476aa9148fSLisandro Dalcin    Collective on Mat
5486aa9148fSLisandro Dalcin 
5496aa9148fSLisandro Dalcin    Input Parameter:
5506aa9148fSLisandro Dalcin +  A - the Mat context
5516aa9148fSLisandro Dalcin -  prefix - the prefix to prepend to all option names
5526aa9148fSLisandro Dalcin 
5536aa9148fSLisandro Dalcin    Notes:
5546aa9148fSLisandro Dalcin    A hyphen (-) must NOT be given at the beginning of the prefix name.
5556aa9148fSLisandro Dalcin    The first character of all runtime options is AUTOMATICALLY the hyphen.
5566aa9148fSLisandro Dalcin 
5576aa9148fSLisandro Dalcin    Level: advanced
5586aa9148fSLisandro Dalcin 
5596aa9148fSLisandro Dalcin .keywords: SNES, matrix-free, parameters
5606aa9148fSLisandro Dalcin 
561755b7f64SBarry Smith .seealso: MatSetFromOptions(), MatCreateSNESMF(), MatCreateMFFD()
5626aa9148fSLisandro Dalcin @*/
5637087cfbeSBarry Smith PetscErrorCode  MatMFFDSetOptionsPrefix(Mat mat,const char prefix[])
5646aa9148fSLisandro Dalcin 
5656aa9148fSLisandro Dalcin {
5660298fd71SBarry Smith   MatMFFD        mfctx = mat ? (MatMFFD)mat->data : (MatMFFD)NULL;
5676aa9148fSLisandro Dalcin   PetscErrorCode ierr;
5685fd66863SKarl Rupp 
5696aa9148fSLisandro Dalcin   PetscFunctionBegin;
5700700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
5710700a824SBarry Smith   PetscValidHeaderSpecific(mfctx,MATMFFD_CLASSID,1);
5726aa9148fSLisandro Dalcin   ierr = PetscObjectSetOptionsPrefix((PetscObject)mfctx,prefix);CHKERRQ(ierr);
5736aa9148fSLisandro Dalcin   PetscFunctionReturn(0);
5746aa9148fSLisandro Dalcin }
5756aa9148fSLisandro Dalcin 
57640244768SBarry Smith static PetscErrorCode  MatSetFromOptions_MFFD(PetscOptionItems *PetscOptionsObject,Mat mat)
577e884886fSBarry Smith {
57871f08665SBarry Smith   MatMFFD        mfctx = (MatMFFD)mat->data;
579e884886fSBarry Smith   PetscErrorCode ierr;
580ace3abfcSBarry Smith   PetscBool      flg;
581e884886fSBarry Smith   char           ftype[256];
582e884886fSBarry Smith 
583e884886fSBarry Smith   PetscFunctionBegin;
5840700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
5850700a824SBarry Smith   PetscValidHeaderSpecific(mfctx,MATMFFD_CLASSID,1);
5863194b578SJed Brown   ierr = PetscObjectOptionsBegin((PetscObject)mfctx);CHKERRQ(ierr);
587a264d7a6SBarry Smith   ierr = PetscOptionsFList("-mat_mffd_type","Matrix free type","MatMFFDSetType",MatMFFDList,((PetscObject)mfctx)->type_name,ftype,256,&flg);CHKERRQ(ierr);
588e884886fSBarry Smith   if (flg) {
589e884886fSBarry Smith     ierr = MatMFFDSetType(mat,ftype);CHKERRQ(ierr);
590e884886fSBarry Smith   }
591e884886fSBarry Smith 
592e884886fSBarry Smith   ierr = PetscOptionsReal("-mat_mffd_err","set sqrt relative error in function","MatMFFDSetFunctionError",mfctx->error_rel,&mfctx->error_rel,0);CHKERRQ(ierr);
593e884886fSBarry Smith   ierr = PetscOptionsInt("-mat_mffd_period","how often h is recomputed","MatMFFDSetPeriod",mfctx->recomputeperiod,&mfctx->recomputeperiod,0);CHKERRQ(ierr);
594e884886fSBarry Smith 
59590d69ab7SBarry Smith   flg  = PETSC_FALSE;
5960298fd71SBarry Smith   ierr = PetscOptionsBool("-mat_mffd_check_positivity","Insure that U + h*a is nonnegative","MatMFFDSetCheckh",flg,&flg,NULL);CHKERRQ(ierr);
597e884886fSBarry Smith   if (flg) {
598e884886fSBarry Smith     ierr = MatMFFDSetCheckh(mat,MatMFFDCheckPositivity,0);CHKERRQ(ierr);
599e884886fSBarry Smith   }
600e884886fSBarry Smith   if (mfctx->ops->setfromoptions) {
601e55864a3SBarry Smith     ierr = (*mfctx->ops->setfromoptions)(PetscOptionsObject,mfctx);CHKERRQ(ierr);
602e884886fSBarry Smith   }
603e884886fSBarry Smith   ierr = PetscOptionsEnd();CHKERRQ(ierr);
604e884886fSBarry Smith   PetscFunctionReturn(0);
605e884886fSBarry Smith }
606e884886fSBarry Smith 
60740244768SBarry Smith static PetscErrorCode  MatMFFDSetPeriod_MFFD(Mat mat,PetscInt period)
608bc0f08ceSBarry Smith {
609bc0f08ceSBarry Smith   MatMFFD ctx = (MatMFFD)mat->data;
610bc0f08ceSBarry Smith 
611bc0f08ceSBarry Smith   PetscFunctionBegin;
612bc0f08ceSBarry Smith   ctx->recomputeperiod = period;
613bc0f08ceSBarry Smith   PetscFunctionReturn(0);
614bc0f08ceSBarry Smith }
615bc0f08ceSBarry Smith 
61640244768SBarry Smith static PetscErrorCode  MatMFFDSetFunction_MFFD(Mat mat,PetscErrorCode (*func)(void*,Vec,Vec),void *funcctx)
617bc0f08ceSBarry Smith {
618bc0f08ceSBarry Smith   MatMFFD ctx = (MatMFFD)mat->data;
619bc0f08ceSBarry Smith 
620bc0f08ceSBarry Smith   PetscFunctionBegin;
621bc0f08ceSBarry Smith   ctx->func    = func;
622bc0f08ceSBarry Smith   ctx->funcctx = funcctx;
623bc0f08ceSBarry Smith   PetscFunctionReturn(0);
624bc0f08ceSBarry Smith }
625bc0f08ceSBarry Smith 
62640244768SBarry Smith static PetscErrorCode  MatMFFDSetFunctionError_MFFD(Mat mat,PetscReal error)
627bc0f08ceSBarry Smith {
628bc0f08ceSBarry Smith   MatMFFD ctx = (MatMFFD)mat->data;
629bc0f08ceSBarry Smith 
630bc0f08ceSBarry Smith   PetscFunctionBegin;
631bc0f08ceSBarry Smith   if (error != PETSC_DEFAULT) ctx->error_rel = error;
632bc0f08ceSBarry Smith   PetscFunctionReturn(0);
633bc0f08ceSBarry Smith }
634bc0f08ceSBarry Smith 
6353b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MFFD(Mat A,PetscBool  *missing,PetscInt *d)
6363b49f96aSBarry Smith {
6373b49f96aSBarry Smith   PetscFunctionBegin;
6383b49f96aSBarry Smith   *missing = PETSC_FALSE;
6393b49f96aSBarry Smith   PetscFunctionReturn(0);
6403b49f96aSBarry Smith }
6413b49f96aSBarry Smith 
642e884886fSBarry Smith /*MC
643e884886fSBarry Smith   MATMFFD - MATMFFD = "mffd" - A matrix free matrix type.
644e884886fSBarry Smith 
645e884886fSBarry Smith   Level: advanced
646e884886fSBarry Smith 
647755b7f64SBarry Smith .seealso: MatCreateMFFD(), MatCreateSNESMF(), MatMFFDSetFunction(), MatMFFDSetType(),
648755b7f64SBarry Smith           MatMFFDSetFunctionError(), MatMFFDDSSetUmin(), MatMFFDSetFunction()
649755b7f64SBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory(), MatCreateSNESMF(),
650755b7f64SBarry Smith           MatMFFDGetH(),
651e884886fSBarry Smith M*/
6528cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MFFD(Mat A)
653e884886fSBarry Smith {
654e884886fSBarry Smith   MatMFFD        mfctx;
655e884886fSBarry Smith   PetscErrorCode ierr;
656e884886fSBarry Smith 
657e884886fSBarry Smith   PetscFunctionBegin;
658607a6623SBarry Smith   ierr = MatMFFDInitializePackage();CHKERRQ(ierr);
659e884886fSBarry Smith 
66073107ff1SLisandro Dalcin   ierr = PetscHeaderCreate(mfctx,MATMFFD_CLASSID,"MatMFFD","Matrix-free Finite Differencing","Mat",PetscObjectComm((PetscObject)A),MatDestroy_MFFD,MatView_MFFD);CHKERRQ(ierr);
6612205254eSKarl Rupp 
662e884886fSBarry Smith   mfctx->error_rel                = PETSC_SQRT_MACHINE_EPSILON;
663e884886fSBarry Smith   mfctx->recomputeperiod          = 1;
664e884886fSBarry Smith   mfctx->count                    = 0;
665e884886fSBarry Smith   mfctx->currenth                 = 0.0;
6660298fd71SBarry Smith   mfctx->historyh                 = NULL;
667e884886fSBarry Smith   mfctx->ncurrenth                = 0;
668e884886fSBarry Smith   mfctx->maxcurrenth              = 0;
6697adad957SLisandro Dalcin   ((PetscObject)mfctx)->type_name = 0;
670e884886fSBarry Smith 
671e884886fSBarry Smith   mfctx->vshift = 0.0;
672e884886fSBarry Smith   mfctx->vscale = 1.0;
673e884886fSBarry Smith 
674e884886fSBarry Smith   /*
675e884886fSBarry Smith      Create the empty data structure to contain compute-h routines.
676e884886fSBarry Smith      These will be filled in below from the command line options or
677e884886fSBarry Smith      a later call with MatMFFDSetType() or if that is not called
678e884886fSBarry Smith      then it will default in the first use of MatMult_MFFD()
679e884886fSBarry Smith   */
680e884886fSBarry Smith   mfctx->ops->compute        = 0;
681e884886fSBarry Smith   mfctx->ops->destroy        = 0;
682e884886fSBarry Smith   mfctx->ops->view           = 0;
683e884886fSBarry Smith   mfctx->ops->setfromoptions = 0;
684e884886fSBarry Smith   mfctx->hctx                = 0;
685e884886fSBarry Smith 
686e884886fSBarry Smith   mfctx->func    = 0;
687e884886fSBarry Smith   mfctx->funcctx = 0;
6880298fd71SBarry Smith   mfctx->w       = NULL;
689e884886fSBarry Smith 
690e884886fSBarry Smith   A->data = mfctx;
691e884886fSBarry Smith 
692e884886fSBarry Smith   A->ops->mult            = MatMult_MFFD;
693e884886fSBarry Smith   A->ops->destroy         = MatDestroy_MFFD;
69488b4c220SStefano Zampini   A->ops->setup           = MatSetUp_MFFD;
695e884886fSBarry Smith   A->ops->view            = MatView_MFFD;
696e884886fSBarry Smith   A->ops->assemblyend     = MatAssemblyEnd_MFFD;
697e884886fSBarry Smith   A->ops->getdiagonal     = MatGetDiagonal_MFFD;
698e884886fSBarry Smith   A->ops->scale           = MatScale_MFFD;
699e884886fSBarry Smith   A->ops->shift           = MatShift_MFFD;
700c3bb7e23SBarry Smith   A->ops->diagonalscale   = MatDiagonalScale_MFFD;
701c3bb7e23SBarry Smith   A->ops->diagonalset     = MatDiagonalSet_MFFD;
7029c6ac3b3SBarry Smith   A->ops->setfromoptions  = MatSetFromOptions_MFFD;
7033b49f96aSBarry Smith   A->ops->missingdiagonal = MatMissingDiagonal_MFFD;
704e884886fSBarry Smith   A->assembled            = PETSC_TRUE;
705e884886fSBarry Smith 
706bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetBase_C",MatMFFDSetBase_MFFD);CHKERRQ(ierr);
707bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunctioniBase_C",MatMFFDSetFunctioniBase_MFFD);CHKERRQ(ierr);
708bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunctioni_C",MatMFFDSetFunctioni_MFFD);CHKERRQ(ierr);
709bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunction_C",MatMFFDSetFunction_MFFD);CHKERRQ(ierr);
710bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetCheckh_C",MatMFFDSetCheckh_MFFD);CHKERRQ(ierr);
711bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetPeriod_C",MatMFFDSetPeriod_MFFD);CHKERRQ(ierr);
712bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunctionError_C",MatMFFDSetFunctionError_MFFD);CHKERRQ(ierr);
713bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDResetHHistory_C",MatMFFDResetHHistory_MFFD);CHKERRQ(ierr);
7142205254eSKarl Rupp 
715e884886fSBarry Smith   mfctx->mat = A;
7162205254eSKarl Rupp 
717e884886fSBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)A,MATMFFD);CHKERRQ(ierr);
718e884886fSBarry Smith   PetscFunctionReturn(0);
719e884886fSBarry Smith }
720e884886fSBarry Smith 
721e884886fSBarry Smith /*@
722e884886fSBarry Smith    MatCreateMFFD - Creates a matrix-free matrix. See also MatCreateSNESMF()
723e884886fSBarry Smith 
724e884886fSBarry Smith    Collective on Vec
725e884886fSBarry Smith 
726e884886fSBarry Smith    Input Parameters:
727fef1beadSBarry Smith +  comm - MPI communicator
728fef1beadSBarry Smith .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
729fef1beadSBarry Smith            This value should be the same as the local size used in creating the
730fef1beadSBarry Smith            y vector for the matrix-vector product y = Ax.
731fef1beadSBarry Smith .  n - This value should be the same as the local size used in creating the
732fef1beadSBarry Smith        x vector for the matrix-vector product y = Ax. (or PETSC_DECIDE to have
733fef1beadSBarry Smith        calculated if N is given) For square matrices n is almost always m.
734fef1beadSBarry Smith .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
735fef1beadSBarry Smith -  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
736fef1beadSBarry Smith 
737e884886fSBarry Smith 
738e884886fSBarry Smith    Output Parameter:
739e884886fSBarry Smith .  J - the matrix-free matrix
740e884886fSBarry Smith 
7419c6ac3b3SBarry Smith    Options Database Keys: call MatSetFromOptions() to trigger these
7429c6ac3b3SBarry Smith +  -mat_mffd_type - wp or ds (see MATMFFD_WP or MATMFFD_DS)
7439c6ac3b3SBarry Smith -  -mat_mffd_err - square root of estimated relative error in function evaluation
7449c6ac3b3SBarry Smith -  -mat_mffd_period - how often h is recomputed, defaults to 1, everytime
7459c6ac3b3SBarry Smith 
7469c6ac3b3SBarry Smith 
747e884886fSBarry Smith    Level: advanced
748e884886fSBarry Smith 
749e884886fSBarry Smith    Notes:
750e884886fSBarry Smith    The matrix-free matrix context merely contains the function pointers
751e884886fSBarry Smith    and work space for performing finite difference approximations of
752e884886fSBarry Smith    Jacobian-vector products, F'(u)*a,
753e884886fSBarry Smith 
754e884886fSBarry Smith    The default code uses the following approach to compute h
755e884886fSBarry Smith 
756e884886fSBarry Smith .vb
757e884886fSBarry Smith      F'(u)*a = [F(u+h*a) - F(u)]/h where
758e884886fSBarry Smith      h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
759e884886fSBarry Smith        = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   otherwise
760e884886fSBarry Smith  where
761e884886fSBarry Smith      error_rel = square root of relative error in function evaluation
762e884886fSBarry Smith      umin = minimum iterate parameter
763e884886fSBarry Smith .ve
764e884886fSBarry Smith 
765ca93e954SBarry Smith    You can call SNESSetJacobian() with MatMFFDComputeJacobian() if you are using matrix and not a different
766ca93e954SBarry Smith    preconditioner matrix
767ca93e954SBarry Smith 
768e884886fSBarry Smith    The user can set the error_rel via MatMFFDSetFunctionError() and
769a7f22e61SSatish Balay    umin via MatMFFDDSSetUmin(); see Users-Manual: ch_snes for details.
770e884886fSBarry Smith 
771e884886fSBarry Smith    The user should call MatDestroy() when finished with the matrix-free
772e884886fSBarry Smith    matrix context.
773e884886fSBarry Smith 
774e884886fSBarry Smith    Options Database Keys:
775e884886fSBarry Smith +  -mat_mffd_err <error_rel> - Sets error_rel
776e884886fSBarry Smith .  -mat_mffd_unim <umin> - Sets umin (for default PETSc routine that computes h only)
777e884886fSBarry Smith -  -mat_mffd_check_positivity
778e884886fSBarry Smith 
779e884886fSBarry Smith .keywords: default, matrix-free, create, matrix
780e884886fSBarry Smith 
7811d0fab5eSBarry Smith .seealso: MatDestroy(), MatMFFDSetFunctionError(), MatMFFDDSSetUmin(), MatMFFDSetFunction()
782e884886fSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory(), MatCreateSNESMF(),
78381242352SJed Brown           MatMFFDGetH(), MatMFFDRegister(), MatMFFDComputeJacobian()
784e884886fSBarry Smith 
785e884886fSBarry Smith @*/
7867087cfbeSBarry Smith PetscErrorCode  MatCreateMFFD(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,Mat *J)
787e884886fSBarry Smith {
788e884886fSBarry Smith   PetscErrorCode ierr;
789e884886fSBarry Smith 
790e884886fSBarry Smith   PetscFunctionBegin;
791e884886fSBarry Smith   ierr = MatCreate(comm,J);CHKERRQ(ierr);
792fef1beadSBarry Smith   ierr = MatSetSizes(*J,m,n,M,N);CHKERRQ(ierr);
793e884886fSBarry Smith   ierr = MatSetType(*J,MATMFFD);CHKERRQ(ierr);
794be7c243fSJed Brown   ierr = MatSetUp(*J);CHKERRQ(ierr);
795e884886fSBarry Smith   PetscFunctionReturn(0);
796e884886fSBarry Smith }
797e884886fSBarry Smith 
798e884886fSBarry Smith /*@
799e884886fSBarry Smith    MatMFFDGetH - Gets the last value that was used as the differencing
800e884886fSBarry Smith    parameter.
801e884886fSBarry Smith 
802e884886fSBarry Smith    Not Collective
803e884886fSBarry Smith 
804e884886fSBarry Smith    Input Parameters:
805e884886fSBarry Smith .  mat - the matrix obtained with MatCreateSNESMF()
806e884886fSBarry Smith 
807e884886fSBarry Smith    Output Paramter:
808e884886fSBarry Smith .  h - the differencing step size
809e884886fSBarry Smith 
810e884886fSBarry Smith    Level: advanced
811e884886fSBarry Smith 
812e884886fSBarry Smith .keywords: SNES, matrix-free, parameters
813e884886fSBarry Smith 
8141d0fab5eSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDSetHHistory(), MatCreateMFFD(), MATMFFD, MatMFFDResetHHistory()
815e884886fSBarry Smith @*/
8167087cfbeSBarry Smith PetscErrorCode  MatMFFDGetH(Mat mat,PetscScalar *h)
817e884886fSBarry Smith {
818e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)mat->data;
819bc0f08ceSBarry Smith   PetscErrorCode ierr;
820bc0f08ceSBarry Smith   PetscBool      match;
821e884886fSBarry Smith 
822e884886fSBarry Smith   PetscFunctionBegin;
82388b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
82488b4c220SStefano Zampini   PetscValidPointer(h,2);
825251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)mat,MATMFFD,&match);CHKERRQ(ierr);
826ce94432eSBarry Smith   if (!match) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ARG_WRONG,"Not a MFFD matrix");
827bc0f08ceSBarry Smith 
828e884886fSBarry Smith   *h = ctx->currenth;
829e884886fSBarry Smith   PetscFunctionReturn(0);
830e884886fSBarry Smith }
831e884886fSBarry Smith 
832e884886fSBarry Smith /*@C
833e884886fSBarry Smith    MatMFFDSetFunction - Sets the function used in applying the matrix free.
834e884886fSBarry Smith 
8353f9fe445SBarry Smith    Logically Collective on Mat
836e884886fSBarry Smith 
837e884886fSBarry Smith    Input Parameters:
83814f633e2SBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF() or MatCreateMFFD()
839e884886fSBarry Smith .  func - the function to use
840e884886fSBarry Smith -  funcctx - optional function context passed to function
841e884886fSBarry Smith 
84214f633e2SBarry Smith    Calling Sequence of func:
84314f633e2SBarry Smith $     func (void *funcctx, Vec x, Vec f)
84414f633e2SBarry Smith 
84514f633e2SBarry Smith +  funcctx - user provided context
84614f633e2SBarry Smith .  x - input vector
84714f633e2SBarry Smith -  f - computed output function
84814f633e2SBarry Smith 
849e884886fSBarry Smith    Level: advanced
850e884886fSBarry Smith 
851e884886fSBarry Smith    Notes:
852e884886fSBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
853e884886fSBarry Smith     matrix inside your compute Jacobian routine
854e884886fSBarry Smith 
8553ec795f1SBarry Smith     If this is not set then it will use the function set with SNESSetFunction() if MatCreateSNESMF() was used.
856e884886fSBarry Smith 
857e884886fSBarry Smith .keywords: SNES, matrix-free, function
858e884886fSBarry Smith 
8591d0fab5eSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatCreateMFFD(), MATMFFD,
8601d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory(), SNESetFunction()
861e884886fSBarry Smith @*/
8627087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunction(Mat mat,PetscErrorCode (*func)(void*,Vec,Vec),void *funcctx)
863e884886fSBarry Smith {
864bc0f08ceSBarry Smith   PetscErrorCode ierr;
865e884886fSBarry Smith 
866e884886fSBarry Smith   PetscFunctionBegin;
86788b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
868bc0f08ceSBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunction_C",(Mat,PetscErrorCode (*)(void*,Vec,Vec),void*),(mat,func,funcctx));CHKERRQ(ierr);
869e884886fSBarry Smith   PetscFunctionReturn(0);
870e884886fSBarry Smith }
871e884886fSBarry Smith 
872e884886fSBarry Smith /*@C
873e884886fSBarry Smith    MatMFFDSetFunctioni - Sets the function for a single component
874e884886fSBarry Smith 
8753f9fe445SBarry Smith    Logically Collective on Mat
876e884886fSBarry Smith 
877e884886fSBarry Smith    Input Parameters:
878e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
879e884886fSBarry Smith -  funci - the function to use
880e884886fSBarry Smith 
881e884886fSBarry Smith    Level: advanced
882e884886fSBarry Smith 
883e884886fSBarry Smith    Notes:
884e884886fSBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
885e884886fSBarry Smith     matrix inside your compute Jacobian routine
886e884886fSBarry Smith 
887e884886fSBarry Smith 
888e884886fSBarry Smith .keywords: SNES, matrix-free, function
889e884886fSBarry Smith 
8901d0fab5eSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatMFFDSetHHistory(), MatMFFDResetHHistory(), SNESetFunction()
8911d0fab5eSBarry Smith 
892e884886fSBarry Smith @*/
8937087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunctioni(Mat mat,PetscErrorCode (*funci)(void*,PetscInt,Vec,PetscScalar*))
894e884886fSBarry Smith {
8954ac538c5SBarry Smith   PetscErrorCode ierr;
896e884886fSBarry Smith 
897e884886fSBarry Smith   PetscFunctionBegin;
8980700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
8994ac538c5SBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunctioni_C",(Mat,PetscErrorCode (*)(void*,PetscInt,Vec,PetscScalar*)),(mat,funci));CHKERRQ(ierr);
900e884886fSBarry Smith   PetscFunctionReturn(0);
901e884886fSBarry Smith }
902e884886fSBarry Smith 
903e884886fSBarry Smith /*@C
904e884886fSBarry Smith    MatMFFDSetFunctioniBase - Sets the base vector for a single component function evaluation
905e884886fSBarry Smith 
9063f9fe445SBarry Smith    Logically Collective on Mat
907e884886fSBarry Smith 
908e884886fSBarry Smith    Input Parameters:
909e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
910e884886fSBarry Smith -  func - the function to use
911e884886fSBarry Smith 
912e884886fSBarry Smith    Level: advanced
913e884886fSBarry Smith 
914e884886fSBarry Smith    Notes:
915e884886fSBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
916e884886fSBarry Smith     matrix inside your compute Jacobian routine
917e884886fSBarry Smith 
918e884886fSBarry Smith 
919e884886fSBarry Smith .keywords: SNES, matrix-free, function
920e884886fSBarry Smith 
921e884886fSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatCreateMFFD(), MATMFFD
9221d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory(), SNESetFunction()
923e884886fSBarry Smith @*/
9247087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunctioniBase(Mat mat,PetscErrorCode (*func)(void*,Vec))
925e884886fSBarry Smith {
9264ac538c5SBarry Smith   PetscErrorCode ierr;
927e884886fSBarry Smith 
928e884886fSBarry Smith   PetscFunctionBegin;
9290700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
9304ac538c5SBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunctioniBase_C",(Mat,PetscErrorCode (*)(void*,Vec)),(mat,func));CHKERRQ(ierr);
931e884886fSBarry Smith   PetscFunctionReturn(0);
932e884886fSBarry Smith }
933e884886fSBarry Smith 
934e884886fSBarry Smith /*@
935e884886fSBarry Smith    MatMFFDSetPeriod - Sets how often h is recomputed, by default it is everytime
936e884886fSBarry Smith 
9373f9fe445SBarry Smith    Logically Collective on Mat
938e884886fSBarry Smith 
939e884886fSBarry Smith    Input Parameters:
940e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
941e884886fSBarry Smith -  period - 1 for everytime, 2 for every second etc
942e884886fSBarry Smith 
943e884886fSBarry Smith    Options Database Keys:
944e884886fSBarry Smith +  -mat_mffd_period <period>
945e884886fSBarry Smith 
946e884886fSBarry Smith    Level: advanced
947e884886fSBarry Smith 
948e884886fSBarry Smith 
949e884886fSBarry Smith .keywords: SNES, matrix-free, parameters
950e884886fSBarry Smith 
951e884886fSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(),
9521d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory()
953e884886fSBarry Smith @*/
9547087cfbeSBarry Smith PetscErrorCode  MatMFFDSetPeriod(Mat mat,PetscInt period)
955e884886fSBarry Smith {
956bc0f08ceSBarry Smith   PetscErrorCode ierr;
957e884886fSBarry Smith 
958e884886fSBarry Smith   PetscFunctionBegin;
95988b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
96088b4c220SStefano Zampini   PetscValidLogicalCollectiveInt(mat,period,2);
961bc0f08ceSBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetPeriod_C",(Mat,PetscInt),(mat,period));CHKERRQ(ierr);
962e884886fSBarry Smith   PetscFunctionReturn(0);
963e884886fSBarry Smith }
964e884886fSBarry Smith 
965e884886fSBarry Smith /*@
966e884886fSBarry Smith    MatMFFDSetFunctionError - Sets the error_rel for the approximation of
967e884886fSBarry Smith    matrix-vector products using finite differences.
968e884886fSBarry Smith 
9693f9fe445SBarry Smith    Logically Collective on Mat
970e884886fSBarry Smith 
971e884886fSBarry Smith    Input Parameters:
972e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateMFFD() or MatCreateSNESMF()
973e884886fSBarry Smith -  error_rel - relative error (should be set to the square root of
974e884886fSBarry Smith                the relative error in the function evaluations)
975e884886fSBarry Smith 
976e884886fSBarry Smith    Options Database Keys:
977e884886fSBarry Smith +  -mat_mffd_err <error_rel> - Sets error_rel
978e884886fSBarry Smith 
979e884886fSBarry Smith    Level: advanced
980e884886fSBarry Smith 
981e884886fSBarry Smith    Notes:
982e884886fSBarry Smith    The default matrix-free matrix-vector product routine computes
983e884886fSBarry Smith .vb
984e884886fSBarry Smith      F'(u)*a = [F(u+h*a) - F(u)]/h where
985e884886fSBarry Smith      h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
986e884886fSBarry Smith        = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   else
987e884886fSBarry Smith .ve
988e884886fSBarry Smith 
989e884886fSBarry Smith .keywords: SNES, matrix-free, parameters
990e884886fSBarry Smith 
991e884886fSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatCreateMFFD(), MATMFFD
9921d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory()
993e884886fSBarry Smith @*/
9947087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunctionError(Mat mat,PetscReal error)
995e884886fSBarry Smith {
996bc0f08ceSBarry Smith   PetscErrorCode ierr;
997e884886fSBarry Smith 
998e884886fSBarry Smith   PetscFunctionBegin;
99988b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
100088b4c220SStefano Zampini   PetscValidLogicalCollectiveReal(mat,error,2);
1001bc0f08ceSBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunctionError_C",(Mat,PetscReal),(mat,error));CHKERRQ(ierr);
1002e884886fSBarry Smith   PetscFunctionReturn(0);
1003e884886fSBarry Smith }
1004e884886fSBarry Smith 
1005e884886fSBarry Smith /*@
1006e884886fSBarry Smith    MatMFFDSetHHistory - Sets an array to collect a history of the
1007e884886fSBarry Smith    differencing values (h) computed for the matrix-free product.
1008e884886fSBarry Smith 
10093f9fe445SBarry Smith    Logically Collective on Mat
1010e884886fSBarry Smith 
1011e884886fSBarry Smith    Input Parameters:
1012e884886fSBarry Smith +  J - the matrix-free matrix context
1013e884886fSBarry Smith .  histroy - space to hold the history
1014e884886fSBarry Smith -  nhistory - number of entries in history, if more entries are generated than
1015e884886fSBarry Smith               nhistory, then the later ones are discarded
1016e884886fSBarry Smith 
1017e884886fSBarry Smith    Level: advanced
1018e884886fSBarry Smith 
1019e884886fSBarry Smith    Notes:
1020e884886fSBarry Smith    Use MatMFFDResetHHistory() to reset the history counter and collect
1021e884886fSBarry Smith    a new batch of differencing parameters, h.
1022e884886fSBarry Smith 
1023e884886fSBarry Smith .keywords: SNES, matrix-free, h history, differencing history
1024e884886fSBarry Smith 
1025e884886fSBarry Smith .seealso: MatMFFDGetH(), MatCreateSNESMF(),
10261d0fab5eSBarry Smith           MatMFFDResetHHistory(), MatMFFDSetFunctionError()
1027e884886fSBarry Smith 
1028e884886fSBarry Smith @*/
10297087cfbeSBarry Smith PetscErrorCode  MatMFFDSetHHistory(Mat J,PetscScalar history[],PetscInt nhistory)
1030e884886fSBarry Smith {
1031e884886fSBarry Smith   MatMFFD        ctx = (MatMFFD)J->data;
1032bc0f08ceSBarry Smith   PetscErrorCode ierr;
1033bc0f08ceSBarry Smith   PetscBool      match;
1034e884886fSBarry Smith 
1035e884886fSBarry Smith   PetscFunctionBegin;
103688b4c220SStefano Zampini   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
103788b4c220SStefano Zampini   if (history) PetscValidPointer(history,2);
103888b4c220SStefano Zampini   PetscValidLogicalCollectiveInt(J,nhistory,3);
1039251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)J,MATMFFD,&match);CHKERRQ(ierr);
1040ce94432eSBarry Smith   if (!match) SETERRQ(PetscObjectComm((PetscObject)J),PETSC_ERR_ARG_WRONG,"Not a MFFD matrix");
1041e884886fSBarry Smith   ctx->historyh    = history;
1042e884886fSBarry Smith   ctx->maxcurrenth = nhistory;
104375567043SBarry Smith   ctx->currenth    = 0.;
1044e884886fSBarry Smith   PetscFunctionReturn(0);
1045e884886fSBarry Smith }
1046e884886fSBarry Smith 
1047e884886fSBarry Smith /*@
1048e884886fSBarry Smith    MatMFFDResetHHistory - Resets the counter to zero to begin
1049e884886fSBarry Smith    collecting a new set of differencing histories.
1050e884886fSBarry Smith 
10513f9fe445SBarry Smith    Logically Collective on Mat
1052e884886fSBarry Smith 
1053e884886fSBarry Smith    Input Parameters:
1054e884886fSBarry Smith .  J - the matrix-free matrix context
1055e884886fSBarry Smith 
1056e884886fSBarry Smith    Level: advanced
1057e884886fSBarry Smith 
1058e884886fSBarry Smith    Notes:
1059e884886fSBarry Smith    Use MatMFFDSetHHistory() to create the original history counter.
1060e884886fSBarry Smith 
1061e884886fSBarry Smith .keywords: SNES, matrix-free, h history, differencing history
1062e884886fSBarry Smith 
1063e884886fSBarry Smith .seealso: MatMFFDGetH(), MatCreateSNESMF(),
10641d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDSetFunctionError()
1065e884886fSBarry Smith 
1066e884886fSBarry Smith @*/
10677087cfbeSBarry Smith PetscErrorCode  MatMFFDResetHHistory(Mat J)
1068e884886fSBarry Smith {
1069bc0f08ceSBarry Smith   PetscErrorCode ierr;
1070e884886fSBarry Smith 
1071e884886fSBarry Smith   PetscFunctionBegin;
107288b4c220SStefano Zampini   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
1073bc0f08ceSBarry Smith   ierr = PetscTryMethod(J,"MatMFFDResetHHistory_C",(Mat),(J));CHKERRQ(ierr);
1074e884886fSBarry Smith   PetscFunctionReturn(0);
1075e884886fSBarry Smith }
1076e884886fSBarry Smith 
1077e884886fSBarry Smith /*@
1078e884886fSBarry Smith     MatMFFDSetBase - Sets the vector U at which matrix vector products of the
1079e884886fSBarry Smith         Jacobian are computed
1080e884886fSBarry Smith 
10813f9fe445SBarry Smith     Logically Collective on Mat
1082e884886fSBarry Smith 
1083e884886fSBarry Smith     Input Parameters:
1084e884886fSBarry Smith +   J - the MatMFFD matrix
10853ec795f1SBarry Smith .   U - the vector
1086bcddec3dSBarry Smith -   F - (optional) vector that contains F(u) if it has been already computed
1087e884886fSBarry Smith 
1088e884886fSBarry Smith     Notes: This is rarely used directly
1089e884886fSBarry Smith 
10908af5ae88SBarry Smith     If F is provided then it is not recomputed. Otherwise the function is evaluated at the base
10918af5ae88SBarry Smith     point during the first MatMult() after each call to MatMFFDSetBase().
1092dff2f722SBarry Smith 
1093e884886fSBarry Smith     Level: advanced
1094e884886fSBarry Smith 
1095e884886fSBarry Smith @*/
10967087cfbeSBarry Smith PetscErrorCode  MatMFFDSetBase(Mat J,Vec U,Vec F)
1097e884886fSBarry Smith {
10984ac538c5SBarry Smith   PetscErrorCode ierr;
1099e884886fSBarry Smith 
1100e884886fSBarry Smith   PetscFunctionBegin;
11010700a824SBarry Smith   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
11020700a824SBarry Smith   PetscValidHeaderSpecific(U,VEC_CLASSID,2);
11030700a824SBarry Smith   if (F) PetscValidHeaderSpecific(F,VEC_CLASSID,3);
11044ac538c5SBarry Smith   ierr = PetscTryMethod(J,"MatMFFDSetBase_C",(Mat,Vec,Vec),(J,U,F));CHKERRQ(ierr);
1105e884886fSBarry Smith   PetscFunctionReturn(0);
1106e884886fSBarry Smith }
1107e884886fSBarry Smith 
1108e884886fSBarry Smith /*@C
1109e884886fSBarry Smith     MatMFFDSetCheckh - Sets a function that checks the computed h and adjusts
1110e884886fSBarry Smith         it to satisfy some criteria
1111e884886fSBarry Smith 
11123f9fe445SBarry Smith     Logically Collective on Mat
1113e884886fSBarry Smith 
1114e884886fSBarry Smith     Input Parameters:
1115e884886fSBarry Smith +   J - the MatMFFD matrix
1116e884886fSBarry Smith .   fun - the function that checks h
1117e884886fSBarry Smith -   ctx - any context needed by the function
1118e884886fSBarry Smith 
1119e884886fSBarry Smith     Options Database Keys:
1120e884886fSBarry Smith .   -mat_mffd_check_positivity
1121e884886fSBarry Smith 
1122e884886fSBarry Smith     Level: advanced
1123e884886fSBarry Smith 
1124755b7f64SBarry Smith     Notes: For example, MatMFFDCheckPositivity() insures that all entries
1125e884886fSBarry Smith        of U + h*a are non-negative
1126e884886fSBarry Smith 
1127755b7f64SBarry Smith      The function you provide is called after the default h has been computed and allows you to
1128755b7f64SBarry Smith      modify it.
1129755b7f64SBarry Smith 
1130755b7f64SBarry Smith .seealso:  MatMFFDCheckPositivity()
1131e884886fSBarry Smith @*/
11327087cfbeSBarry Smith PetscErrorCode  MatMFFDSetCheckh(Mat J,PetscErrorCode (*fun)(void*,Vec,Vec,PetscScalar*),void *ctx)
1133e884886fSBarry Smith {
11344ac538c5SBarry Smith   PetscErrorCode ierr;
1135e884886fSBarry Smith 
1136e884886fSBarry Smith   PetscFunctionBegin;
11370700a824SBarry Smith   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
11384ac538c5SBarry Smith   ierr = PetscTryMethod(J,"MatMFFDSetCheckh_C",(Mat,PetscErrorCode (*)(void*,Vec,Vec,PetscScalar*),void*),(J,fun,ctx));CHKERRQ(ierr);
1139e884886fSBarry Smith   PetscFunctionReturn(0);
1140e884886fSBarry Smith }
1141e884886fSBarry Smith 
1142e884886fSBarry Smith /*@
1143e884886fSBarry Smith     MatMFFDCheckPositivity - Checks that all entries in U + h*a are positive or
1144e884886fSBarry Smith         zero, decreases h until this is satisfied.
1145e884886fSBarry Smith 
11463f9fe445SBarry Smith     Logically Collective on Vec
1147e884886fSBarry Smith 
1148e884886fSBarry Smith     Input Parameters:
1149e884886fSBarry Smith +   U - base vector that is added to
1150e884886fSBarry Smith .   a - vector that is added
1151e884886fSBarry Smith .   h - scaling factor on a
1152e884886fSBarry Smith -   dummy - context variable (unused)
1153e884886fSBarry Smith 
1154e884886fSBarry Smith     Options Database Keys:
1155e884886fSBarry Smith .   -mat_mffd_check_positivity
1156e884886fSBarry Smith 
1157e884886fSBarry Smith     Level: advanced
1158e884886fSBarry Smith 
1159e884886fSBarry Smith     Notes: This is rarely used directly, rather it is passed as an argument to
1160e884886fSBarry Smith            MatMFFDSetCheckh()
1161e884886fSBarry Smith 
1162e884886fSBarry Smith .seealso:  MatMFFDSetCheckh()
1163e884886fSBarry Smith @*/
11647087cfbeSBarry Smith PetscErrorCode  MatMFFDCheckPositivity(void *dummy,Vec U,Vec a,PetscScalar *h)
1165e884886fSBarry Smith {
1166e884886fSBarry Smith   PetscReal      val, minval;
1167e884886fSBarry Smith   PetscScalar    *u_vec, *a_vec;
1168e884886fSBarry Smith   PetscErrorCode ierr;
1169e884886fSBarry Smith   PetscInt       i,n;
1170e884886fSBarry Smith   MPI_Comm       comm;
1171e884886fSBarry Smith 
1172e884886fSBarry Smith   PetscFunctionBegin;
117388b4c220SStefano Zampini   PetscValidHeaderSpecific(U,VEC_CLASSID,2);
117488b4c220SStefano Zampini   PetscValidHeaderSpecific(a,VEC_CLASSID,3);
117588b4c220SStefano Zampini   PetscValidPointer(h,4);
1176e884886fSBarry Smith   ierr   = PetscObjectGetComm((PetscObject)U,&comm);CHKERRQ(ierr);
1177e884886fSBarry Smith   ierr   = VecGetArray(U,&u_vec);CHKERRQ(ierr);
1178e884886fSBarry Smith   ierr   = VecGetArray(a,&a_vec);CHKERRQ(ierr);
1179e884886fSBarry Smith   ierr   = VecGetLocalSize(U,&n);CHKERRQ(ierr);
1180e884886fSBarry Smith   minval = PetscAbsScalar(*h*1.01);
1181e884886fSBarry Smith   for (i=0; i<n; i++) {
1182e884886fSBarry Smith     if (PetscRealPart(u_vec[i] + *h*a_vec[i]) <= 0.0) {
1183e884886fSBarry Smith       val = PetscAbsScalar(u_vec[i]/a_vec[i]);
1184e884886fSBarry Smith       if (val < minval) minval = val;
1185e884886fSBarry Smith     }
1186e884886fSBarry Smith   }
1187e884886fSBarry Smith   ierr = VecRestoreArray(U,&u_vec);CHKERRQ(ierr);
1188e884886fSBarry Smith   ierr = VecRestoreArray(a,&a_vec);CHKERRQ(ierr);
1189b2566f29SBarry Smith   ierr = MPIU_Allreduce(&minval,&val,1,MPIU_REAL,MPIU_MIN,comm);CHKERRQ(ierr);
1190e884886fSBarry Smith   if (val <= PetscAbsScalar(*h)) {
11916712e2f1SBarry Smith     ierr = PetscInfo2(U,"Scaling back h from %g to %g\n",(double)PetscRealPart(*h),(double)(.99*val));CHKERRQ(ierr);
1192e884886fSBarry Smith     if (PetscRealPart(*h) > 0.0) *h =  0.99*val;
1193e884886fSBarry Smith     else                         *h = -0.99*val;
1194e884886fSBarry Smith   }
1195e884886fSBarry Smith   PetscFunctionReturn(0);
1196e884886fSBarry Smith }
1197