1e884886fSBarry Smith 2e884886fSBarry Smith /* 3e884886fSBarry Smith Implements the DS PETSc approach for computing the h 4e884886fSBarry Smith parameter used with the finite difference based matrix-free 5e884886fSBarry Smith Jacobian-vector products. 6e884886fSBarry Smith 7e884886fSBarry Smith To make your own: clone this file and modify for your needs. 8e884886fSBarry Smith 9e884886fSBarry Smith Mandatory functions: 10e884886fSBarry Smith ------------------- 11e884886fSBarry Smith MatMFFDCompute_ - for a given point and direction computes h 12e884886fSBarry Smith 131d0fab5eSBarry Smith MatCreateMFFD _ - fills in the MatMFFD data structure 14e884886fSBarry Smith for this particular implementation 15e884886fSBarry Smith 16e884886fSBarry Smith 17e884886fSBarry Smith Optional functions: 18e884886fSBarry Smith ------------------- 19e884886fSBarry Smith MatMFFDView_ - prints information about the parameters being used. 20e884886fSBarry Smith This is called when SNESView() or -snes_view is used. 21e884886fSBarry Smith 22e884886fSBarry Smith MatMFFDSetFromOptions_ - checks the options database for options that 23e884886fSBarry Smith apply to this method. 24e884886fSBarry Smith 25e884886fSBarry Smith MatMFFDDestroy_ - frees any space allocated by the routines above 26e884886fSBarry Smith 27e884886fSBarry Smith */ 28e884886fSBarry Smith 29e884886fSBarry Smith /* 30e884886fSBarry Smith This include file defines the data structure MatMFFD that 31e884886fSBarry Smith includes information about the computation of h. It is shared by 32e884886fSBarry Smith all implementations that people provide 33e884886fSBarry Smith */ 34b45d2f2cSJed Brown #include <petsc-private/matimpl.h> 35c6db04a5SJed Brown #include <../src/mat/impls/mffd/mffdimpl.h> /*I "petscmat.h" I*/ 36e884886fSBarry Smith 37e884886fSBarry Smith /* 38e884886fSBarry Smith The method has one parameter that is used to 39e884886fSBarry Smith "cutoff" very small values. This is stored in a data structure 40e884886fSBarry Smith that is only visible to this file. If your method has no parameters 41e884886fSBarry Smith it can omit this, if it has several simply reorganize the data structure. 42e884886fSBarry Smith The data structure is "hung-off" the MatMFFD data structure in 43e884886fSBarry Smith the void *hctx; field. 44e884886fSBarry Smith */ 45e884886fSBarry Smith typedef struct { 46e884886fSBarry Smith PetscReal umin; /* minimum allowable u'a value relative to |u|_1 */ 47e884886fSBarry Smith } MatMFFD_DS; 48e884886fSBarry Smith 49e884886fSBarry Smith #undef __FUNCT__ 50e884886fSBarry Smith #define __FUNCT__ "MatMFFDCompute_DS" 51e884886fSBarry Smith /* 52e884886fSBarry Smith MatMFFDCompute_DS - Standard PETSc code for computing the 53e884886fSBarry Smith differencing paramter (h) for use with matrix-free finite differences. 54e884886fSBarry Smith 55e884886fSBarry Smith Input Parameters: 56e884886fSBarry Smith + ctx - the matrix free context 57e884886fSBarry Smith . U - the location at which you want the Jacobian 58e884886fSBarry Smith - a - the direction you want the derivative 59e884886fSBarry Smith 60e884886fSBarry Smith 61e884886fSBarry Smith Output Parameter: 62e884886fSBarry Smith . h - the scale computed 63e884886fSBarry Smith 64e884886fSBarry Smith */ 65ace3abfcSBarry Smith static PetscErrorCode MatMFFDCompute_DS(MatMFFD ctx,Vec U,Vec a,PetscScalar *h,PetscBool *zeroa) 66e884886fSBarry Smith { 67e884886fSBarry Smith MatMFFD_DS *hctx = (MatMFFD_DS*)ctx->hctx; 68e884886fSBarry Smith PetscReal nrm,sum,umin = hctx->umin; 69e884886fSBarry Smith PetscScalar dot; 70e884886fSBarry Smith PetscErrorCode ierr; 71e884886fSBarry Smith 72e884886fSBarry Smith PetscFunctionBegin; 73e884886fSBarry Smith if (!(ctx->count % ctx->recomputeperiod)) { 74e884886fSBarry Smith /* 75e884886fSBarry Smith This algorithm requires 2 norms and 1 inner product. Rather than 76e884886fSBarry Smith use directly the VecNorm() and VecDot() routines (and thus have 77e884886fSBarry Smith three separate collective operations, we use the VecxxxBegin/End() routines 78e884886fSBarry Smith */ 79e884886fSBarry Smith ierr = VecDotBegin(U,a,&dot);CHKERRQ(ierr); 80e884886fSBarry Smith ierr = VecNormBegin(a,NORM_1,&sum);CHKERRQ(ierr); 81e884886fSBarry Smith ierr = VecNormBegin(a,NORM_2,&nrm);CHKERRQ(ierr); 82e884886fSBarry Smith ierr = VecDotEnd(U,a,&dot);CHKERRQ(ierr); 83e884886fSBarry Smith ierr = VecNormEnd(a,NORM_1,&sum);CHKERRQ(ierr); 84e884886fSBarry Smith ierr = VecNormEnd(a,NORM_2,&nrm);CHKERRQ(ierr); 85e884886fSBarry Smith 86e884886fSBarry Smith if (nrm == 0.0) { 87e884886fSBarry Smith *zeroa = PETSC_TRUE; 88e884886fSBarry Smith PetscFunctionReturn(0); 89e884886fSBarry Smith } 90e884886fSBarry Smith *zeroa = PETSC_FALSE; 91e884886fSBarry Smith 92e884886fSBarry Smith /* 93e884886fSBarry Smith Safeguard for step sizes that are "too small" 94e884886fSBarry Smith */ 95e884886fSBarry Smith if (PetscAbsScalar(dot) < umin*sum && PetscRealPart(dot) >= 0.0) dot = umin*sum; 96e884886fSBarry Smith else if (PetscAbsScalar(dot) < 0.0 && PetscRealPart(dot) > -umin*sum) dot = -umin*sum; 97e884886fSBarry Smith *h = ctx->error_rel*dot/(nrm*nrm); 98e884886fSBarry Smith } else { 99e884886fSBarry Smith *h = ctx->currenth; 100e884886fSBarry Smith } 101e32f2f54SBarry Smith if (*h != *h) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Differencing parameter is not a number sum = %G dot = %G norm = %G",sum,PetscRealPart(dot),nrm); 102e884886fSBarry Smith ctx->count++; 103e884886fSBarry Smith PetscFunctionReturn(0); 104e884886fSBarry Smith } 105e884886fSBarry Smith 106e884886fSBarry Smith #undef __FUNCT__ 107e884886fSBarry Smith #define __FUNCT__ "MatMFFDView_DS" 108e884886fSBarry Smith /* 109e884886fSBarry Smith MatMFFDView_DS - Prints information about this particular 110e884886fSBarry Smith method for computing h. Note that this does not print the general 111e884886fSBarry Smith information about the matrix-free method, as such info is printed 112e884886fSBarry Smith by the calling routine. 113e884886fSBarry Smith 114e884886fSBarry Smith Input Parameters: 115e884886fSBarry Smith + ctx - the matrix free context 116e884886fSBarry Smith - viewer - the PETSc viewer 117e884886fSBarry Smith */ 118e884886fSBarry Smith static PetscErrorCode MatMFFDView_DS(MatMFFD ctx,PetscViewer viewer) 119e884886fSBarry Smith { 120e884886fSBarry Smith MatMFFD_DS *hctx = (MatMFFD_DS*)ctx->hctx; 121e884886fSBarry Smith PetscErrorCode ierr; 122ace3abfcSBarry Smith PetscBool iascii; 123e884886fSBarry Smith 124e884886fSBarry Smith PetscFunctionBegin; 125e884886fSBarry Smith /* 126e884886fSBarry Smith Currently this only handles the ascii file viewers, others 127e884886fSBarry Smith could be added, but for this type of object other viewers 128e884886fSBarry Smith make less sense 129e884886fSBarry Smith */ 130251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 131e884886fSBarry Smith if (iascii) { 132e884886fSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," umin=%G (minimum iterate parameter)\n",hctx->umin);CHKERRQ(ierr); 133e884886fSBarry Smith } 134e884886fSBarry Smith PetscFunctionReturn(0); 135e884886fSBarry Smith } 136e884886fSBarry Smith 137e884886fSBarry Smith #undef __FUNCT__ 138e884886fSBarry Smith #define __FUNCT__ "MatMFFDSetFromOptions_DS" 139e884886fSBarry Smith /* 140e884886fSBarry Smith MatMFFDSetFromOptions_DS - Looks in the options database for 141e884886fSBarry Smith any options appropriate for this method. 142e884886fSBarry Smith 143e884886fSBarry Smith Input Parameter: 144e884886fSBarry Smith . ctx - the matrix free context 145e884886fSBarry Smith 146e884886fSBarry Smith */ 147e884886fSBarry Smith static PetscErrorCode MatMFFDSetFromOptions_DS(MatMFFD ctx) 148e884886fSBarry Smith { 149e884886fSBarry Smith PetscErrorCode ierr; 150e884886fSBarry Smith MatMFFD_DS *hctx = (MatMFFD_DS*)ctx->hctx; 151e884886fSBarry Smith 152e884886fSBarry Smith PetscFunctionBegin; 153e884886fSBarry Smith ierr = PetscOptionsHead("Finite difference matrix free parameters");CHKERRQ(ierr); 154e884886fSBarry Smith ierr = PetscOptionsReal("-mat_mffd_umin","umin","MatMFFDDSSetUmin",hctx->umin,&hctx->umin,0);CHKERRQ(ierr); 155e884886fSBarry Smith ierr = PetscOptionsTail();CHKERRQ(ierr); 156e884886fSBarry Smith PetscFunctionReturn(0); 157e884886fSBarry Smith } 158e884886fSBarry Smith 159e884886fSBarry Smith #undef __FUNCT__ 160e884886fSBarry Smith #define __FUNCT__ "MatMFFDDestroy_DS" 161e884886fSBarry Smith /* 162e884886fSBarry Smith MatMFFDDestroy_DS - Frees the space allocated by 1631d0fab5eSBarry Smith MatCreateMFFD_DS(). 164e884886fSBarry Smith 165e884886fSBarry Smith Input Parameter: 166e884886fSBarry Smith . ctx - the matrix free context 167e884886fSBarry Smith 168e884886fSBarry Smith Notes: 169e884886fSBarry Smith Does not free the ctx, that is handled by the calling routine 170e884886fSBarry Smith */ 171e884886fSBarry Smith static PetscErrorCode MatMFFDDestroy_DS(MatMFFD ctx) 172e884886fSBarry Smith { 173e884886fSBarry Smith PetscErrorCode ierr; 174e884886fSBarry Smith 175e884886fSBarry Smith PetscFunctionBegin; 176e884886fSBarry Smith ierr = PetscFree(ctx->hctx);CHKERRQ(ierr); 177e884886fSBarry Smith PetscFunctionReturn(0); 178e884886fSBarry Smith } 179e884886fSBarry Smith 180e884886fSBarry Smith #undef __FUNCT__ 181304ddee0SJed Brown #define __FUNCT__ "MatMFFDDSSetUmin_DS" 182e884886fSBarry Smith /* 183e884886fSBarry Smith The following two routines use the PetscObjectCompose() and PetscObjectQuery() 184e884886fSBarry Smith mechanism to allow the user to change the Umin parameter used in this method. 185e884886fSBarry Smith */ 186304ddee0SJed Brown PetscErrorCode MatMFFDDSSetUmin_DS(Mat mat,PetscReal umin) 187e884886fSBarry Smith { 188e884886fSBarry Smith MatMFFD ctx = (MatMFFD)mat->data; 189e884886fSBarry Smith MatMFFD_DS *hctx; 190e884886fSBarry Smith 191e884886fSBarry Smith PetscFunctionBegin; 192e7e72b3dSBarry Smith if (!ctx) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"MatMFFDDSSetUmin() attached to non-shell matrix"); 193e884886fSBarry Smith hctx = (MatMFFD_DS*)ctx->hctx; 194e884886fSBarry Smith hctx->umin = umin; 195e884886fSBarry Smith PetscFunctionReturn(0); 196e884886fSBarry Smith } 197e884886fSBarry Smith 198e884886fSBarry Smith #undef __FUNCT__ 199e884886fSBarry Smith #define __FUNCT__ "MatMFFDDSSetUmin" 200e884886fSBarry Smith /*@ 201e884886fSBarry Smith MatMFFDDSSetUmin - Sets the "umin" parameter used by the 202e884886fSBarry Smith PETSc routine for computing the differencing parameter, h, which is used 203e884886fSBarry Smith for matrix-free Jacobian-vector products. 204e884886fSBarry Smith 205e884886fSBarry Smith Input Parameters: 206e884886fSBarry Smith + A - the matrix created with MatCreateSNESMF() 207e884886fSBarry Smith - umin - the parameter 208e884886fSBarry Smith 209e884886fSBarry Smith Level: advanced 210e884886fSBarry Smith 211e884886fSBarry Smith Notes: 212e884886fSBarry Smith See the manual page for MatCreateSNESMF() for a complete description of the 213e884886fSBarry Smith algorithm used to compute h. 214e884886fSBarry Smith 215e884886fSBarry Smith .seealso: MatMFFDSetFunctionError(), MatCreateSNESMF() 216e884886fSBarry Smith 217e884886fSBarry Smith @*/ 2187087cfbeSBarry Smith PetscErrorCode MatMFFDDSSetUmin(Mat A,PetscReal umin) 219e884886fSBarry Smith { 2204ac538c5SBarry Smith PetscErrorCode ierr; 221e884886fSBarry Smith 222e884886fSBarry Smith PetscFunctionBegin; 2230700a824SBarry Smith PetscValidHeaderSpecific(A,MAT_CLASSID,1); 2244ac538c5SBarry Smith ierr = PetscTryMethod(A,"MatMFFDDSSetUmin_C",(Mat,PetscReal),(A,umin));CHKERRQ(ierr); 225e884886fSBarry Smith PetscFunctionReturn(0); 226e884886fSBarry Smith } 227e884886fSBarry Smith 228e884886fSBarry Smith /*MC 229e884886fSBarry Smith MATMFFD_DS - the code for compute the "h" used in the finite difference 230e884886fSBarry Smith matrix-free matrix vector product. This code 231e884886fSBarry Smith implements the strategy in Dennis and Schnabel, "Numerical Methods for Unconstrained 232e884886fSBarry Smith Optimization and Nonlinear Equations". 233e884886fSBarry Smith 234e884886fSBarry Smith Options Database Keys: 235e884886fSBarry Smith . -mat_mffd_umin <umin> see MatMFFDDSSetUmin() 236e884886fSBarry Smith 237e884886fSBarry Smith Level: intermediate 238e884886fSBarry Smith 239e884886fSBarry Smith Notes: Requires 2 norms and 1 inner product, but they are computed together 240e884886fSBarry Smith so only one parallel collective operation is needed. See MATMFFD_WP for a method 241e884886fSBarry Smith (with GMRES) that requires NO collective operations. 242e884886fSBarry Smith 243e884886fSBarry Smith Formula used: 244e884886fSBarry Smith F'(u)*a = [F(u+h*a) - F(u)]/h where 245e884886fSBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 246e884886fSBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 otherwise 247e884886fSBarry Smith where 248e884886fSBarry Smith error_rel = square root of relative error in function evaluation 249e884886fSBarry Smith umin = minimum iterate parameter 250e884886fSBarry Smith 251e884886fSBarry Smith .seealso: MATMFFD, MatCreateMFFD(), MatCreateSNESMF(), MATMFFD_WP, MatMFFDDSSetUmin() 252e884886fSBarry Smith 253e884886fSBarry Smith M*/ 254e884886fSBarry Smith #undef __FUNCT__ 2551d0fab5eSBarry Smith #define __FUNCT__ "MatCreateMFFD_DS" 256*8cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreateMFFD_DS(MatMFFD ctx) 257e884886fSBarry Smith { 258e884886fSBarry Smith MatMFFD_DS *hctx; 259e884886fSBarry Smith PetscErrorCode ierr; 260e884886fSBarry Smith 261e884886fSBarry Smith PetscFunctionBegin; 262e884886fSBarry Smith /* allocate my own private data structure */ 26338f2d2fdSLisandro Dalcin ierr = PetscNewLog(ctx,MatMFFD_DS,&hctx);CHKERRQ(ierr); 264e884886fSBarry Smith ctx->hctx = (void*)hctx; 265e884886fSBarry Smith /* set a default for my parameter */ 266e884886fSBarry Smith hctx->umin = 1.e-6; 267e884886fSBarry Smith 268e884886fSBarry Smith /* set the functions I am providing */ 269e884886fSBarry Smith ctx->ops->compute = MatMFFDCompute_DS; 270e884886fSBarry Smith ctx->ops->destroy = MatMFFDDestroy_DS; 271e884886fSBarry Smith ctx->ops->view = MatMFFDView_DS; 272e884886fSBarry Smith ctx->ops->setfromoptions = MatMFFDSetFromOptions_DS; 273e884886fSBarry Smith 27400de8ff0SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ctx->mat,"MatMFFDDSSetUmin_C","MatMFFDDSSetUmin_DS",MatMFFDDSSetUmin_DS);CHKERRQ(ierr); 275e884886fSBarry Smith PetscFunctionReturn(0); 276e884886fSBarry Smith } 277e884886fSBarry Smith 278e884886fSBarry Smith 279e884886fSBarry Smith 280e884886fSBarry Smith 281e884886fSBarry Smith 282e884886fSBarry Smith 283e884886fSBarry Smith 284