xref: /petsc/src/mat/impls/mffd/mffd.c (revision d8d19677bbccf95218448bee62e6b87f4513e133)
1e884886fSBarry Smith 
2af0996ceSBarry Smith #include <petsc/private/matimpl.h>
3c6db04a5SJed Brown #include <../src/mat/impls/mffd/mffdimpl.h>   /*I  "petscmat.h"   I*/
4e884886fSBarry Smith 
5f4259b30SLisandro Dalcin PetscFunctionList MatMFFDList              = NULL;
6ace3abfcSBarry Smith PetscBool         MatMFFDRegisterAllCalled = PETSC_FALSE;
7e884886fSBarry Smith 
87087cfbeSBarry Smith PetscClassId  MATMFFD_CLASSID;
9166c7f25SBarry Smith PetscLogEvent MATMFFD_Mult;
10e884886fSBarry Smith 
11ace3abfcSBarry Smith static PetscBool MatMFFDPackageInitialized = PETSC_FALSE;
12b022a5c1SBarry Smith /*@C
132390153bSJed Brown   MatMFFDFinalizePackage - This function destroys everything in the MatMFFD package. It is
14b022a5c1SBarry Smith   called from PetscFinalize().
15b022a5c1SBarry Smith 
16b022a5c1SBarry Smith   Level: developer
17b022a5c1SBarry Smith 
18755b7f64SBarry Smith .seealso: PetscFinalize(), MatCreateMFFD(), MatCreateSNESMF()
19b022a5c1SBarry Smith @*/
207087cfbeSBarry Smith PetscErrorCode  MatMFFDFinalizePackage(void)
21b022a5c1SBarry Smith {
22a703d84cSPatrick Lacasse   PetscErrorCode ierr;
23a703d84cSPatrick Lacasse 
24b022a5c1SBarry Smith   PetscFunctionBegin;
2537e93019SBarry Smith   ierr = PetscFunctionListDestroy(&MatMFFDList);CHKERRQ(ierr);
26b022a5c1SBarry Smith   MatMFFDPackageInitialized = PETSC_FALSE;
27b022a5c1SBarry Smith   MatMFFDRegisterAllCalled  = PETSC_FALSE;
28b022a5c1SBarry Smith   PetscFunctionReturn(0);
29b022a5c1SBarry Smith }
30b022a5c1SBarry Smith 
313ec795f1SBarry Smith /*@C
323ec795f1SBarry Smith   MatMFFDInitializePackage - This function initializes everything in the MatMFFD package. It is called
338a690491SBarry Smith   from MatInitializePackage().
343ec795f1SBarry Smith 
353ec795f1SBarry Smith   Level: developer
363ec795f1SBarry Smith 
373ec795f1SBarry Smith .seealso: PetscInitialize()
383ec795f1SBarry Smith @*/
39607a6623SBarry Smith PetscErrorCode  MatMFFDInitializePackage(void)
403ec795f1SBarry Smith {
413ec795f1SBarry Smith   char           logList[256];
428e81d068SLisandro Dalcin   PetscBool      opt,pkg;
433ec795f1SBarry Smith   PetscErrorCode ierr;
443ec795f1SBarry Smith 
453ec795f1SBarry Smith   PetscFunctionBegin;
46b022a5c1SBarry Smith   if (MatMFFDPackageInitialized) PetscFunctionReturn(0);
47b022a5c1SBarry Smith   MatMFFDPackageInitialized = PETSC_TRUE;
483ec795f1SBarry Smith   /* Register Classes */
490700a824SBarry Smith   ierr = PetscClassIdRegister("MatMFFD",&MATMFFD_CLASSID);CHKERRQ(ierr);
503ec795f1SBarry Smith   /* Register Constructors */
51607a6623SBarry Smith   ierr = MatMFFDRegisterAll();CHKERRQ(ierr);
523ec795f1SBarry Smith   /* Register Events */
530700a824SBarry Smith   ierr = PetscLogEventRegister("MatMult MF",MATMFFD_CLASSID,&MATMFFD_Mult);CHKERRQ(ierr);
54e94e781bSJacob Faibussowitsch  /* Process Info */
55e94e781bSJacob Faibussowitsch   {
56e94e781bSJacob Faibussowitsch     PetscClassId  classids[1];
57e94e781bSJacob Faibussowitsch 
58e94e781bSJacob Faibussowitsch     classids[0] = MATMFFD_CLASSID;
59e94e781bSJacob Faibussowitsch     ierr = PetscInfoProcessClass("matmffd", 1, classids);CHKERRQ(ierr);
603ec795f1SBarry Smith   }
613ec795f1SBarry Smith   /* Process summary exclusions */
628e81d068SLisandro Dalcin   ierr = PetscOptionsGetString(NULL,NULL,"-log_exclude",logList,sizeof(logList),&opt);CHKERRQ(ierr);
633ec795f1SBarry Smith   if (opt) {
648e81d068SLisandro Dalcin     ierr = PetscStrInList("matmffd",logList,',',&pkg);CHKERRQ(ierr);
65fa2bb9feSLisandro Dalcin     if (pkg) {ierr = PetscLogEventExcludeClass(MATMFFD_CLASSID);CHKERRQ(ierr);}
663ec795f1SBarry Smith   }
678e81d068SLisandro Dalcin   /* Register package finalizer */
68b022a5c1SBarry Smith   ierr = PetscRegisterFinalize(MatMFFDFinalizePackage);CHKERRQ(ierr);
693ec795f1SBarry Smith   PetscFunctionReturn(0);
703ec795f1SBarry Smith }
713ec795f1SBarry Smith 
72789d8953SBarry Smith static PetscErrorCode  MatMFFDSetType_MFFD(Mat mat,MatMFFDType ftype)
73789d8953SBarry Smith {
74789d8953SBarry Smith   PetscErrorCode ierr,(*r)(MatMFFD);
75789d8953SBarry Smith   MatMFFD        ctx;
76789d8953SBarry Smith   PetscBool      match;
77789d8953SBarry Smith 
78789d8953SBarry Smith   PetscFunctionBegin;
79789d8953SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
80789d8953SBarry Smith   PetscValidCharPointer(ftype,2);
81789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
82789d8953SBarry Smith 
83789d8953SBarry Smith   /* already set, so just return */
84789d8953SBarry Smith   ierr = PetscObjectTypeCompare((PetscObject)ctx,ftype,&match);CHKERRQ(ierr);
85789d8953SBarry Smith   if (match) PetscFunctionReturn(0);
86789d8953SBarry Smith 
87789d8953SBarry Smith   /* destroy the old one if it exists */
88789d8953SBarry Smith   if (ctx->ops->destroy) {
89789d8953SBarry Smith     ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr);
90789d8953SBarry Smith   }
91789d8953SBarry Smith 
92789d8953SBarry Smith   ierr =  PetscFunctionListFind(MatMFFDList,ftype,&r);CHKERRQ(ierr);
93789d8953SBarry Smith   if (!r) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_UNKNOWN_TYPE,"Unknown MatMFFD type %s given",ftype);
94789d8953SBarry Smith   ierr = (*r)(ctx);CHKERRQ(ierr);
95789d8953SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)ctx,ftype);CHKERRQ(ierr);
96789d8953SBarry Smith   PetscFunctionReturn(0);
97789d8953SBarry Smith }
98789d8953SBarry Smith 
99e884886fSBarry Smith /*@C
100e884886fSBarry Smith     MatMFFDSetType - Sets the method that is used to compute the
101e884886fSBarry Smith     differencing parameter for finite differene matrix-free formulations.
102e884886fSBarry Smith 
103e884886fSBarry Smith     Input Parameters:
104e884886fSBarry Smith +   mat - the "matrix-free" matrix created via MatCreateSNESMF(), or MatCreateMFFD()
105e884886fSBarry Smith           or MatSetType(mat,MATMFFD);
106e884886fSBarry Smith -   ftype - the type requested, either MATMFFD_WP or MATMFFD_DS
107e884886fSBarry Smith 
108e884886fSBarry Smith     Level: advanced
109e884886fSBarry Smith 
110e884886fSBarry Smith     Notes:
111e884886fSBarry Smith     For example, such routines can compute h for use in
112e884886fSBarry Smith     Jacobian-vector products of the form
113e884886fSBarry Smith 
114e884886fSBarry Smith                         F(x+ha) - F(x)
115e884886fSBarry Smith           F'(u)a  ~=  ----------------
116e884886fSBarry Smith                               h
117e884886fSBarry Smith 
118755b7f64SBarry Smith .seealso: MatCreateSNESMF(), MatMFFDRegister(), MatMFFDSetFunction(), MatCreateMFFD()
119e884886fSBarry Smith @*/
12019fd82e9SBarry Smith PetscErrorCode  MatMFFDSetType(Mat mat,MatMFFDType ftype)
121e884886fSBarry Smith {
122789d8953SBarry Smith   PetscErrorCode ierr;
123e884886fSBarry Smith 
124e884886fSBarry Smith   PetscFunctionBegin;
1250700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
126e884886fSBarry Smith   PetscValidCharPointer(ftype,2);
127789d8953SBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetType_C",(Mat,MatMFFDType),(mat,ftype));CHKERRQ(ierr);
128e884886fSBarry Smith   PetscFunctionReturn(0);
129e884886fSBarry Smith }
130e884886fSBarry Smith 
1315d21e1f8SStefano Zampini static PetscErrorCode MatGetDiagonal_MFFD(Mat,Vec);
1325d21e1f8SStefano Zampini 
133e884886fSBarry Smith typedef PetscErrorCode (*FCN1)(void*,Vec); /* force argument to next function to not be extern C*/
13440244768SBarry Smith static PetscErrorCode  MatMFFDSetFunctioniBase_MFFD(Mat mat,FCN1 func)
135e884886fSBarry Smith {
136789d8953SBarry Smith   MatMFFD        ctx;
137789d8953SBarry Smith   PetscErrorCode ierr;
138e884886fSBarry Smith 
139e884886fSBarry Smith   PetscFunctionBegin;
140789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
141e884886fSBarry Smith   ctx->funcisetbase = func;
142e884886fSBarry Smith   PetscFunctionReturn(0);
143e884886fSBarry Smith }
144e884886fSBarry Smith 
145e884886fSBarry Smith typedef PetscErrorCode (*FCN2)(void*,PetscInt,Vec,PetscScalar*); /* force argument to next function to not be extern C*/
14640244768SBarry Smith static PetscErrorCode  MatMFFDSetFunctioni_MFFD(Mat mat,FCN2 funci)
147e884886fSBarry Smith {
148789d8953SBarry Smith   MatMFFD        ctx;
149789d8953SBarry Smith   PetscErrorCode ierr;
150e884886fSBarry Smith 
151e884886fSBarry Smith   PetscFunctionBegin;
152789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
153e884886fSBarry Smith   ctx->funci = funci;
154789d8953SBarry Smith   ierr = MatShellSetOperation(mat,MATOP_GET_DIAGONAL,(void (*)(void))MatGetDiagonal_MFFD);CHKERRQ(ierr);
155789d8953SBarry Smith   PetscFunctionReturn(0);
1565d21e1f8SStefano Zampini }
157789d8953SBarry Smith 
158789d8953SBarry Smith static PetscErrorCode MatMFFDGetH_MFFD(Mat mat,PetscScalar *h)
159789d8953SBarry Smith {
160789d8953SBarry Smith   MatMFFD        ctx;
161789d8953SBarry Smith   PetscErrorCode ierr;
162789d8953SBarry Smith 
163789d8953SBarry Smith   PetscFunctionBegin;
164789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
165789d8953SBarry Smith   *h = ctx->currenth;
166e884886fSBarry Smith   PetscFunctionReturn(0);
167e884886fSBarry Smith }
168e884886fSBarry Smith 
16940244768SBarry Smith static PetscErrorCode  MatMFFDResetHHistory_MFFD(Mat J)
170bc0f08ceSBarry Smith {
171789d8953SBarry Smith   MatMFFD        ctx;
172789d8953SBarry Smith   PetscErrorCode ierr;
173bc0f08ceSBarry Smith 
174bc0f08ceSBarry Smith   PetscFunctionBegin;
175789d8953SBarry Smith   ierr = MatShellGetContext(J,&ctx);CHKERRQ(ierr);
176bc0f08ceSBarry Smith   ctx->ncurrenth = 0;
177bc0f08ceSBarry Smith   PetscFunctionReturn(0);
178bc0f08ceSBarry Smith }
179e884886fSBarry Smith 
1801c84c290SBarry Smith /*@C
1811c84c290SBarry Smith    MatMFFDRegister - Adds a method to the MatMFFD registry.
1821c84c290SBarry Smith 
1831c84c290SBarry Smith    Not Collective
1841c84c290SBarry Smith 
1851c84c290SBarry Smith    Input Parameters:
1861c84c290SBarry Smith +  name_solver - name of a new user-defined compute-h module
1871c84c290SBarry Smith -  routine_create - routine to create method context
1881c84c290SBarry Smith 
1891c84c290SBarry Smith    Level: developer
1901c84c290SBarry Smith 
1911c84c290SBarry Smith    Notes:
1921c84c290SBarry Smith    MatMFFDRegister() may be called multiple times to add several user-defined solvers.
1931c84c290SBarry Smith 
1941c84c290SBarry Smith    Sample usage:
1951c84c290SBarry Smith .vb
196bdf89e91SBarry Smith    MatMFFDRegister("my_h",MyHCreate);
1971c84c290SBarry Smith .ve
1981c84c290SBarry Smith 
1991c84c290SBarry Smith    Then, your solver can be chosen with the procedural interface via
2001c84c290SBarry Smith $     MatMFFDSetType(mfctx,"my_h")
2011c84c290SBarry Smith    or at runtime via the option
202be7a6d03SBarry Smith $     -mat_mffd_type my_h
2031c84c290SBarry Smith 
2041c84c290SBarry Smith .seealso: MatMFFDRegisterAll(), MatMFFDRegisterDestroy()
2051c84c290SBarry Smith  @*/
206bdf89e91SBarry Smith PetscErrorCode  MatMFFDRegister(const char sname[],PetscErrorCode (*function)(MatMFFD))
207e884886fSBarry Smith {
208e884886fSBarry Smith   PetscErrorCode ierr;
209e884886fSBarry Smith 
210e884886fSBarry Smith   PetscFunctionBegin;
2119cc31a68SJed Brown   ierr = MatInitializePackage();CHKERRQ(ierr);
212a240a19fSJed Brown   ierr = PetscFunctionListAdd(&MatMFFDList,sname,function);CHKERRQ(ierr);
213e884886fSBarry Smith   PetscFunctionReturn(0);
214e884886fSBarry Smith }
215e884886fSBarry Smith 
216e884886fSBarry Smith /* ----------------------------------------------------------------------------------------*/
21740244768SBarry Smith static PetscErrorCode MatDestroy_MFFD(Mat mat)
218e884886fSBarry Smith {
219e884886fSBarry Smith   PetscErrorCode ierr;
220789d8953SBarry Smith   MatMFFD        ctx;
221e884886fSBarry Smith 
222e884886fSBarry Smith   PetscFunctionBegin;
223789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
2246bf464f9SBarry Smith   ierr = VecDestroy(&ctx->w);CHKERRQ(ierr);
225c51ad4d4SStefano Zampini   ierr = VecDestroy(&ctx->current_u);CHKERRQ(ierr);
226cfe22f5eSBarry Smith   if (ctx->current_f_allocated) {
2276bf464f9SBarry Smith     ierr = VecDestroy(&ctx->current_f);CHKERRQ(ierr);
228cfe22f5eSBarry Smith   }
229e884886fSBarry Smith   if (ctx->ops->destroy) {ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr);}
2306bf464f9SBarry Smith   ierr = PetscHeaderDestroy(&ctx);CHKERRQ(ierr);
231e884886fSBarry Smith 
232bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetBase_C",NULL);CHKERRQ(ierr);
233bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunctioniBase_C",NULL);CHKERRQ(ierr);
234bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunctioni_C",NULL);CHKERRQ(ierr);
235bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunction_C",NULL);CHKERRQ(ierr);
236bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetFunctionError_C",NULL);CHKERRQ(ierr);
237bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetCheckh_C",NULL);CHKERRQ(ierr);
238bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetPeriod_C",NULL);CHKERRQ(ierr);
239bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDResetHHistory_C",NULL);CHKERRQ(ierr);
240789d8953SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetHHistory_C",NULL);CHKERRQ(ierr);
241789d8953SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDSetType_C",NULL);CHKERRQ(ierr);
242789d8953SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMFFDGetH_C",NULL);CHKERRQ(ierr);
243e884886fSBarry Smith   PetscFunctionReturn(0);
244e884886fSBarry Smith }
245e884886fSBarry Smith 
246e884886fSBarry Smith /*
247e884886fSBarry Smith    MatMFFDView_MFFD - Views matrix-free parameters.
248e884886fSBarry Smith 
249e884886fSBarry Smith */
25040244768SBarry Smith static PetscErrorCode MatView_MFFD(Mat J,PetscViewer viewer)
251e884886fSBarry Smith {
252e884886fSBarry Smith   PetscErrorCode ierr;
253789d8953SBarry Smith   MatMFFD        ctx;
254a283635eSDmitry Karpeev   PetscBool      iascii, viewbase, viewfunction;
255a283635eSDmitry Karpeev   const char     *prefix;
256e884886fSBarry Smith 
257e884886fSBarry Smith   PetscFunctionBegin;
258789d8953SBarry Smith   ierr = MatShellGetContext(J,&ctx);CHKERRQ(ierr);
259251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
260e884886fSBarry Smith   if (iascii) {
261a283635eSDmitry Karpeev     ierr = PetscViewerASCIIPrintf(viewer,"Matrix-free approximation:\n");CHKERRQ(ierr);
262a283635eSDmitry Karpeev     ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr);
26357622a8eSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"err=%g (relative error in function evaluation)\n",(double)ctx->error_rel);CHKERRQ(ierr);
2647adad957SLisandro Dalcin     if (!((PetscObject)ctx)->type_name) {
265e884886fSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"The compute h routine has not yet been set\n");CHKERRQ(ierr);
266e884886fSBarry Smith     } else {
2677adad957SLisandro Dalcin       ierr = PetscViewerASCIIPrintf(viewer,"Using %s compute h routine\n",((PetscObject)ctx)->type_name);CHKERRQ(ierr);
268e884886fSBarry Smith     }
269c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
270c92e3469SBarry Smith     if (ctx->usecomplex) {
271c92e3469SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"Using Lyness complex number trick to compute the matrix-vector product\n");CHKERRQ(ierr);
272c92e3469SBarry Smith     }
273c92e3469SBarry Smith #endif
274e884886fSBarry Smith     if (ctx->ops->view) {
275e884886fSBarry Smith       ierr = (*ctx->ops->view)(ctx,viewer);CHKERRQ(ierr);
276e884886fSBarry Smith     }
277a283635eSDmitry Karpeev     ierr = PetscObjectGetOptionsPrefix((PetscObject)J, &prefix);CHKERRQ(ierr);
278a283635eSDmitry Karpeev 
279c5929fdfSBarry Smith     ierr = PetscOptionsHasName(((PetscObject)J)->options,prefix, "-mat_mffd_view_base", &viewbase);CHKERRQ(ierr);
280a283635eSDmitry Karpeev     if (viewbase) {
281a283635eSDmitry Karpeev       ierr = PetscViewerASCIIPrintf(viewer, "Base:\n");CHKERRQ(ierr);
282a283635eSDmitry Karpeev       ierr = VecView(ctx->current_u, viewer);CHKERRQ(ierr);
283a283635eSDmitry Karpeev     }
284c5929fdfSBarry Smith     ierr = PetscOptionsHasName(((PetscObject)J)->options,prefix, "-mat_mffd_view_function", &viewfunction);CHKERRQ(ierr);
285a283635eSDmitry Karpeev     if (viewfunction) {
286a283635eSDmitry Karpeev       ierr = PetscViewerASCIIPrintf(viewer, "Function:\n");CHKERRQ(ierr);
287a283635eSDmitry Karpeev       ierr = VecView(ctx->current_f, viewer);CHKERRQ(ierr);
288a283635eSDmitry Karpeev     }
289a283635eSDmitry Karpeev     ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr);
29011aeaf0aSBarry Smith   }
291e884886fSBarry Smith   PetscFunctionReturn(0);
292e884886fSBarry Smith }
293e884886fSBarry Smith 
294e884886fSBarry Smith /*
295e884886fSBarry Smith    MatAssemblyEnd_MFFD - Resets the ctx->ncurrenth to zero. This
296e884886fSBarry Smith    allows the user to indicate the beginning of a new linear solve by calling
297e884886fSBarry Smith    MatAssemblyXXX() on the matrix free matrix. This then allows the
2981d0fab5eSBarry Smith    MatCreateMFFD_WP() to properly compute ||U|| only the first time
299e884886fSBarry Smith    in the linear solver rather than every time.
3005a576424SJed Brown 
301cc2e6a90SBarry Smith    This function is referenced directly from MatAssemblyEnd_SNESMF(), which may be in a different shared library hence
302cc2e6a90SBarry Smith    it must be labeled as PETSC_EXTERN
303e884886fSBarry Smith */
3045a576424SJed Brown PETSC_EXTERN PetscErrorCode MatAssemblyEnd_MFFD(Mat J,MatAssemblyType mt)
305e884886fSBarry Smith {
306e884886fSBarry Smith   PetscErrorCode ierr;
307789d8953SBarry Smith   MatMFFD        j;
308e884886fSBarry Smith 
309e884886fSBarry Smith   PetscFunctionBegin;
310789d8953SBarry Smith   ierr = MatShellGetContext(J,&j);CHKERRQ(ierr);
311e884886fSBarry Smith   ierr = MatMFFDResetHHistory(J);CHKERRQ(ierr);
312e884886fSBarry Smith   PetscFunctionReturn(0);
313e884886fSBarry Smith }
314e884886fSBarry Smith 
315e884886fSBarry Smith /*
316e884886fSBarry Smith   MatMult_MFFD - Default matrix-free form for Jacobian-vector product, y = F'(u)*a:
317e884886fSBarry Smith 
318e884886fSBarry Smith         y ~= (F(u + ha) - F(u))/h,
319e884886fSBarry Smith   where F = nonlinear function, as set by SNESSetFunction()
320e884886fSBarry Smith         u = current iterate
321e884886fSBarry Smith         h = difference interval
322e884886fSBarry Smith */
32340244768SBarry Smith static PetscErrorCode MatMult_MFFD(Mat mat,Vec a,Vec y)
324e884886fSBarry Smith {
325789d8953SBarry Smith   MatMFFD        ctx;
326e884886fSBarry Smith   PetscScalar    h;
327e884886fSBarry Smith   Vec            w,U,F;
328e884886fSBarry Smith   PetscErrorCode ierr;
329ace3abfcSBarry Smith   PetscBool      zeroa;
330e884886fSBarry Smith 
331e884886fSBarry Smith   PetscFunctionBegin;
332789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
333ce94432eSBarry Smith   if (!ctx->current_u) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ARG_WRONGSTATE,"MatMFFDSetBase() has not been called, this is often caused by forgetting to call \n\t\tMatAssemblyBegin/End on the first Mat in the SNES compute function");
334e884886fSBarry Smith   /* We log matrix-free matrix-vector products separately, so that we can
335e884886fSBarry Smith      separate the performance monitoring from the cases that use conventional
336e884886fSBarry Smith      storage.  We may eventually modify event logging to associate events
337e884886fSBarry Smith      with particular objects, hence alleviating the more general problem. */
338e884886fSBarry Smith   ierr = PetscLogEventBegin(MATMFFD_Mult,a,y,0,0);CHKERRQ(ierr);
339e884886fSBarry Smith 
340e884886fSBarry Smith   w = ctx->w;
341e884886fSBarry Smith   U = ctx->current_u;
3423ec795f1SBarry Smith   F = ctx->current_f;
343e884886fSBarry Smith   /*
344e884886fSBarry Smith       Compute differencing parameter
345e884886fSBarry Smith   */
3464a2f8832SBarry Smith   if (!((PetscObject)ctx)->type_name) {
347e884886fSBarry Smith     ierr = MatMFFDSetType(mat,MATMFFD_WP);CHKERRQ(ierr);
3489c6ac3b3SBarry Smith     ierr = MatSetFromOptions(mat);CHKERRQ(ierr);
349e884886fSBarry Smith   }
350e884886fSBarry Smith   ierr = (*ctx->ops->compute)(ctx,U,a,&h,&zeroa);CHKERRQ(ierr);
351e884886fSBarry Smith   if (zeroa) {
352e884886fSBarry Smith     ierr = VecSet(y,0.0);CHKERRQ(ierr);
353e884886fSBarry Smith     PetscFunctionReturn(0);
354e884886fSBarry Smith   }
355e884886fSBarry Smith 
35684d44b13SHong Zhang   if (mat->erroriffailure && PetscIsInfOrNanScalar(h)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Computed Nan differencing parameter h");
357e884886fSBarry Smith   if (ctx->checkh) {
358e884886fSBarry Smith     ierr = (*ctx->checkh)(ctx->checkhctx,U,a,&h);CHKERRQ(ierr);
359e884886fSBarry Smith   }
360e884886fSBarry Smith 
361e884886fSBarry Smith   /* keep a record of the current differencing parameter h */
362e884886fSBarry Smith   ctx->currenth = h;
363e884886fSBarry Smith #if defined(PETSC_USE_COMPLEX)
36457622a8eSBarry Smith   ierr = PetscInfo2(mat,"Current differencing parameter: %g + %g i\n",(double)PetscRealPart(h),(double)PetscImaginaryPart(h));CHKERRQ(ierr);
365e884886fSBarry Smith #else
366e884886fSBarry Smith   ierr = PetscInfo1(mat,"Current differencing parameter: %15.12e\n",h);CHKERRQ(ierr);
367e884886fSBarry Smith #endif
368e884886fSBarry Smith   if (ctx->historyh && ctx->ncurrenth < ctx->maxcurrenth) {
369e884886fSBarry Smith     ctx->historyh[ctx->ncurrenth] = h;
370e884886fSBarry Smith   }
371e884886fSBarry Smith   ctx->ncurrenth++;
372e884886fSBarry Smith 
373c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
374c92e3469SBarry Smith   if (ctx->usecomplex) h = PETSC_i*h;
375c92e3469SBarry Smith #endif
376c92e3469SBarry Smith 
377e884886fSBarry Smith   /* w = u + ha */
378e884886fSBarry Smith   ierr = VecWAXPY(w,h,a,U);CHKERRQ(ierr);
379e884886fSBarry Smith 
3801b797266SDmitry Karpeev   /* compute func(U) as base for differencing; only needed first time in and not when provided by user */
3811b797266SDmitry Karpeev   if (ctx->ncurrenth == 1 && ctx->current_f_allocated) {
382e884886fSBarry Smith     ierr = (*ctx->func)(ctx->funcctx,U,F);CHKERRQ(ierr);
38352121784SBarry Smith   }
384e884886fSBarry Smith   ierr = (*ctx->func)(ctx->funcctx,w,y);CHKERRQ(ierr);
385e884886fSBarry Smith 
386c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
387c92e3469SBarry Smith   if (ctx->usecomplex) {
388c92e3469SBarry Smith     ierr = VecImaginaryPart(y);CHKERRQ(ierr);
389c92e3469SBarry Smith     h    = PetscImaginaryPart(h);
390c92e3469SBarry Smith   } else {
391e884886fSBarry Smith     ierr = VecAXPY(y,-1.0,F);CHKERRQ(ierr);
392c92e3469SBarry Smith   }
393c92e3469SBarry Smith #else
394c92e3469SBarry Smith   ierr = VecAXPY(y,-1.0,F);CHKERRQ(ierr);
395c92e3469SBarry Smith #endif
396e884886fSBarry Smith   ierr = VecScale(y,1.0/h);CHKERRQ(ierr);
39739601f4eSBarry Smith   if (mat->nullsp) {ierr = MatNullSpaceRemove(mat->nullsp,y);CHKERRQ(ierr);}
398e884886fSBarry Smith 
399e884886fSBarry Smith   ierr = PetscLogEventEnd(MATMFFD_Mult,a,y,0,0);CHKERRQ(ierr);
400e884886fSBarry Smith   PetscFunctionReturn(0);
401e884886fSBarry Smith }
402e884886fSBarry Smith 
403e884886fSBarry Smith /*
404e884886fSBarry Smith   MatGetDiagonal_MFFD - Gets the diagonal for a matrix free matrix
405e884886fSBarry Smith 
406e884886fSBarry Smith         y ~= (F(u + ha) - F(u))/h,
407e884886fSBarry Smith   where F = nonlinear function, as set by SNESSetFunction()
408e884886fSBarry Smith         u = current iterate
409e884886fSBarry Smith         h = difference interval
410e884886fSBarry Smith */
4115d21e1f8SStefano Zampini PetscErrorCode MatGetDiagonal_MFFD(Mat mat,Vec a)
412e884886fSBarry Smith {
413789d8953SBarry Smith   MatMFFD        ctx;
414e884886fSBarry Smith   PetscScalar    h,*aa,*ww,v;
415e884886fSBarry Smith   PetscReal      epsilon = PETSC_SQRT_MACHINE_EPSILON,umin = 100.0*PETSC_SQRT_MACHINE_EPSILON;
416e884886fSBarry Smith   Vec            w,U;
417e884886fSBarry Smith   PetscErrorCode ierr;
418e884886fSBarry Smith   PetscInt       i,rstart,rend;
419e884886fSBarry Smith 
420e884886fSBarry Smith   PetscFunctionBegin;
421789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
422486afcceSStefano Zampini   if (!ctx->func) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Requires calling MatMFFDSetFunction() first");
423486afcceSStefano Zampini   if (!ctx->funci) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Requires calling MatMFFDSetFunctioni() first");
424e884886fSBarry Smith   w    = ctx->w;
425e884886fSBarry Smith   U    = ctx->current_u;
426e884886fSBarry Smith   ierr = (*ctx->func)(ctx->funcctx,U,a);CHKERRQ(ierr);
427789d8953SBarry Smith   if (ctx->funcisetbase) {
428e884886fSBarry Smith     ierr = (*ctx->funcisetbase)(ctx->funcctx,U);CHKERRQ(ierr);
429789d8953SBarry Smith   }
430e884886fSBarry Smith   ierr = VecCopy(U,w);CHKERRQ(ierr);
431e884886fSBarry Smith 
432e884886fSBarry Smith   ierr = VecGetOwnershipRange(a,&rstart,&rend);CHKERRQ(ierr);
433e884886fSBarry Smith   ierr = VecGetArray(a,&aa);CHKERRQ(ierr);
434e884886fSBarry Smith   for (i=rstart; i<rend; i++) {
435e884886fSBarry Smith     ierr = VecGetArray(w,&ww);CHKERRQ(ierr);
436e884886fSBarry Smith     h    = ww[i-rstart];
437e884886fSBarry Smith     if (h == 0.0) h = 1.0;
438e884886fSBarry Smith     if (PetscAbsScalar(h) < umin && PetscRealPart(h) >= 0.0)     h = umin;
439e884886fSBarry Smith     else if (PetscRealPart(h) < 0.0 && PetscAbsScalar(h) < umin) h = -umin;
440e884886fSBarry Smith     h *= epsilon;
441e884886fSBarry Smith 
442e884886fSBarry Smith     ww[i-rstart] += h;
443e884886fSBarry Smith     ierr          = VecRestoreArray(w,&ww);CHKERRQ(ierr);
444e884886fSBarry Smith     ierr          = (*ctx->funci)(ctx->funcctx,i,w,&v);CHKERRQ(ierr);
445e884886fSBarry Smith     aa[i-rstart]  = (v - aa[i-rstart])/h;
446e884886fSBarry Smith 
447e884886fSBarry Smith     ierr          = VecGetArray(w,&ww);CHKERRQ(ierr);
448e884886fSBarry Smith     ww[i-rstart] -= h;
449e884886fSBarry Smith     ierr          = VecRestoreArray(w,&ww);CHKERRQ(ierr);
450e884886fSBarry Smith   }
451e884886fSBarry Smith   ierr = VecRestoreArray(a,&aa);CHKERRQ(ierr);
452e884886fSBarry Smith   PetscFunctionReturn(0);
453e884886fSBarry Smith }
454e884886fSBarry Smith 
455d8fa6a54SBarry Smith PETSC_EXTERN PetscErrorCode MatMFFDSetBase_MFFD(Mat J,Vec U,Vec F)
456e884886fSBarry Smith {
457e884886fSBarry Smith   PetscErrorCode ierr;
458789d8953SBarry Smith   MatMFFD        ctx;
459e884886fSBarry Smith 
460e884886fSBarry Smith   PetscFunctionBegin;
461789d8953SBarry Smith   ierr = MatShellGetContext(J,&ctx);CHKERRQ(ierr);
462e884886fSBarry Smith   ierr = MatMFFDResetHHistory(J);CHKERRQ(ierr);
463c51ad4d4SStefano Zampini   if (!ctx->current_u) {
464c51ad4d4SStefano Zampini     ierr = VecDuplicate(U,&ctx->current_u);CHKERRQ(ierr);
4658860a134SJunchao Zhang     ierr = VecLockReadPush(ctx->current_u);CHKERRQ(ierr);
466c51ad4d4SStefano Zampini   }
4678860a134SJunchao Zhang   ierr = VecLockReadPop(ctx->current_u);CHKERRQ(ierr);
468c51ad4d4SStefano Zampini   ierr = VecCopy(U,ctx->current_u);CHKERRQ(ierr);
4698860a134SJunchao Zhang   ierr = VecLockReadPush(ctx->current_u);CHKERRQ(ierr);
47052121784SBarry Smith   if (F) {
4716bf464f9SBarry Smith     if (ctx->current_f_allocated) {ierr = VecDestroy(&ctx->current_f);CHKERRQ(ierr);}
4723ec795f1SBarry Smith     ctx->current_f           = F;
473cfe22f5eSBarry Smith     ctx->current_f_allocated = PETSC_FALSE;
474cfe22f5eSBarry Smith   } else if (!ctx->current_f_allocated) {
47506c4b6baSBarry Smith     ierr = MatCreateVecs(J,NULL,&ctx->current_f);CHKERRQ(ierr);
476cfe22f5eSBarry Smith     ctx->current_f_allocated = PETSC_TRUE;
47752121784SBarry Smith   }
478e884886fSBarry Smith   if (!ctx->w) {
479e884886fSBarry Smith     ierr = VecDuplicate(ctx->current_u,&ctx->w);CHKERRQ(ierr);
480e884886fSBarry Smith   }
481e884886fSBarry Smith   J->assembled = PETSC_TRUE;
482e884886fSBarry Smith   PetscFunctionReturn(0);
483e884886fSBarry Smith }
4845a576424SJed Brown 
485e884886fSBarry Smith typedef PetscErrorCode (*FCN3)(void*,Vec,Vec,PetscScalar*); /* force argument to next function to not be extern C*/
486b2573a8aSBarry Smith 
48740244768SBarry Smith static PetscErrorCode  MatMFFDSetCheckh_MFFD(Mat J,FCN3 fun,void *ectx)
488e884886fSBarry Smith {
489789d8953SBarry Smith   MatMFFD        ctx;
490789d8953SBarry Smith   PetscErrorCode ierr;
491e884886fSBarry Smith 
492e884886fSBarry Smith   PetscFunctionBegin;
493789d8953SBarry Smith   ierr = MatShellGetContext(J,&ctx);CHKERRQ(ierr);
494e884886fSBarry Smith   ctx->checkh    = fun;
495e884886fSBarry Smith   ctx->checkhctx = ectx;
496e884886fSBarry Smith   PetscFunctionReturn(0);
497e884886fSBarry Smith }
498e884886fSBarry Smith 
4996aa9148fSLisandro Dalcin /*@C
5006aa9148fSLisandro Dalcin    MatMFFDSetOptionsPrefix - Sets the prefix used for searching for all
5016aa9148fSLisandro Dalcin    MatMFFD options in the database.
5026aa9148fSLisandro Dalcin 
5036aa9148fSLisandro Dalcin    Collective on Mat
5046aa9148fSLisandro Dalcin 
505*d8d19677SJose E. Roman    Input Parameters:
5066aa9148fSLisandro Dalcin +  A - the Mat context
5076aa9148fSLisandro Dalcin -  prefix - the prefix to prepend to all option names
5086aa9148fSLisandro Dalcin 
5096aa9148fSLisandro Dalcin    Notes:
5106aa9148fSLisandro Dalcin    A hyphen (-) must NOT be given at the beginning of the prefix name.
5116aa9148fSLisandro Dalcin    The first character of all runtime options is AUTOMATICALLY the hyphen.
5126aa9148fSLisandro Dalcin 
5136aa9148fSLisandro Dalcin    Level: advanced
5146aa9148fSLisandro Dalcin 
515755b7f64SBarry Smith .seealso: MatSetFromOptions(), MatCreateSNESMF(), MatCreateMFFD()
5166aa9148fSLisandro Dalcin @*/
5177087cfbeSBarry Smith PetscErrorCode  MatMFFDSetOptionsPrefix(Mat mat,const char prefix[])
5186aa9148fSLisandro Dalcin 
5196aa9148fSLisandro Dalcin {
520789d8953SBarry Smith   MatMFFD        mfctx;
5216aa9148fSLisandro Dalcin   PetscErrorCode ierr;
5225fd66863SKarl Rupp 
5236aa9148fSLisandro Dalcin   PetscFunctionBegin;
5240700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
525789d8953SBarry Smith   ierr = MatShellGetContext(mat,&mfctx);CHKERRQ(ierr);
5260700a824SBarry Smith   PetscValidHeaderSpecific(mfctx,MATMFFD_CLASSID,1);
5276aa9148fSLisandro Dalcin   ierr = PetscObjectSetOptionsPrefix((PetscObject)mfctx,prefix);CHKERRQ(ierr);
5286aa9148fSLisandro Dalcin   PetscFunctionReturn(0);
5296aa9148fSLisandro Dalcin }
5306aa9148fSLisandro Dalcin 
53140244768SBarry Smith static PetscErrorCode  MatSetFromOptions_MFFD(PetscOptionItems *PetscOptionsObject,Mat mat)
532e884886fSBarry Smith {
533789d8953SBarry Smith   MatMFFD        mfctx;
534e884886fSBarry Smith   PetscErrorCode ierr;
535ace3abfcSBarry Smith   PetscBool      flg;
536e884886fSBarry Smith   char           ftype[256];
537e884886fSBarry Smith 
538e884886fSBarry Smith   PetscFunctionBegin;
539064a246eSJacob Faibussowitsch   PetscValidHeaderSpecific(mat,MAT_CLASSID,2);
540789d8953SBarry Smith   ierr = MatShellGetContext(mat,&mfctx);CHKERRQ(ierr);
541064a246eSJacob Faibussowitsch   PetscValidHeaderSpecific(mfctx,MATMFFD_CLASSID,2);
5423194b578SJed Brown   ierr = PetscObjectOptionsBegin((PetscObject)mfctx);CHKERRQ(ierr);
543a264d7a6SBarry Smith   ierr = PetscOptionsFList("-mat_mffd_type","Matrix free type","MatMFFDSetType",MatMFFDList,((PetscObject)mfctx)->type_name,ftype,256,&flg);CHKERRQ(ierr);
544e884886fSBarry Smith   if (flg) {
545e884886fSBarry Smith     ierr = MatMFFDSetType(mat,ftype);CHKERRQ(ierr);
546e884886fSBarry Smith   }
547e884886fSBarry Smith 
548f4259b30SLisandro Dalcin   ierr = PetscOptionsReal("-mat_mffd_err","set sqrt relative error in function","MatMFFDSetFunctionError",mfctx->error_rel,&mfctx->error_rel,NULL);CHKERRQ(ierr);
549f4259b30SLisandro Dalcin   ierr = PetscOptionsInt("-mat_mffd_period","how often h is recomputed","MatMFFDSetPeriod",mfctx->recomputeperiod,&mfctx->recomputeperiod,NULL);CHKERRQ(ierr);
550e884886fSBarry Smith 
55190d69ab7SBarry Smith   flg  = PETSC_FALSE;
5520298fd71SBarry Smith   ierr = PetscOptionsBool("-mat_mffd_check_positivity","Insure that U + h*a is nonnegative","MatMFFDSetCheckh",flg,&flg,NULL);CHKERRQ(ierr);
553e884886fSBarry Smith   if (flg) {
554f4259b30SLisandro Dalcin     ierr = MatMFFDSetCheckh(mat,MatMFFDCheckPositivity,NULL);CHKERRQ(ierr);
555e884886fSBarry Smith   }
556c92e3469SBarry Smith #if defined(PETSC_USE_COMPLEX)
557c92e3469SBarry Smith   ierr = PetscOptionsBool("-mat_mffd_complex","Use Lyness complex number trick to compute the matrix-vector product","None",mfctx->usecomplex,&mfctx->usecomplex,NULL);CHKERRQ(ierr);
558c92e3469SBarry Smith #endif
559e884886fSBarry Smith   if (mfctx->ops->setfromoptions) {
560e55864a3SBarry Smith     ierr = (*mfctx->ops->setfromoptions)(PetscOptionsObject,mfctx);CHKERRQ(ierr);
561e884886fSBarry Smith   }
562e884886fSBarry Smith   ierr = PetscOptionsEnd();CHKERRQ(ierr);
563e884886fSBarry Smith   PetscFunctionReturn(0);
564e884886fSBarry Smith }
565e884886fSBarry Smith 
56640244768SBarry Smith static PetscErrorCode  MatMFFDSetPeriod_MFFD(Mat mat,PetscInt period)
567bc0f08ceSBarry Smith {
568789d8953SBarry Smith   MatMFFD        ctx;
569789d8953SBarry Smith   PetscErrorCode ierr;
570bc0f08ceSBarry Smith 
571bc0f08ceSBarry Smith   PetscFunctionBegin;
572789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
573bc0f08ceSBarry Smith   ctx->recomputeperiod = period;
574bc0f08ceSBarry Smith   PetscFunctionReturn(0);
575bc0f08ceSBarry Smith }
576bc0f08ceSBarry Smith 
57740244768SBarry Smith static PetscErrorCode  MatMFFDSetFunction_MFFD(Mat mat,PetscErrorCode (*func)(void*,Vec,Vec),void *funcctx)
578bc0f08ceSBarry Smith {
579789d8953SBarry Smith   MatMFFD        ctx;
580789d8953SBarry Smith   PetscErrorCode ierr;
581bc0f08ceSBarry Smith 
582bc0f08ceSBarry Smith   PetscFunctionBegin;
583789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
584bc0f08ceSBarry Smith   ctx->func    = func;
585bc0f08ceSBarry Smith   ctx->funcctx = funcctx;
586bc0f08ceSBarry Smith   PetscFunctionReturn(0);
587bc0f08ceSBarry Smith }
588bc0f08ceSBarry Smith 
58940244768SBarry Smith static PetscErrorCode  MatMFFDSetFunctionError_MFFD(Mat mat,PetscReal error)
590bc0f08ceSBarry Smith {
591789d8953SBarry Smith   MatMFFD        ctx;
592789d8953SBarry Smith   PetscErrorCode ierr;
593bc0f08ceSBarry Smith 
594bc0f08ceSBarry Smith   PetscFunctionBegin;
595789d8953SBarry Smith   ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr);
596bc0f08ceSBarry Smith   if (error != PETSC_DEFAULT) ctx->error_rel = error;
597bc0f08ceSBarry Smith   PetscFunctionReturn(0);
598bc0f08ceSBarry Smith }
599bc0f08ceSBarry Smith 
600789d8953SBarry Smith PetscErrorCode  MatMFFDSetHHistory_MFFD(Mat J,PetscScalar history[],PetscInt nhistory)
6013b49f96aSBarry Smith {
602789d8953SBarry Smith   MatMFFD        ctx;
603789d8953SBarry Smith   PetscErrorCode ierr;
604789d8953SBarry Smith 
6053b49f96aSBarry Smith   PetscFunctionBegin;
606789d8953SBarry Smith   ierr = MatShellGetContext(J,&ctx);CHKERRQ(ierr);
607789d8953SBarry Smith   ctx->historyh    = history;
608789d8953SBarry Smith   ctx->maxcurrenth = nhistory;
609789d8953SBarry Smith   ctx->currenth    = 0.;
6103b49f96aSBarry Smith   PetscFunctionReturn(0);
6113b49f96aSBarry Smith }
6123b49f96aSBarry Smith 
613e884886fSBarry Smith /*MC
614e884886fSBarry Smith   MATMFFD - MATMFFD = "mffd" - A matrix free matrix type.
615e884886fSBarry Smith 
616e884886fSBarry Smith   Level: advanced
617e884886fSBarry Smith 
618789d8953SBarry Smith   Developers Note: This is implemented on top of MATSHELL to get support for scaling and shifting without requiring duplicate code
619789d8953SBarry Smith 
620755b7f64SBarry Smith .seealso: MatCreateMFFD(), MatCreateSNESMF(), MatMFFDSetFunction(), MatMFFDSetType(),
621755b7f64SBarry Smith           MatMFFDSetFunctionError(), MatMFFDDSSetUmin(), MatMFFDSetFunction()
622755b7f64SBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory(), MatCreateSNESMF(),
623755b7f64SBarry Smith           MatMFFDGetH(),
624e884886fSBarry Smith M*/
6258cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MFFD(Mat A)
626e884886fSBarry Smith {
627e884886fSBarry Smith   MatMFFD        mfctx;
628e884886fSBarry Smith   PetscErrorCode ierr;
629e884886fSBarry Smith 
630e884886fSBarry Smith   PetscFunctionBegin;
631607a6623SBarry Smith   ierr = MatMFFDInitializePackage();CHKERRQ(ierr);
632e884886fSBarry Smith 
633789d8953SBarry Smith   ierr = PetscHeaderCreate(mfctx,MATMFFD_CLASSID,"MatMFFD","Matrix-free Finite Differencing","Mat",PetscObjectComm((PetscObject)A),NULL,NULL);CHKERRQ(ierr);
6342205254eSKarl Rupp 
635e884886fSBarry Smith   mfctx->error_rel                = PETSC_SQRT_MACHINE_EPSILON;
636e884886fSBarry Smith   mfctx->recomputeperiod          = 1;
637e884886fSBarry Smith   mfctx->count                    = 0;
638e884886fSBarry Smith   mfctx->currenth                 = 0.0;
6390298fd71SBarry Smith   mfctx->historyh                 = NULL;
640e884886fSBarry Smith   mfctx->ncurrenth                = 0;
641e884886fSBarry Smith   mfctx->maxcurrenth              = 0;
642f4259b30SLisandro Dalcin   ((PetscObject)mfctx)->type_name = NULL;
643e884886fSBarry Smith 
644e884886fSBarry Smith   /*
645e884886fSBarry Smith      Create the empty data structure to contain compute-h routines.
646e884886fSBarry Smith      These will be filled in below from the command line options or
647e884886fSBarry Smith      a later call with MatMFFDSetType() or if that is not called
648e884886fSBarry Smith      then it will default in the first use of MatMult_MFFD()
649e884886fSBarry Smith   */
650f4259b30SLisandro Dalcin   mfctx->ops->compute        = NULL;
651f4259b30SLisandro Dalcin   mfctx->ops->destroy        = NULL;
652f4259b30SLisandro Dalcin   mfctx->ops->view           = NULL;
653f4259b30SLisandro Dalcin   mfctx->ops->setfromoptions = NULL;
654f4259b30SLisandro Dalcin   mfctx->hctx                = NULL;
655e884886fSBarry Smith 
656f4259b30SLisandro Dalcin   mfctx->func    = NULL;
657f4259b30SLisandro Dalcin   mfctx->funcctx = NULL;
6580298fd71SBarry Smith   mfctx->w       = NULL;
659789d8953SBarry Smith   mfctx->mat     = A;
660e884886fSBarry Smith 
661789d8953SBarry Smith   ierr = MatSetType(A,MATSHELL);CHKERRQ(ierr);
662789d8953SBarry Smith   ierr = MatShellSetContext(A,mfctx);CHKERRQ(ierr);
663789d8953SBarry Smith   ierr = MatShellSetOperation(A,MATOP_MULT,(void (*)(void))MatMult_MFFD);CHKERRQ(ierr);
664789d8953SBarry Smith   ierr = MatShellSetOperation(A,MATOP_DESTROY,(void (*)(void))MatDestroy_MFFD);CHKERRQ(ierr);
665789d8953SBarry Smith   ierr = MatShellSetOperation(A,MATOP_VIEW,(void (*)(void))MatView_MFFD);CHKERRQ(ierr);
666789d8953SBarry Smith   ierr = MatShellSetOperation(A,MATOP_ASSEMBLY_END,(void (*)(void))MatAssemblyEnd_MFFD);CHKERRQ(ierr);
667789d8953SBarry Smith   ierr = MatShellSetOperation(A,MATOP_SET_FROM_OPTIONS,(void (*)(void))MatSetFromOptions_MFFD);CHKERRQ(ierr);
668e884886fSBarry Smith 
669bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetBase_C",MatMFFDSetBase_MFFD);CHKERRQ(ierr);
670bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunctioniBase_C",MatMFFDSetFunctioniBase_MFFD);CHKERRQ(ierr);
671bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunctioni_C",MatMFFDSetFunctioni_MFFD);CHKERRQ(ierr);
672bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunction_C",MatMFFDSetFunction_MFFD);CHKERRQ(ierr);
673bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetCheckh_C",MatMFFDSetCheckh_MFFD);CHKERRQ(ierr);
674bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetPeriod_C",MatMFFDSetPeriod_MFFD);CHKERRQ(ierr);
675bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetFunctionError_C",MatMFFDSetFunctionError_MFFD);CHKERRQ(ierr);
676bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDResetHHistory_C",MatMFFDResetHHistory_MFFD);CHKERRQ(ierr);
677789d8953SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetHHistory_C",MatMFFDSetHHistory_MFFD);CHKERRQ(ierr);
678789d8953SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDSetType_C",MatMFFDSetType_MFFD);CHKERRQ(ierr);
679789d8953SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMFFDGetH_C",MatMFFDGetH_MFFD);CHKERRQ(ierr);
680e884886fSBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)A,MATMFFD);CHKERRQ(ierr);
681e884886fSBarry Smith   PetscFunctionReturn(0);
682e884886fSBarry Smith }
683e884886fSBarry Smith 
684e884886fSBarry Smith /*@
685e884886fSBarry Smith    MatCreateMFFD - Creates a matrix-free matrix. See also MatCreateSNESMF()
686e884886fSBarry Smith 
687e884886fSBarry Smith    Collective on Vec
688e884886fSBarry Smith 
689e884886fSBarry Smith    Input Parameters:
690fef1beadSBarry Smith +  comm - MPI communicator
691fef1beadSBarry Smith .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
692fef1beadSBarry Smith            This value should be the same as the local size used in creating the
693fef1beadSBarry Smith            y vector for the matrix-vector product y = Ax.
694fef1beadSBarry Smith .  n - This value should be the same as the local size used in creating the
695fef1beadSBarry Smith        x vector for the matrix-vector product y = Ax. (or PETSC_DECIDE to have
696fef1beadSBarry Smith        calculated if N is given) For square matrices n is almost always m.
697fef1beadSBarry Smith .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
698fef1beadSBarry Smith -  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
699fef1beadSBarry Smith 
700e884886fSBarry Smith    Output Parameter:
701e884886fSBarry Smith .  J - the matrix-free matrix
702e884886fSBarry Smith 
7039c6ac3b3SBarry Smith    Options Database Keys: call MatSetFromOptions() to trigger these
7049c6ac3b3SBarry Smith +  -mat_mffd_type - wp or ds (see MATMFFD_WP or MATMFFD_DS)
705c92e3469SBarry Smith .  -mat_mffd_err - square root of estimated relative error in function evaluation
706c92e3469SBarry Smith .  -mat_mffd_period - how often h is recomputed, defaults to 1, everytime
707c92e3469SBarry Smith .  -mat_mffd_check_positivity - possibly decrease h until U + h*a has only positive values
708c92e3469SBarry Smith -  -mat_mffd_complex - use the Lyness trick with complex numbers to compute the matrix-vector product instead of differencing
709c92e3469SBarry Smith                        (requires real valued functions but that PETSc be configured for complex numbers)
7109c6ac3b3SBarry Smith 
711e884886fSBarry Smith    Level: advanced
712e884886fSBarry Smith 
713e884886fSBarry Smith    Notes:
714e884886fSBarry Smith    The matrix-free matrix context merely contains the function pointers
715e884886fSBarry Smith    and work space for performing finite difference approximations of
716e884886fSBarry Smith    Jacobian-vector products, F'(u)*a,
717e884886fSBarry Smith 
718e884886fSBarry Smith    The default code uses the following approach to compute h
719e884886fSBarry Smith 
720e884886fSBarry Smith .vb
721e884886fSBarry Smith      F'(u)*a = [F(u+h*a) - F(u)]/h where
722e884886fSBarry Smith      h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
723e884886fSBarry Smith        = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   otherwise
724e884886fSBarry Smith  where
725e884886fSBarry Smith      error_rel = square root of relative error in function evaluation
726e884886fSBarry Smith      umin = minimum iterate parameter
727e884886fSBarry Smith .ve
728e884886fSBarry Smith 
729ca93e954SBarry Smith    You can call SNESSetJacobian() with MatMFFDComputeJacobian() if you are using matrix and not a different
730ca93e954SBarry Smith    preconditioner matrix
731ca93e954SBarry Smith 
732e884886fSBarry Smith    The user can set the error_rel via MatMFFDSetFunctionError() and
733a7f22e61SSatish Balay    umin via MatMFFDDSSetUmin(); see Users-Manual: ch_snes for details.
734e884886fSBarry Smith 
735e884886fSBarry Smith    The user should call MatDestroy() when finished with the matrix-free
736e884886fSBarry Smith    matrix context.
737e884886fSBarry Smith 
738e884886fSBarry Smith    Options Database Keys:
739e884886fSBarry Smith +  -mat_mffd_err <error_rel> - Sets error_rel
740e884886fSBarry Smith .  -mat_mffd_unim <umin> - Sets umin (for default PETSc routine that computes h only)
741e884886fSBarry Smith -  -mat_mffd_check_positivity
742e884886fSBarry Smith 
7431d0fab5eSBarry Smith .seealso: MatDestroy(), MatMFFDSetFunctionError(), MatMFFDDSSetUmin(), MatMFFDSetFunction()
744e884886fSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory(), MatCreateSNESMF(),
74581242352SJed Brown           MatMFFDGetH(), MatMFFDRegister(), MatMFFDComputeJacobian()
746e884886fSBarry Smith 
747e884886fSBarry Smith @*/
7487087cfbeSBarry Smith PetscErrorCode  MatCreateMFFD(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,Mat *J)
749e884886fSBarry Smith {
750e884886fSBarry Smith   PetscErrorCode ierr;
751e884886fSBarry Smith 
752e884886fSBarry Smith   PetscFunctionBegin;
753e884886fSBarry Smith   ierr = MatCreate(comm,J);CHKERRQ(ierr);
754fef1beadSBarry Smith   ierr = MatSetSizes(*J,m,n,M,N);CHKERRQ(ierr);
755e884886fSBarry Smith   ierr = MatSetType(*J,MATMFFD);CHKERRQ(ierr);
756be7c243fSJed Brown   ierr = MatSetUp(*J);CHKERRQ(ierr);
757e884886fSBarry Smith   PetscFunctionReturn(0);
758e884886fSBarry Smith }
759e884886fSBarry Smith 
760e884886fSBarry Smith /*@
761e884886fSBarry Smith    MatMFFDGetH - Gets the last value that was used as the differencing
762e884886fSBarry Smith    parameter.
763e884886fSBarry Smith 
764e884886fSBarry Smith    Not Collective
765e884886fSBarry Smith 
766e884886fSBarry Smith    Input Parameters:
767e884886fSBarry Smith .  mat - the matrix obtained with MatCreateSNESMF()
768e884886fSBarry Smith 
769fd292e60Sprj-    Output Parameter:
770e884886fSBarry Smith .  h - the differencing step size
771e884886fSBarry Smith 
772e884886fSBarry Smith    Level: advanced
773e884886fSBarry Smith 
7741d0fab5eSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDSetHHistory(), MatCreateMFFD(), MATMFFD, MatMFFDResetHHistory()
775e884886fSBarry Smith @*/
7767087cfbeSBarry Smith PetscErrorCode  MatMFFDGetH(Mat mat,PetscScalar *h)
777e884886fSBarry Smith {
778bc0f08ceSBarry Smith   PetscErrorCode ierr;
779e884886fSBarry Smith 
780e884886fSBarry Smith   PetscFunctionBegin;
78188b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
78288b4c220SStefano Zampini   PetscValidPointer(h,2);
783789d8953SBarry Smith   ierr = PetscUseMethod(mat,"MatMFFDGetH_C",(Mat,PetscScalar*),(mat,h));CHKERRQ(ierr);
784e884886fSBarry Smith   PetscFunctionReturn(0);
785e884886fSBarry Smith }
786e884886fSBarry Smith 
787e884886fSBarry Smith /*@C
788e884886fSBarry Smith    MatMFFDSetFunction - Sets the function used in applying the matrix free.
789e884886fSBarry Smith 
7903f9fe445SBarry Smith    Logically Collective on Mat
791e884886fSBarry Smith 
792e884886fSBarry Smith    Input Parameters:
79314f633e2SBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF() or MatCreateMFFD()
794e884886fSBarry Smith .  func - the function to use
795e884886fSBarry Smith -  funcctx - optional function context passed to function
796e884886fSBarry Smith 
79714f633e2SBarry Smith    Calling Sequence of func:
79814f633e2SBarry Smith $     func (void *funcctx, Vec x, Vec f)
79914f633e2SBarry Smith 
80014f633e2SBarry Smith +  funcctx - user provided context
80114f633e2SBarry Smith .  x - input vector
80214f633e2SBarry Smith -  f - computed output function
80314f633e2SBarry Smith 
804e884886fSBarry Smith    Level: advanced
805e884886fSBarry Smith 
806e884886fSBarry Smith    Notes:
807e884886fSBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
808e884886fSBarry Smith     matrix inside your compute Jacobian routine
809e884886fSBarry Smith 
8103ec795f1SBarry Smith     If this is not set then it will use the function set with SNESSetFunction() if MatCreateSNESMF() was used.
811e884886fSBarry Smith 
8121d0fab5eSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatCreateMFFD(), MATMFFD,
8131d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory(), SNESetFunction()
814e884886fSBarry Smith @*/
8157087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunction(Mat mat,PetscErrorCode (*func)(void*,Vec,Vec),void *funcctx)
816e884886fSBarry Smith {
817bc0f08ceSBarry Smith   PetscErrorCode ierr;
818e884886fSBarry Smith 
819e884886fSBarry Smith   PetscFunctionBegin;
82088b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
821bc0f08ceSBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunction_C",(Mat,PetscErrorCode (*)(void*,Vec,Vec),void*),(mat,func,funcctx));CHKERRQ(ierr);
822e884886fSBarry Smith   PetscFunctionReturn(0);
823e884886fSBarry Smith }
824e884886fSBarry Smith 
825e884886fSBarry Smith /*@C
826e884886fSBarry Smith    MatMFFDSetFunctioni - Sets the function for a single component
827e884886fSBarry Smith 
8283f9fe445SBarry Smith    Logically Collective on Mat
829e884886fSBarry Smith 
830e884886fSBarry Smith    Input Parameters:
831e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
832e884886fSBarry Smith -  funci - the function to use
833e884886fSBarry Smith 
834e884886fSBarry Smith    Level: advanced
835e884886fSBarry Smith 
836e884886fSBarry Smith    Notes:
837e884886fSBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
83894eb4328SStefano Zampini     matrix inside your compute Jacobian routine.
83994eb4328SStefano Zampini     This function is necessary to compute the diagonal of the matrix.
840486afcceSStefano Zampini     funci must not contain any MPI call as it is called inside a loop on the local portion of the vector.
841e884886fSBarry Smith 
84294eb4328SStefano Zampini .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatMFFDSetHHistory(), MatMFFDResetHHistory(), SNESetFunction(), MatGetDiagonal()
8431d0fab5eSBarry Smith 
844e884886fSBarry Smith @*/
8457087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunctioni(Mat mat,PetscErrorCode (*funci)(void*,PetscInt,Vec,PetscScalar*))
846e884886fSBarry Smith {
8474ac538c5SBarry Smith   PetscErrorCode ierr;
848e884886fSBarry Smith 
849e884886fSBarry Smith   PetscFunctionBegin;
8500700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
8514ac538c5SBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunctioni_C",(Mat,PetscErrorCode (*)(void*,PetscInt,Vec,PetscScalar*)),(mat,funci));CHKERRQ(ierr);
852e884886fSBarry Smith   PetscFunctionReturn(0);
853e884886fSBarry Smith }
854e884886fSBarry Smith 
855e884886fSBarry Smith /*@C
856e884886fSBarry Smith    MatMFFDSetFunctioniBase - Sets the base vector for a single component function evaluation
857e884886fSBarry Smith 
8583f9fe445SBarry Smith    Logically Collective on Mat
859e884886fSBarry Smith 
860e884886fSBarry Smith    Input Parameters:
861e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
862e884886fSBarry Smith -  func - the function to use
863e884886fSBarry Smith 
864e884886fSBarry Smith    Level: advanced
865e884886fSBarry Smith 
866e884886fSBarry Smith    Notes:
867e884886fSBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
86894eb4328SStefano Zampini     matrix inside your compute Jacobian routine.
86994eb4328SStefano Zampini     This function is necessary to compute the diagonal of the matrix.
870e884886fSBarry Smith 
871e884886fSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatCreateMFFD(), MATMFFD
87294eb4328SStefano Zampini           MatMFFDSetHHistory(), MatMFFDResetHHistory(), SNESetFunction(), MatGetDiagonal()
873e884886fSBarry Smith @*/
8747087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunctioniBase(Mat mat,PetscErrorCode (*func)(void*,Vec))
875e884886fSBarry Smith {
8764ac538c5SBarry Smith   PetscErrorCode ierr;
877e884886fSBarry Smith 
878e884886fSBarry Smith   PetscFunctionBegin;
8790700a824SBarry Smith   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
8804ac538c5SBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunctioniBase_C",(Mat,PetscErrorCode (*)(void*,Vec)),(mat,func));CHKERRQ(ierr);
881e884886fSBarry Smith   PetscFunctionReturn(0);
882e884886fSBarry Smith }
883e884886fSBarry Smith 
884e884886fSBarry Smith /*@
885e884886fSBarry Smith    MatMFFDSetPeriod - Sets how often h is recomputed, by default it is everytime
886e884886fSBarry Smith 
8873f9fe445SBarry Smith    Logically Collective on Mat
888e884886fSBarry Smith 
889e884886fSBarry Smith    Input Parameters:
890e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
891e884886fSBarry Smith -  period - 1 for everytime, 2 for every second etc
892e884886fSBarry Smith 
893e884886fSBarry Smith    Options Database Keys:
894a2b725a8SWilliam Gropp .  -mat_mffd_period <period>
895e884886fSBarry Smith 
896e884886fSBarry Smith    Level: advanced
897e884886fSBarry Smith 
898e884886fSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(),
8991d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory()
900e884886fSBarry Smith @*/
9017087cfbeSBarry Smith PetscErrorCode  MatMFFDSetPeriod(Mat mat,PetscInt period)
902e884886fSBarry Smith {
903bc0f08ceSBarry Smith   PetscErrorCode ierr;
904e884886fSBarry Smith 
905e884886fSBarry Smith   PetscFunctionBegin;
90688b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
90788b4c220SStefano Zampini   PetscValidLogicalCollectiveInt(mat,period,2);
908bc0f08ceSBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetPeriod_C",(Mat,PetscInt),(mat,period));CHKERRQ(ierr);
909e884886fSBarry Smith   PetscFunctionReturn(0);
910e884886fSBarry Smith }
911e884886fSBarry Smith 
912e884886fSBarry Smith /*@
913e884886fSBarry Smith    MatMFFDSetFunctionError - Sets the error_rel for the approximation of
914e884886fSBarry Smith    matrix-vector products using finite differences.
915e884886fSBarry Smith 
9163f9fe445SBarry Smith    Logically Collective on Mat
917e884886fSBarry Smith 
918e884886fSBarry Smith    Input Parameters:
919e884886fSBarry Smith +  mat - the matrix free matrix created via MatCreateMFFD() or MatCreateSNESMF()
920e884886fSBarry Smith -  error_rel - relative error (should be set to the square root of
921e884886fSBarry Smith                the relative error in the function evaluations)
922e884886fSBarry Smith 
923e884886fSBarry Smith    Options Database Keys:
924a2b725a8SWilliam Gropp .  -mat_mffd_err <error_rel> - Sets error_rel
925e884886fSBarry Smith 
926e884886fSBarry Smith    Level: advanced
927e884886fSBarry Smith 
928e884886fSBarry Smith    Notes:
929e884886fSBarry Smith    The default matrix-free matrix-vector product routine computes
930e884886fSBarry Smith .vb
931e884886fSBarry Smith      F'(u)*a = [F(u+h*a) - F(u)]/h where
932e884886fSBarry Smith      h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
933e884886fSBarry Smith        = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   else
934e884886fSBarry Smith .ve
935e884886fSBarry Smith 
936e884886fSBarry Smith .seealso: MatCreateSNESMF(),MatMFFDGetH(), MatCreateMFFD(), MATMFFD
9371d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDResetHHistory()
938e884886fSBarry Smith @*/
9397087cfbeSBarry Smith PetscErrorCode  MatMFFDSetFunctionError(Mat mat,PetscReal error)
940e884886fSBarry Smith {
941bc0f08ceSBarry Smith   PetscErrorCode ierr;
942e884886fSBarry Smith 
943e884886fSBarry Smith   PetscFunctionBegin;
94488b4c220SStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
94588b4c220SStefano Zampini   PetscValidLogicalCollectiveReal(mat,error,2);
946bc0f08ceSBarry Smith   ierr = PetscTryMethod(mat,"MatMFFDSetFunctionError_C",(Mat,PetscReal),(mat,error));CHKERRQ(ierr);
947e884886fSBarry Smith   PetscFunctionReturn(0);
948e884886fSBarry Smith }
949e884886fSBarry Smith 
950e884886fSBarry Smith /*@
951e884886fSBarry Smith    MatMFFDSetHHistory - Sets an array to collect a history of the
952e884886fSBarry Smith    differencing values (h) computed for the matrix-free product.
953e884886fSBarry Smith 
9543f9fe445SBarry Smith    Logically Collective on Mat
955e884886fSBarry Smith 
956e884886fSBarry Smith    Input Parameters:
957e884886fSBarry Smith +  J - the matrix-free matrix context
958a5b23f4aSJose E. Roman .  history - space to hold the history
959e884886fSBarry Smith -  nhistory - number of entries in history, if more entries are generated than
960e884886fSBarry Smith               nhistory, then the later ones are discarded
961e884886fSBarry Smith 
962e884886fSBarry Smith    Level: advanced
963e884886fSBarry Smith 
964e884886fSBarry Smith    Notes:
965e884886fSBarry Smith    Use MatMFFDResetHHistory() to reset the history counter and collect
966e884886fSBarry Smith    a new batch of differencing parameters, h.
967e884886fSBarry Smith 
968e884886fSBarry Smith .seealso: MatMFFDGetH(), MatCreateSNESMF(),
9691d0fab5eSBarry Smith           MatMFFDResetHHistory(), MatMFFDSetFunctionError()
970e884886fSBarry Smith 
971e884886fSBarry Smith @*/
9727087cfbeSBarry Smith PetscErrorCode  MatMFFDSetHHistory(Mat J,PetscScalar history[],PetscInt nhistory)
973e884886fSBarry Smith {
974bc0f08ceSBarry Smith   PetscErrorCode ierr;
975e884886fSBarry Smith 
976e884886fSBarry Smith   PetscFunctionBegin;
97788b4c220SStefano Zampini   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
97888b4c220SStefano Zampini   if (history) PetscValidPointer(history,2);
97988b4c220SStefano Zampini   PetscValidLogicalCollectiveInt(J,nhistory,3);
980789d8953SBarry Smith   ierr = PetscUseMethod(J,"MatMFFDSetHHistory_C",(Mat,PetscScalar[],PetscInt),(J,history,nhistory));CHKERRQ(ierr);
981e884886fSBarry Smith   PetscFunctionReturn(0);
982e884886fSBarry Smith }
983e884886fSBarry Smith 
984e884886fSBarry Smith /*@
985e884886fSBarry Smith    MatMFFDResetHHistory - Resets the counter to zero to begin
986e884886fSBarry Smith    collecting a new set of differencing histories.
987e884886fSBarry Smith 
9883f9fe445SBarry Smith    Logically Collective on Mat
989e884886fSBarry Smith 
990e884886fSBarry Smith    Input Parameters:
991e884886fSBarry Smith .  J - the matrix-free matrix context
992e884886fSBarry Smith 
993e884886fSBarry Smith    Level: advanced
994e884886fSBarry Smith 
995e884886fSBarry Smith    Notes:
996e884886fSBarry Smith    Use MatMFFDSetHHistory() to create the original history counter.
997e884886fSBarry Smith 
998e884886fSBarry Smith .seealso: MatMFFDGetH(), MatCreateSNESMF(),
9991d0fab5eSBarry Smith           MatMFFDSetHHistory(), MatMFFDSetFunctionError()
1000e884886fSBarry Smith 
1001e884886fSBarry Smith @*/
10027087cfbeSBarry Smith PetscErrorCode  MatMFFDResetHHistory(Mat J)
1003e884886fSBarry Smith {
1004bc0f08ceSBarry Smith   PetscErrorCode ierr;
1005e884886fSBarry Smith 
1006e884886fSBarry Smith   PetscFunctionBegin;
100788b4c220SStefano Zampini   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
1008bc0f08ceSBarry Smith   ierr = PetscTryMethod(J,"MatMFFDResetHHistory_C",(Mat),(J));CHKERRQ(ierr);
1009e884886fSBarry Smith   PetscFunctionReturn(0);
1010e884886fSBarry Smith }
1011e884886fSBarry Smith 
1012487a658cSBarry Smith /*@
1013e884886fSBarry Smith     MatMFFDSetBase - Sets the vector U at which matrix vector products of the
1014e884886fSBarry Smith         Jacobian are computed
1015e884886fSBarry Smith 
10163f9fe445SBarry Smith     Logically Collective on Mat
1017e884886fSBarry Smith 
1018e884886fSBarry Smith     Input Parameters:
1019e884886fSBarry Smith +   J - the MatMFFD matrix
10203ec795f1SBarry Smith .   U - the vector
1021bcddec3dSBarry Smith -   F - (optional) vector that contains F(u) if it has been already computed
1022e884886fSBarry Smith 
102395452b02SPatrick Sanan     Notes:
102495452b02SPatrick Sanan     This is rarely used directly
1025e884886fSBarry Smith 
10268af5ae88SBarry Smith     If F is provided then it is not recomputed. Otherwise the function is evaluated at the base
10278af5ae88SBarry Smith     point during the first MatMult() after each call to MatMFFDSetBase().
1028dff2f722SBarry Smith 
1029e884886fSBarry Smith     Level: advanced
1030e884886fSBarry Smith 
1031e884886fSBarry Smith @*/
10327087cfbeSBarry Smith PetscErrorCode  MatMFFDSetBase(Mat J,Vec U,Vec F)
1033e884886fSBarry Smith {
10344ac538c5SBarry Smith   PetscErrorCode ierr;
1035e884886fSBarry Smith 
1036e884886fSBarry Smith   PetscFunctionBegin;
10370700a824SBarry Smith   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
10380700a824SBarry Smith   PetscValidHeaderSpecific(U,VEC_CLASSID,2);
10390700a824SBarry Smith   if (F) PetscValidHeaderSpecific(F,VEC_CLASSID,3);
10404ac538c5SBarry Smith   ierr = PetscTryMethod(J,"MatMFFDSetBase_C",(Mat,Vec,Vec),(J,U,F));CHKERRQ(ierr);
1041e884886fSBarry Smith   PetscFunctionReturn(0);
1042e884886fSBarry Smith }
1043e884886fSBarry Smith 
1044e884886fSBarry Smith /*@C
1045e884886fSBarry Smith     MatMFFDSetCheckh - Sets a function that checks the computed h and adjusts
1046e884886fSBarry Smith         it to satisfy some criteria
1047e884886fSBarry Smith 
10483f9fe445SBarry Smith     Logically Collective on Mat
1049e884886fSBarry Smith 
1050e884886fSBarry Smith     Input Parameters:
1051e884886fSBarry Smith +   J - the MatMFFD matrix
1052e884886fSBarry Smith .   fun - the function that checks h
1053e884886fSBarry Smith -   ctx - any context needed by the function
1054e884886fSBarry Smith 
1055e884886fSBarry Smith     Options Database Keys:
1056e884886fSBarry Smith .   -mat_mffd_check_positivity
1057e884886fSBarry Smith 
1058e884886fSBarry Smith     Level: advanced
1059e884886fSBarry Smith 
106095452b02SPatrick Sanan     Notes:
106195452b02SPatrick Sanan     For example, MatMFFDCheckPositivity() insures that all entries
1062e884886fSBarry Smith        of U + h*a are non-negative
1063e884886fSBarry Smith 
1064755b7f64SBarry Smith      The function you provide is called after the default h has been computed and allows you to
1065755b7f64SBarry Smith      modify it.
1066755b7f64SBarry Smith 
1067755b7f64SBarry Smith .seealso:  MatMFFDCheckPositivity()
1068e884886fSBarry Smith @*/
10697087cfbeSBarry Smith PetscErrorCode  MatMFFDSetCheckh(Mat J,PetscErrorCode (*fun)(void*,Vec,Vec,PetscScalar*),void *ctx)
1070e884886fSBarry Smith {
10714ac538c5SBarry Smith   PetscErrorCode ierr;
1072e884886fSBarry Smith 
1073e884886fSBarry Smith   PetscFunctionBegin;
10740700a824SBarry Smith   PetscValidHeaderSpecific(J,MAT_CLASSID,1);
10754ac538c5SBarry Smith   ierr = PetscTryMethod(J,"MatMFFDSetCheckh_C",(Mat,PetscErrorCode (*)(void*,Vec,Vec,PetscScalar*),void*),(J,fun,ctx));CHKERRQ(ierr);
1076e884886fSBarry Smith   PetscFunctionReturn(0);
1077e884886fSBarry Smith }
1078e884886fSBarry Smith 
1079e884886fSBarry Smith /*@
1080e884886fSBarry Smith     MatMFFDCheckPositivity - Checks that all entries in U + h*a are positive or
1081e884886fSBarry Smith         zero, decreases h until this is satisfied.
1082e884886fSBarry Smith 
10833f9fe445SBarry Smith     Logically Collective on Vec
1084e884886fSBarry Smith 
1085e884886fSBarry Smith     Input Parameters:
1086e884886fSBarry Smith +   U - base vector that is added to
1087e884886fSBarry Smith .   a - vector that is added
1088e884886fSBarry Smith .   h - scaling factor on a
1089e884886fSBarry Smith -   dummy - context variable (unused)
1090e884886fSBarry Smith 
1091e884886fSBarry Smith     Options Database Keys:
1092e884886fSBarry Smith .   -mat_mffd_check_positivity
1093e884886fSBarry Smith 
1094e884886fSBarry Smith     Level: advanced
1095e884886fSBarry Smith 
109695452b02SPatrick Sanan     Notes:
109795452b02SPatrick Sanan     This is rarely used directly, rather it is passed as an argument to
1098e884886fSBarry Smith            MatMFFDSetCheckh()
1099e884886fSBarry Smith 
1100e884886fSBarry Smith .seealso:  MatMFFDSetCheckh()
1101e884886fSBarry Smith @*/
11027087cfbeSBarry Smith PetscErrorCode  MatMFFDCheckPositivity(void *dummy,Vec U,Vec a,PetscScalar *h)
1103e884886fSBarry Smith {
1104e884886fSBarry Smith   PetscReal      val, minval;
1105e884886fSBarry Smith   PetscScalar    *u_vec, *a_vec;
1106e884886fSBarry Smith   PetscErrorCode ierr;
1107e884886fSBarry Smith   PetscInt       i,n;
1108e884886fSBarry Smith   MPI_Comm       comm;
1109e884886fSBarry Smith 
1110e884886fSBarry Smith   PetscFunctionBegin;
111188b4c220SStefano Zampini   PetscValidHeaderSpecific(U,VEC_CLASSID,2);
111288b4c220SStefano Zampini   PetscValidHeaderSpecific(a,VEC_CLASSID,3);
111388b4c220SStefano Zampini   PetscValidPointer(h,4);
1114e884886fSBarry Smith   ierr   = PetscObjectGetComm((PetscObject)U,&comm);CHKERRQ(ierr);
1115e884886fSBarry Smith   ierr   = VecGetArray(U,&u_vec);CHKERRQ(ierr);
1116e884886fSBarry Smith   ierr   = VecGetArray(a,&a_vec);CHKERRQ(ierr);
1117e884886fSBarry Smith   ierr   = VecGetLocalSize(U,&n);CHKERRQ(ierr);
1118c068d9bbSLisandro Dalcin   minval = PetscAbsScalar(*h)*PetscRealConstant(1.01);
1119e884886fSBarry Smith   for (i=0; i<n; i++) {
1120e884886fSBarry Smith     if (PetscRealPart(u_vec[i] + *h*a_vec[i]) <= 0.0) {
1121e884886fSBarry Smith       val = PetscAbsScalar(u_vec[i]/a_vec[i]);
1122e884886fSBarry Smith       if (val < minval) minval = val;
1123e884886fSBarry Smith     }
1124e884886fSBarry Smith   }
1125e884886fSBarry Smith   ierr = VecRestoreArray(U,&u_vec);CHKERRQ(ierr);
1126e884886fSBarry Smith   ierr = VecRestoreArray(a,&a_vec);CHKERRQ(ierr);
1127820f2d46SBarry Smith   ierr = MPIU_Allreduce(&minval,&val,1,MPIU_REAL,MPIU_MIN,comm);CHKERRMPI(ierr);
1128e884886fSBarry Smith   if (val <= PetscAbsScalar(*h)) {
11296712e2f1SBarry Smith     ierr = PetscInfo2(U,"Scaling back h from %g to %g\n",(double)PetscRealPart(*h),(double)(.99*val));CHKERRQ(ierr);
1130e884886fSBarry Smith     if (PetscRealPart(*h) > 0.0) *h =  0.99*val;
1131e884886fSBarry Smith     else                         *h = -0.99*val;
1132e884886fSBarry Smith   }
1133e884886fSBarry Smith   PetscFunctionReturn(0);
1134e884886fSBarry Smith }
1135