xref: /petsc/src/mat/impls/sbaij/mpi/mpiaijsbaij.c (revision b94d7ded0a05f1bbd5e48daa6f92b28259c75b44)

#include <../src/mat/impls/sbaij/mpi/mpisbaij.h> /*I "petscmat.h" I*/
#include <../src/mat/impls/aij/mpi/mpiaij.h>
#include <petsc/private/matimpl.h>
#include <petscmat.h>

PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPISBAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
{
  Mat               M;
  Mat_MPIAIJ        *mpimat = (Mat_MPIAIJ*)A->data;
  Mat_SeqAIJ        *Aa     = (Mat_SeqAIJ*)mpimat->A->data,*Ba = (Mat_SeqAIJ*)mpimat->B->data;
  PetscInt          *d_nnz,*o_nnz;
  PetscInt          i,j,nz;
  PetscInt          m,n,lm,ln;
  PetscInt          rstart,rend,bs=PetscAbs(A->rmap->bs);
  const PetscScalar *vwork;
  const PetscInt    *cwork;

  PetscFunctionBegin;
  PetscCheck(A->symmetric == PETSC_BOOL3_TRUE || A->hermitian == PETSC_BOOL3_TRUE,PetscObjectComm((PetscObject)A),PETSC_ERR_USER,"Matrix must be symmetric or Hermitian. Call MatSetOption(mat,MAT_SYMMETRIC,PETSC_TRUE) or MatSetOption(mat,MAT_HERMITIAN,PETSC_TRUE)");
  if (reuse != MAT_REUSE_MATRIX) {
    PetscCall(MatGetSize(A,&m,&n));
    PetscCall(MatGetLocalSize(A,&lm,&ln));
    PetscCall(PetscMalloc2(lm/bs,&d_nnz,lm/bs,&o_nnz));

    PetscCall(MatMarkDiagonal_SeqAIJ(mpimat->A));
    for (i=0; i<lm/bs; i++) {
      if (Aa->i[i*bs+1] == Aa->diag[i*bs]) { /* misses diagonal entry */
        d_nnz[i] = (Aa->i[i*bs+1] - Aa->i[i*bs])/bs;
      } else {
        d_nnz[i] = (Aa->i[i*bs+1] - Aa->diag[i*bs])/bs;
      }
      o_nnz[i] = (Ba->i[i*bs+1] - Ba->i[i*bs])/bs;
    }

    PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&M));
    PetscCall(MatSetSizes(M,lm,ln,m,n));
    PetscCall(MatSetType(M,MATMPISBAIJ));
    PetscCall(MatSeqSBAIJSetPreallocation(M,bs,0,d_nnz));
    PetscCall(MatMPISBAIJSetPreallocation(M,bs,0,d_nnz,0,o_nnz));
    PetscCall(PetscFree2(d_nnz,o_nnz));
  } else M = *newmat;

  if (bs == 1) {
    PetscCall(MatGetOwnershipRange(A,&rstart,&rend));
    for (i=rstart; i<rend; i++) {
      PetscCall(MatGetRow(A,i,&nz,&cwork,&vwork));
      if (nz) {
        j = 0;
        while (cwork[j] < i) {
          j++; nz--;
        }
        PetscCall(MatSetValues(M,1,&i,nz,cwork+j,vwork+j,INSERT_VALUES));
      }
      PetscCall(MatRestoreRow(A,i,&nz,&cwork,&vwork));
    }
    PetscCall(MatAssemblyBegin(M,MAT_FINAL_ASSEMBLY));
    PetscCall(MatAssemblyEnd(M,MAT_FINAL_ASSEMBLY));
  } else {
    PetscCall(MatSetOption(M,MAT_IGNORE_LOWER_TRIANGULAR,PETSC_TRUE));
    /* reuse may not be equal to MAT_REUSE_MATRIX, but the basic converter will reallocate or replace newmat if this value is not used */
    /* if reuse is equal to MAT_INITIAL_MATRIX, it has been appropriately preallocated before                                          */
    /*                      MAT_INPLACE_MATRIX, it will be replaced with MatHeaderReplace below                                        */
    PetscCall(MatConvert_Basic(A,newtype,MAT_REUSE_MATRIX,&M));
  }

  if (reuse == MAT_INPLACE_MATRIX) {
    PetscCall(MatHeaderReplace(A,&M));
  } else *newmat = M;
  PetscFunctionReturn(0);
}
/* contributed by Dahai Guo <dhguo@ncsa.uiuc.edu> April 2011 */
PETSC_INTERN PetscErrorCode MatConvert_MPIBAIJ_MPISBAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
{
  Mat               M;
  Mat_MPIBAIJ       *mpimat = (Mat_MPIBAIJ*)A->data;
  Mat_SeqBAIJ       *Aa     = (Mat_SeqBAIJ*)mpimat->A->data,*Ba = (Mat_SeqBAIJ*)mpimat->B->data;
  PetscInt          *d_nnz,*o_nnz;
  PetscInt          i,nz;
  PetscInt          m,n,lm,ln;
  PetscInt          rstart,rend;
  const PetscScalar *vwork;
  const PetscInt    *cwork;
  PetscInt          bs = A->rmap->bs;

  PetscFunctionBegin;
  if (reuse != MAT_REUSE_MATRIX) {
    PetscCall(MatGetSize(A,&m,&n));
    PetscCall(MatGetLocalSize(A,&lm,&ln));
    PetscCall(PetscMalloc2(lm/bs,&d_nnz,lm/bs,&o_nnz));

    PetscCall(MatMarkDiagonal_SeqBAIJ(mpimat->A));
    for (i=0; i<lm/bs; i++) {
      d_nnz[i] = Aa->i[i+1] - Aa->diag[i];
      o_nnz[i] = Ba->i[i+1] - Ba->i[i];
    }

    PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&M));
    PetscCall(MatSetSizes(M,lm,ln,m,n));
    PetscCall(MatSetType(M,MATMPISBAIJ));
    PetscCall(MatSeqSBAIJSetPreallocation(M,bs,0,d_nnz));
    PetscCall(MatMPISBAIJSetPreallocation(M,bs,0,d_nnz,0,o_nnz));

    PetscCall(PetscFree2(d_nnz,o_nnz));
  } else M = *newmat;

  PetscCall(MatGetOwnershipRange(A,&rstart,&rend));
  PetscCall(MatSetOption(M,MAT_IGNORE_LOWER_TRIANGULAR,PETSC_TRUE));
  for (i=rstart; i<rend; i++) {
    PetscCall(MatGetRow(A,i,&nz,&cwork,&vwork));
    PetscCall(MatSetValues(M,1,&i,nz,cwork,vwork,INSERT_VALUES));
    PetscCall(MatRestoreRow(A,i,&nz,&cwork,&vwork));
  }
  PetscCall(MatAssemblyBegin(M,MAT_FINAL_ASSEMBLY));
  PetscCall(MatAssemblyEnd(M,MAT_FINAL_ASSEMBLY));

  if (reuse == MAT_INPLACE_MATRIX) {
    PetscCall(MatHeaderReplace(A,&M));
  } else *newmat = M;
  PetscFunctionReturn(0);
}