1e884886fSBarry Smith 2e884886fSBarry Smith /* 3e884886fSBarry Smith Implements the DS PETSc approach for computing the h 4e884886fSBarry Smith parameter used with the finite difference based matrix-free 5e884886fSBarry Smith Jacobian-vector products. 6e884886fSBarry Smith 7e884886fSBarry Smith To make your own: clone this file and modify for your needs. 8e884886fSBarry Smith 9e884886fSBarry Smith Mandatory functions: 10e884886fSBarry Smith ------------------- 11e884886fSBarry Smith MatMFFDCompute_ - for a given point and direction computes h 12e884886fSBarry Smith 131d0fab5eSBarry Smith MatCreateMFFD _ - fills in the MatMFFD data structure 14e884886fSBarry Smith for this particular implementation 15e884886fSBarry Smith 16e884886fSBarry Smith Optional functions: 17e884886fSBarry Smith ------------------- 18e884886fSBarry Smith MatMFFDView_ - prints information about the parameters being used. 19e884886fSBarry Smith This is called when SNESView() or -snes_view is used. 20e884886fSBarry Smith 21e884886fSBarry Smith MatMFFDSetFromOptions_ - checks the options database for options that 22e884886fSBarry Smith apply to this method. 23e884886fSBarry Smith 24e884886fSBarry Smith MatMFFDDestroy_ - frees any space allocated by the routines above 25e884886fSBarry Smith 26e884886fSBarry Smith */ 27e884886fSBarry Smith 28e884886fSBarry Smith /* 29e884886fSBarry Smith This include file defines the data structure MatMFFD that 30e884886fSBarry Smith includes information about the computation of h. It is shared by 31e884886fSBarry Smith all implementations that people provide 32e884886fSBarry Smith */ 33af0996ceSBarry Smith #include <petsc/private/matimpl.h> 34c6db04a5SJed Brown #include <../src/mat/impls/mffd/mffdimpl.h> /*I "petscmat.h" I*/ 35e884886fSBarry Smith 36e884886fSBarry Smith /* 37e884886fSBarry Smith The method has one parameter that is used to 38e884886fSBarry Smith "cutoff" very small values. This is stored in a data structure 39e884886fSBarry Smith that is only visible to this file. If your method has no parameters 40e884886fSBarry Smith it can omit this, if it has several simply reorganize the data structure. 41e884886fSBarry Smith The data structure is "hung-off" the MatMFFD data structure in 42e884886fSBarry Smith the void *hctx; field. 43e884886fSBarry Smith */ 44e884886fSBarry Smith typedef struct { 45e884886fSBarry Smith PetscReal umin; /* minimum allowable u'a value relative to |u|_1 */ 46e884886fSBarry Smith } MatMFFD_DS; 47e884886fSBarry Smith 48e884886fSBarry Smith /* 49e884886fSBarry Smith MatMFFDCompute_DS - Standard PETSc code for computing the 50fd292e60Sprj- differencing parameter (h) for use with matrix-free finite differences. 51e884886fSBarry Smith 52e884886fSBarry Smith Input Parameters: 53e884886fSBarry Smith + ctx - the matrix free context 54e884886fSBarry Smith . U - the location at which you want the Jacobian 55e884886fSBarry Smith - a - the direction you want the derivative 56e884886fSBarry Smith 57e884886fSBarry Smith Output Parameter: 58e884886fSBarry Smith . h - the scale computed 59e884886fSBarry Smith 60e884886fSBarry Smith */ 61ace3abfcSBarry Smith static PetscErrorCode MatMFFDCompute_DS(MatMFFD ctx,Vec U,Vec a,PetscScalar *h,PetscBool *zeroa) 62e884886fSBarry Smith { 63e884886fSBarry Smith MatMFFD_DS *hctx = (MatMFFD_DS*)ctx->hctx; 64e884886fSBarry Smith PetscReal nrm,sum,umin = hctx->umin; 65e884886fSBarry Smith PetscScalar dot; 66e884886fSBarry Smith PetscErrorCode ierr; 67e884886fSBarry Smith 68e884886fSBarry Smith PetscFunctionBegin; 69e884886fSBarry Smith if (!(ctx->count % ctx->recomputeperiod)) { 70e884886fSBarry Smith /* 71e884886fSBarry Smith This algorithm requires 2 norms and 1 inner product. Rather than 72e884886fSBarry Smith use directly the VecNorm() and VecDot() routines (and thus have 73e884886fSBarry Smith three separate collective operations, we use the VecxxxBegin/End() routines 74e884886fSBarry Smith */ 75e884886fSBarry Smith ierr = VecDotBegin(U,a,&dot);CHKERRQ(ierr); 76e884886fSBarry Smith ierr = VecNormBegin(a,NORM_1,&sum);CHKERRQ(ierr); 77e884886fSBarry Smith ierr = VecNormBegin(a,NORM_2,&nrm);CHKERRQ(ierr); 78e884886fSBarry Smith ierr = VecDotEnd(U,a,&dot);CHKERRQ(ierr); 79e884886fSBarry Smith ierr = VecNormEnd(a,NORM_1,&sum);CHKERRQ(ierr); 80e884886fSBarry Smith ierr = VecNormEnd(a,NORM_2,&nrm);CHKERRQ(ierr); 81e884886fSBarry Smith 82e884886fSBarry Smith if (nrm == 0.0) { 83e884886fSBarry Smith *zeroa = PETSC_TRUE; 84e884886fSBarry Smith PetscFunctionReturn(0); 85e884886fSBarry Smith } 86e884886fSBarry Smith *zeroa = PETSC_FALSE; 87e884886fSBarry Smith 88e884886fSBarry Smith /* 89e884886fSBarry Smith Safeguard for step sizes that are "too small" 90e884886fSBarry Smith */ 91e884886fSBarry Smith if (PetscAbsScalar(dot) < umin*sum && PetscRealPart(dot) >= 0.0) dot = umin*sum; 92e884886fSBarry Smith else if (PetscAbsScalar(dot) < 0.0 && PetscRealPart(dot) > -umin*sum) dot = -umin*sum; 93e884886fSBarry Smith *h = ctx->error_rel*dot/(nrm*nrm); 94*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(PetscIsInfOrNanScalar(*h),PETSC_COMM_SELF,PETSC_ERR_PLIB,"Differencing parameter is not a number sum = %g dot = %g norm = %g",(double)sum,(double)PetscRealPart(dot),(double)nrm); 95e884886fSBarry Smith } else { 96e884886fSBarry Smith *h = ctx->currenth; 97e884886fSBarry Smith } 98e884886fSBarry Smith ctx->count++; 99e884886fSBarry Smith PetscFunctionReturn(0); 100e884886fSBarry Smith } 101e884886fSBarry Smith 102e884886fSBarry Smith /* 103e884886fSBarry Smith MatMFFDView_DS - Prints information about this particular 104e884886fSBarry Smith method for computing h. Note that this does not print the general 105e884886fSBarry Smith information about the matrix-free method, as such info is printed 106e884886fSBarry Smith by the calling routine. 107e884886fSBarry Smith 108e884886fSBarry Smith Input Parameters: 109e884886fSBarry Smith + ctx - the matrix free context 110e884886fSBarry Smith - viewer - the PETSc viewer 111e884886fSBarry Smith */ 112e884886fSBarry Smith static PetscErrorCode MatMFFDView_DS(MatMFFD ctx,PetscViewer viewer) 113e884886fSBarry Smith { 114e884886fSBarry Smith MatMFFD_DS *hctx = (MatMFFD_DS*)ctx->hctx; 115e884886fSBarry Smith PetscErrorCode ierr; 116ace3abfcSBarry Smith PetscBool iascii; 117e884886fSBarry Smith 118e884886fSBarry Smith PetscFunctionBegin; 119e884886fSBarry Smith /* 120e884886fSBarry Smith Currently this only handles the ascii file viewers, others 121e884886fSBarry Smith could be added, but for this type of object other viewers 122e884886fSBarry Smith make less sense 123e884886fSBarry Smith */ 124251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 125e884886fSBarry Smith if (iascii) { 12657622a8eSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," umin=%g (minimum iterate parameter)\n",(double)hctx->umin);CHKERRQ(ierr); 127e884886fSBarry Smith } 128e884886fSBarry Smith PetscFunctionReturn(0); 129e884886fSBarry Smith } 130e884886fSBarry Smith 131e884886fSBarry Smith /* 132e884886fSBarry Smith MatMFFDSetFromOptions_DS - Looks in the options database for 133e884886fSBarry Smith any options appropriate for this method. 134e884886fSBarry Smith 135e884886fSBarry Smith Input Parameter: 136e884886fSBarry Smith . ctx - the matrix free context 137e884886fSBarry Smith 138e884886fSBarry Smith */ 1394416b707SBarry Smith static PetscErrorCode MatMFFDSetFromOptions_DS(PetscOptionItems *PetscOptionsObject,MatMFFD ctx) 140e884886fSBarry Smith { 141e884886fSBarry Smith PetscErrorCode ierr; 142e884886fSBarry Smith MatMFFD_DS *hctx = (MatMFFD_DS*)ctx->hctx; 143e884886fSBarry Smith 144e884886fSBarry Smith PetscFunctionBegin; 145e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"Finite difference matrix free parameters");CHKERRQ(ierr); 146f4259b30SLisandro Dalcin ierr = PetscOptionsReal("-mat_mffd_umin","umin","MatMFFDDSSetUmin",hctx->umin,&hctx->umin,NULL);CHKERRQ(ierr); 147e884886fSBarry Smith ierr = PetscOptionsTail();CHKERRQ(ierr); 148e884886fSBarry Smith PetscFunctionReturn(0); 149e884886fSBarry Smith } 150e884886fSBarry Smith 151e884886fSBarry Smith /* 152e884886fSBarry Smith MatMFFDDestroy_DS - Frees the space allocated by 1531d0fab5eSBarry Smith MatCreateMFFD_DS(). 154e884886fSBarry Smith 155e884886fSBarry Smith Input Parameter: 156e884886fSBarry Smith . ctx - the matrix free context 157e884886fSBarry Smith 158e884886fSBarry Smith Notes: 159e884886fSBarry Smith Does not free the ctx, that is handled by the calling routine 160e884886fSBarry Smith */ 161e884886fSBarry Smith static PetscErrorCode MatMFFDDestroy_DS(MatMFFD ctx) 162e884886fSBarry Smith { 163e884886fSBarry Smith PetscErrorCode ierr; 164e884886fSBarry Smith 165e884886fSBarry Smith PetscFunctionBegin; 166e884886fSBarry Smith ierr = PetscFree(ctx->hctx);CHKERRQ(ierr); 167e884886fSBarry Smith PetscFunctionReturn(0); 168e884886fSBarry Smith } 169e884886fSBarry Smith 170e884886fSBarry Smith /* 171e884886fSBarry Smith The following two routines use the PetscObjectCompose() and PetscObjectQuery() 172e884886fSBarry Smith mechanism to allow the user to change the Umin parameter used in this method. 173e884886fSBarry Smith */ 174304ddee0SJed Brown PetscErrorCode MatMFFDDSSetUmin_DS(Mat mat,PetscReal umin) 175e884886fSBarry Smith { 176440c47e6SSatish Balay MatMFFD ctx=NULL; 177e884886fSBarry Smith MatMFFD_DS *hctx; 178440c47e6SSatish Balay PetscErrorCode ierr; 179e884886fSBarry Smith 180e884886fSBarry Smith PetscFunctionBegin; 181440c47e6SSatish Balay ierr = MatShellGetContext(mat,&ctx);CHKERRQ(ierr); 182*2c71b3e2SJacob Faibussowitsch PetscCheckFalse(!ctx,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"MatMFFDDSSetUmin() attached to non-shell matrix"); 183e884886fSBarry Smith hctx = (MatMFFD_DS*)ctx->hctx; 184e884886fSBarry Smith hctx->umin = umin; 185e884886fSBarry Smith PetscFunctionReturn(0); 186e884886fSBarry Smith } 187e884886fSBarry Smith 188e884886fSBarry Smith /*@ 189e884886fSBarry Smith MatMFFDDSSetUmin - Sets the "umin" parameter used by the 190e884886fSBarry Smith PETSc routine for computing the differencing parameter, h, which is used 191e884886fSBarry Smith for matrix-free Jacobian-vector products. 192e884886fSBarry Smith 193e884886fSBarry Smith Input Parameters: 194e884886fSBarry Smith + A - the matrix created with MatCreateSNESMF() 195e884886fSBarry Smith - umin - the parameter 196e884886fSBarry Smith 197e884886fSBarry Smith Level: advanced 198e884886fSBarry Smith 199e884886fSBarry Smith Notes: 200e884886fSBarry Smith See the manual page for MatCreateSNESMF() for a complete description of the 201e884886fSBarry Smith algorithm used to compute h. 202e884886fSBarry Smith 203e884886fSBarry Smith .seealso: MatMFFDSetFunctionError(), MatCreateSNESMF() 204e884886fSBarry Smith 205e884886fSBarry Smith @*/ 2067087cfbeSBarry Smith PetscErrorCode MatMFFDDSSetUmin(Mat A,PetscReal umin) 207e884886fSBarry Smith { 2084ac538c5SBarry Smith PetscErrorCode ierr; 209e884886fSBarry Smith 210e884886fSBarry Smith PetscFunctionBegin; 2110700a824SBarry Smith PetscValidHeaderSpecific(A,MAT_CLASSID,1); 2124ac538c5SBarry Smith ierr = PetscTryMethod(A,"MatMFFDDSSetUmin_C",(Mat,PetscReal),(A,umin));CHKERRQ(ierr); 213e884886fSBarry Smith PetscFunctionReturn(0); 214e884886fSBarry Smith } 215e884886fSBarry Smith 216e884886fSBarry Smith /*MC 217e884886fSBarry Smith MATMFFD_DS - the code for compute the "h" used in the finite difference 218e884886fSBarry Smith matrix-free matrix vector product. This code 219e884886fSBarry Smith implements the strategy in Dennis and Schnabel, "Numerical Methods for Unconstrained 220e884886fSBarry Smith Optimization and Nonlinear Equations". 221e884886fSBarry Smith 222e884886fSBarry Smith Options Database Keys: 223e884886fSBarry Smith . -mat_mffd_umin <umin> see MatMFFDDSSetUmin() 224e884886fSBarry Smith 225e884886fSBarry Smith Level: intermediate 226e884886fSBarry Smith 22795452b02SPatrick Sanan Notes: 22895452b02SPatrick Sanan Requires 2 norms and 1 inner product, but they are computed together 229e884886fSBarry Smith so only one parallel collective operation is needed. See MATMFFD_WP for a method 230e884886fSBarry Smith (with GMRES) that requires NO collective operations. 231e884886fSBarry Smith 232e884886fSBarry Smith Formula used: 233e884886fSBarry Smith F'(u)*a = [F(u+h*a) - F(u)]/h where 234e884886fSBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 235e884886fSBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 otherwise 236e884886fSBarry Smith where 237e884886fSBarry Smith error_rel = square root of relative error in function evaluation 238e884886fSBarry Smith umin = minimum iterate parameter 239e884886fSBarry Smith 240e884886fSBarry Smith .seealso: MATMFFD, MatCreateMFFD(), MatCreateSNESMF(), MATMFFD_WP, MatMFFDDSSetUmin() 241e884886fSBarry Smith 242e884886fSBarry Smith M*/ 2438cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreateMFFD_DS(MatMFFD ctx) 244e884886fSBarry Smith { 245e884886fSBarry Smith MatMFFD_DS *hctx; 246e884886fSBarry Smith PetscErrorCode ierr; 247e884886fSBarry Smith 248e884886fSBarry Smith PetscFunctionBegin; 249e884886fSBarry Smith /* allocate my own private data structure */ 250b00a9115SJed Brown ierr = PetscNewLog(ctx,&hctx);CHKERRQ(ierr); 251e884886fSBarry Smith ctx->hctx = (void*)hctx; 252e884886fSBarry Smith /* set a default for my parameter */ 253e884886fSBarry Smith hctx->umin = 1.e-6; 254e884886fSBarry Smith 255e884886fSBarry Smith /* set the functions I am providing */ 256e884886fSBarry Smith ctx->ops->compute = MatMFFDCompute_DS; 257e884886fSBarry Smith ctx->ops->destroy = MatMFFDDestroy_DS; 258e884886fSBarry Smith ctx->ops->view = MatMFFDView_DS; 259e884886fSBarry Smith ctx->ops->setfromoptions = MatMFFDSetFromOptions_DS; 260e884886fSBarry Smith 261bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ctx->mat,"MatMFFDDSSetUmin_C",MatMFFDDSSetUmin_DS);CHKERRQ(ierr); 262e884886fSBarry Smith PetscFunctionReturn(0); 263e884886fSBarry Smith } 264e884886fSBarry Smith 265