xref: /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c (revision 29bbc08cd5461c366aba6645924e8ff42acd1de0)
1*29bbc08cSBarry Smith /*$Id: mpisbaij.c,v 1.23 2000/09/27 21:14:30 balay Exp bsmith $*/
2a30f8f8cSSatish Balay 
3c8117e22SSatish Balay #include "src/mat/impls/baij/mpi/mpibaij.h"    /*I "petscmat.h" I*/
4a30f8f8cSSatish Balay #include "src/vec/vecimpl.h"
5a30f8f8cSSatish Balay #include "mpisbaij.h"
6a30f8f8cSSatish Balay #include "src/mat/impls/sbaij/seq/sbaij.h"
7a30f8f8cSSatish Balay 
8a30f8f8cSSatish Balay extern int MatSetUpMultiply_MPISBAIJ(Mat);
9a30f8f8cSSatish Balay extern int DisAssemble_MPISBAIJ(Mat);
10a30f8f8cSSatish Balay extern int MatIncreaseOverlap_MPISBAIJ(Mat,int,IS *,int);
11a30f8f8cSSatish Balay extern int MatGetSubMatrices_MPISBAIJ(Mat,int,IS *,IS *,MatReuse,Mat **);
12a30f8f8cSSatish Balay extern int MatGetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *);
13a30f8f8cSSatish Balay extern int MatSetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *,InsertMode);
14a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ(Mat,int,int*,int,int*,Scalar*,InsertMode);
15a30f8f8cSSatish Balay extern int MatGetRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
16a30f8f8cSSatish Balay extern int MatRestoreRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
17a30f8f8cSSatish Balay extern int MatPrintHelp_SeqSBAIJ(Mat);
18a30f8f8cSSatish Balay extern int MatZeroRows_SeqSBAIJ(Mat,IS,Scalar*);
1900319c27SSatish Balay extern int MatZeroRows_SeqBAIJ(Mat,IS,Scalar *);
20a30f8f8cSSatish Balay 
21a30f8f8cSSatish Balay /*  UGLY, ugly, ugly
22a30f8f8cSSatish Balay    When MatScalar == Scalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
23a30f8f8cSSatish Balay    not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
24a30f8f8cSSatish Balay    inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
25a30f8f8cSSatish Balay    converts the entries into single precision and then calls ..._MatScalar() to put them
26a30f8f8cSSatish Balay    into the single precision data structures.
27a30f8f8cSSatish Balay */
28a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
29a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
30a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
31a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
32a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
33a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
34a30f8f8cSSatish Balay #else
35a30f8f8cSSatish Balay #define MatSetValuesBlocked_SeqSBAIJ_MatScalar      MatSetValuesBlocked_SeqSBAIJ
36a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_MatScalar             MatSetValues_MPISBAIJ
37a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_MatScalar      MatSetValuesBlocked_MPISBAIJ
38a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_HT_MatScalar          MatSetValues_MPISBAIJ_HT
39a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_HT_MatScalar   MatSetValuesBlocked_MPISBAIJ_HT
40a30f8f8cSSatish Balay #endif
41a30f8f8cSSatish Balay 
42a30f8f8cSSatish Balay EXTERN_C_BEGIN
43a30f8f8cSSatish Balay #undef __FUNC__
44f3566a2aSHong Zhang #define __FUNC__ /*<a name="MatStoreValues_MPISBAIJ"></a>*/"MatStoreValues_MPISBAIJ"
45a30f8f8cSSatish Balay int MatStoreValues_MPISBAIJ(Mat mat)
46a30f8f8cSSatish Balay {
47f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
48a30f8f8cSSatish Balay   int         ierr;
49a30f8f8cSSatish Balay 
50a30f8f8cSSatish Balay   PetscFunctionBegin;
51a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
52a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
53a30f8f8cSSatish Balay   PetscFunctionReturn(0);
54a30f8f8cSSatish Balay }
55a30f8f8cSSatish Balay EXTERN_C_END
56a30f8f8cSSatish Balay 
57a30f8f8cSSatish Balay EXTERN_C_BEGIN
58a30f8f8cSSatish Balay #undef __FUNC__
59f3566a2aSHong Zhang #define __FUNC__ /*<a name="MatRetrieveValues_MPISBAIJ"></a>*/"MatRetrieveValues_MPISBAIJ"
60a30f8f8cSSatish Balay int MatRetrieveValues_MPISBAIJ(Mat mat)
61a30f8f8cSSatish Balay {
62f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
63a30f8f8cSSatish Balay   int         ierr;
64a30f8f8cSSatish Balay 
65a30f8f8cSSatish Balay   PetscFunctionBegin;
66a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
67a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
68a30f8f8cSSatish Balay   PetscFunctionReturn(0);
69a30f8f8cSSatish Balay }
70a30f8f8cSSatish Balay EXTERN_C_END
71a30f8f8cSSatish Balay 
72a30f8f8cSSatish Balay /*
73a30f8f8cSSatish Balay      Local utility routine that creates a mapping from the global column
74a30f8f8cSSatish Balay    number to the local number in the off-diagonal part of the local
75a30f8f8cSSatish Balay    storage of the matrix.  This is done in a non scable way since the
76a30f8f8cSSatish Balay    length of colmap equals the global matrix length.
77a30f8f8cSSatish Balay */
78a30f8f8cSSatish Balay #undef __FUNC__
79a30f8f8cSSatish Balay #define __FUNC__ /*<a name="CreateColmap_MPISBAIJ_Private"></a>*/"CreateColmap_MPISBAIJ_Private"
80a30f8f8cSSatish Balay static int CreateColmap_MPISBAIJ_Private(Mat mat)
81a30f8f8cSSatish Balay {
82a30f8f8cSSatish Balay   PetscFunctionBegin;
83*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
8496e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
85a30f8f8cSSatish Balay }
86a30f8f8cSSatish Balay 
87a30f8f8cSSatish Balay #define CHUNKSIZE  10
88a30f8f8cSSatish Balay 
89a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv) \
90a30f8f8cSSatish Balay { \
91a30f8f8cSSatish Balay  \
92a30f8f8cSSatish Balay     brow = row/bs;  \
93a30f8f8cSSatish Balay     rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
94a30f8f8cSSatish Balay     rmax = aimax[brow]; nrow = ailen[brow]; \
95a30f8f8cSSatish Balay       bcol = col/bs; \
96a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
97a30f8f8cSSatish Balay       low = 0; high = nrow; \
98a30f8f8cSSatish Balay       while (high-low > 3) { \
99a30f8f8cSSatish Balay         t = (low+high)/2; \
100a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
101a30f8f8cSSatish Balay         else              low  = t; \
102a30f8f8cSSatish Balay       } \
103a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
104a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
105a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
106a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
107a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
108a30f8f8cSSatish Balay           else                    *bap  = value;  \
109a30f8f8cSSatish Balay           goto a_noinsert; \
110a30f8f8cSSatish Balay         } \
111a30f8f8cSSatish Balay       } \
112a30f8f8cSSatish Balay       if (a->nonew == 1) goto a_noinsert; \
113*29bbc08cSBarry Smith       else if (a->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
114a30f8f8cSSatish Balay       if (nrow >= rmax) { \
115a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
116a30f8f8cSSatish Balay         int       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
117a30f8f8cSSatish Balay         MatScalar *new_a; \
118a30f8f8cSSatish Balay  \
119*29bbc08cSBarry Smith         if (a->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
120a30f8f8cSSatish Balay  \
121a30f8f8cSSatish Balay         /* malloc new storage space */ \
122a30f8f8cSSatish Balay         len     = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(int); \
123a30f8f8cSSatish Balay         new_a   = (MatScalar*)PetscMalloc(len);CHKPTRQ(new_a); \
124a30f8f8cSSatish Balay         new_j   = (int*)(new_a + bs2*new_nz); \
125a30f8f8cSSatish Balay         new_i   = new_j + new_nz; \
126a30f8f8cSSatish Balay  \
127a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
128a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
129a30f8f8cSSatish Balay         for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
130a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
131a30f8f8cSSatish Balay         len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
132a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
133a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
134a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(Scalar));CHKERRQ(ierr); \
135a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
136a30f8f8cSSatish Balay                     aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
137a30f8f8cSSatish Balay         /* free up old matrix storage */ \
138a30f8f8cSSatish Balay         ierr = PetscFree(a->a);CHKERRQ(ierr);  \
139a30f8f8cSSatish Balay         if (!a->singlemalloc) { \
140a30f8f8cSSatish Balay           ierr = PetscFree(a->i);CHKERRQ(ierr); \
141a30f8f8cSSatish Balay           ierr = PetscFree(a->j);CHKERRQ(ierr);\
142a30f8f8cSSatish Balay         } \
143a30f8f8cSSatish Balay         aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
144a30f8f8cSSatish Balay         a->singlemalloc = PETSC_TRUE; \
145a30f8f8cSSatish Balay  \
146a30f8f8cSSatish Balay         rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
147a30f8f8cSSatish Balay         rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
148a30f8f8cSSatish Balay         PLogObjectMemory(A,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
149a30f8f8cSSatish Balay         a->s_maxnz += bs2*CHUNKSIZE; \
150a30f8f8cSSatish Balay         a->reallocs++; \
151a30f8f8cSSatish Balay         a->s_nz++; \
152a30f8f8cSSatish Balay       } \
153a30f8f8cSSatish Balay       N = nrow++ - 1;  \
154a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
155a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
156a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
157a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
158a30f8f8cSSatish Balay       } \
159a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
160a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
161a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
162a30f8f8cSSatish Balay       a_noinsert:; \
163a30f8f8cSSatish Balay     ailen[brow] = nrow; \
164a30f8f8cSSatish Balay }
165a30f8f8cSSatish Balay #ifndef MatSetValues_SeqBAIJ_B_Private
166a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv) \
167a30f8f8cSSatish Balay { \
168a30f8f8cSSatish Balay     brow = row/bs;  \
169a30f8f8cSSatish Balay     rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
170a30f8f8cSSatish Balay     rmax = bimax[brow]; nrow = bilen[brow]; \
171a30f8f8cSSatish Balay       bcol = col/bs; \
172a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
173a30f8f8cSSatish Balay       low = 0; high = nrow; \
174a30f8f8cSSatish Balay       while (high-low > 3) { \
175a30f8f8cSSatish Balay         t = (low+high)/2; \
176a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
177a30f8f8cSSatish Balay         else              low  = t; \
178a30f8f8cSSatish Balay       } \
179a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
180a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
181a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
182a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
183a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
184a30f8f8cSSatish Balay           else                    *bap  = value;  \
185a30f8f8cSSatish Balay           goto b_noinsert; \
186a30f8f8cSSatish Balay         } \
187a30f8f8cSSatish Balay       } \
188a30f8f8cSSatish Balay       if (b->nonew == 1) goto b_noinsert; \
189*29bbc08cSBarry Smith       else if (b->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
190a30f8f8cSSatish Balay       if (nrow >= rmax) { \
191a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
192a30f8f8cSSatish Balay         int       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
193a30f8f8cSSatish Balay         MatScalar *new_a; \
194a30f8f8cSSatish Balay  \
195*29bbc08cSBarry Smith         if (b->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
196a30f8f8cSSatish Balay  \
197a30f8f8cSSatish Balay         /* malloc new storage space */ \
198a30f8f8cSSatish Balay         len     = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(int); \
199a30f8f8cSSatish Balay         new_a   = (MatScalar*)PetscMalloc(len);CHKPTRQ(new_a); \
200a30f8f8cSSatish Balay         new_j   = (int*)(new_a + bs2*new_nz); \
201a30f8f8cSSatish Balay         new_i   = new_j + new_nz; \
202a30f8f8cSSatish Balay  \
203a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
204a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
205a30f8f8cSSatish Balay         for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
206a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
207a30f8f8cSSatish Balay         len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
208a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
209a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
210a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
211a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
212a30f8f8cSSatish Balay                     ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
213a30f8f8cSSatish Balay         /* free up old matrix storage */ \
214a30f8f8cSSatish Balay         ierr = PetscFree(b->a);CHKERRQ(ierr);  \
215a30f8f8cSSatish Balay         if (!b->singlemalloc) { \
216a30f8f8cSSatish Balay           ierr = PetscFree(b->i);CHKERRQ(ierr); \
217a30f8f8cSSatish Balay           ierr = PetscFree(b->j);CHKERRQ(ierr); \
218a30f8f8cSSatish Balay         } \
219a30f8f8cSSatish Balay         ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
220a30f8f8cSSatish Balay         b->singlemalloc = PETSC_TRUE; \
221a30f8f8cSSatish Balay  \
222a30f8f8cSSatish Balay         rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
223a30f8f8cSSatish Balay         rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
224a30f8f8cSSatish Balay         PLogObjectMemory(B,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
225a30f8f8cSSatish Balay         b->maxnz += bs2*CHUNKSIZE; \
226a30f8f8cSSatish Balay         b->reallocs++; \
227a30f8f8cSSatish Balay         b->nz++; \
228a30f8f8cSSatish Balay       } \
229a30f8f8cSSatish Balay       N = nrow++ - 1;  \
230a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
231a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
232a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
233a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
234a30f8f8cSSatish Balay       } \
235a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
236a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
237a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
238a30f8f8cSSatish Balay       b_noinsert:; \
239a30f8f8cSSatish Balay     bilen[brow] = nrow; \
240a30f8f8cSSatish Balay }
241a30f8f8cSSatish Balay #endif
242a30f8f8cSSatish Balay 
243a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
244a30f8f8cSSatish Balay #undef __FUNC__
245a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPISBAIJ"></a>*/"MatSetValues_MPISBAIJ"
246a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
247a30f8f8cSSatish Balay {
248a30f8f8cSSatish Balay   Mat_MPISBAIJ *b = (Mat_MPISBAIJ*)mat->data;
249a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
250a30f8f8cSSatish Balay   MatScalar   *vsingle;
251a30f8f8cSSatish Balay 
252a30f8f8cSSatish Balay   PetscFunctionBegin;
253a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
254a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
255a30f8f8cSSatish Balay     b->setvaluescopy = (MatScalar*)PetscMalloc(N*sizeof(MatScalar));CHKPTRQ(b->setvaluescopy);
256a30f8f8cSSatish Balay     b->setvalueslen  = N;
257a30f8f8cSSatish Balay   }
258a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
259a30f8f8cSSatish Balay 
260a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
261a30f8f8cSSatish Balay     vsingle[i] = v[i];
262a30f8f8cSSatish Balay   }
263a30f8f8cSSatish Balay   ierr = MatSetValues_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
264a30f8f8cSSatish Balay   PetscFunctionReturn(0);
265a30f8f8cSSatish Balay }
266a30f8f8cSSatish Balay 
267a30f8f8cSSatish Balay #undef __FUNC__
268a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValuesBlocked_MPISBAIJ"></a>*/"MatSetValuesBlocked_MPISBAIJ"
269a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
270a30f8f8cSSatish Balay {
271a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
272a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
273a30f8f8cSSatish Balay   MatScalar   *vsingle;
274a30f8f8cSSatish Balay 
275a30f8f8cSSatish Balay   PetscFunctionBegin;
276a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
277a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
278a30f8f8cSSatish Balay     b->setvaluescopy = (MatScalar*)PetscMalloc(N*sizeof(MatScalar));CHKPTRQ(b->setvaluescopy);
279a30f8f8cSSatish Balay     b->setvalueslen  = N;
280a30f8f8cSSatish Balay   }
281a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
282a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
283a30f8f8cSSatish Balay     vsingle[i] = v[i];
284a30f8f8cSSatish Balay   }
285a30f8f8cSSatish Balay   ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
286a30f8f8cSSatish Balay   PetscFunctionReturn(0);
287a30f8f8cSSatish Balay }
288a30f8f8cSSatish Balay 
289a30f8f8cSSatish Balay #undef __FUNC__
290a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPISBAIJ_HT"></a>*/"MatSetValues_MPISBAIJ_HT"
291a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
292a30f8f8cSSatish Balay {
293a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
294a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
295a30f8f8cSSatish Balay   MatScalar   *vsingle;
296a30f8f8cSSatish Balay 
297a30f8f8cSSatish Balay   PetscFunctionBegin;
298*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
2994d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
300a30f8f8cSSatish Balay }
301a30f8f8cSSatish Balay 
302a30f8f8cSSatish Balay #undef __FUNC__
303a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValuesBlocked_MPISBAIJ_HT"></a>*/"MatSetValuesBlocked_MPISBAIJ_HT"
304a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
305a30f8f8cSSatish Balay {
306a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
307a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
308a30f8f8cSSatish Balay   MatScalar   *vsingle;
309a30f8f8cSSatish Balay 
310a30f8f8cSSatish Balay   PetscFunctionBegin;
311*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3124d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
313a30f8f8cSSatish Balay }
314a30f8f8cSSatish Balay #endif
315a30f8f8cSSatish Balay 
316a30f8f8cSSatish Balay /* Only add/insert a(i,j) with i<=j (blocks).
317a30f8f8cSSatish Balay    Any a(i,j) with i>j input by user is ingored.
318a30f8f8cSSatish Balay */
319a30f8f8cSSatish Balay #undef __FUNC__
320a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPIBAIJ"></a>*/"MatSetValues_MPIBAIJ"
321a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
322a30f8f8cSSatish Balay {
323a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
324a30f8f8cSSatish Balay   MatScalar   value;
325a30f8f8cSSatish Balay   int         ierr,i,j,row,col;
326a30f8f8cSSatish Balay   int         roworiented = baij->roworiented,rstart_orig=baij->rstart_bs ;
327a30f8f8cSSatish Balay   int         rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
328a30f8f8cSSatish Balay   int         cend_orig=baij->cend_bs,bs=baij->bs;
329a30f8f8cSSatish Balay 
330a30f8f8cSSatish Balay   /* Some Variables required in the macro */
331a30f8f8cSSatish Balay   Mat         A = baij->A;
332a30f8f8cSSatish Balay   Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)(A)->data;
333a30f8f8cSSatish Balay   int         *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
334a30f8f8cSSatish Balay   MatScalar   *aa=a->a;
335a30f8f8cSSatish Balay 
336a30f8f8cSSatish Balay   Mat         B = baij->B;
337a30f8f8cSSatish Balay   Mat_SeqBAIJ *b = (Mat_SeqBAIJ*)(B)->data;
338a30f8f8cSSatish Balay   int         *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
339a30f8f8cSSatish Balay   MatScalar   *ba=b->a;
340a30f8f8cSSatish Balay 
341a30f8f8cSSatish Balay   int         *rp,ii,nrow,_i,rmax,N,brow,bcol;
342a30f8f8cSSatish Balay   int         low,high,t,ridx,cidx,bs2=a->bs2;
343a30f8f8cSSatish Balay   MatScalar   *ap,*bap;
344a30f8f8cSSatish Balay 
345a30f8f8cSSatish Balay   /* for stash */
346f65c83cfSHong Zhang   int         n_loc, *in_loc=0;
347f65c83cfSHong Zhang   MatScalar   *v_loc=0;
348a30f8f8cSSatish Balay 
349a30f8f8cSSatish Balay   PetscFunctionBegin;
350a30f8f8cSSatish Balay 
351a30f8f8cSSatish Balay   if(!baij->donotstash){
352a30f8f8cSSatish Balay     in_loc = (int*)PetscMalloc(n*sizeof(int));CHKPTRQ(in_loc);
353a30f8f8cSSatish Balay     v_loc  = (MatScalar*)PetscMalloc(n*sizeof(MatScalar));CHKPTRQ(v_loc);
354a30f8f8cSSatish Balay   }
355a30f8f8cSSatish Balay 
356a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
357a30f8f8cSSatish Balay     if (im[i] < 0) continue;
358a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
359*29bbc08cSBarry Smith     if (im[i] >= baij->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
360a30f8f8cSSatish Balay #endif
361a30f8f8cSSatish Balay     if (im[i] >= rstart_orig && im[i] < rend_orig) { /* this processor entry */
362a30f8f8cSSatish Balay       row = im[i] - rstart_orig;              /* local row index */
363a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
364f65c83cfSHong Zhang         if (im[i]/bs > in[j]/bs) continue;    /* ignore lower triangular blocks */
365a30f8f8cSSatish Balay         if (in[j] >= cstart_orig && in[j] < cend_orig){  /* diag entry (A) */
366a30f8f8cSSatish Balay           col = in[j] - cstart_orig;          /* local col index */
367a30f8f8cSSatish Balay           brow = row/bs; bcol = col/bs;
368a30f8f8cSSatish Balay           if (brow > bcol) continue;  /* ignore lower triangular blocks of A */
369a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
370a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv);
371a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
372a30f8f8cSSatish Balay         } else if (in[j] < 0) continue;
373a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
374*29bbc08cSBarry Smith         else if (in[j] >= baij->N) {SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Col too large");}
375a30f8f8cSSatish Balay #endif
376a30f8f8cSSatish Balay         else {  /* off-diag entry (B) */
377a30f8f8cSSatish Balay           if (mat->was_assembled) {
378a30f8f8cSSatish Balay             if (!baij->colmap) {
379a30f8f8cSSatish Balay               ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
380a30f8f8cSSatish Balay             }
381a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
382a30f8f8cSSatish Balay             ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
383a30f8f8cSSatish Balay             col  = col - 1 + in[j]%bs;
384a30f8f8cSSatish Balay #else
385a30f8f8cSSatish Balay             col = baij->colmap[in[j]/bs] - 1 + in[j]%bs;
386a30f8f8cSSatish Balay #endif
387a30f8f8cSSatish Balay             if (col < 0 && !((Mat_SeqSBAIJ*)(baij->A->data))->nonew) {
388a30f8f8cSSatish Balay               ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
389a30f8f8cSSatish Balay               col =  in[j];
390a30f8f8cSSatish Balay               /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
391a30f8f8cSSatish Balay               B = baij->B;
392a30f8f8cSSatish Balay               b = (Mat_SeqBAIJ*)(B)->data;
393a30f8f8cSSatish Balay               bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
394a30f8f8cSSatish Balay               ba=b->a;
395a30f8f8cSSatish Balay             }
396a30f8f8cSSatish Balay           } else col = in[j];
397a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
398a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv);
399a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
400a30f8f8cSSatish Balay         }
401a30f8f8cSSatish Balay       }
402a30f8f8cSSatish Balay     } else {  /* off processor entry */
403a30f8f8cSSatish Balay       if (!baij->donotstash) {
404a30f8f8cSSatish Balay         n_loc = 0;
405a30f8f8cSSatish Balay         for (j=0; j<n; j++){
406f65c83cfSHong Zhang           if (im[i]/bs > in[j]/bs) continue; /* ignore lower triangular blocks */
407a30f8f8cSSatish Balay           in_loc[n_loc] = in[j];
408a30f8f8cSSatish Balay           if (roworiented) {
409a30f8f8cSSatish Balay             v_loc[n_loc] = v[i*n+j];
410a30f8f8cSSatish Balay           } else {
411a30f8f8cSSatish Balay             v_loc[n_loc] = v[j*m+i];
412a30f8f8cSSatish Balay           }
413a30f8f8cSSatish Balay           n_loc++;
414a30f8f8cSSatish Balay         }
415a30f8f8cSSatish Balay         ierr = MatStashValuesRow_Private(&mat->stash,im[i],n_loc,in_loc,v_loc);CHKERRQ(ierr);
416a30f8f8cSSatish Balay       }
417a30f8f8cSSatish Balay     }
418a30f8f8cSSatish Balay   }
419a30f8f8cSSatish Balay 
420a30f8f8cSSatish Balay   if(!baij->donotstash){
421a30f8f8cSSatish Balay     ierr = PetscFree(in_loc);CHKERRQ(ierr);
422a30f8f8cSSatish Balay     ierr = PetscFree(v_loc);CHKERRQ(ierr);
423a30f8f8cSSatish Balay   }
424a30f8f8cSSatish Balay   PetscFunctionReturn(0);
425a30f8f8cSSatish Balay }
426a30f8f8cSSatish Balay 
427a30f8f8cSSatish Balay #undef __FUNC__
428a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValuesBlocked_MPISBAIJ"></a>*/"MatSetValuesBlocked_MPISBAIJ"
429a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
430a30f8f8cSSatish Balay {
431a30f8f8cSSatish Balay   PetscFunctionBegin;
432*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
43396e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
434a30f8f8cSSatish Balay }
435a30f8f8cSSatish Balay 
436a30f8f8cSSatish Balay #define HASH_KEY 0.6180339887
437a30f8f8cSSatish Balay #define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(int)((size)*(tmp-(int)tmp)))
438a30f8f8cSSatish Balay /* #define HASH(size,key) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
439a30f8f8cSSatish Balay /* #define HASH(size,key,tmp) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
440a30f8f8cSSatish Balay #undef __FUNC__
441a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPISBAIJ_HT_MatScalar"></a>*/"MatSetValues_MPISBAIJ_HT_MatScalar"
442a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
443a30f8f8cSSatish Balay {
444a30f8f8cSSatish Balay   PetscFunctionBegin;
445*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
44696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
447a30f8f8cSSatish Balay }
448a30f8f8cSSatish Balay 
449a30f8f8cSSatish Balay #undef __FUNC__
450a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatSetValuesBlocked_MPISBAIJ_HT_MatScalar"
451a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
452a30f8f8cSSatish Balay {
453a30f8f8cSSatish Balay   PetscFunctionBegin;
454*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
45596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
456a30f8f8cSSatish Balay }
457a30f8f8cSSatish Balay 
458a30f8f8cSSatish Balay #undef __FUNC__
459a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetValues_MPISBAIJ"
460a30f8f8cSSatish Balay int MatGetValues_MPISBAIJ(Mat mat,int m,int *idxm,int n,int *idxn,Scalar *v)
461a30f8f8cSSatish Balay {
462f3566a2aSHong Zhang   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
463a30f8f8cSSatish Balay   int        bs=baij->bs,ierr,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
464a30f8f8cSSatish Balay   int        bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;
465a30f8f8cSSatish Balay 
466a30f8f8cSSatish Balay   PetscFunctionBegin;
467a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
468*29bbc08cSBarry Smith     if (idxm[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
469*29bbc08cSBarry Smith     if (idxm[i] >= baij->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
470a30f8f8cSSatish Balay     if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
471a30f8f8cSSatish Balay       row = idxm[i] - bsrstart;
472a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
473*29bbc08cSBarry Smith         if (idxn[j] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative column");
474*29bbc08cSBarry Smith         if (idxn[j] >= baij->N) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
475a30f8f8cSSatish Balay         if (idxn[j] >= bscstart && idxn[j] < bscend){
476a30f8f8cSSatish Balay           col = idxn[j] - bscstart;
477c8407628SSatish Balay           ierr = MatGetValues_SeqSBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
478a30f8f8cSSatish Balay         } else {
479a30f8f8cSSatish Balay           if (!baij->colmap) {
480a30f8f8cSSatish Balay             ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
481a30f8f8cSSatish Balay           }
482a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
483a30f8f8cSSatish Balay           ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
484a30f8f8cSSatish Balay           data --;
485a30f8f8cSSatish Balay #else
486a30f8f8cSSatish Balay           data = baij->colmap[idxn[j]/bs]-1;
487a30f8f8cSSatish Balay #endif
488a30f8f8cSSatish Balay           if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
489a30f8f8cSSatish Balay           else {
490a30f8f8cSSatish Balay             col  = data + idxn[j]%bs;
491c8407628SSatish Balay             ierr = MatGetValues_SeqSBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
492a30f8f8cSSatish Balay           }
493a30f8f8cSSatish Balay         }
494a30f8f8cSSatish Balay       }
495a30f8f8cSSatish Balay     } else {
496*29bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
497a30f8f8cSSatish Balay     }
498a30f8f8cSSatish Balay   }
499a30f8f8cSSatish Balay  PetscFunctionReturn(0);
500a30f8f8cSSatish Balay }
501a30f8f8cSSatish Balay 
502a30f8f8cSSatish Balay #undef __FUNC__
503a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatNorm_MPISBAIJ"
504a30f8f8cSSatish Balay int MatNorm_MPISBAIJ(Mat mat,NormType type,PetscReal *norm)
505a30f8f8cSSatish Balay {
506a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
507bc0ba53dSHong Zhang   /* Mat_SeqSBAIJ *amat = (Mat_SeqSBAIJ*)baij->A->data; */
508bc0ba53dSHong Zhang   /* Mat_SeqBAIJ  *bmat = (Mat_SeqBAIJ*)baij->B->data; */
509a30f8f8cSSatish Balay   int        ierr;
510a30f8f8cSSatish Balay   PetscReal  sum[2],*lnorm2;
511a30f8f8cSSatish Balay 
512a30f8f8cSSatish Balay   PetscFunctionBegin;
513a30f8f8cSSatish Balay   if (baij->size == 1) {
514a30f8f8cSSatish Balay     ierr =  MatNorm(baij->A,type,norm);CHKERRQ(ierr);
515a30f8f8cSSatish Balay   } else {
516a30f8f8cSSatish Balay     if (type == NORM_FROBENIUS) {
517ee237329SHong Zhang       lnorm2 = (double*)PetscMalloc(2*sizeof(double));CHKPTRQ(lnorm2);
518a30f8f8cSSatish Balay       ierr =  MatNorm(baij->A,type,lnorm2);CHKERRQ(ierr);
519a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2++;            /* squar power of norm(A) */
520a30f8f8cSSatish Balay       ierr =  MatNorm(baij->B,type,lnorm2);CHKERRQ(ierr);
521a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2--;             /* squar power of norm(B) */
522a30f8f8cSSatish Balay       /*
523a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
524a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], lnorm2=%g, %g\n",rank,lnorm2[0],lnorm2[1]);
525a30f8f8cSSatish Balay       */
526a30f8f8cSSatish Balay       ierr = MPI_Allreduce(lnorm2,&sum,2,MPI_DOUBLE,MPI_SUM,mat->comm);CHKERRQ(ierr);
527a30f8f8cSSatish Balay       /*
528a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], sum=%g, %g\n",rank,sum[0],sum[1]);
529a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD); */
530a30f8f8cSSatish Balay 
531a30f8f8cSSatish Balay       *norm = sqrt(sum[0] + 2*sum[1]);
532a30f8f8cSSatish Balay       ierr = PetscFree(lnorm2);CHKERRQ(ierr);
533a30f8f8cSSatish Balay     } else {
534*29bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
535a30f8f8cSSatish Balay     }
536a30f8f8cSSatish Balay   }
537a30f8f8cSSatish Balay   PetscFunctionReturn(0);
538a30f8f8cSSatish Balay }
539a30f8f8cSSatish Balay 
540a30f8f8cSSatish Balay /*
541a30f8f8cSSatish Balay   Creates the hash table, and sets the table
542a30f8f8cSSatish Balay   This table is created only once.
543a30f8f8cSSatish Balay   If new entried need to be added to the matrix
544a30f8f8cSSatish Balay   then the hash table has to be destroyed and
545a30f8f8cSSatish Balay   recreated.
546a30f8f8cSSatish Balay */
547a30f8f8cSSatish Balay #undef __FUNC__
548a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatCreateHashTable_MPISBAIJ_Private"
549a30f8f8cSSatish Balay int MatCreateHashTable_MPISBAIJ_Private(Mat mat,PetscReal factor)
550a30f8f8cSSatish Balay {
551a30f8f8cSSatish Balay   PetscFunctionBegin;
552*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
55396e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
554a30f8f8cSSatish Balay }
555a30f8f8cSSatish Balay 
556a30f8f8cSSatish Balay #undef __FUNC__
557a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatAssemblyBegin_MPISBAIJ"
558a30f8f8cSSatish Balay int MatAssemblyBegin_MPISBAIJ(Mat mat,MatAssemblyType mode)
559a30f8f8cSSatish Balay {
560a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
561a30f8f8cSSatish Balay   int         ierr,nstash,reallocs;
562a30f8f8cSSatish Balay   InsertMode  addv;
563a30f8f8cSSatish Balay 
564a30f8f8cSSatish Balay   PetscFunctionBegin;
565a30f8f8cSSatish Balay   if (baij->donotstash) {
566a30f8f8cSSatish Balay     PetscFunctionReturn(0);
567a30f8f8cSSatish Balay   }
568a30f8f8cSSatish Balay 
569a30f8f8cSSatish Balay   /* make sure all processors are either in INSERTMODE or ADDMODE */
570a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
571a30f8f8cSSatish Balay   if (addv == (ADD_VALUES|INSERT_VALUES)) {
572*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
573a30f8f8cSSatish Balay   }
574a30f8f8cSSatish Balay   mat->insertmode = addv; /* in case this processor had no cache */
575a30f8f8cSSatish Balay 
576a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
577a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
578a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
579a30f8f8cSSatish Balay   PLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Stash has %d entries,uses %d mallocs.\n",nstash,reallocs);
580a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
581a30f8f8cSSatish Balay   PLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Block-Stash has %d entries, uses %d mallocs.\n",nstash,reallocs);
582a30f8f8cSSatish Balay   PetscFunctionReturn(0);
583a30f8f8cSSatish Balay }
584a30f8f8cSSatish Balay 
585a30f8f8cSSatish Balay #undef __FUNC__
586a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatAssemblyEnd_MPISBAIJ"
587a30f8f8cSSatish Balay int MatAssemblyEnd_MPISBAIJ(Mat mat,MatAssemblyType mode)
588a30f8f8cSSatish Balay {
589a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij=(Mat_MPISBAIJ*)mat->data;
590a30f8f8cSSatish Balay   Mat_SeqSBAIJ  *a=(Mat_SeqSBAIJ*)baij->A->data;
591a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b=(Mat_SeqBAIJ*)baij->B->data;
592a30f8f8cSSatish Balay   int         i,j,rstart,ncols,n,ierr,flg,bs2=baij->bs2;
593a30f8f8cSSatish Balay   int         *row,*col,other_disassembled;
594a30f8f8cSSatish Balay   PetscTruth  r1,r2,r3;
595a30f8f8cSSatish Balay   MatScalar   *val;
596a30f8f8cSSatish Balay   InsertMode  addv = mat->insertmode;
597a30f8f8cSSatish Balay   int         rank;
598a30f8f8cSSatish Balay 
599a30f8f8cSSatish Balay   PetscFunctionBegin;
600a30f8f8cSSatish Balay   /* remove 2 line below later */
601a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(PETSC_COMM_WORLD, &rank);CHKERRQ(ierr);
602a30f8f8cSSatish Balay 
603a30f8f8cSSatish Balay   if (!baij->donotstash) {
604a30f8f8cSSatish Balay     while (1) {
605a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
606a30f8f8cSSatish Balay       /*
607a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d]: in AssemblyEnd, stash, flg=%d\n",rank,flg);
608a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD);
609a30f8f8cSSatish Balay       */
610a30f8f8cSSatish Balay       if (!flg) break;
611a30f8f8cSSatish Balay 
612a30f8f8cSSatish Balay       for (i=0; i<n;) {
613a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
614a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
615a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
616a30f8f8cSSatish Balay         else       ncols = n-i;
617a30f8f8cSSatish Balay         /* Now assemble all these values with a single function call */
618a30f8f8cSSatish Balay         ierr = MatSetValues_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
619a30f8f8cSSatish Balay         i = j;
620a30f8f8cSSatish Balay       }
621a30f8f8cSSatish Balay     }
622a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
623a30f8f8cSSatish Balay     /* Now process the block-stash. Since the values are stashed column-oriented,
624a30f8f8cSSatish Balay        set the roworiented flag to column oriented, and after MatSetValues()
625a30f8f8cSSatish Balay        restore the original flags */
626a30f8f8cSSatish Balay     r1 = baij->roworiented;
627a30f8f8cSSatish Balay     r2 = a->roworiented;
628a30f8f8cSSatish Balay     r3 = b->roworiented;
629a30f8f8cSSatish Balay     baij->roworiented = PETSC_FALSE;
630a30f8f8cSSatish Balay     a->roworiented    = PETSC_FALSE;
631a30f8f8cSSatish Balay     b->roworiented    = PETSC_FALSE;
632a30f8f8cSSatish Balay     while (1) {
633a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
634a30f8f8cSSatish Balay       if (!flg) break;
635a30f8f8cSSatish Balay 
636a30f8f8cSSatish Balay       for (i=0; i<n;) {
637a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
638a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
639a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
640a30f8f8cSSatish Balay         else       ncols = n-i;
641a30f8f8cSSatish Balay         ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
642a30f8f8cSSatish Balay         i = j;
643a30f8f8cSSatish Balay       }
644a30f8f8cSSatish Balay     }
645a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
646a30f8f8cSSatish Balay     baij->roworiented = r1;
647a30f8f8cSSatish Balay     a->roworiented    = r2;
648a30f8f8cSSatish Balay     b->roworiented    = r3;
649a30f8f8cSSatish Balay   }
650a30f8f8cSSatish Balay 
651a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
652a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);
653a30f8f8cSSatish Balay 
654a30f8f8cSSatish Balay   /* determine if any processor has disassembled, if so we must
655a30f8f8cSSatish Balay      also disassemble ourselfs, in order that we may reassemble. */
656a30f8f8cSSatish Balay   /*
657a30f8f8cSSatish Balay      if nonzero structure of submatrix B cannot change then we know that
658a30f8f8cSSatish Balay      no processor disassembled thus we can skip this stuff
659a30f8f8cSSatish Balay   */
660a30f8f8cSSatish Balay   if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
661a30f8f8cSSatish Balay     ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
662a30f8f8cSSatish Balay     if (mat->was_assembled && !other_disassembled) {
663c8407628SSatish Balay       ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
664a30f8f8cSSatish Balay     }
665a30f8f8cSSatish Balay   }
666a30f8f8cSSatish Balay 
667a30f8f8cSSatish Balay   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
668a30f8f8cSSatish Balay     ierr = MatSetUpMultiply_MPISBAIJ(mat);CHKERRQ(ierr);
669a30f8f8cSSatish Balay   }
670a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
671a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);
672a30f8f8cSSatish Balay 
673a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
674a30f8f8cSSatish Balay   if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
675a30f8f8cSSatish Balay     PLogInfo(0,"MatAssemblyEnd_MPISBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((double)baij->ht_total_ct)/baij->ht_insert_ct);
676a30f8f8cSSatish Balay     baij->ht_total_ct  = 0;
677a30f8f8cSSatish Balay     baij->ht_insert_ct = 0;
678a30f8f8cSSatish Balay   }
679a30f8f8cSSatish Balay #endif
680a30f8f8cSSatish Balay   if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
681c8407628SSatish Balay     ierr = MatCreateHashTable_MPISBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
682a30f8f8cSSatish Balay     mat->ops->setvalues        = MatSetValues_MPISBAIJ_HT;
683a30f8f8cSSatish Balay     mat->ops->setvaluesblocked = MatSetValuesBlocked_MPISBAIJ_HT;
684a30f8f8cSSatish Balay   }
685a30f8f8cSSatish Balay 
686a30f8f8cSSatish Balay   if (baij->rowvalues) {
687a30f8f8cSSatish Balay     ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
688a30f8f8cSSatish Balay     baij->rowvalues = 0;
689a30f8f8cSSatish Balay   }
690a30f8f8cSSatish Balay   PetscFunctionReturn(0);
691a30f8f8cSSatish Balay }
692a30f8f8cSSatish Balay 
693a30f8f8cSSatish Balay #undef __FUNC__
694a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatView_MPISBAIJ_ASCIIorDraworSocket"
695a30f8f8cSSatish Balay static int MatView_MPISBAIJ_ASCIIorDraworSocket(Mat mat,Viewer viewer)
696a30f8f8cSSatish Balay {
697a30f8f8cSSatish Balay   Mat_MPISBAIJ  *baij = (Mat_MPISBAIJ*)mat->data;
698a30f8f8cSSatish Balay   int          ierr,format,bs = baij->bs,size = baij->size,rank = baij->rank;
699a30f8f8cSSatish Balay   PetscTruth   isascii,isdraw;
70065d70643SHong Zhang   Viewer       sviewer;
701a30f8f8cSSatish Balay 
702a30f8f8cSSatish Balay   PetscFunctionBegin;
703a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,ASCII_VIEWER,&isascii);CHKERRQ(ierr);
704a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,DRAW_VIEWER,&isdraw);CHKERRQ(ierr);
705a30f8f8cSSatish Balay   if (isascii) {
706a30f8f8cSSatish Balay     ierr = ViewerGetFormat(viewer,&format);CHKERRQ(ierr);
707a30f8f8cSSatish Balay     if (format == VIEWER_FORMAT_ASCII_INFO_LONG) {
708a30f8f8cSSatish Balay       MatInfo info;
709a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
710a30f8f8cSSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
711a30f8f8cSSatish Balay       ierr = ViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %d nz %d nz alloced %d bs %d mem %d\n",
712a30f8f8cSSatish Balay               rank,baij->m,(int)info.nz_used*bs,(int)info.nz_allocated*bs,
713a30f8f8cSSatish Balay               baij->bs,(int)info.memory);CHKERRQ(ierr);
714a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
715a30f8f8cSSatish Balay       ierr = ViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
716a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
717a30f8f8cSSatish Balay       ierr = ViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
718a30f8f8cSSatish Balay       ierr = ViewerFlush(viewer);CHKERRQ(ierr);
719a30f8f8cSSatish Balay       ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
720a30f8f8cSSatish Balay       PetscFunctionReturn(0);
721a30f8f8cSSatish Balay     } else if (format == VIEWER_FORMAT_ASCII_INFO) {
722a30f8f8cSSatish Balay       ierr = ViewerASCIIPrintf(viewer,"  block size is %d\n",bs);CHKERRQ(ierr);
723a30f8f8cSSatish Balay       PetscFunctionReturn(0);
724a30f8f8cSSatish Balay     }
725a30f8f8cSSatish Balay   }
726a30f8f8cSSatish Balay 
727a30f8f8cSSatish Balay   if (isdraw) {
728a30f8f8cSSatish Balay     Draw       draw;
729a30f8f8cSSatish Balay     PetscTruth isnull;
730a30f8f8cSSatish Balay     ierr = ViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
731a30f8f8cSSatish Balay     ierr = DrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
732a30f8f8cSSatish Balay   }
733a30f8f8cSSatish Balay 
734a30f8f8cSSatish Balay   if (size == 1) {
735a30f8f8cSSatish Balay     ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
736a30f8f8cSSatish Balay   } else {
737a30f8f8cSSatish Balay     /* assemble the entire matrix onto first processor. */
738a30f8f8cSSatish Balay     Mat         A;
73965d70643SHong Zhang     Mat_SeqSBAIJ *Aloc;
74065d70643SHong Zhang     Mat_SeqBAIJ *Bloc;
741a30f8f8cSSatish Balay     int         M = baij->M,N = baij->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
742a30f8f8cSSatish Balay     MatScalar   *a;
743a30f8f8cSSatish Balay 
744a30f8f8cSSatish Balay     if (!rank) {
745bc0ba53dSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,M,N,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
746a30f8f8cSSatish Balay     } else {
747f65c83cfSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,0,0,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
748a30f8f8cSSatish Balay     }
749a30f8f8cSSatish Balay     PLogObjectParent(mat,A);
750a30f8f8cSSatish Balay 
751a30f8f8cSSatish Balay     /* copy over the A part */
75265d70643SHong Zhang     Aloc  = (Mat_SeqSBAIJ*)baij->A->data;
753a30f8f8cSSatish Balay     ai    = Aloc->i; aj = Aloc->j; a = Aloc->a;
754a30f8f8cSSatish Balay     rvals = (int*)PetscMalloc(bs*sizeof(int));CHKPTRQ(rvals);
755a30f8f8cSSatish Balay 
756a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
757a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
758a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
759a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
760a30f8f8cSSatish Balay         col = (baij->cstart+aj[j])*bs;
761a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
762a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
763a30f8f8cSSatish Balay           col++; a += bs;
764a30f8f8cSSatish Balay         }
765a30f8f8cSSatish Balay       }
766a30f8f8cSSatish Balay     }
767a30f8f8cSSatish Balay     /* copy over the B part */
76865d70643SHong Zhang     Bloc = (Mat_SeqBAIJ*)baij->B->data;
76965d70643SHong Zhang     ai = Bloc->i; aj = Bloc->j; a = Bloc->a;
770a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
771a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
772a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
773a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
774a30f8f8cSSatish Balay         col = baij->garray[aj[j]]*bs;
775a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
776a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
777a30f8f8cSSatish Balay           col++; a += bs;
778a30f8f8cSSatish Balay         }
779a30f8f8cSSatish Balay       }
780a30f8f8cSSatish Balay     }
781a30f8f8cSSatish Balay     ierr = PetscFree(rvals);CHKERRQ(ierr);
782a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
783a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
784a30f8f8cSSatish Balay     /*
785a30f8f8cSSatish Balay        Everyone has to call to draw the matrix since the graphics waits are
786a30f8f8cSSatish Balay        synchronized across all processors that share the Draw object
787a30f8f8cSSatish Balay     */
788a30f8f8cSSatish Balay     ierr = ViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
78965d70643SHong Zhang     if (!rank) {
790a30f8f8cSSatish Balay       ierr = MatView(((Mat_MPISBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
791a30f8f8cSSatish Balay     }
79265d70643SHong Zhang     ierr = ViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
793a30f8f8cSSatish Balay     ierr = MatDestroy(A);CHKERRQ(ierr);
794a30f8f8cSSatish Balay   }
795a30f8f8cSSatish Balay   PetscFunctionReturn(0);
796a30f8f8cSSatish Balay }
797a30f8f8cSSatish Balay 
798a30f8f8cSSatish Balay #undef __FUNC__
799a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatView_MPISBAIJ"
800a30f8f8cSSatish Balay int MatView_MPISBAIJ(Mat mat,Viewer viewer)
801a30f8f8cSSatish Balay {
802a30f8f8cSSatish Balay   int        ierr;
803a30f8f8cSSatish Balay   PetscTruth isascii,isdraw,issocket,isbinary;
804a30f8f8cSSatish Balay 
805a30f8f8cSSatish Balay   PetscFunctionBegin;
806a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,ASCII_VIEWER,&isascii);CHKERRQ(ierr);
807a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,DRAW_VIEWER,&isdraw);CHKERRQ(ierr);
808a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,SOCKET_VIEWER,&issocket);CHKERRQ(ierr);
809a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,BINARY_VIEWER,&isbinary);CHKERRQ(ierr);
810a30f8f8cSSatish Balay   if (isascii || isdraw || issocket || isbinary) {
811a30f8f8cSSatish Balay     ierr = MatView_MPISBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
812a30f8f8cSSatish Balay   } else {
813*29bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by MPISBAIJ matrices",((PetscObject)viewer)->type_name);
814a30f8f8cSSatish Balay   }
815a30f8f8cSSatish Balay   PetscFunctionReturn(0);
816a30f8f8cSSatish Balay }
817a30f8f8cSSatish Balay 
818a30f8f8cSSatish Balay #undef __FUNC__
819a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatDestroy_MPISBAIJ"
820a30f8f8cSSatish Balay int MatDestroy_MPISBAIJ(Mat mat)
821a30f8f8cSSatish Balay {
822a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
823a30f8f8cSSatish Balay   int         ierr;
824a30f8f8cSSatish Balay 
825a30f8f8cSSatish Balay   PetscFunctionBegin;
826a30f8f8cSSatish Balay 
827a30f8f8cSSatish Balay   if (mat->mapping) {
828a30f8f8cSSatish Balay     ierr = ISLocalToGlobalMappingDestroy(mat->mapping);CHKERRQ(ierr);
829a30f8f8cSSatish Balay   }
830a30f8f8cSSatish Balay   if (mat->bmapping) {
831a30f8f8cSSatish Balay     ierr = ISLocalToGlobalMappingDestroy(mat->bmapping);CHKERRQ(ierr);
832a30f8f8cSSatish Balay   }
833a30f8f8cSSatish Balay   if (mat->rmap) {
834a30f8f8cSSatish Balay     ierr = MapDestroy(mat->rmap);CHKERRQ(ierr);
835a30f8f8cSSatish Balay   }
836a30f8f8cSSatish Balay   if (mat->cmap) {
837a30f8f8cSSatish Balay     ierr = MapDestroy(mat->cmap);CHKERRQ(ierr);
838a30f8f8cSSatish Balay   }
839a30f8f8cSSatish Balay #if defined(PETSC_USE_LOG)
840a30f8f8cSSatish Balay   PLogObjectState((PetscObject)mat,"Rows=%d,Cols=%d",baij->M,baij->N);
841a30f8f8cSSatish Balay #endif
842a30f8f8cSSatish Balay 
843a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
844a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
845a30f8f8cSSatish Balay 
846a30f8f8cSSatish Balay   ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
847a30f8f8cSSatish Balay   ierr = MatDestroy(baij->A);CHKERRQ(ierr);
848a30f8f8cSSatish Balay   ierr = MatDestroy(baij->B);CHKERRQ(ierr);
849a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
850a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
851a30f8f8cSSatish Balay #else
852a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
853a30f8f8cSSatish Balay #endif
854a30f8f8cSSatish Balay   if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
855a30f8f8cSSatish Balay   if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
856a30f8f8cSSatish Balay   if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
857a30f8f8cSSatish Balay   if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
858a30f8f8cSSatish Balay   if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
859a30f8f8cSSatish Balay   if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
860a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
861a30f8f8cSSatish Balay   if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
862a30f8f8cSSatish Balay #endif
863a30f8f8cSSatish Balay   ierr = PetscFree(baij);CHKERRQ(ierr);
864a30f8f8cSSatish Balay   PLogObjectDestroy(mat);
865a30f8f8cSSatish Balay   PetscHeaderDestroy(mat);
866a30f8f8cSSatish Balay   PetscFunctionReturn(0);
867a30f8f8cSSatish Balay }
868a30f8f8cSSatish Balay 
869a30f8f8cSSatish Balay #undef __FUNC__
870a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMult_MPISBAIJ"
871a30f8f8cSSatish Balay int MatMult_MPISBAIJ(Mat A,Vec xx,Vec yy)
872a30f8f8cSSatish Balay {
873a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
874a30f8f8cSSatish Balay   int         ierr,nt;
875a30f8f8cSSatish Balay 
876a30f8f8cSSatish Balay   PetscFunctionBegin;
877a30f8f8cSSatish Balay   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
878a30f8f8cSSatish Balay   if (nt != a->n) {
879*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
880a30f8f8cSSatish Balay   }
881a30f8f8cSSatish Balay   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
882a30f8f8cSSatish Balay   if (nt != a->m) {
883*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
884a30f8f8cSSatish Balay   }
88565d70643SHong Zhang 
886b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
887b941877fSHong Zhang   /* do diagonal part */
888b941877fSHong Zhang   ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
889b941877fSHong Zhang   /* do supperdiagonal part */
890b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
891b941877fSHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
892b941877fSHong Zhang   /* do subdiagonal part */
893b941877fSHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
894b941877fSHong Zhang   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
895b941877fSHong Zhang   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
89665d70643SHong Zhang 
897a30f8f8cSSatish Balay   PetscFunctionReturn(0);
898a30f8f8cSSatish Balay }
899a30f8f8cSSatish Balay 
900a30f8f8cSSatish Balay #undef __FUNC__
901a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMultAdd_MPISBAIJ"
902a30f8f8cSSatish Balay int MatMultAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
903a30f8f8cSSatish Balay {
904de8b6608SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
905aa482183SHong Zhang   int        ierr;
906a30f8f8cSSatish Balay 
907a30f8f8cSSatish Balay   PetscFunctionBegin;
908b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
909b941877fSHong Zhang   /* do diagonal part */
910b941877fSHong Zhang   ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
911b941877fSHong Zhang   /* do supperdiagonal part */
912b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
913de8b6608SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
914de8b6608SHong Zhang 
915b941877fSHong Zhang   /* do subdiagonal part */
916a30f8f8cSSatish Balay   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
917a30f8f8cSSatish Balay   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
918a30f8f8cSSatish Balay   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
919aa482183SHong Zhang 
920a30f8f8cSSatish Balay   PetscFunctionReturn(0);
921a30f8f8cSSatish Balay }
922a30f8f8cSSatish Balay 
923a30f8f8cSSatish Balay #undef __FUNC__
924a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMultTranspose_MPISBAIJ"
925a30f8f8cSSatish Balay int MatMultTranspose_MPISBAIJ(Mat A,Vec xx,Vec yy)
926a30f8f8cSSatish Balay {
927a30f8f8cSSatish Balay   PetscFunctionBegin;
928*29bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMult().");
92996e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
930a30f8f8cSSatish Balay }
931a30f8f8cSSatish Balay 
932a30f8f8cSSatish Balay #undef __FUNC__
933a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMultTransposeAdd_MPISBAIJ"
934a30f8f8cSSatish Balay int MatMultTransposeAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
935a30f8f8cSSatish Balay {
936a30f8f8cSSatish Balay   PetscFunctionBegin;
937*29bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMultAdd().");
93896e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
939a30f8f8cSSatish Balay }
940a30f8f8cSSatish Balay 
941a30f8f8cSSatish Balay /*
942a30f8f8cSSatish Balay   This only works correctly for square matrices where the subblock A->A is the
943a30f8f8cSSatish Balay    diagonal block
944a30f8f8cSSatish Balay */
945a30f8f8cSSatish Balay #undef __FUNC__
946a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetDiagonal_MPISBAIJ"
947a30f8f8cSSatish Balay int MatGetDiagonal_MPISBAIJ(Mat A,Vec v)
948a30f8f8cSSatish Balay {
949a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
950a30f8f8cSSatish Balay   int         ierr;
951a30f8f8cSSatish Balay 
952a30f8f8cSSatish Balay   PetscFunctionBegin;
953*29bbc08cSBarry Smith   /* if (a->M != a->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block"); */
954a30f8f8cSSatish Balay   ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
955a30f8f8cSSatish Balay   PetscFunctionReturn(0);
956a30f8f8cSSatish Balay }
957a30f8f8cSSatish Balay 
958a30f8f8cSSatish Balay #undef __FUNC__
959a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatScale_MPISBAIJ"
960a30f8f8cSSatish Balay int MatScale_MPISBAIJ(Scalar *aa,Mat A)
961a30f8f8cSSatish Balay {
962a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
963a30f8f8cSSatish Balay   int         ierr;
964a30f8f8cSSatish Balay 
965a30f8f8cSSatish Balay   PetscFunctionBegin;
966a30f8f8cSSatish Balay   ierr = MatScale(aa,a->A);CHKERRQ(ierr);
967a30f8f8cSSatish Balay   ierr = MatScale(aa,a->B);CHKERRQ(ierr);
968a30f8f8cSSatish Balay   PetscFunctionReturn(0);
969a30f8f8cSSatish Balay }
970a30f8f8cSSatish Balay 
971a30f8f8cSSatish Balay #undef __FUNC__
972a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetSize_MPISBAIJ"
973a30f8f8cSSatish Balay int MatGetSize_MPISBAIJ(Mat matin,int *m,int *n)
974a30f8f8cSSatish Balay {
975a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
976a30f8f8cSSatish Balay 
977a30f8f8cSSatish Balay   PetscFunctionBegin;
978a30f8f8cSSatish Balay   if (m) *m = mat->M;
979a30f8f8cSSatish Balay   if (n) *n = mat->N;
980a30f8f8cSSatish Balay   PetscFunctionReturn(0);
981a30f8f8cSSatish Balay }
982a30f8f8cSSatish Balay 
983a30f8f8cSSatish Balay #undef __FUNC__
984a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetLocalSize_MPISBAIJ"
985a30f8f8cSSatish Balay int MatGetLocalSize_MPISBAIJ(Mat matin,int *m,int *n)
986a30f8f8cSSatish Balay {
987a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
988a30f8f8cSSatish Balay 
989a30f8f8cSSatish Balay   PetscFunctionBegin;
990a30f8f8cSSatish Balay   *m = mat->m; *n = mat->n;
991a30f8f8cSSatish Balay   PetscFunctionReturn(0);
992a30f8f8cSSatish Balay }
993a30f8f8cSSatish Balay 
994a30f8f8cSSatish Balay #undef __FUNC__
995a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetOwnershipRange_MPISBAIJ"
996a30f8f8cSSatish Balay int MatGetOwnershipRange_MPISBAIJ(Mat matin,int *m,int *n)
997a30f8f8cSSatish Balay {
998a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
999a30f8f8cSSatish Balay 
1000a30f8f8cSSatish Balay   PetscFunctionBegin;
1001a30f8f8cSSatish Balay   if (m) *m = mat->rstart*mat->bs;
1002a30f8f8cSSatish Balay   if (n) *n = mat->rend*mat->bs;
1003a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1004a30f8f8cSSatish Balay }
1005a30f8f8cSSatish Balay 
1006a30f8f8cSSatish Balay #undef __FUNC__
1007a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetRow_MPISBAIJ"
1008a30f8f8cSSatish Balay int MatGetRow_MPISBAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
1009a30f8f8cSSatish Balay {
1010a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
1011a30f8f8cSSatish Balay   Scalar     *vworkA,*vworkB,**pvA,**pvB,*v_p;
1012a30f8f8cSSatish Balay   int        bs = mat->bs,bs2 = mat->bs2,i,ierr,*cworkA,*cworkB,**pcA,**pcB;
1013a30f8f8cSSatish Balay   int        nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
1014a30f8f8cSSatish Balay   int        *cmap,*idx_p,cstart = mat->cstart;
1015a30f8f8cSSatish Balay 
1016a30f8f8cSSatish Balay   PetscFunctionBegin;
1017*29bbc08cSBarry Smith   if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
1018a30f8f8cSSatish Balay   mat->getrowactive = PETSC_TRUE;
1019a30f8f8cSSatish Balay 
1020a30f8f8cSSatish Balay   if (!mat->rowvalues && (idx || v)) {
1021a30f8f8cSSatish Balay     /*
1022a30f8f8cSSatish Balay         allocate enough space to hold information from the longest row.
1023a30f8f8cSSatish Balay     */
1024a30f8f8cSSatish Balay     Mat_SeqSBAIJ *Aa = (Mat_SeqSBAIJ*)mat->A->data;
1025a30f8f8cSSatish Balay     Mat_SeqBAIJ  *Ba = (Mat_SeqBAIJ*)mat->B->data;
1026a30f8f8cSSatish Balay     int     max = 1,mbs = mat->mbs,tmp;
1027a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
1028a30f8f8cSSatish Balay       tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i]; /* row length */
1029a30f8f8cSSatish Balay       if (max < tmp) { max = tmp; }
1030a30f8f8cSSatish Balay     }
1031a30f8f8cSSatish Balay     mat->rowvalues = (Scalar*)PetscMalloc(max*bs2*(sizeof(int)+sizeof(Scalar)));CHKPTRQ(mat->rowvalues);
1032a30f8f8cSSatish Balay     mat->rowindices = (int*)(mat->rowvalues + max*bs2);
1033a30f8f8cSSatish Balay   }
1034a30f8f8cSSatish Balay 
1035*29bbc08cSBarry Smith   if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
1036a30f8f8cSSatish Balay   lrow = row - brstart;  /* local row index */
1037a30f8f8cSSatish Balay 
1038a30f8f8cSSatish Balay   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1039a30f8f8cSSatish Balay   if (!v)   {pvA = 0; pvB = 0;}
1040a30f8f8cSSatish Balay   if (!idx) {pcA = 0; if (!v) pcB = 0;}
1041a30f8f8cSSatish Balay   ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1042a30f8f8cSSatish Balay   ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1043a30f8f8cSSatish Balay   nztot = nzA + nzB;
1044a30f8f8cSSatish Balay 
1045a30f8f8cSSatish Balay   cmap  = mat->garray;
1046a30f8f8cSSatish Balay   if (v  || idx) {
1047a30f8f8cSSatish Balay     if (nztot) {
1048a30f8f8cSSatish Balay       /* Sort by increasing column numbers, assuming A and B already sorted */
1049a30f8f8cSSatish Balay       int imark = -1;
1050a30f8f8cSSatish Balay       if (v) {
1051a30f8f8cSSatish Balay         *v = v_p = mat->rowvalues;
1052a30f8f8cSSatish Balay         for (i=0; i<nzB; i++) {
1053a30f8f8cSSatish Balay           if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
1054a30f8f8cSSatish Balay           else break;
1055a30f8f8cSSatish Balay         }
1056a30f8f8cSSatish Balay         imark = i;
1057a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
1058a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
1059a30f8f8cSSatish Balay       }
1060a30f8f8cSSatish Balay       if (idx) {
1061a30f8f8cSSatish Balay         *idx = idx_p = mat->rowindices;
1062a30f8f8cSSatish Balay         if (imark > -1) {
1063a30f8f8cSSatish Balay           for (i=0; i<imark; i++) {
1064a30f8f8cSSatish Balay             idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
1065a30f8f8cSSatish Balay           }
1066a30f8f8cSSatish Balay         } else {
1067a30f8f8cSSatish Balay           for (i=0; i<nzB; i++) {
1068a30f8f8cSSatish Balay             if (cmap[cworkB[i]/bs] < cstart)
1069a30f8f8cSSatish Balay               idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1070a30f8f8cSSatish Balay             else break;
1071a30f8f8cSSatish Balay           }
1072a30f8f8cSSatish Balay           imark = i;
1073a30f8f8cSSatish Balay         }
1074a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
1075a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1076a30f8f8cSSatish Balay       }
1077a30f8f8cSSatish Balay     } else {
1078a30f8f8cSSatish Balay       if (idx) *idx = 0;
1079a30f8f8cSSatish Balay       if (v)   *v   = 0;
1080a30f8f8cSSatish Balay     }
1081a30f8f8cSSatish Balay   }
1082a30f8f8cSSatish Balay   *nz = nztot;
1083a30f8f8cSSatish Balay   ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1084a30f8f8cSSatish Balay   ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1085a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1086a30f8f8cSSatish Balay }
1087a30f8f8cSSatish Balay 
1088a30f8f8cSSatish Balay #undef __FUNC__
1089a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatRestoreRow_MPISBAIJ"
1090a30f8f8cSSatish Balay int MatRestoreRow_MPISBAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
1091a30f8f8cSSatish Balay {
1092a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1093a30f8f8cSSatish Balay 
1094a30f8f8cSSatish Balay   PetscFunctionBegin;
1095a30f8f8cSSatish Balay   if (baij->getrowactive == PETSC_FALSE) {
1096*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
1097a30f8f8cSSatish Balay   }
1098a30f8f8cSSatish Balay   baij->getrowactive = PETSC_FALSE;
1099a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1100a30f8f8cSSatish Balay }
1101a30f8f8cSSatish Balay 
1102a30f8f8cSSatish Balay #undef __FUNC__
1103a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetBlockSize_MPISBAIJ"
1104a30f8f8cSSatish Balay int MatGetBlockSize_MPISBAIJ(Mat mat,int *bs)
1105a30f8f8cSSatish Balay {
1106a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1107a30f8f8cSSatish Balay 
1108a30f8f8cSSatish Balay   PetscFunctionBegin;
1109a30f8f8cSSatish Balay   *bs = baij->bs;
1110a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1111a30f8f8cSSatish Balay }
1112a30f8f8cSSatish Balay 
1113a30f8f8cSSatish Balay #undef __FUNC__
1114a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatZeroEntries_MPISBAIJ"
1115a30f8f8cSSatish Balay int MatZeroEntries_MPISBAIJ(Mat A)
1116a30f8f8cSSatish Balay {
1117a30f8f8cSSatish Balay   Mat_MPISBAIJ *l = (Mat_MPISBAIJ*)A->data;
1118a30f8f8cSSatish Balay   int         ierr;
1119a30f8f8cSSatish Balay 
1120a30f8f8cSSatish Balay   PetscFunctionBegin;
1121a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
1122a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
1123a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1124a30f8f8cSSatish Balay }
1125a30f8f8cSSatish Balay 
1126a30f8f8cSSatish Balay #undef __FUNC__
1127a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetInfo_MPISBAIJ"
1128a30f8f8cSSatish Balay int MatGetInfo_MPISBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
1129a30f8f8cSSatish Balay {
1130a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)matin->data;
1131a30f8f8cSSatish Balay   Mat         A = a->A,B = a->B;
1132a30f8f8cSSatish Balay   int         ierr;
1133a30f8f8cSSatish Balay   PetscReal   isend[5],irecv[5];
1134a30f8f8cSSatish Balay 
1135a30f8f8cSSatish Balay   PetscFunctionBegin;
1136a30f8f8cSSatish Balay   info->block_size     = (double)a->bs;
1137a30f8f8cSSatish Balay   ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
1138a30f8f8cSSatish Balay   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
1139a30f8f8cSSatish Balay   isend[3] = info->memory;  isend[4] = info->mallocs;
1140a30f8f8cSSatish Balay   ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
1141a30f8f8cSSatish Balay   isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
1142a30f8f8cSSatish Balay   isend[3] += info->memory;  isend[4] += info->mallocs;
1143a30f8f8cSSatish Balay   if (flag == MAT_LOCAL) {
1144a30f8f8cSSatish Balay     info->nz_used      = isend[0];
1145a30f8f8cSSatish Balay     info->nz_allocated = isend[1];
1146a30f8f8cSSatish Balay     info->nz_unneeded  = isend[2];
1147a30f8f8cSSatish Balay     info->memory       = isend[3];
1148a30f8f8cSSatish Balay     info->mallocs      = isend[4];
1149a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_MAX) {
1150a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_MAX,matin->comm);CHKERRQ(ierr);
1151a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1152a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1153a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1154a30f8f8cSSatish Balay     info->memory       = irecv[3];
1155a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1156a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_SUM) {
1157a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_SUM,matin->comm);CHKERRQ(ierr);
1158a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1159a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1160a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1161a30f8f8cSSatish Balay     info->memory       = irecv[3];
1162a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1163a30f8f8cSSatish Balay   } else {
1164*29bbc08cSBarry Smith     SETERRQ1(1,"Unknown MatInfoType argument %d",flag);
1165a30f8f8cSSatish Balay   }
1166a30f8f8cSSatish Balay   info->rows_global       = (double)a->M;
1167a30f8f8cSSatish Balay   info->columns_global    = (double)a->N;
1168a30f8f8cSSatish Balay   info->rows_local        = (double)a->m;
1169a30f8f8cSSatish Balay   info->columns_local     = (double)a->N;
1170a30f8f8cSSatish Balay   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
1171a30f8f8cSSatish Balay   info->fill_ratio_needed = 0;
1172a30f8f8cSSatish Balay   info->factor_mallocs    = 0;
1173a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1174a30f8f8cSSatish Balay }
1175a30f8f8cSSatish Balay 
1176a30f8f8cSSatish Balay #undef __FUNC__
1177a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatSetOption_MPISBAIJ"
1178a30f8f8cSSatish Balay int MatSetOption_MPISBAIJ(Mat A,MatOption op)
1179a30f8f8cSSatish Balay {
1180a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1181a30f8f8cSSatish Balay   int         ierr;
1182a30f8f8cSSatish Balay 
1183a30f8f8cSSatish Balay   PetscFunctionBegin;
1184a30f8f8cSSatish Balay   if (op == MAT_NO_NEW_NONZERO_LOCATIONS ||
1185a30f8f8cSSatish Balay       op == MAT_YES_NEW_NONZERO_LOCATIONS ||
1186a30f8f8cSSatish Balay       op == MAT_COLUMNS_UNSORTED ||
1187a30f8f8cSSatish Balay       op == MAT_COLUMNS_SORTED ||
1188a30f8f8cSSatish Balay       op == MAT_NEW_NONZERO_ALLOCATION_ERR ||
1189a30f8f8cSSatish Balay       op == MAT_KEEP_ZEROED_ROWS ||
1190a30f8f8cSSatish Balay       op == MAT_NEW_NONZERO_LOCATION_ERR) {
1191a30f8f8cSSatish Balay         ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1192a30f8f8cSSatish Balay         ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1193a30f8f8cSSatish Balay   } else if (op == MAT_ROW_ORIENTED) {
1194a30f8f8cSSatish Balay         a->roworiented = PETSC_TRUE;
1195a30f8f8cSSatish Balay         ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1196a30f8f8cSSatish Balay         ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1197a30f8f8cSSatish Balay   } else if (op == MAT_ROWS_SORTED ||
1198a30f8f8cSSatish Balay              op == MAT_ROWS_UNSORTED ||
1199a30f8f8cSSatish Balay              op == MAT_SYMMETRIC ||
1200a30f8f8cSSatish Balay              op == MAT_STRUCTURALLY_SYMMETRIC ||
1201a30f8f8cSSatish Balay              op == MAT_YES_NEW_DIAGONALS ||
1202a30f8f8cSSatish Balay              op == MAT_USE_HASH_TABLE) {
1203a30f8f8cSSatish Balay     PLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
1204a30f8f8cSSatish Balay   } else if (op == MAT_COLUMN_ORIENTED) {
1205a30f8f8cSSatish Balay     a->roworiented = PETSC_FALSE;
1206a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1207a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1208a30f8f8cSSatish Balay   } else if (op == MAT_IGNORE_OFF_PROC_ENTRIES) {
1209a30f8f8cSSatish Balay     a->donotstash = PETSC_TRUE;
1210a30f8f8cSSatish Balay   } else if (op == MAT_NO_NEW_DIAGONALS) {
1211*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
1212a30f8f8cSSatish Balay   } else if (op == MAT_USE_HASH_TABLE) {
1213a30f8f8cSSatish Balay     a->ht_flag = PETSC_TRUE;
1214a30f8f8cSSatish Balay   } else {
1215*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"unknown option");
1216a30f8f8cSSatish Balay   }
1217a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1218a30f8f8cSSatish Balay }
1219a30f8f8cSSatish Balay 
1220a30f8f8cSSatish Balay #undef __FUNC__
1221a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatTranspose_MPISBAIJ("
1222a30f8f8cSSatish Balay int MatTranspose_MPISBAIJ(Mat A,Mat *matout)
1223a30f8f8cSSatish Balay {
1224a30f8f8cSSatish Balay   PetscFunctionBegin;
1225*29bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. MatTranspose() should not be called");
122696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
1227a30f8f8cSSatish Balay }
1228a30f8f8cSSatish Balay 
1229a30f8f8cSSatish Balay #undef __FUNC__
1230a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatDiagonalScale_MPISBAIJ"
1231a30f8f8cSSatish Balay int MatDiagonalScale_MPISBAIJ(Mat mat,Vec ll,Vec rr)
1232a30f8f8cSSatish Balay {
1233a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1234a30f8f8cSSatish Balay   Mat         a = baij->A,b = baij->B;
1235a30f8f8cSSatish Balay   int         ierr,s1,s2,s3;
1236a30f8f8cSSatish Balay 
1237a30f8f8cSSatish Balay   PetscFunctionBegin;
1238a30f8f8cSSatish Balay   if (ll != rr) {
1239*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n");
1240a30f8f8cSSatish Balay   }
1241a30f8f8cSSatish Balay   ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
1242a30f8f8cSSatish Balay   if (rr) {
1243a30f8f8cSSatish Balay     ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
1244*29bbc08cSBarry Smith     if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
1245a30f8f8cSSatish Balay     /* Overlap communication with computation. */
1246a30f8f8cSSatish Balay     ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1247a30f8f8cSSatish Balay     /*} if (ll) { */
1248a30f8f8cSSatish Balay     ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
1249*29bbc08cSBarry Smith     if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
1250a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
1251a30f8f8cSSatish Balay     /* } */
1252a30f8f8cSSatish Balay   /* scale  the diagonal block */
1253a30f8f8cSSatish Balay   ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);
1254a30f8f8cSSatish Balay 
1255a30f8f8cSSatish Balay   /* if (rr) { */
1256a30f8f8cSSatish Balay     /* Do a scatter end and then right scale the off-diagonal block */
1257a30f8f8cSSatish Balay     ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1258a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
1259a30f8f8cSSatish Balay   }
1260a30f8f8cSSatish Balay 
1261a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1262a30f8f8cSSatish Balay }
1263a30f8f8cSSatish Balay 
1264a30f8f8cSSatish Balay #undef __FUNC__
1265a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatZeroRows_MPISBAIJ"
1266a30f8f8cSSatish Balay int MatZeroRows_MPISBAIJ(Mat A,IS is,Scalar *diag)
1267a30f8f8cSSatish Balay {
1268a30f8f8cSSatish Balay   Mat_MPISBAIJ   *l = (Mat_MPISBAIJ*)A->data;
1269a30f8f8cSSatish Balay   int            i,ierr,N,*rows,*owners = l->rowners,size = l->size;
1270a30f8f8cSSatish Balay   int            *procs,*nprocs,j,found,idx,nsends,*work,row;
1271a30f8f8cSSatish Balay   int            nmax,*svalues,*starts,*owner,nrecvs,rank = l->rank;
1272a30f8f8cSSatish Balay   int            *rvalues,tag = A->tag,count,base,slen,n,*source;
1273a30f8f8cSSatish Balay   int            *lens,imdex,*lrows,*values,bs=l->bs,rstart_bs=l->rstart_bs;
1274a30f8f8cSSatish Balay   MPI_Comm       comm = A->comm;
1275a30f8f8cSSatish Balay   MPI_Request    *send_waits,*recv_waits;
1276a30f8f8cSSatish Balay   MPI_Status     recv_status,*send_status;
1277a30f8f8cSSatish Balay   IS             istmp;
1278a30f8f8cSSatish Balay 
1279a30f8f8cSSatish Balay   PetscFunctionBegin;
1280a30f8f8cSSatish Balay   ierr = ISGetSize(is,&N);CHKERRQ(ierr);
1281a30f8f8cSSatish Balay   ierr = ISGetIndices(is,&rows);CHKERRQ(ierr);
1282a30f8f8cSSatish Balay 
1283a30f8f8cSSatish Balay   /*  first count number of contributors to each processor */
1284a30f8f8cSSatish Balay   nprocs = (int*)PetscMalloc(2*size*sizeof(int));CHKPTRQ(nprocs);
1285a30f8f8cSSatish Balay   ierr   = PetscMemzero(nprocs,2*size*sizeof(int));CHKERRQ(ierr);
1286a30f8f8cSSatish Balay   procs  = nprocs + size;
1287a30f8f8cSSatish Balay   owner  = (int*)PetscMalloc((N+1)*sizeof(int));CHKPTRQ(owner); /* see note*/
1288a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1289a30f8f8cSSatish Balay     idx   = rows[i];
1290a30f8f8cSSatish Balay     found = 0;
1291a30f8f8cSSatish Balay     for (j=0; j<size; j++) {
1292a30f8f8cSSatish Balay       if (idx >= owners[j]*bs && idx < owners[j+1]*bs) {
1293a30f8f8cSSatish Balay         nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break;
1294a30f8f8cSSatish Balay       }
1295a30f8f8cSSatish Balay     }
1296*29bbc08cSBarry Smith     if (!found) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
1297a30f8f8cSSatish Balay   }
1298a30f8f8cSSatish Balay   nsends = 0;  for (i=0; i<size; i++) { nsends += procs[i];}
1299a30f8f8cSSatish Balay 
1300a30f8f8cSSatish Balay   /* inform other processors of number of messages and max length*/
1301a30f8f8cSSatish Balay   work   = (int*)PetscMalloc(2*size*sizeof(int));CHKPTRQ(work);
1302a30f8f8cSSatish Balay   ierr   = MPI_Allreduce(nprocs,work,2*size,MPI_INT,PetscMaxSum_Op,comm);CHKERRQ(ierr);
1303a30f8f8cSSatish Balay   nmax   = work[rank];
1304a30f8f8cSSatish Balay   nrecvs = work[size+rank];
1305a30f8f8cSSatish Balay   ierr = PetscFree(work);CHKERRQ(ierr);
1306a30f8f8cSSatish Balay 
1307a30f8f8cSSatish Balay   /* post receives:   */
1308a30f8f8cSSatish Balay   rvalues = (int*)PetscMalloc((nrecvs+1)*(nmax+1)*sizeof(int));CHKPTRQ(rvalues);
1309a30f8f8cSSatish Balay   recv_waits = (MPI_Request*)PetscMalloc((nrecvs+1)*sizeof(MPI_Request));CHKPTRQ(recv_waits);
1310a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1311a30f8f8cSSatish Balay     ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPI_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
1312a30f8f8cSSatish Balay   }
1313a30f8f8cSSatish Balay 
1314a30f8f8cSSatish Balay   /* do sends:
1315a30f8f8cSSatish Balay      1) starts[i] gives the starting index in svalues for stuff going to
1316a30f8f8cSSatish Balay      the ith processor
1317a30f8f8cSSatish Balay   */
1318a30f8f8cSSatish Balay   svalues    = (int*)PetscMalloc((N+1)*sizeof(int));CHKPTRQ(svalues);
1319a30f8f8cSSatish Balay   send_waits = (MPI_Request*)PetscMalloc((nsends+1)*sizeof(MPI_Request));CHKPTRQ(send_waits);
1320a30f8f8cSSatish Balay   starts     = (int*)PetscMalloc((size+1)*sizeof(int));CHKPTRQ(starts);
1321a30f8f8cSSatish Balay   starts[0]  = 0;
1322a30f8f8cSSatish Balay   for (i=1; i<size; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1323a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1324a30f8f8cSSatish Balay     svalues[starts[owner[i]]++] = rows[i];
1325a30f8f8cSSatish Balay   }
1326a30f8f8cSSatish Balay   ierr = ISRestoreIndices(is,&rows);CHKERRQ(ierr);
1327a30f8f8cSSatish Balay 
1328a30f8f8cSSatish Balay   starts[0] = 0;
1329a30f8f8cSSatish Balay   for (i=1; i<size+1; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1330a30f8f8cSSatish Balay   count = 0;
1331a30f8f8cSSatish Balay   for (i=0; i<size; i++) {
1332a30f8f8cSSatish Balay     if (procs[i]) {
1333a30f8f8cSSatish Balay       ierr = MPI_Isend(svalues+starts[i],nprocs[i],MPI_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
1334a30f8f8cSSatish Balay     }
1335a30f8f8cSSatish Balay   }
1336a30f8f8cSSatish Balay   ierr = PetscFree(starts);CHKERRQ(ierr);
1337a30f8f8cSSatish Balay 
1338a30f8f8cSSatish Balay   base = owners[rank]*bs;
1339a30f8f8cSSatish Balay 
1340a30f8f8cSSatish Balay   /*  wait on receives */
1341a30f8f8cSSatish Balay   lens   = (int*)PetscMalloc(2*(nrecvs+1)*sizeof(int));CHKPTRQ(lens);
1342a30f8f8cSSatish Balay   source = lens + nrecvs;
1343a30f8f8cSSatish Balay   count  = nrecvs; slen = 0;
1344a30f8f8cSSatish Balay   while (count) {
1345a30f8f8cSSatish Balay     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
1346a30f8f8cSSatish Balay     /* unpack receives into our local space */
1347a30f8f8cSSatish Balay     ierr = MPI_Get_count(&recv_status,MPI_INT,&n);CHKERRQ(ierr);
1348a30f8f8cSSatish Balay     source[imdex]  = recv_status.MPI_SOURCE;
1349a30f8f8cSSatish Balay     lens[imdex]    = n;
1350a30f8f8cSSatish Balay     slen          += n;
1351a30f8f8cSSatish Balay     count--;
1352a30f8f8cSSatish Balay   }
1353a30f8f8cSSatish Balay   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
1354a30f8f8cSSatish Balay 
1355a30f8f8cSSatish Balay   /* move the data into the send scatter */
1356a30f8f8cSSatish Balay   lrows = (int*)PetscMalloc((slen+1)*sizeof(int));CHKPTRQ(lrows);
1357a30f8f8cSSatish Balay   count = 0;
1358a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1359a30f8f8cSSatish Balay     values = rvalues + i*nmax;
1360a30f8f8cSSatish Balay     for (j=0; j<lens[i]; j++) {
1361a30f8f8cSSatish Balay       lrows[count++] = values[j] - base;
1362a30f8f8cSSatish Balay     }
1363a30f8f8cSSatish Balay   }
1364a30f8f8cSSatish Balay   ierr = PetscFree(rvalues);CHKERRQ(ierr);
1365a30f8f8cSSatish Balay   ierr = PetscFree(lens);CHKERRQ(ierr);
1366a30f8f8cSSatish Balay   ierr = PetscFree(owner);CHKERRQ(ierr);
1367a30f8f8cSSatish Balay   ierr = PetscFree(nprocs);CHKERRQ(ierr);
1368a30f8f8cSSatish Balay 
1369a30f8f8cSSatish Balay   /* actually zap the local rows */
1370a30f8f8cSSatish Balay   ierr = ISCreateGeneral(PETSC_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
1371a30f8f8cSSatish Balay   PLogObjectParent(A,istmp);
1372a30f8f8cSSatish Balay 
1373a30f8f8cSSatish Balay   /*
1374a30f8f8cSSatish Balay         Zero the required rows. If the "diagonal block" of the matrix
1375a30f8f8cSSatish Balay      is square and the user wishes to set the diagonal we use seperate
1376a30f8f8cSSatish Balay      code so that MatSetValues() is not called for each diagonal allocating
1377a30f8f8cSSatish Balay      new memory, thus calling lots of mallocs and slowing things down.
1378a30f8f8cSSatish Balay 
1379a30f8f8cSSatish Balay        Contributed by: Mathew Knepley
1380a30f8f8cSSatish Balay   */
1381a30f8f8cSSatish Balay   /* must zero l->B before l->A because the (diag) case below may put values into l->B*/
1382ff64ff16SBarry Smith   ierr = MatZeroRows_SeqBAIJ(l->B,istmp,0);CHKERRQ(ierr);
1383a30f8f8cSSatish Balay   if (diag && (l->A->M == l->A->N)) {
1384a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,diag);CHKERRQ(ierr);
1385a30f8f8cSSatish Balay   } else if (diag) {
1386a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1387a30f8f8cSSatish Balay     if (((Mat_SeqSBAIJ*)l->A->data)->nonew) {
1388*29bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\
1389a30f8f8cSSatish Balay MAT_NO_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR");
1390a30f8f8cSSatish Balay     }
1391a30f8f8cSSatish Balay     for (i=0; i<slen; i++) {
1392a30f8f8cSSatish Balay       row  = lrows[i] + rstart_bs;
1393a30f8f8cSSatish Balay       ierr = MatSetValues(A,1,&row,1,&row,diag,INSERT_VALUES);CHKERRQ(ierr);
1394a30f8f8cSSatish Balay     }
1395a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1396a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1397a30f8f8cSSatish Balay   } else {
1398a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1399a30f8f8cSSatish Balay   }
1400a30f8f8cSSatish Balay 
1401a30f8f8cSSatish Balay   ierr = ISDestroy(istmp);CHKERRQ(ierr);
1402a30f8f8cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
1403a30f8f8cSSatish Balay 
1404a30f8f8cSSatish Balay   /* wait on sends */
1405a30f8f8cSSatish Balay   if (nsends) {
1406a30f8f8cSSatish Balay     send_status = (MPI_Status*)PetscMalloc(nsends*sizeof(MPI_Status));CHKPTRQ(send_status);
1407a30f8f8cSSatish Balay     ierr        = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
1408a30f8f8cSSatish Balay     ierr        = PetscFree(send_status);CHKERRQ(ierr);
1409a30f8f8cSSatish Balay   }
1410a30f8f8cSSatish Balay   ierr = PetscFree(send_waits);CHKERRQ(ierr);
1411a30f8f8cSSatish Balay   ierr = PetscFree(svalues);CHKERRQ(ierr);
1412a30f8f8cSSatish Balay 
1413a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1414a30f8f8cSSatish Balay }
1415a30f8f8cSSatish Balay 
1416a30f8f8cSSatish Balay #undef __FUNC__
1417a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatPrintHelp_MPISBAIJ"
1418a30f8f8cSSatish Balay int MatPrintHelp_MPISBAIJ(Mat A)
1419a30f8f8cSSatish Balay {
1420a30f8f8cSSatish Balay   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1421a30f8f8cSSatish Balay   MPI_Comm    comm = A->comm;
1422a30f8f8cSSatish Balay   static int  called = 0;
1423a30f8f8cSSatish Balay   int         ierr;
1424a30f8f8cSSatish Balay 
1425a30f8f8cSSatish Balay   PetscFunctionBegin;
1426a30f8f8cSSatish Balay   if (!a->rank) {
1427a30f8f8cSSatish Balay     ierr = MatPrintHelp_SeqSBAIJ(a->A);CHKERRQ(ierr);
1428a30f8f8cSSatish Balay   }
1429a30f8f8cSSatish Balay   if (called) {PetscFunctionReturn(0);} else called = 1;
1430a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm," Options for MATMPISBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
1431a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
1432a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1433a30f8f8cSSatish Balay }
1434a30f8f8cSSatish Balay 
1435a30f8f8cSSatish Balay #undef __FUNC__
1436a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatSetUnfactored_MPISBAIJ"
1437a30f8f8cSSatish Balay int MatSetUnfactored_MPISBAIJ(Mat A)
1438a30f8f8cSSatish Balay {
1439f3566a2aSHong Zhang   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1440a30f8f8cSSatish Balay   int         ierr;
1441a30f8f8cSSatish Balay 
1442a30f8f8cSSatish Balay   PetscFunctionBegin;
1443a30f8f8cSSatish Balay   ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
1444a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1445a30f8f8cSSatish Balay }
1446a30f8f8cSSatish Balay 
1447a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat,MatDuplicateOption,Mat *);
1448a30f8f8cSSatish Balay 
1449a30f8f8cSSatish Balay #undef __FUNC__
1450a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatEqual_MPISBAIJ"
1451a30f8f8cSSatish Balay int MatEqual_MPISBAIJ(Mat A,Mat B,PetscTruth *flag)
1452a30f8f8cSSatish Balay {
1453a30f8f8cSSatish Balay   Mat_MPISBAIJ *matB = (Mat_MPISBAIJ*)B->data,*matA = (Mat_MPISBAIJ*)A->data;
1454a30f8f8cSSatish Balay   Mat         a,b,c,d;
1455a30f8f8cSSatish Balay   PetscTruth  flg;
1456a30f8f8cSSatish Balay   int         ierr;
1457a30f8f8cSSatish Balay 
1458a30f8f8cSSatish Balay   PetscFunctionBegin;
1459*29bbc08cSBarry Smith   if (B->type != MATMPISBAIJ) SETERRQ(PETSC_ERR_ARG_INCOMP,"Matrices must be same type");
1460a30f8f8cSSatish Balay   a = matA->A; b = matA->B;
1461a30f8f8cSSatish Balay   c = matB->A; d = matB->B;
1462a30f8f8cSSatish Balay 
1463a30f8f8cSSatish Balay   ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
1464a30f8f8cSSatish Balay   if (flg == PETSC_TRUE) {
1465a30f8f8cSSatish Balay     ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
1466a30f8f8cSSatish Balay   }
1467a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
1468a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1469a30f8f8cSSatish Balay }
1470a30f8f8cSSatish Balay 
1471a30f8f8cSSatish Balay /* -------------------------------------------------------------------*/
1472a30f8f8cSSatish Balay static struct _MatOps MatOps_Values = {
1473a30f8f8cSSatish Balay   MatSetValues_MPISBAIJ,
1474a30f8f8cSSatish Balay   MatGetRow_MPISBAIJ,
1475a30f8f8cSSatish Balay   MatRestoreRow_MPISBAIJ,
1476a30f8f8cSSatish Balay   MatMult_MPISBAIJ,
1477a30f8f8cSSatish Balay   MatMultAdd_MPISBAIJ,
1478a30f8f8cSSatish Balay   MatMultTranspose_MPISBAIJ,
1479a30f8f8cSSatish Balay   MatMultTransposeAdd_MPISBAIJ,
1480a30f8f8cSSatish Balay   0,
1481a30f8f8cSSatish Balay   0,
1482a30f8f8cSSatish Balay   0,
1483a30f8f8cSSatish Balay   0,
1484a30f8f8cSSatish Balay   0,
1485a30f8f8cSSatish Balay   0,
1486a30f8f8cSSatish Balay   0,
1487a30f8f8cSSatish Balay   MatTranspose_MPISBAIJ,
1488a30f8f8cSSatish Balay   MatGetInfo_MPISBAIJ,
1489a30f8f8cSSatish Balay   MatEqual_MPISBAIJ,
1490a30f8f8cSSatish Balay   MatGetDiagonal_MPISBAIJ,
1491a30f8f8cSSatish Balay   MatDiagonalScale_MPISBAIJ,
1492a30f8f8cSSatish Balay   MatNorm_MPISBAIJ,
1493a30f8f8cSSatish Balay   MatAssemblyBegin_MPISBAIJ,
1494a30f8f8cSSatish Balay   MatAssemblyEnd_MPISBAIJ,
1495a30f8f8cSSatish Balay   0,
1496a30f8f8cSSatish Balay   MatSetOption_MPISBAIJ,
1497a30f8f8cSSatish Balay   MatZeroEntries_MPISBAIJ,
1498a30f8f8cSSatish Balay   MatZeroRows_MPISBAIJ,
1499a30f8f8cSSatish Balay   0,
1500a30f8f8cSSatish Balay   0,
1501a30f8f8cSSatish Balay   0,
1502a30f8f8cSSatish Balay   0,
1503a30f8f8cSSatish Balay   MatGetSize_MPISBAIJ,
1504a30f8f8cSSatish Balay   MatGetLocalSize_MPISBAIJ,
1505a30f8f8cSSatish Balay   MatGetOwnershipRange_MPISBAIJ,
1506a30f8f8cSSatish Balay   0,
1507a30f8f8cSSatish Balay   0,
1508a30f8f8cSSatish Balay   0,
1509a30f8f8cSSatish Balay   0,
1510a30f8f8cSSatish Balay   MatDuplicate_MPISBAIJ,
1511a30f8f8cSSatish Balay   0,
1512a30f8f8cSSatish Balay   0,
1513a30f8f8cSSatish Balay   0,
1514a30f8f8cSSatish Balay   0,
1515a30f8f8cSSatish Balay   0,
1516a30f8f8cSSatish Balay   MatGetSubMatrices_MPISBAIJ,
1517a30f8f8cSSatish Balay   MatIncreaseOverlap_MPISBAIJ,
1518a30f8f8cSSatish Balay   MatGetValues_MPISBAIJ,
1519a30f8f8cSSatish Balay   0,
1520a30f8f8cSSatish Balay   MatPrintHelp_MPISBAIJ,
1521a30f8f8cSSatish Balay   MatScale_MPISBAIJ,
1522a30f8f8cSSatish Balay   0,
1523a30f8f8cSSatish Balay   0,
1524a30f8f8cSSatish Balay   0,
1525a30f8f8cSSatish Balay   MatGetBlockSize_MPISBAIJ,
1526a30f8f8cSSatish Balay   0,
1527a30f8f8cSSatish Balay   0,
1528a30f8f8cSSatish Balay   0,
1529a30f8f8cSSatish Balay   0,
1530a30f8f8cSSatish Balay   0,
1531a30f8f8cSSatish Balay   0,
1532a30f8f8cSSatish Balay   MatSetUnfactored_MPISBAIJ,
1533a30f8f8cSSatish Balay   0,
1534a30f8f8cSSatish Balay   MatSetValuesBlocked_MPISBAIJ,
1535a30f8f8cSSatish Balay   0,
1536a30f8f8cSSatish Balay   0,
1537a30f8f8cSSatish Balay   0,
1538a30f8f8cSSatish Balay   MatGetMaps_Petsc};
1539a30f8f8cSSatish Balay 
1540a30f8f8cSSatish Balay 
1541a30f8f8cSSatish Balay EXTERN_C_BEGIN
1542a30f8f8cSSatish Balay #undef __FUNC__
1543a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetDiagonalBlock_MPISBAIJ"
1544a30f8f8cSSatish Balay int MatGetDiagonalBlock_MPISBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
1545a30f8f8cSSatish Balay {
1546a30f8f8cSSatish Balay   PetscFunctionBegin;
1547a30f8f8cSSatish Balay   *a      = ((Mat_MPISBAIJ *)A->data)->A;
1548a30f8f8cSSatish Balay   *iscopy = PETSC_FALSE;
1549a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1550a30f8f8cSSatish Balay }
1551a30f8f8cSSatish Balay EXTERN_C_END
1552a30f8f8cSSatish Balay 
1553a30f8f8cSSatish Balay #undef __FUNC__
1554a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatCreateMPISBAIJ"
1555a30f8f8cSSatish Balay /*@C
1556a30f8f8cSSatish Balay    MatCreateMPISBAIJ - Creates a sparse parallel matrix in symmetric block AIJ format
1557a30f8f8cSSatish Balay    (block compressed row).  For good matrix assembly performance
1558a30f8f8cSSatish Balay    the user should preallocate the matrix storage by setting the parameters
1559a30f8f8cSSatish Balay    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1560a30f8f8cSSatish Balay    performance can be increased by more than a factor of 50.
1561a30f8f8cSSatish Balay 
1562a30f8f8cSSatish Balay    Collective on MPI_Comm
1563a30f8f8cSSatish Balay 
1564a30f8f8cSSatish Balay    Input Parameters:
1565a30f8f8cSSatish Balay +  comm - MPI communicator
1566a30f8f8cSSatish Balay .  bs   - size of blockk
1567a30f8f8cSSatish Balay .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
1568a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1569a30f8f8cSSatish Balay            y vector for the matrix-vector product y = Ax.
1570a30f8f8cSSatish Balay .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
1571a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1572a30f8f8cSSatish Balay            x vector for the matrix-vector product y = Ax.
1573a30f8f8cSSatish Balay .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
1574a30f8f8cSSatish Balay .  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
1575a30f8f8cSSatish Balay .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1576a30f8f8cSSatish Balay            submatrix  (same for all local rows)
1577a30f8f8cSSatish Balay .  d_nnz - array containing the number of block nonzeros in the various block rows
1578a30f8f8cSSatish Balay            of the in diagonal portion of the local (possibly different for each block
1579a30f8f8cSSatish Balay            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1580a30f8f8cSSatish Balay .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1581a30f8f8cSSatish Balay            submatrix (same for all local rows).
1582a30f8f8cSSatish Balay -  o_nnz - array containing the number of nonzeros in the various block rows of the
1583a30f8f8cSSatish Balay            off-diagonal portion of the local submatrix (possibly different for
1584a30f8f8cSSatish Balay            each block row) or PETSC_NULL.
1585a30f8f8cSSatish Balay 
1586a30f8f8cSSatish Balay    Output Parameter:
1587a30f8f8cSSatish Balay .  A - the matrix
1588a30f8f8cSSatish Balay 
1589a30f8f8cSSatish Balay    Options Database Keys:
1590a30f8f8cSSatish Balay .   -mat_no_unroll - uses code that does not unroll the loops in the
1591a30f8f8cSSatish Balay                      block calculations (much slower)
1592a30f8f8cSSatish Balay .   -mat_block_size - size of the blocks to use
1593a30f8f8cSSatish Balay .   -mat_mpi - use the parallel matrix data structures even on one processor
1594a30f8f8cSSatish Balay                (defaults to using SeqBAIJ format on one processor)
1595a30f8f8cSSatish Balay 
1596a30f8f8cSSatish Balay    Notes:
1597a30f8f8cSSatish Balay    The user MUST specify either the local or global matrix dimensions
1598a30f8f8cSSatish Balay    (possibly both).
1599a30f8f8cSSatish Balay 
1600a30f8f8cSSatish Balay    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1601a30f8f8cSSatish Balay    than it must be used on all processors that share the object for that argument.
1602a30f8f8cSSatish Balay 
1603a30f8f8cSSatish Balay    Storage Information:
1604a30f8f8cSSatish Balay    For a square global matrix we define each processor's diagonal portion
1605a30f8f8cSSatish Balay    to be its local rows and the corresponding columns (a square submatrix);
1606a30f8f8cSSatish Balay    each processor's off-diagonal portion encompasses the remainder of the
1607a30f8f8cSSatish Balay    local matrix (a rectangular submatrix).
1608a30f8f8cSSatish Balay 
1609a30f8f8cSSatish Balay    The user can specify preallocated storage for the diagonal part of
1610a30f8f8cSSatish Balay    the local submatrix with either d_nz or d_nnz (not both).  Set
1611a30f8f8cSSatish Balay    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1612a30f8f8cSSatish Balay    memory allocation.  Likewise, specify preallocated storage for the
1613a30f8f8cSSatish Balay    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1614a30f8f8cSSatish Balay 
1615a30f8f8cSSatish Balay    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1616a30f8f8cSSatish Balay    the figure below we depict these three local rows and all columns (0-11).
1617a30f8f8cSSatish Balay 
1618a30f8f8cSSatish Balay .vb
1619a30f8f8cSSatish Balay            0 1 2 3 4 5 6 7 8 9 10 11
1620a30f8f8cSSatish Balay           -------------------
1621a30f8f8cSSatish Balay    row 3  |  o o o d d d o o o o o o
1622a30f8f8cSSatish Balay    row 4  |  o o o d d d o o o o o o
1623a30f8f8cSSatish Balay    row 5  |  o o o d d d o o o o o o
1624a30f8f8cSSatish Balay           -------------------
1625a30f8f8cSSatish Balay .ve
1626a30f8f8cSSatish Balay 
1627a30f8f8cSSatish Balay    Thus, any entries in the d locations are stored in the d (diagonal)
1628a30f8f8cSSatish Balay    submatrix, and any entries in the o locations are stored in the
1629a30f8f8cSSatish Balay    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1630a30f8f8cSSatish Balay    stored simply in the MATSEQBAIJ format for compressed row storage.
1631a30f8f8cSSatish Balay 
1632a30f8f8cSSatish Balay    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1633a30f8f8cSSatish Balay    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1634a30f8f8cSSatish Balay    In general, for PDE problems in which most nonzeros are near the diagonal,
1635a30f8f8cSSatish Balay    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1636a30f8f8cSSatish Balay    or you will get TERRIBLE performance; see the users' manual chapter on
1637a30f8f8cSSatish Balay    matrices.
1638a30f8f8cSSatish Balay 
1639a30f8f8cSSatish Balay    Level: intermediate
1640a30f8f8cSSatish Balay 
1641a30f8f8cSSatish Balay .keywords: matrix, block, aij, compressed row, sparse, parallel
1642a30f8f8cSSatish Balay 
1643a209d233SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1644a30f8f8cSSatish Balay @*/
1645a30f8f8cSSatish Balay 
1646a30f8f8cSSatish Balay int MatCreateMPISBAIJ(MPI_Comm comm,int bs,int m,int n,int M,int N,int d_nz,int *d_nnz,int o_nz,int *o_nnz,Mat *A)
1647a30f8f8cSSatish Balay {
1648a30f8f8cSSatish Balay   Mat          B;
1649a30f8f8cSSatish Balay   Mat_MPISBAIJ  *b;
1650f65c83cfSHong Zhang   int          ierr,i,sum[1],work[1],mbs,Mbs=PETSC_DECIDE,size;
1651a30f8f8cSSatish Balay   PetscTruth   flag1,flag2,flg;
1652a30f8f8cSSatish Balay 
1653a30f8f8cSSatish Balay   PetscFunctionBegin;
1654a30f8f8cSSatish Balay   if (M != N || m != n){ /* N and n are not used after this */
1655*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, set M=N and m=n");
1656a30f8f8cSSatish Balay   }
1657a30f8f8cSSatish Balay   ierr = OptionsGetInt(PETSC_NULL,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1658a30f8f8cSSatish Balay 
1659*29bbc08cSBarry Smith   if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
1660*29bbc08cSBarry Smith   if (d_nz < -2) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than -2: value %d",d_nz);
1661*29bbc08cSBarry Smith   if (o_nz < -2) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than -2: value %d",o_nz);
1662a30f8f8cSSatish Balay   if (d_nnz) {
1663a30f8f8cSSatish Balay     for (i=0; i<m/bs; i++) {
1664*29bbc08cSBarry Smith       if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %d value %d",i,d_nnz[i]);
1665a30f8f8cSSatish Balay     }
1666a30f8f8cSSatish Balay   }
1667a30f8f8cSSatish Balay   if (o_nnz) {
1668a30f8f8cSSatish Balay     for (i=0; i<m/bs; i++) {
1669*29bbc08cSBarry Smith       if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %d value %d",i,o_nnz[i]);
1670a30f8f8cSSatish Balay     }
1671a30f8f8cSSatish Balay   }
1672a30f8f8cSSatish Balay 
1673a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1674a30f8f8cSSatish Balay   ierr = OptionsHasName(PETSC_NULL,"-mat_mpisbaij",&flag1);CHKERRQ(ierr);
1675a30f8f8cSSatish Balay   ierr = OptionsHasName(PETSC_NULL,"-mat_mpi",&flag2);CHKERRQ(ierr);
1676a30f8f8cSSatish Balay   if (!flag1 && !flag2 && size == 1) {
1677a30f8f8cSSatish Balay     if (M == PETSC_DECIDE) M = m;
1678a30f8f8cSSatish Balay     ierr = MatCreateSeqSBAIJ(comm,bs,M,M,d_nz,d_nnz,A);CHKERRQ(ierr);
1679a30f8f8cSSatish Balay     PetscFunctionReturn(0);
1680a30f8f8cSSatish Balay   }
1681a30f8f8cSSatish Balay 
1682a30f8f8cSSatish Balay   *A = 0;
1683a30f8f8cSSatish Balay   PetscHeaderCreate(B,_p_Mat,struct _MatOps,MAT_COOKIE,MATMPISBAIJ,"Mat",comm,MatDestroy,MatView);
1684a30f8f8cSSatish Balay   PLogObjectCreate(B);
1685a30f8f8cSSatish Balay   B->data = (void*)(b = PetscNew(Mat_MPISBAIJ));CHKPTRQ(b);
1686a30f8f8cSSatish Balay   ierr    = PetscMemzero(b,sizeof(Mat_MPISBAIJ));CHKERRQ(ierr);
1687a30f8f8cSSatish Balay   ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1688a30f8f8cSSatish Balay 
1689a30f8f8cSSatish Balay   B->ops->destroy    = MatDestroy_MPISBAIJ;
1690a30f8f8cSSatish Balay   B->ops->view       = MatView_MPISBAIJ;
1691a30f8f8cSSatish Balay   B->mapping    = 0;
1692a30f8f8cSSatish Balay   B->factor     = 0;
1693a30f8f8cSSatish Balay   B->assembled  = PETSC_FALSE;
1694a30f8f8cSSatish Balay 
1695a30f8f8cSSatish Balay   B->insertmode = NOT_SET_VALUES;
1696a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(comm,&b->rank);CHKERRQ(ierr);
1697a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&b->size);CHKERRQ(ierr);
1698a30f8f8cSSatish Balay 
1699a30f8f8cSSatish Balay   if (m == PETSC_DECIDE && (d_nnz || o_nnz)) {
1700*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Cannot have PETSC_DECIDE rows but set d_nnz or o_nnz");
1701a30f8f8cSSatish Balay   }
1702a30f8f8cSSatish Balay   if (M == PETSC_DECIDE && m == PETSC_DECIDE) {
1703*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"either M or m should be specified");
1704a30f8f8cSSatish Balay   }
1705a30f8f8cSSatish Balay   if (M != PETSC_DECIDE && m != PETSC_DECIDE) M = PETSC_DECIDE;
1706a30f8f8cSSatish Balay 
1707a30f8f8cSSatish Balay   if (M == PETSC_DECIDE) {
1708a30f8f8cSSatish Balay     work[0] = m; mbs = m/bs;
1709a30f8f8cSSatish Balay     ierr = MPI_Allreduce(work,sum,1,MPI_INT,MPI_SUM,comm);CHKERRQ(ierr);
1710a30f8f8cSSatish Balay     M = sum[0]; Mbs = M/bs;
1711a30f8f8cSSatish Balay   } else { /* M is specified */
1712a30f8f8cSSatish Balay     Mbs = M/bs;
1713*29bbc08cSBarry Smith     if (Mbs*bs != M) SETERRQ(PETSC_ERR_ARG_SIZ,"No of global rows must be divisible by blocksize");
1714a30f8f8cSSatish Balay     mbs = Mbs/b->size + ((Mbs % b->size) > b->rank);
1715a30f8f8cSSatish Balay     m   = mbs*bs;
1716a30f8f8cSSatish Balay   }
1717a30f8f8cSSatish Balay 
1718a30f8f8cSSatish Balay   if (mbs*bs != m) {
1719*29bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"No of local rows/cols must be divisible by blocksize");
1720a30f8f8cSSatish Balay   }
1721a30f8f8cSSatish Balay 
1722a30f8f8cSSatish Balay   b->m = m; B->m = m;
1723a30f8f8cSSatish Balay   b->n = m; B->n = m;
1724a30f8f8cSSatish Balay   b->N = M; B->N = M;
1725a30f8f8cSSatish Balay   b->M = M;
1726a30f8f8cSSatish Balay   B->M = M;
1727a30f8f8cSSatish Balay   b->bs  = bs;
1728a30f8f8cSSatish Balay   b->bs2 = bs*bs;
1729a30f8f8cSSatish Balay   b->mbs = mbs;
1730a30f8f8cSSatish Balay   b->nbs = mbs;
1731a30f8f8cSSatish Balay   b->Mbs = Mbs;
1732a30f8f8cSSatish Balay   b->Nbs = Mbs;
1733a30f8f8cSSatish Balay 
1734a30f8f8cSSatish Balay   /* the information in the maps duplicates the information computed below, eventually
1735a30f8f8cSSatish Balay      we should remove the duplicate information that is not contained in the maps */
1736a30f8f8cSSatish Balay   ierr = MapCreateMPI(B->comm,m,M,&B->rmap);CHKERRQ(ierr);
1737a30f8f8cSSatish Balay   ierr = MapCreateMPI(B->comm,m,M,&B->cmap);CHKERRQ(ierr);
1738a30f8f8cSSatish Balay 
1739a30f8f8cSSatish Balay   /* build local table of row and column ownerships */
1740a30f8f8cSSatish Balay   b->rowners = (int*)PetscMalloc(3*(b->size+2)*sizeof(int));CHKPTRQ(b->rowners);
1741a30f8f8cSSatish Balay   PLogObjectMemory(B,3*(b->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1742a30f8f8cSSatish Balay   b->cowners    = b->rowners + b->size + 2;
1743a30f8f8cSSatish Balay   b->rowners_bs = b->cowners + b->size + 2;
1744a30f8f8cSSatish Balay   ierr = MPI_Allgather(&mbs,1,MPI_INT,b->rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
1745a30f8f8cSSatish Balay   b->rowners[0]    = 0;
1746a30f8f8cSSatish Balay   for (i=2; i<=b->size; i++) {
1747a30f8f8cSSatish Balay     b->rowners[i] += b->rowners[i-1];
1748a30f8f8cSSatish Balay   }
1749a30f8f8cSSatish Balay   for (i=0; i<=b->size; i++) {
1750a30f8f8cSSatish Balay     b->rowners_bs[i] = b->rowners[i]*bs;
1751a30f8f8cSSatish Balay   }
1752a30f8f8cSSatish Balay   b->rstart    = b->rowners[b->rank];
1753a30f8f8cSSatish Balay   b->rend      = b->rowners[b->rank+1];
1754a30f8f8cSSatish Balay   b->rstart_bs = b->rstart * bs;
1755a30f8f8cSSatish Balay   b->rend_bs   = b->rend * bs;
1756a30f8f8cSSatish Balay 
1757a30f8f8cSSatish Balay   b->cstart    = b->rstart;
1758a30f8f8cSSatish Balay   b->cend      = b->rend;
1759a30f8f8cSSatish Balay   b->cstart_bs = b->cstart * bs;
1760a30f8f8cSSatish Balay   b->cend_bs   = b->cend * bs;
1761a30f8f8cSSatish Balay 
1762a30f8f8cSSatish Balay 
1763a30f8f8cSSatish Balay   if (d_nz == PETSC_DEFAULT) d_nz = 5;
1764a30f8f8cSSatish Balay   ierr = MatCreateSeqSBAIJ(PETSC_COMM_SELF,bs,m,m,d_nz,d_nnz,&b->A);CHKERRQ(ierr);
1765a30f8f8cSSatish Balay   PLogObjectParent(B,b->A);
1766a30f8f8cSSatish Balay   if (o_nz == PETSC_DEFAULT) o_nz = 0;
1767a30f8f8cSSatish Balay   ierr = MatCreateSeqBAIJ(PETSC_COMM_SELF,bs,m,M,o_nz,o_nnz,&b->B);CHKERRQ(ierr);
1768a30f8f8cSSatish Balay   PLogObjectParent(B,b->B);
1769a30f8f8cSSatish Balay 
1770a30f8f8cSSatish Balay   /* build cache for off array entries formed */
1771a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
1772a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);
1773a30f8f8cSSatish Balay   b->donotstash  = PETSC_FALSE;
1774a30f8f8cSSatish Balay   b->colmap      = PETSC_NULL;
1775a30f8f8cSSatish Balay   b->garray      = PETSC_NULL;
1776a30f8f8cSSatish Balay   b->roworiented = PETSC_TRUE;
1777a30f8f8cSSatish Balay 
1778a30f8f8cSSatish Balay #if defined(PEYSC_USE_MAT_SINGLE)
1779a30f8f8cSSatish Balay   /* stuff for MatSetValues_XXX in single precision */
1780a30f8f8cSSatish Balay   b->lensetvalues     = 0;
1781a30f8f8cSSatish Balay   b->setvaluescopy    = PETSC_NULL;
1782a30f8f8cSSatish Balay #endif
1783a30f8f8cSSatish Balay 
1784a30f8f8cSSatish Balay   /* stuff used in block assembly */
1785a30f8f8cSSatish Balay   b->barray       = 0;
1786a30f8f8cSSatish Balay 
1787a30f8f8cSSatish Balay   /* stuff used for matrix vector multiply */
1788a30f8f8cSSatish Balay   b->lvec         = 0;
1789a30f8f8cSSatish Balay   b->Mvctx        = 0;
1790a30f8f8cSSatish Balay 
1791a30f8f8cSSatish Balay   /* stuff for MatGetRow() */
1792a30f8f8cSSatish Balay   b->rowindices   = 0;
1793a30f8f8cSSatish Balay   b->rowvalues    = 0;
1794a30f8f8cSSatish Balay   b->getrowactive = PETSC_FALSE;
1795a30f8f8cSSatish Balay 
1796a30f8f8cSSatish Balay   /* hash table stuff */
1797a30f8f8cSSatish Balay   b->ht           = 0;
1798a30f8f8cSSatish Balay   b->hd           = 0;
1799a30f8f8cSSatish Balay   b->ht_size      = 0;
1800a30f8f8cSSatish Balay   b->ht_flag      = PETSC_FALSE;
1801a30f8f8cSSatish Balay   b->ht_fact      = 0;
1802a30f8f8cSSatish Balay   b->ht_total_ct  = 0;
1803a30f8f8cSSatish Balay   b->ht_insert_ct = 0;
1804a30f8f8cSSatish Balay 
1805a30f8f8cSSatish Balay   *A = B;
1806a30f8f8cSSatish Balay   ierr = OptionsHasName(PETSC_NULL,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
1807a30f8f8cSSatish Balay   if (flg) {
1808a30f8f8cSSatish Balay     double fact = 1.39;
1809a30f8f8cSSatish Balay     ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
1810a30f8f8cSSatish Balay     ierr = OptionsGetDouble(PETSC_NULL,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
1811a30f8f8cSSatish Balay     if (fact <= 1.0) fact = 1.39;
1812a30f8f8cSSatish Balay     ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
1813a30f8f8cSSatish Balay     PLogInfo(0,"MatCreateMPISBAIJ:Hash table Factor used %5.2f\n",fact);
1814a30f8f8cSSatish Balay   }
1815a30f8f8cSSatish Balay   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
1816a30f8f8cSSatish Balay                                      "MatStoreValues_MPISBAIJ",
1817a30f8f8cSSatish Balay                                      MatStoreValues_MPISBAIJ);CHKERRQ(ierr);
1818a30f8f8cSSatish Balay   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
1819a30f8f8cSSatish Balay                                      "MatRetrieveValues_MPISBAIJ",
1820a30f8f8cSSatish Balay                                      MatRetrieveValues_MPISBAIJ);CHKERRQ(ierr);
1821a30f8f8cSSatish Balay   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
1822a30f8f8cSSatish Balay                                      "MatGetDiagonalBlock_MPISBAIJ",
1823a30f8f8cSSatish Balay                                      MatGetDiagonalBlock_MPISBAIJ);CHKERRQ(ierr);
1824a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1825a30f8f8cSSatish Balay }
1826a30f8f8cSSatish Balay 
1827a30f8f8cSSatish Balay 
1828a30f8f8cSSatish Balay #undef __FUNC__
1829a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatDuplicate_MPISBAIJ"
1830a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
1831a30f8f8cSSatish Balay {
1832a30f8f8cSSatish Balay   Mat         mat;
1833a30f8f8cSSatish Balay   Mat_MPISBAIJ *a,*oldmat = (Mat_MPISBAIJ*)matin->data;
1834a30f8f8cSSatish Balay   int         ierr,len=0;
1835a30f8f8cSSatish Balay   PetscTruth  flg;
1836a30f8f8cSSatish Balay 
1837a30f8f8cSSatish Balay   PetscFunctionBegin;
1838a30f8f8cSSatish Balay   *newmat       = 0;
1839a30f8f8cSSatish Balay   PetscHeaderCreate(mat,_p_Mat,struct _MatOps,MAT_COOKIE,MATMPISBAIJ,"Mat",matin->comm,MatDestroy,MatView);
1840a30f8f8cSSatish Balay   PLogObjectCreate(mat);
1841a30f8f8cSSatish Balay   mat->data         = (void*)(a = PetscNew(Mat_MPISBAIJ));CHKPTRQ(a);
1842a30f8f8cSSatish Balay   ierr              = PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1843a30f8f8cSSatish Balay   mat->ops->destroy = MatDestroy_MPISBAIJ;
1844a30f8f8cSSatish Balay   mat->ops->view    = MatView_MPISBAIJ;
1845a30f8f8cSSatish Balay   mat->factor       = matin->factor;
1846a30f8f8cSSatish Balay   mat->assembled    = PETSC_TRUE;
1847a30f8f8cSSatish Balay   mat->insertmode   = NOT_SET_VALUES;
1848a30f8f8cSSatish Balay 
1849a30f8f8cSSatish Balay   a->m = mat->m   = oldmat->m;
1850a30f8f8cSSatish Balay   a->n = mat->n   = oldmat->n;
1851a30f8f8cSSatish Balay   a->M = mat->M   = oldmat->M;
1852a30f8f8cSSatish Balay   a->N = mat->N   = oldmat->N;
1853a30f8f8cSSatish Balay 
1854a30f8f8cSSatish Balay   a->bs  = oldmat->bs;
1855a30f8f8cSSatish Balay   a->bs2 = oldmat->bs2;
1856a30f8f8cSSatish Balay   a->mbs = oldmat->mbs;
1857a30f8f8cSSatish Balay   a->nbs = oldmat->nbs;
1858a30f8f8cSSatish Balay   a->Mbs = oldmat->Mbs;
1859a30f8f8cSSatish Balay   a->Nbs = oldmat->Nbs;
1860a30f8f8cSSatish Balay 
1861a30f8f8cSSatish Balay   a->rstart       = oldmat->rstart;
1862a30f8f8cSSatish Balay   a->rend         = oldmat->rend;
1863a30f8f8cSSatish Balay   a->cstart       = oldmat->cstart;
1864a30f8f8cSSatish Balay   a->cend         = oldmat->cend;
1865a30f8f8cSSatish Balay   a->size         = oldmat->size;
1866a30f8f8cSSatish Balay   a->rank         = oldmat->rank;
1867a30f8f8cSSatish Balay   a->donotstash   = oldmat->donotstash;
1868a30f8f8cSSatish Balay   a->roworiented  = oldmat->roworiented;
1869a30f8f8cSSatish Balay   a->rowindices   = 0;
1870a30f8f8cSSatish Balay   a->rowvalues    = 0;
1871a30f8f8cSSatish Balay   a->getrowactive = PETSC_FALSE;
1872a30f8f8cSSatish Balay   a->barray       = 0;
1873a30f8f8cSSatish Balay   a->rstart_bs    = oldmat->rstart_bs;
1874a30f8f8cSSatish Balay   a->rend_bs      = oldmat->rend_bs;
1875a30f8f8cSSatish Balay   a->cstart_bs    = oldmat->cstart_bs;
1876a30f8f8cSSatish Balay   a->cend_bs      = oldmat->cend_bs;
1877a30f8f8cSSatish Balay 
1878a30f8f8cSSatish Balay   /* hash table stuff */
1879a30f8f8cSSatish Balay   a->ht           = 0;
1880a30f8f8cSSatish Balay   a->hd           = 0;
1881a30f8f8cSSatish Balay   a->ht_size      = 0;
1882a30f8f8cSSatish Balay   a->ht_flag      = oldmat->ht_flag;
1883a30f8f8cSSatish Balay   a->ht_fact      = oldmat->ht_fact;
1884a30f8f8cSSatish Balay   a->ht_total_ct  = 0;
1885a30f8f8cSSatish Balay   a->ht_insert_ct = 0;
1886a30f8f8cSSatish Balay 
1887a30f8f8cSSatish Balay 
1888a30f8f8cSSatish Balay   a->rowners = (int*)PetscMalloc(3*(a->size+2)*sizeof(int));CHKPTRQ(a->rowners);
1889a30f8f8cSSatish Balay   PLogObjectMemory(mat,3*(a->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1890a30f8f8cSSatish Balay   a->cowners    = a->rowners + a->size + 2;
1891a30f8f8cSSatish Balay   a->rowners_bs = a->cowners + a->size + 2;
1892a30f8f8cSSatish Balay   ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(int));CHKERRQ(ierr);
1893a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
1894a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,oldmat->bs,&mat->bstash);CHKERRQ(ierr);
1895a30f8f8cSSatish Balay   if (oldmat->colmap) {
1896a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
1897a30f8f8cSSatish Balay   ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
1898a30f8f8cSSatish Balay #else
1899a30f8f8cSSatish Balay     a->colmap = (int*)PetscMalloc((a->Nbs)*sizeof(int));CHKPTRQ(a->colmap);
1900a30f8f8cSSatish Balay     PLogObjectMemory(mat,(a->Nbs)*sizeof(int));
1901a30f8f8cSSatish Balay     ierr      = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(int));CHKERRQ(ierr);
1902a30f8f8cSSatish Balay #endif
1903a30f8f8cSSatish Balay   } else a->colmap = 0;
1904a30f8f8cSSatish Balay   if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
1905a30f8f8cSSatish Balay     a->garray = (int*)PetscMalloc(len*sizeof(int));CHKPTRQ(a->garray);
1906a30f8f8cSSatish Balay     PLogObjectMemory(mat,len*sizeof(int));
1907a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));CHKERRQ(ierr);
1908a30f8f8cSSatish Balay   } else a->garray = 0;
1909a30f8f8cSSatish Balay 
1910a30f8f8cSSatish Balay   ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
1911a30f8f8cSSatish Balay   PLogObjectParent(mat,a->lvec);
1912a30f8f8cSSatish Balay   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
1913a30f8f8cSSatish Balay 
1914a30f8f8cSSatish Balay   PLogObjectParent(mat,a->Mvctx);
1915a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
1916a30f8f8cSSatish Balay   PLogObjectParent(mat,a->A);
1917a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
1918a30f8f8cSSatish Balay   PLogObjectParent(mat,a->B);
1919a30f8f8cSSatish Balay   ierr = OptionsHasName(PETSC_NULL,"-help",&flg);CHKERRQ(ierr);
1920a30f8f8cSSatish Balay   ierr = FListDuplicate(mat->qlist,&matin->qlist);CHKERRQ(ierr);
1921a30f8f8cSSatish Balay   if (flg) {
1922a30f8f8cSSatish Balay     ierr = MatPrintHelp(mat);CHKERRQ(ierr);
1923a30f8f8cSSatish Balay   }
1924a30f8f8cSSatish Balay   *newmat = mat;
1925a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1926a30f8f8cSSatish Balay }
1927a30f8f8cSSatish Balay 
1928a30f8f8cSSatish Balay #include "petscsys.h"
1929a30f8f8cSSatish Balay 
1930a30f8f8cSSatish Balay #undef __FUNC__
1931a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatLoad_MPISBAIJ"
1932a30f8f8cSSatish Balay int MatLoad_MPISBAIJ(Viewer viewer,MatType type,Mat *newmat)
1933a30f8f8cSSatish Balay {
1934a30f8f8cSSatish Balay   Mat          A;
1935a30f8f8cSSatish Balay   int          i,nz,ierr,j,rstart,rend,fd;
1936a30f8f8cSSatish Balay   Scalar       *vals,*buf;
1937a30f8f8cSSatish Balay   MPI_Comm     comm = ((PetscObject)viewer)->comm;
1938a30f8f8cSSatish Balay   MPI_Status   status;
1939a30f8f8cSSatish Balay   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,*browners,maxnz,*cols;
1940a30f8f8cSSatish Balay   int          *locrowlens,*sndcounts = 0,*procsnz = 0,jj,*mycols,*ibuf;
1941a30f8f8cSSatish Balay   int          tag = ((PetscObject)viewer)->tag,bs=1,Mbs,mbs,extra_rows;
1942a30f8f8cSSatish Balay   int          *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
1943a30f8f8cSSatish Balay   int          dcount,kmax,k,nzcount,tmp;
1944a30f8f8cSSatish Balay 
1945a30f8f8cSSatish Balay   PetscFunctionBegin;
1946a30f8f8cSSatish Balay   ierr = OptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1947a30f8f8cSSatish Balay 
1948a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1949a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
1950a30f8f8cSSatish Balay   if (!rank) {
1951a30f8f8cSSatish Balay     ierr = ViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
1952a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
1953*29bbc08cSBarry Smith     if (header[0] != MAT_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
1954a30f8f8cSSatish Balay     if (header[3] < 0) {
1955*29bbc08cSBarry Smith       SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format, cannot load as MPISBAIJ");
1956a30f8f8cSSatish Balay     }
1957a30f8f8cSSatish Balay   }
1958a30f8f8cSSatish Balay 
1959a30f8f8cSSatish Balay   ierr = MPI_Bcast(header+1,3,MPI_INT,0,comm);CHKERRQ(ierr);
1960a30f8f8cSSatish Balay   M = header[1]; N = header[2];
1961a30f8f8cSSatish Balay 
1962*29bbc08cSBarry Smith   if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");
1963a30f8f8cSSatish Balay 
1964a30f8f8cSSatish Balay   /*
1965a30f8f8cSSatish Balay      This code adds extra rows to make sure the number of rows is
1966a30f8f8cSSatish Balay      divisible by the blocksize
1967a30f8f8cSSatish Balay   */
1968a30f8f8cSSatish Balay   Mbs        = M/bs;
1969a30f8f8cSSatish Balay   extra_rows = bs - M + bs*(Mbs);
1970a30f8f8cSSatish Balay   if (extra_rows == bs) extra_rows = 0;
1971a30f8f8cSSatish Balay   else                  Mbs++;
1972a30f8f8cSSatish Balay   if (extra_rows &&!rank) {
1973a30f8f8cSSatish Balay     PLogInfo(0,"MatLoad_MPISBAIJ:Padding loaded matrix to match blocksize\n");
1974a30f8f8cSSatish Balay   }
1975a30f8f8cSSatish Balay 
1976a30f8f8cSSatish Balay   /* determine ownership of all rows */
1977a30f8f8cSSatish Balay   mbs = Mbs/size + ((Mbs % size) > rank);
1978a30f8f8cSSatish Balay   m   = mbs * bs;
1979a30f8f8cSSatish Balay   rowners = (int*)PetscMalloc(2*(size+2)*sizeof(int));CHKPTRQ(rowners);
1980a30f8f8cSSatish Balay   browners = rowners + size + 1;
1981a30f8f8cSSatish Balay   ierr = MPI_Allgather(&mbs,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
1982a30f8f8cSSatish Balay   rowners[0] = 0;
1983a30f8f8cSSatish Balay   for (i=2; i<=size; i++) rowners[i] += rowners[i-1];
1984a30f8f8cSSatish Balay   for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
1985a30f8f8cSSatish Balay   rstart = rowners[rank];
1986a30f8f8cSSatish Balay   rend   = rowners[rank+1];
1987a30f8f8cSSatish Balay 
1988a30f8f8cSSatish Balay   /* distribute row lengths to all processors */
1989a30f8f8cSSatish Balay   locrowlens = (int*)PetscMalloc((rend-rstart)*bs*sizeof(int));CHKPTRQ(locrowlens);
1990a30f8f8cSSatish Balay   if (!rank) {
1991a30f8f8cSSatish Balay     rowlengths = (int*)PetscMalloc((M+extra_rows)*sizeof(int));CHKPTRQ(rowlengths);
1992a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
1993a30f8f8cSSatish Balay     for (i=0; i<extra_rows; i++) rowlengths[M+i] = 1;
1994a30f8f8cSSatish Balay     sndcounts = (int*)PetscMalloc(size*sizeof(int));CHKPTRQ(sndcounts);
1995a30f8f8cSSatish Balay     for (i=0; i<size; i++) sndcounts[i] = browners[i+1] - browners[i];
1996a30f8f8cSSatish Balay     ierr = MPI_Scatterv(rowlengths,sndcounts,browners,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
1997a30f8f8cSSatish Balay     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
1998a30f8f8cSSatish Balay   } else {
1999a30f8f8cSSatish Balay     ierr = MPI_Scatterv(0,0,0,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2000a30f8f8cSSatish Balay   }
2001a30f8f8cSSatish Balay 
20020222edb1SHong Zhang   if (!rank) {   /* procs[0] */
2003a30f8f8cSSatish Balay     /* calculate the number of nonzeros on each processor */
2004a30f8f8cSSatish Balay     procsnz = (int*)PetscMalloc(size*sizeof(int));CHKPTRQ(procsnz);
2005a30f8f8cSSatish Balay     ierr    = PetscMemzero(procsnz,size*sizeof(int));CHKERRQ(ierr);
2006a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2007a30f8f8cSSatish Balay       for (j=rowners[i]*bs; j< rowners[i+1]*bs; j++) {
2008a30f8f8cSSatish Balay         procsnz[i] += rowlengths[j];
2009a30f8f8cSSatish Balay       }
2010a30f8f8cSSatish Balay     }
2011a30f8f8cSSatish Balay     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
2012a30f8f8cSSatish Balay 
2013a30f8f8cSSatish Balay     /* determine max buffer needed and allocate it */
2014a30f8f8cSSatish Balay     maxnz = 0;
2015a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2016a30f8f8cSSatish Balay       maxnz = PetscMax(maxnz,procsnz[i]);
2017a30f8f8cSSatish Balay     }
2018a30f8f8cSSatish Balay     cols = (int*)PetscMalloc(maxnz*sizeof(int));CHKPTRQ(cols);
2019a30f8f8cSSatish Balay 
2020a30f8f8cSSatish Balay     /* read in my part of the matrix column indices  */
2021a30f8f8cSSatish Balay     nz = procsnz[0];
2022a30f8f8cSSatish Balay     ibuf = (int*)PetscMalloc(nz*sizeof(int));CHKPTRQ(ibuf);
2023a30f8f8cSSatish Balay     mycols = ibuf;
2024a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2025a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
2026a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }
2027a30f8f8cSSatish Balay 
2028a30f8f8cSSatish Balay     /* read in every ones (except the last) and ship off */
2029a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2030a30f8f8cSSatish Balay       nz   = procsnz[i];
2031a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2032a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz,MPI_INT,i,tag,comm);CHKERRQ(ierr);
2033a30f8f8cSSatish Balay     }
2034a30f8f8cSSatish Balay     /* read in the stuff for the last proc */
2035a30f8f8cSSatish Balay     if (size != 1) {
2036a30f8f8cSSatish Balay       nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
2037a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2038a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
2039a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz+extra_rows,MPI_INT,size-1,tag,comm);CHKERRQ(ierr);
2040a30f8f8cSSatish Balay     }
2041a30f8f8cSSatish Balay     ierr = PetscFree(cols);CHKERRQ(ierr);
20420222edb1SHong Zhang   } else {  /* procs[i], i>0 */
2043a30f8f8cSSatish Balay     /* determine buffer space needed for message */
2044a30f8f8cSSatish Balay     nz = 0;
2045a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2046a30f8f8cSSatish Balay       nz += locrowlens[i];
2047a30f8f8cSSatish Balay     }
2048a30f8f8cSSatish Balay     ibuf   = (int*)PetscMalloc(nz*sizeof(int));CHKPTRQ(ibuf);
2049a30f8f8cSSatish Balay     mycols = ibuf;
2050a30f8f8cSSatish Balay     /* receive message of column indices*/
2051a30f8f8cSSatish Balay     ierr = MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);CHKERRQ(ierr);
2052a30f8f8cSSatish Balay     ierr = MPI_Get_count(&status,MPI_INT,&maxnz);CHKERRQ(ierr);
2053*29bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2054a30f8f8cSSatish Balay   }
2055a30f8f8cSSatish Balay 
2056a30f8f8cSSatish Balay   /* loop over local rows, determining number of off diagonal entries */
2057a30f8f8cSSatish Balay   dlens  = (int*)PetscMalloc(2*(rend-rstart+1)*sizeof(int));CHKPTRQ(dlens);
2058a30f8f8cSSatish Balay   odlens = dlens + (rend-rstart);
2059a30f8f8cSSatish Balay   mask   = (int*)PetscMalloc(3*Mbs*sizeof(int));CHKPTRQ(mask);
2060a30f8f8cSSatish Balay   ierr   = PetscMemzero(mask,3*Mbs*sizeof(int));CHKERRQ(ierr);
2061a30f8f8cSSatish Balay   masked1 = mask    + Mbs;
2062a30f8f8cSSatish Balay   masked2 = masked1 + Mbs;
2063a30f8f8cSSatish Balay   rowcount = 0; nzcount = 0;
2064a30f8f8cSSatish Balay   for (i=0; i<mbs; i++) {
2065a30f8f8cSSatish Balay     dcount  = 0;
2066a30f8f8cSSatish Balay     odcount = 0;
2067a30f8f8cSSatish Balay     for (j=0; j<bs; j++) {
2068a30f8f8cSSatish Balay       kmax = locrowlens[rowcount];
2069a30f8f8cSSatish Balay       for (k=0; k<kmax; k++) {
20700222edb1SHong Zhang         tmp = mycols[nzcount++]/bs; /* block col. index */
2071a30f8f8cSSatish Balay         if (!mask[tmp]) {
2072a30f8f8cSSatish Balay           mask[tmp] = 1;
20730222edb1SHong Zhang           if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp; /* entry in off-diag portion */
20740222edb1SHong Zhang           else masked1[dcount++] = tmp; /* entry in diag portion */
2075a30f8f8cSSatish Balay         }
2076a30f8f8cSSatish Balay       }
2077a30f8f8cSSatish Balay       rowcount++;
2078a30f8f8cSSatish Balay     }
2079a30f8f8cSSatish Balay 
20800222edb1SHong Zhang     dlens[i]  = dcount;  /* d_nzz[i] */
20810222edb1SHong Zhang     odlens[i] = odcount; /* o_nzz[i] */
2082a30f8f8cSSatish Balay 
2083a30f8f8cSSatish Balay     /* zero out the mask elements we set */
2084a30f8f8cSSatish Balay     for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
2085a30f8f8cSSatish Balay     for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
2086a30f8f8cSSatish Balay   }
2087a30f8f8cSSatish Balay 
2088a30f8f8cSSatish Balay   /* create our matrix */
20897e06b45fSHong Zhang   ierr = MatCreateMPISBAIJ(comm,bs,m,m,PETSC_DETERMINE,PETSC_DETERMINE,0,dlens,0,odlens,newmat);
2090bfe19f1aSHong Zhang   CHKERRQ(ierr);
2091a30f8f8cSSatish Balay   A = *newmat;
2092a30f8f8cSSatish Balay   MatSetOption(A,MAT_COLUMNS_SORTED);
2093a30f8f8cSSatish Balay 
2094a30f8f8cSSatish Balay   if (!rank) {
2095a30f8f8cSSatish Balay     buf = (Scalar*)PetscMalloc(maxnz*sizeof(Scalar));CHKPTRQ(buf);
2096a30f8f8cSSatish Balay     /* read in my part of the matrix numerical values  */
2097a30f8f8cSSatish Balay     nz = procsnz[0];
2098a30f8f8cSSatish Balay     vals = buf;
2099a30f8f8cSSatish Balay     mycols = ibuf;
2100a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2101a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2102a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }
2103a30f8f8cSSatish Balay 
2104a30f8f8cSSatish Balay     /* insert into matrix */
2105a30f8f8cSSatish Balay     jj      = rstart*bs;
2106a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
21077e06b45fSHong Zhang       ierr = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2108a30f8f8cSSatish Balay       mycols += locrowlens[i];
2109a30f8f8cSSatish Balay       vals   += locrowlens[i];
2110a30f8f8cSSatish Balay       jj++;
2111a30f8f8cSSatish Balay     }
21127e06b45fSHong Zhang 
2113a30f8f8cSSatish Balay     /* read in other processors (except the last one) and ship out */
2114a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2115a30f8f8cSSatish Balay       nz   = procsnz[i];
2116a30f8f8cSSatish Balay       vals = buf;
2117a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2118a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
2119a30f8f8cSSatish Balay     }
2120a30f8f8cSSatish Balay     /* the last proc */
2121a30f8f8cSSatish Balay     if (size != 1){
2122a30f8f8cSSatish Balay       nz   = procsnz[i] - extra_rows;
2123a30f8f8cSSatish Balay       vals = buf;
2124a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2125a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
2126a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
2127a30f8f8cSSatish Balay     }
2128a30f8f8cSSatish Balay     ierr = PetscFree(procsnz);CHKERRQ(ierr);
21297e06b45fSHong Zhang 
2130a30f8f8cSSatish Balay   } else {
2131a30f8f8cSSatish Balay     /* receive numeric values */
2132a30f8f8cSSatish Balay     buf = (Scalar*)PetscMalloc(nz*sizeof(Scalar));CHKPTRQ(buf);
2133a30f8f8cSSatish Balay 
2134a30f8f8cSSatish Balay     /* receive message of values*/
2135a30f8f8cSSatish Balay     vals   = buf;
2136a30f8f8cSSatish Balay     mycols = ibuf;
2137a30f8f8cSSatish Balay     ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
2138a30f8f8cSSatish Balay     ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
2139*29bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2140a30f8f8cSSatish Balay 
2141a30f8f8cSSatish Balay     /* insert into matrix */
2142a30f8f8cSSatish Balay     jj      = rstart*bs;
2143a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2144a30f8f8cSSatish Balay       ierr    = MatSetValues_MPISBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2145a30f8f8cSSatish Balay       mycols += locrowlens[i];
2146a30f8f8cSSatish Balay       vals   += locrowlens[i];
2147a30f8f8cSSatish Balay       jj++;
2148a30f8f8cSSatish Balay     }
2149a30f8f8cSSatish Balay   }
21507e06b45fSHong Zhang 
2151a30f8f8cSSatish Balay   ierr = PetscFree(locrowlens);CHKERRQ(ierr);
2152a30f8f8cSSatish Balay   ierr = PetscFree(buf);CHKERRQ(ierr);
2153a30f8f8cSSatish Balay   ierr = PetscFree(ibuf);CHKERRQ(ierr);
2154a30f8f8cSSatish Balay   ierr = PetscFree(rowners);CHKERRQ(ierr);
2155a30f8f8cSSatish Balay   ierr = PetscFree(dlens);CHKERRQ(ierr);
2156a30f8f8cSSatish Balay   ierr = PetscFree(mask);CHKERRQ(ierr);
2157a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2158a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2159a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2160a30f8f8cSSatish Balay }
2161a30f8f8cSSatish Balay 
2162a30f8f8cSSatish Balay #undef __FUNC__
2163a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMPISBAIJSetHashTableFactor"
2164a30f8f8cSSatish Balay /*@
2165a30f8f8cSSatish Balay    MatMPISBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.
2166a30f8f8cSSatish Balay 
2167a30f8f8cSSatish Balay    Input Parameters:
2168a30f8f8cSSatish Balay .  mat  - the matrix
2169a30f8f8cSSatish Balay .  fact - factor
2170a30f8f8cSSatish Balay 
2171a30f8f8cSSatish Balay    Collective on Mat
2172a30f8f8cSSatish Balay 
2173a30f8f8cSSatish Balay    Level: advanced
2174a30f8f8cSSatish Balay 
2175a30f8f8cSSatish Balay   Notes:
2176a30f8f8cSSatish Balay    This can also be set by the command line option: -mat_use_hash_table fact
2177a30f8f8cSSatish Balay 
2178a30f8f8cSSatish Balay .keywords: matrix, hashtable, factor, HT
2179a30f8f8cSSatish Balay 
2180a30f8f8cSSatish Balay .seealso: MatSetOption()
2181a30f8f8cSSatish Balay @*/
2182a30f8f8cSSatish Balay int MatMPISBAIJSetHashTableFactor(Mat mat,PetscReal fact)
2183a30f8f8cSSatish Balay {
2184a30f8f8cSSatish Balay   PetscFunctionBegin;
2185*29bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
218696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
2187a30f8f8cSSatish Balay }
2188