xref: /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c (revision 9b9367d5852f754a5e6b38cf827942f848b9b202)
173f4d377SMatthew Knepley /*$Id: mpisbaij.c,v 1.61 2001/08/10 03:31:37 bsmith Exp $*/
2a30f8f8cSSatish Balay 
3c8117e22SSatish Balay #include "src/mat/impls/baij/mpi/mpibaij.h"    /*I "petscmat.h" I*/
4a30f8f8cSSatish Balay #include "src/vec/vecimpl.h"
5a30f8f8cSSatish Balay #include "mpisbaij.h"
6a30f8f8cSSatish Balay #include "src/mat/impls/sbaij/seq/sbaij.h"
7a30f8f8cSSatish Balay 
8a30f8f8cSSatish Balay extern int MatSetUpMultiply_MPISBAIJ(Mat);
9a30f8f8cSSatish Balay extern int DisAssemble_MPISBAIJ(Mat);
10a30f8f8cSSatish Balay extern int MatIncreaseOverlap_MPISBAIJ(Mat,int,IS *,int);
11a30f8f8cSSatish Balay extern int MatGetSubMatrices_MPISBAIJ(Mat,int,IS *,IS *,MatReuse,Mat **);
1287828ca2SBarry Smith extern int MatGetValues_SeqSBAIJ(Mat,int,int *,int,int *,PetscScalar *);
1387828ca2SBarry Smith extern int MatSetValues_SeqSBAIJ(Mat,int,int *,int,int *,PetscScalar *,InsertMode);
1487828ca2SBarry Smith extern int MatSetValuesBlocked_SeqSBAIJ(Mat,int,int*,int,int*,PetscScalar*,InsertMode);
1587828ca2SBarry Smith extern int MatGetRow_SeqSBAIJ(Mat,int,int*,int**,PetscScalar**);
1687828ca2SBarry Smith extern int MatRestoreRow_SeqSBAIJ(Mat,int,int*,int**,PetscScalar**);
17a30f8f8cSSatish Balay extern int MatPrintHelp_SeqSBAIJ(Mat);
1887828ca2SBarry Smith extern int MatZeroRows_SeqSBAIJ(Mat,IS,PetscScalar*);
1987828ca2SBarry Smith extern int MatZeroRows_SeqBAIJ(Mat,IS,PetscScalar *);
20d0566740SHong Zhang extern int MatGetRowMax_MPISBAIJ(Mat,Vec);
21c14dc6b6SHong Zhang extern int MatRelax_MPISBAIJ(Mat,Vec,PetscReal,MatSORType,PetscReal,int,int,Vec);
22a30f8f8cSSatish Balay 
23a30f8f8cSSatish Balay /*  UGLY, ugly, ugly
2487828ca2SBarry Smith    When MatScalar == PetscScalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
25a30f8f8cSSatish Balay    not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
26a30f8f8cSSatish Balay    inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
27a30f8f8cSSatish Balay    converts the entries into single precision and then calls ..._MatScalar() to put them
28a30f8f8cSSatish Balay    into the single precision data structures.
29a30f8f8cSSatish Balay */
30a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
31a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
32a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
33a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
34a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
35a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
36a30f8f8cSSatish Balay #else
37a30f8f8cSSatish Balay #define MatSetValuesBlocked_SeqSBAIJ_MatScalar      MatSetValuesBlocked_SeqSBAIJ
38a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_MatScalar             MatSetValues_MPISBAIJ
39a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_MatScalar      MatSetValuesBlocked_MPISBAIJ
40a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_HT_MatScalar          MatSetValues_MPISBAIJ_HT
41a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_HT_MatScalar   MatSetValuesBlocked_MPISBAIJ_HT
42a30f8f8cSSatish Balay #endif
43a30f8f8cSSatish Balay 
44a30f8f8cSSatish Balay EXTERN_C_BEGIN
454a2ae208SSatish Balay #undef __FUNCT__
464a2ae208SSatish Balay #define __FUNCT__ "MatStoreValues_MPISBAIJ"
47a30f8f8cSSatish Balay int MatStoreValues_MPISBAIJ(Mat mat)
48a30f8f8cSSatish Balay {
49f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
50a30f8f8cSSatish Balay   int          ierr;
51a30f8f8cSSatish Balay 
52a30f8f8cSSatish Balay   PetscFunctionBegin;
53a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
54a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
55a30f8f8cSSatish Balay   PetscFunctionReturn(0);
56a30f8f8cSSatish Balay }
57a30f8f8cSSatish Balay EXTERN_C_END
58a30f8f8cSSatish Balay 
59a30f8f8cSSatish Balay EXTERN_C_BEGIN
604a2ae208SSatish Balay #undef __FUNCT__
614a2ae208SSatish Balay #define __FUNCT__ "MatRetrieveValues_MPISBAIJ"
62a30f8f8cSSatish Balay int MatRetrieveValues_MPISBAIJ(Mat mat)
63a30f8f8cSSatish Balay {
64f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
65a30f8f8cSSatish Balay   int          ierr;
66a30f8f8cSSatish Balay 
67a30f8f8cSSatish Balay   PetscFunctionBegin;
68a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
69a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
70a30f8f8cSSatish Balay   PetscFunctionReturn(0);
71a30f8f8cSSatish Balay }
72a30f8f8cSSatish Balay EXTERN_C_END
73a30f8f8cSSatish Balay 
74a30f8f8cSSatish Balay /*
75a30f8f8cSSatish Balay      Local utility routine that creates a mapping from the global column
76a30f8f8cSSatish Balay    number to the local number in the off-diagonal part of the local
77a30f8f8cSSatish Balay    storage of the matrix.  This is done in a non scable way since the
78a30f8f8cSSatish Balay    length of colmap equals the global matrix length.
79a30f8f8cSSatish Balay */
804a2ae208SSatish Balay #undef __FUNCT__
814a2ae208SSatish Balay #define __FUNCT__ "CreateColmap_MPISBAIJ_Private"
82a30f8f8cSSatish Balay static int CreateColmap_MPISBAIJ_Private(Mat mat)
83a30f8f8cSSatish Balay {
84a30f8f8cSSatish Balay   PetscFunctionBegin;
8529bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
8696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
87a30f8f8cSSatish Balay }
88a30f8f8cSSatish Balay 
89a30f8f8cSSatish Balay #define CHUNKSIZE  10
90a30f8f8cSSatish Balay 
91a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv) \
92a30f8f8cSSatish Balay { \
93a30f8f8cSSatish Balay  \
94a30f8f8cSSatish Balay     brow = row/bs;  \
95a30f8f8cSSatish Balay     rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
96a30f8f8cSSatish Balay     rmax = aimax[brow]; nrow = ailen[brow]; \
97a30f8f8cSSatish Balay       bcol = col/bs; \
98a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
99a30f8f8cSSatish Balay       low = 0; high = nrow; \
100a30f8f8cSSatish Balay       while (high-low > 3) { \
101a30f8f8cSSatish Balay         t = (low+high)/2; \
102a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
103a30f8f8cSSatish Balay         else              low  = t; \
104a30f8f8cSSatish Balay       } \
105a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
106a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
107a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
108a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
109a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
110a30f8f8cSSatish Balay           else                    *bap  = value;  \
111a30f8f8cSSatish Balay           goto a_noinsert; \
112a30f8f8cSSatish Balay         } \
113a30f8f8cSSatish Balay       } \
114a30f8f8cSSatish Balay       if (a->nonew == 1) goto a_noinsert; \
11529bbc08cSBarry Smith       else if (a->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
116a30f8f8cSSatish Balay       if (nrow >= rmax) { \
117a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
118a30f8f8cSSatish Balay         int       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
119a30f8f8cSSatish Balay         MatScalar *new_a; \
120a30f8f8cSSatish Balay  \
12129bbc08cSBarry Smith         if (a->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
122a30f8f8cSSatish Balay  \
123a30f8f8cSSatish Balay         /* malloc new storage space */ \
124a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(int); \
12582502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
126a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
127a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
128a30f8f8cSSatish Balay  \
129a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
130a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
131a30f8f8cSSatish Balay         for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
132a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
133a30f8f8cSSatish Balay         len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
134a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
135a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
13687828ca2SBarry Smith         ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(PetscScalar));CHKERRQ(ierr); \
137a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
138a30f8f8cSSatish Balay                     aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
139a30f8f8cSSatish Balay         /* free up old matrix storage */ \
140a30f8f8cSSatish Balay         ierr = PetscFree(a->a);CHKERRQ(ierr);  \
141a30f8f8cSSatish Balay         if (!a->singlemalloc) { \
142a30f8f8cSSatish Balay           ierr = PetscFree(a->i);CHKERRQ(ierr); \
143a30f8f8cSSatish Balay           ierr = PetscFree(a->j);CHKERRQ(ierr);\
144a30f8f8cSSatish Balay         } \
145a30f8f8cSSatish Balay         aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
146a30f8f8cSSatish Balay         a->singlemalloc = PETSC_TRUE; \
147a30f8f8cSSatish Balay  \
148a30f8f8cSSatish Balay         rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
149a30f8f8cSSatish Balay         rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
150b0a32e0cSBarry Smith         PetscLogObjectMemory(A,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
151a30f8f8cSSatish Balay         a->s_maxnz += bs2*CHUNKSIZE; \
152a30f8f8cSSatish Balay         a->reallocs++; \
153a30f8f8cSSatish Balay         a->s_nz++; \
154a30f8f8cSSatish Balay       } \
155a30f8f8cSSatish Balay       N = nrow++ - 1;  \
156a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
157a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
158a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
159a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
160a30f8f8cSSatish Balay       } \
161a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
162a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
163a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
164a30f8f8cSSatish Balay       a_noinsert:; \
165a30f8f8cSSatish Balay     ailen[brow] = nrow; \
166a30f8f8cSSatish Balay }
167a30f8f8cSSatish Balay #ifndef MatSetValues_SeqBAIJ_B_Private
168a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv) \
169a30f8f8cSSatish Balay { \
170a30f8f8cSSatish Balay     brow = row/bs;  \
171a30f8f8cSSatish Balay     rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
172a30f8f8cSSatish Balay     rmax = bimax[brow]; nrow = bilen[brow]; \
173a30f8f8cSSatish Balay       bcol = col/bs; \
174a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
175a30f8f8cSSatish Balay       low = 0; high = nrow; \
176a30f8f8cSSatish Balay       while (high-low > 3) { \
177a30f8f8cSSatish Balay         t = (low+high)/2; \
178a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
179a30f8f8cSSatish Balay         else              low  = t; \
180a30f8f8cSSatish Balay       } \
181a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
182a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
183a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
184a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
185a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
186a30f8f8cSSatish Balay           else                    *bap  = value;  \
187a30f8f8cSSatish Balay           goto b_noinsert; \
188a30f8f8cSSatish Balay         } \
189a30f8f8cSSatish Balay       } \
190a30f8f8cSSatish Balay       if (b->nonew == 1) goto b_noinsert; \
19129bbc08cSBarry Smith       else if (b->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
192a30f8f8cSSatish Balay       if (nrow >= rmax) { \
193a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
194a30f8f8cSSatish Balay         int       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
195a30f8f8cSSatish Balay         MatScalar *new_a; \
196a30f8f8cSSatish Balay  \
19729bbc08cSBarry Smith         if (b->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
198a30f8f8cSSatish Balay  \
199a30f8f8cSSatish Balay         /* malloc new storage space */ \
200a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(int); \
20182502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
202a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
203a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
204a30f8f8cSSatish Balay  \
205a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
206a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
207a30f8f8cSSatish Balay         for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
208a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
209a30f8f8cSSatish Balay         len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
210a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
211a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
212a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
213a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
214a30f8f8cSSatish Balay                     ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
215a30f8f8cSSatish Balay         /* free up old matrix storage */ \
216a30f8f8cSSatish Balay         ierr = PetscFree(b->a);CHKERRQ(ierr);  \
217a30f8f8cSSatish Balay         if (!b->singlemalloc) { \
218a30f8f8cSSatish Balay           ierr = PetscFree(b->i);CHKERRQ(ierr); \
219a30f8f8cSSatish Balay           ierr = PetscFree(b->j);CHKERRQ(ierr); \
220a30f8f8cSSatish Balay         } \
221a30f8f8cSSatish Balay         ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
222a30f8f8cSSatish Balay         b->singlemalloc = PETSC_TRUE; \
223a30f8f8cSSatish Balay  \
224a30f8f8cSSatish Balay         rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
225a30f8f8cSSatish Balay         rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
226b0a32e0cSBarry Smith         PetscLogObjectMemory(B,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
227a30f8f8cSSatish Balay         b->maxnz += bs2*CHUNKSIZE; \
228a30f8f8cSSatish Balay         b->reallocs++; \
229a30f8f8cSSatish Balay         b->nz++; \
230a30f8f8cSSatish Balay       } \
231a30f8f8cSSatish Balay       N = nrow++ - 1;  \
232a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
233a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
234a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
235a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
236a30f8f8cSSatish Balay       } \
237a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
238a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
239a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
240a30f8f8cSSatish Balay       b_noinsert:; \
241a30f8f8cSSatish Balay     bilen[brow] = nrow; \
242a30f8f8cSSatish Balay }
243a30f8f8cSSatish Balay #endif
244a30f8f8cSSatish Balay 
245a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
2464a2ae208SSatish Balay #undef __FUNCT__
2474a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ"
24887828ca2SBarry Smith int MatSetValues_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,PetscScalar *v,InsertMode addv)
249a30f8f8cSSatish Balay {
250a30f8f8cSSatish Balay   Mat_MPISBAIJ *b = (Mat_MPISBAIJ*)mat->data;
251a30f8f8cSSatish Balay   int          ierr,i,N = m*n;
252a30f8f8cSSatish Balay   MatScalar    *vsingle;
253a30f8f8cSSatish Balay 
254a30f8f8cSSatish Balay   PetscFunctionBegin;
255a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
256a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
25782502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
258a30f8f8cSSatish Balay     b->setvalueslen  = N;
259a30f8f8cSSatish Balay   }
260a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
261a30f8f8cSSatish Balay 
262a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
263a30f8f8cSSatish Balay     vsingle[i] = v[i];
264a30f8f8cSSatish Balay   }
265a30f8f8cSSatish Balay   ierr = MatSetValues_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
266a30f8f8cSSatish Balay   PetscFunctionReturn(0);
267a30f8f8cSSatish Balay }
268a30f8f8cSSatish Balay 
2694a2ae208SSatish Balay #undef __FUNCT__
2704a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ"
27187828ca2SBarry Smith int MatSetValuesBlocked_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,PetscScalar *v,InsertMode addv)
272a30f8f8cSSatish Balay {
273a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
274a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
275a30f8f8cSSatish Balay   MatScalar   *vsingle;
276a30f8f8cSSatish Balay 
277a30f8f8cSSatish Balay   PetscFunctionBegin;
278a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
279a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
28082502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
281a30f8f8cSSatish Balay     b->setvalueslen  = N;
282a30f8f8cSSatish Balay   }
283a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
284a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
285a30f8f8cSSatish Balay     vsingle[i] = v[i];
286a30f8f8cSSatish Balay   }
287a30f8f8cSSatish Balay   ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
288a30f8f8cSSatish Balay   PetscFunctionReturn(0);
289a30f8f8cSSatish Balay }
290a30f8f8cSSatish Balay 
2914a2ae208SSatish Balay #undef __FUNCT__
2924a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ_HT"
29387828ca2SBarry Smith int MatSetValues_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,PetscScalar *v,InsertMode addv)
294a30f8f8cSSatish Balay {
295a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
296a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
297a30f8f8cSSatish Balay   MatScalar   *vsingle;
298a30f8f8cSSatish Balay 
299a30f8f8cSSatish Balay   PetscFunctionBegin;
30029bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3014d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
302a30f8f8cSSatish Balay }
303a30f8f8cSSatish Balay 
3044a2ae208SSatish Balay #undef __FUNCT__
3054a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ_HT"
30687828ca2SBarry Smith int MatSetValuesBlocked_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,PetscScalar *v,InsertMode addv)
307a30f8f8cSSatish Balay {
308a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
309a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
310a30f8f8cSSatish Balay   MatScalar   *vsingle;
311a30f8f8cSSatish Balay 
312a30f8f8cSSatish Balay   PetscFunctionBegin;
31329bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3144d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
315a30f8f8cSSatish Balay }
316a30f8f8cSSatish Balay #endif
317a30f8f8cSSatish Balay 
318a30f8f8cSSatish Balay /* Only add/insert a(i,j) with i<=j (blocks).
319a30f8f8cSSatish Balay    Any a(i,j) with i>j input by user is ingored.
320a30f8f8cSSatish Balay */
3214a2ae208SSatish Balay #undef __FUNCT__
3224a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPIBAIJ"
323a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
324a30f8f8cSSatish Balay {
325a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
326a30f8f8cSSatish Balay   MatScalar    value;
327b5df2d14SHong Zhang   PetscTruth   roworiented = baij->roworiented;
328a30f8f8cSSatish Balay   int          ierr,i,j,row,col;
329b5df2d14SHong Zhang   int          rstart_orig=baij->rstart_bs;
330a30f8f8cSSatish Balay   int          rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
331a30f8f8cSSatish Balay   int          cend_orig=baij->cend_bs,bs=baij->bs;
332a30f8f8cSSatish Balay 
333a30f8f8cSSatish Balay   /* Some Variables required in the macro */
334a30f8f8cSSatish Balay   Mat          A = baij->A;
335a30f8f8cSSatish Balay   Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)(A)->data;
336a30f8f8cSSatish Balay   int          *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
337a30f8f8cSSatish Balay   MatScalar    *aa=a->a;
338a30f8f8cSSatish Balay 
339a30f8f8cSSatish Balay   Mat          B = baij->B;
340a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(B)->data;
341a30f8f8cSSatish Balay   int          *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
342a30f8f8cSSatish Balay   MatScalar    *ba=b->a;
343a30f8f8cSSatish Balay 
344a30f8f8cSSatish Balay   int          *rp,ii,nrow,_i,rmax,N,brow,bcol;
345a30f8f8cSSatish Balay   int          low,high,t,ridx,cidx,bs2=a->bs2;
346a30f8f8cSSatish Balay   MatScalar    *ap,*bap;
347a30f8f8cSSatish Balay 
348a30f8f8cSSatish Balay   /* for stash */
349f65c83cfSHong Zhang   int          n_loc, *in_loc=0;
350f65c83cfSHong Zhang   MatScalar    *v_loc=0;
351a30f8f8cSSatish Balay 
352a30f8f8cSSatish Balay   PetscFunctionBegin;
353a30f8f8cSSatish Balay 
354a30f8f8cSSatish Balay   if(!baij->donotstash){
35582502324SSatish Balay     ierr = PetscMalloc(n*sizeof(int),&in_loc);CHKERRQ(ierr);
35682502324SSatish Balay     ierr = PetscMalloc(n*sizeof(MatScalar),&v_loc);CHKERRQ(ierr);
357a30f8f8cSSatish Balay   }
358a30f8f8cSSatish Balay 
359a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
360a30f8f8cSSatish Balay     if (im[i] < 0) continue;
361a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
362b5df2d14SHong Zhang     if (im[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
363a30f8f8cSSatish Balay #endif
364a30f8f8cSSatish Balay     if (im[i] >= rstart_orig && im[i] < rend_orig) { /* this processor entry */
365a30f8f8cSSatish Balay       row = im[i] - rstart_orig;              /* local row index */
366a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
367f65c83cfSHong Zhang         if (im[i]/bs > in[j]/bs) continue;    /* ignore lower triangular blocks */
368a30f8f8cSSatish Balay         if (in[j] >= cstart_orig && in[j] < cend_orig){  /* diag entry (A) */
369a30f8f8cSSatish Balay           col = in[j] - cstart_orig;          /* local col index */
370a30f8f8cSSatish Balay           brow = row/bs; bcol = col/bs;
371a30f8f8cSSatish Balay           if (brow > bcol) continue;  /* ignore lower triangular blocks of A */
372a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
373a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv);
374a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
375a30f8f8cSSatish Balay         } else if (in[j] < 0) continue;
376a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
377b5df2d14SHong Zhang         else if (in[j] >= mat->N) {SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Col too large");}
378a30f8f8cSSatish Balay #endif
379a30f8f8cSSatish Balay         else {  /* off-diag entry (B) */
380a30f8f8cSSatish Balay           if (mat->was_assembled) {
381a30f8f8cSSatish Balay             if (!baij->colmap) {
382a30f8f8cSSatish Balay               ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
383a30f8f8cSSatish Balay             }
384a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
385a30f8f8cSSatish Balay             ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
386a30f8f8cSSatish Balay             col  = col - 1 + in[j]%bs;
387a30f8f8cSSatish Balay #else
388a30f8f8cSSatish Balay             col = baij->colmap[in[j]/bs] - 1 + in[j]%bs;
389a30f8f8cSSatish Balay #endif
390a30f8f8cSSatish Balay             if (col < 0 && !((Mat_SeqSBAIJ*)(baij->A->data))->nonew) {
391a30f8f8cSSatish Balay               ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
392a30f8f8cSSatish Balay               col =  in[j];
393a30f8f8cSSatish Balay               /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
394a30f8f8cSSatish Balay               B = baij->B;
395a30f8f8cSSatish Balay               b = (Mat_SeqBAIJ*)(B)->data;
396a30f8f8cSSatish Balay               bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
397a30f8f8cSSatish Balay               ba=b->a;
398a30f8f8cSSatish Balay             }
399a30f8f8cSSatish Balay           } else col = in[j];
400a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
401a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv);
402a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
403a30f8f8cSSatish Balay         }
404a30f8f8cSSatish Balay       }
405a30f8f8cSSatish Balay     } else {  /* off processor entry */
406a30f8f8cSSatish Balay       if (!baij->donotstash) {
407a30f8f8cSSatish Balay         n_loc = 0;
408a30f8f8cSSatish Balay         for (j=0; j<n; j++){
409f65c83cfSHong Zhang           if (im[i]/bs > in[j]/bs) continue; /* ignore lower triangular blocks */
410a30f8f8cSSatish Balay           in_loc[n_loc] = in[j];
411a30f8f8cSSatish Balay           if (roworiented) {
412a30f8f8cSSatish Balay             v_loc[n_loc] = v[i*n+j];
413a30f8f8cSSatish Balay           } else {
414a30f8f8cSSatish Balay             v_loc[n_loc] = v[j*m+i];
415a30f8f8cSSatish Balay           }
416a30f8f8cSSatish Balay           n_loc++;
417a30f8f8cSSatish Balay         }
418a30f8f8cSSatish Balay         ierr = MatStashValuesRow_Private(&mat->stash,im[i],n_loc,in_loc,v_loc);CHKERRQ(ierr);
419a30f8f8cSSatish Balay       }
420a30f8f8cSSatish Balay     }
421a30f8f8cSSatish Balay   }
422a30f8f8cSSatish Balay 
423a30f8f8cSSatish Balay   if(!baij->donotstash){
424a30f8f8cSSatish Balay     ierr = PetscFree(in_loc);CHKERRQ(ierr);
425a30f8f8cSSatish Balay     ierr = PetscFree(v_loc);CHKERRQ(ierr);
426a30f8f8cSSatish Balay   }
427a30f8f8cSSatish Balay   PetscFunctionReturn(0);
428a30f8f8cSSatish Balay }
429a30f8f8cSSatish Balay 
4304a2ae208SSatish Balay #undef __FUNCT__
4314a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ"
432a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
433a30f8f8cSSatish Balay {
434a30f8f8cSSatish Balay   PetscFunctionBegin;
43529bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
43696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
437a30f8f8cSSatish Balay }
438a30f8f8cSSatish Balay 
439a30f8f8cSSatish Balay #define HASH_KEY 0.6180339887
440a30f8f8cSSatish Balay #define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(int)((size)*(tmp-(int)tmp)))
441a30f8f8cSSatish Balay /* #define HASH(size,key) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
442a30f8f8cSSatish Balay /* #define HASH(size,key,tmp) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
4434a2ae208SSatish Balay #undef __FUNCT__
4444a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ_HT_MatScalar"
445a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
446a30f8f8cSSatish Balay {
447a30f8f8cSSatish Balay   PetscFunctionBegin;
44829bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
44996e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
450a30f8f8cSSatish Balay }
451a30f8f8cSSatish Balay 
4524a2ae208SSatish Balay #undef __FUNCT__
4534a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ_HT_MatScalar"
454a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
455a30f8f8cSSatish Balay {
456a30f8f8cSSatish Balay   PetscFunctionBegin;
45729bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
45896e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
459a30f8f8cSSatish Balay }
460a30f8f8cSSatish Balay 
4614a2ae208SSatish Balay #undef __FUNCT__
4624a2ae208SSatish Balay #define __FUNCT__ "MatGetValues_MPISBAIJ"
46387828ca2SBarry Smith int MatGetValues_MPISBAIJ(Mat mat,int m,int *idxm,int n,int *idxn,PetscScalar *v)
464a30f8f8cSSatish Balay {
465f3566a2aSHong Zhang   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
466a30f8f8cSSatish Balay   int          bs=baij->bs,ierr,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
467a30f8f8cSSatish Balay   int          bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;
468a30f8f8cSSatish Balay 
469a30f8f8cSSatish Balay   PetscFunctionBegin;
470a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
47129bbc08cSBarry Smith     if (idxm[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
472b5df2d14SHong Zhang     if (idxm[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
473a30f8f8cSSatish Balay     if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
474a30f8f8cSSatish Balay       row = idxm[i] - bsrstart;
475a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
47629bbc08cSBarry Smith         if (idxn[j] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative column");
477b5df2d14SHong Zhang         if (idxn[j] >= mat->N) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
478a30f8f8cSSatish Balay         if (idxn[j] >= bscstart && idxn[j] < bscend){
479a30f8f8cSSatish Balay           col = idxn[j] - bscstart;
480c8407628SSatish Balay           ierr = MatGetValues_SeqSBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
481a30f8f8cSSatish Balay         } else {
482a30f8f8cSSatish Balay           if (!baij->colmap) {
483a30f8f8cSSatish Balay             ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
484a30f8f8cSSatish Balay           }
485a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
486a30f8f8cSSatish Balay           ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
487a30f8f8cSSatish Balay           data --;
488a30f8f8cSSatish Balay #else
489a30f8f8cSSatish Balay           data = baij->colmap[idxn[j]/bs]-1;
490a30f8f8cSSatish Balay #endif
491a30f8f8cSSatish Balay           if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
492a30f8f8cSSatish Balay           else {
493a30f8f8cSSatish Balay             col  = data + idxn[j]%bs;
494c8407628SSatish Balay             ierr = MatGetValues_SeqSBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
495a30f8f8cSSatish Balay           }
496a30f8f8cSSatish Balay         }
497a30f8f8cSSatish Balay       }
498a30f8f8cSSatish Balay     } else {
49929bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
500a30f8f8cSSatish Balay     }
501a30f8f8cSSatish Balay   }
502a30f8f8cSSatish Balay  PetscFunctionReturn(0);
503a30f8f8cSSatish Balay }
504a30f8f8cSSatish Balay 
5054a2ae208SSatish Balay #undef __FUNCT__
5064a2ae208SSatish Balay #define __FUNCT__ "MatNorm_MPISBAIJ"
507a30f8f8cSSatish Balay int MatNorm_MPISBAIJ(Mat mat,NormType type,PetscReal *norm)
508a30f8f8cSSatish Balay {
509a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
510bc0ba53dSHong Zhang   /* Mat_SeqSBAIJ *amat = (Mat_SeqSBAIJ*)baij->A->data; */
511bc0ba53dSHong Zhang   /* Mat_SeqBAIJ  *bmat = (Mat_SeqBAIJ*)baij->B->data; */
512a30f8f8cSSatish Balay   int        ierr;
513a30f8f8cSSatish Balay   PetscReal  sum[2],*lnorm2;
514a30f8f8cSSatish Balay 
515a30f8f8cSSatish Balay   PetscFunctionBegin;
516a30f8f8cSSatish Balay   if (baij->size == 1) {
517a30f8f8cSSatish Balay     ierr =  MatNorm(baij->A,type,norm);CHKERRQ(ierr);
518a30f8f8cSSatish Balay   } else {
519a30f8f8cSSatish Balay     if (type == NORM_FROBENIUS) {
520f6275e2eSBarry Smith       ierr = PetscMalloc(2*sizeof(PetscReal),&lnorm2);CHKERRQ(ierr);
521a30f8f8cSSatish Balay       ierr =  MatNorm(baij->A,type,lnorm2);CHKERRQ(ierr);
522a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2++;            /* squar power of norm(A) */
523a30f8f8cSSatish Balay       ierr =  MatNorm(baij->B,type,lnorm2);CHKERRQ(ierr);
524a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2--;             /* squar power of norm(B) */
525a30f8f8cSSatish Balay       /*
526a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
527a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], lnorm2=%g, %g\n",rank,lnorm2[0],lnorm2[1]);
528a30f8f8cSSatish Balay       */
529d7d1e502SBarry Smith       ierr = MPI_Allreduce(lnorm2,&sum,2,MPIU_REAL,MPI_SUM,mat->comm);CHKERRQ(ierr);
530a30f8f8cSSatish Balay       /*
531a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], sum=%g, %g\n",rank,sum[0],sum[1]);
532a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD); */
533a30f8f8cSSatish Balay 
534a30f8f8cSSatish Balay       *norm = sqrt(sum[0] + 2*sum[1]);
535a30f8f8cSSatish Balay       ierr = PetscFree(lnorm2);CHKERRQ(ierr);
536a30f8f8cSSatish Balay     } else {
53729bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
538a30f8f8cSSatish Balay     }
539a30f8f8cSSatish Balay   }
540a30f8f8cSSatish Balay   PetscFunctionReturn(0);
541a30f8f8cSSatish Balay }
542a30f8f8cSSatish Balay 
543a30f8f8cSSatish Balay /*
544a30f8f8cSSatish Balay   Creates the hash table, and sets the table
545a30f8f8cSSatish Balay   This table is created only once.
546a30f8f8cSSatish Balay   If new entried need to be added to the matrix
547a30f8f8cSSatish Balay   then the hash table has to be destroyed and
548a30f8f8cSSatish Balay   recreated.
549a30f8f8cSSatish Balay */
5504a2ae208SSatish Balay #undef __FUNCT__
5514a2ae208SSatish Balay #define __FUNCT__ "MatCreateHashTable_MPISBAIJ_Private"
552a30f8f8cSSatish Balay int MatCreateHashTable_MPISBAIJ_Private(Mat mat,PetscReal factor)
553a30f8f8cSSatish Balay {
554a30f8f8cSSatish Balay   PetscFunctionBegin;
55529bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
55696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
557a30f8f8cSSatish Balay }
558a30f8f8cSSatish Balay 
5594a2ae208SSatish Balay #undef __FUNCT__
5604a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyBegin_MPISBAIJ"
561a30f8f8cSSatish Balay int MatAssemblyBegin_MPISBAIJ(Mat mat,MatAssemblyType mode)
562a30f8f8cSSatish Balay {
563a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
564a30f8f8cSSatish Balay   int         ierr,nstash,reallocs;
565a30f8f8cSSatish Balay   InsertMode  addv;
566a30f8f8cSSatish Balay 
567a30f8f8cSSatish Balay   PetscFunctionBegin;
568a30f8f8cSSatish Balay   if (baij->donotstash) {
569a30f8f8cSSatish Balay     PetscFunctionReturn(0);
570a30f8f8cSSatish Balay   }
571a30f8f8cSSatish Balay 
572a30f8f8cSSatish Balay   /* make sure all processors are either in INSERTMODE or ADDMODE */
573a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
574a30f8f8cSSatish Balay   if (addv == (ADD_VALUES|INSERT_VALUES)) {
57529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
576a30f8f8cSSatish Balay   }
577a30f8f8cSSatish Balay   mat->insertmode = addv; /* in case this processor had no cache */
578a30f8f8cSSatish Balay 
579a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
580a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
581a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
582b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Stash has %d entries,uses %d mallocs.\n",nstash,reallocs);
583a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
584b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Block-Stash has %d entries, uses %d mallocs.\n",nstash,reallocs);
585a30f8f8cSSatish Balay   PetscFunctionReturn(0);
586a30f8f8cSSatish Balay }
587a30f8f8cSSatish Balay 
5884a2ae208SSatish Balay #undef __FUNCT__
5894a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyEnd_MPISBAIJ"
590a30f8f8cSSatish Balay int MatAssemblyEnd_MPISBAIJ(Mat mat,MatAssemblyType mode)
591a30f8f8cSSatish Balay {
592a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij=(Mat_MPISBAIJ*)mat->data;
593a30f8f8cSSatish Balay   Mat_SeqSBAIJ  *a=(Mat_SeqSBAIJ*)baij->A->data;
594a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b=(Mat_SeqBAIJ*)baij->B->data;
595a30f8f8cSSatish Balay   int         i,j,rstart,ncols,n,ierr,flg,bs2=baij->bs2;
596a30f8f8cSSatish Balay   int         *row,*col,other_disassembled;
597a30f8f8cSSatish Balay   PetscTruth  r1,r2,r3;
598a30f8f8cSSatish Balay   MatScalar   *val;
599a30f8f8cSSatish Balay   InsertMode  addv = mat->insertmode;
6006f651dedSSatish Balay   /* int         rank;*/
601a30f8f8cSSatish Balay 
602a30f8f8cSSatish Balay   PetscFunctionBegin;
603a30f8f8cSSatish Balay   /* remove 2 line below later */
6046f651dedSSatish Balay   /*ierr = MPI_Comm_rank(PETSC_COMM_WORLD, &rank);CHKERRQ(ierr); */
605a30f8f8cSSatish Balay 
606a30f8f8cSSatish Balay   if (!baij->donotstash) {
607a30f8f8cSSatish Balay     while (1) {
608a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
609a30f8f8cSSatish Balay       /*
610a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d]: in AssemblyEnd, stash, flg=%d\n",rank,flg);
611a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD);
612a30f8f8cSSatish Balay       */
613a30f8f8cSSatish Balay       if (!flg) break;
614a30f8f8cSSatish Balay 
615a30f8f8cSSatish Balay       for (i=0; i<n;) {
616a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
617a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
618a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
619a30f8f8cSSatish Balay         else       ncols = n-i;
620a30f8f8cSSatish Balay         /* Now assemble all these values with a single function call */
621a30f8f8cSSatish Balay         ierr = MatSetValues_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
622a30f8f8cSSatish Balay         i = j;
623a30f8f8cSSatish Balay       }
624a30f8f8cSSatish Balay     }
625a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
626a30f8f8cSSatish Balay     /* Now process the block-stash. Since the values are stashed column-oriented,
627a30f8f8cSSatish Balay        set the roworiented flag to column oriented, and after MatSetValues()
628a30f8f8cSSatish Balay        restore the original flags */
629a30f8f8cSSatish Balay     r1 = baij->roworiented;
630a30f8f8cSSatish Balay     r2 = a->roworiented;
631a30f8f8cSSatish Balay     r3 = b->roworiented;
632a30f8f8cSSatish Balay     baij->roworiented = PETSC_FALSE;
633a30f8f8cSSatish Balay     a->roworiented    = PETSC_FALSE;
634a30f8f8cSSatish Balay     b->roworiented    = PETSC_FALSE;
635a30f8f8cSSatish Balay     while (1) {
636a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
637a30f8f8cSSatish Balay       if (!flg) break;
638a30f8f8cSSatish Balay 
639a30f8f8cSSatish Balay       for (i=0; i<n;) {
640a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
641a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
642a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
643a30f8f8cSSatish Balay         else       ncols = n-i;
644a30f8f8cSSatish Balay         ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
645a30f8f8cSSatish Balay         i = j;
646a30f8f8cSSatish Balay       }
647a30f8f8cSSatish Balay     }
648a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
649a30f8f8cSSatish Balay     baij->roworiented = r1;
650a30f8f8cSSatish Balay     a->roworiented    = r2;
651a30f8f8cSSatish Balay     b->roworiented    = r3;
652a30f8f8cSSatish Balay   }
653a30f8f8cSSatish Balay 
654a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
655a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);
656a30f8f8cSSatish Balay 
657a30f8f8cSSatish Balay   /* determine if any processor has disassembled, if so we must
658a30f8f8cSSatish Balay      also disassemble ourselfs, in order that we may reassemble. */
659a30f8f8cSSatish Balay   /*
660a30f8f8cSSatish Balay      if nonzero structure of submatrix B cannot change then we know that
661a30f8f8cSSatish Balay      no processor disassembled thus we can skip this stuff
662a30f8f8cSSatish Balay   */
663a30f8f8cSSatish Balay   if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
664a30f8f8cSSatish Balay     ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
665a30f8f8cSSatish Balay     if (mat->was_assembled && !other_disassembled) {
666c8407628SSatish Balay       ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
667a30f8f8cSSatish Balay     }
668a30f8f8cSSatish Balay   }
669a30f8f8cSSatish Balay 
670a30f8f8cSSatish Balay   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
671a30f8f8cSSatish Balay     ierr = MatSetUpMultiply_MPISBAIJ(mat);CHKERRQ(ierr);
672a30f8f8cSSatish Balay   }
673a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
674a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);
675a30f8f8cSSatish Balay 
676a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
677a30f8f8cSSatish Balay   if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
678f6275e2eSBarry Smith     PetscLogInfo(0,"MatAssemblyEnd_MPISBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((PetscReal)baij->ht_total_ct)/baij->ht_insert_ct);
679a30f8f8cSSatish Balay     baij->ht_total_ct  = 0;
680a30f8f8cSSatish Balay     baij->ht_insert_ct = 0;
681a30f8f8cSSatish Balay   }
682a30f8f8cSSatish Balay #endif
683a30f8f8cSSatish Balay   if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
684c8407628SSatish Balay     ierr = MatCreateHashTable_MPISBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
685a30f8f8cSSatish Balay     mat->ops->setvalues        = MatSetValues_MPISBAIJ_HT;
686a30f8f8cSSatish Balay     mat->ops->setvaluesblocked = MatSetValuesBlocked_MPISBAIJ_HT;
687a30f8f8cSSatish Balay   }
688a30f8f8cSSatish Balay 
689a30f8f8cSSatish Balay   if (baij->rowvalues) {
690a30f8f8cSSatish Balay     ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
691a30f8f8cSSatish Balay     baij->rowvalues = 0;
692a30f8f8cSSatish Balay   }
693a30f8f8cSSatish Balay   PetscFunctionReturn(0);
694a30f8f8cSSatish Balay }
695a30f8f8cSSatish Balay 
6964a2ae208SSatish Balay #undef __FUNCT__
6974a2ae208SSatish Balay #define __FUNCT__ "MatView_MPISBAIJ_ASCIIorDraworSocket"
698b0a32e0cSBarry Smith static int MatView_MPISBAIJ_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
699a30f8f8cSSatish Balay {
700a30f8f8cSSatish Balay   Mat_MPISBAIJ      *baij = (Mat_MPISBAIJ*)mat->data;
701fb9695e5SSatish Balay   int               ierr,bs = baij->bs,size = baij->size,rank = baij->rank;
702a30f8f8cSSatish Balay   PetscTruth        isascii,isdraw;
703b0a32e0cSBarry Smith   PetscViewer       sviewer;
704f3ef73ceSBarry Smith   PetscViewerFormat format;
705a30f8f8cSSatish Balay 
706a30f8f8cSSatish Balay   PetscFunctionBegin;
707b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
708fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
709a30f8f8cSSatish Balay   if (isascii) {
710b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
711fb9695e5SSatish Balay     if (format == PETSC_VIEWER_ASCII_INFO_LONG) {
712a30f8f8cSSatish Balay       MatInfo info;
713a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
714a30f8f8cSSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
715b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %d nz %d nz alloced %d bs %d mem %d\n",
716b5df2d14SHong Zhang               rank,mat->m,(int)info.nz_used*bs,(int)info.nz_allocated*bs,
717a30f8f8cSSatish Balay               baij->bs,(int)info.memory);CHKERRQ(ierr);
718a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
719b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
720a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
721b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
722b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
723a30f8f8cSSatish Balay       ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
724a30f8f8cSSatish Balay       PetscFunctionReturn(0);
725fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
726b0a32e0cSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  block size is %d\n",bs);CHKERRQ(ierr);
727a30f8f8cSSatish Balay       PetscFunctionReturn(0);
728a30f8f8cSSatish Balay     }
729a30f8f8cSSatish Balay   }
730a30f8f8cSSatish Balay 
731a30f8f8cSSatish Balay   if (isdraw) {
732b0a32e0cSBarry Smith     PetscDraw       draw;
733a30f8f8cSSatish Balay     PetscTruth isnull;
734b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
735b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
736a30f8f8cSSatish Balay   }
737a30f8f8cSSatish Balay 
738a30f8f8cSSatish Balay   if (size == 1) {
739e36acaf3SBarry Smith     ierr = PetscObjectSetName((PetscObject)baij->A,mat->name);CHKERRQ(ierr);
740a30f8f8cSSatish Balay     ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
741a30f8f8cSSatish Balay   } else {
742a30f8f8cSSatish Balay     /* assemble the entire matrix onto first processor. */
743a30f8f8cSSatish Balay     Mat         A;
74465d70643SHong Zhang     Mat_SeqSBAIJ *Aloc;
74565d70643SHong Zhang     Mat_SeqBAIJ *Bloc;
746b5df2d14SHong Zhang     int         M = mat->M,N = mat->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
747a30f8f8cSSatish Balay     MatScalar   *a;
748a30f8f8cSSatish Balay 
749a30f8f8cSSatish Balay     if (!rank) {
750bc0ba53dSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,M,N,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
751a30f8f8cSSatish Balay     } else {
752f65c83cfSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,0,0,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
753a30f8f8cSSatish Balay     }
754b0a32e0cSBarry Smith     PetscLogObjectParent(mat,A);
755a30f8f8cSSatish Balay 
756a30f8f8cSSatish Balay     /* copy over the A part */
75765d70643SHong Zhang     Aloc  = (Mat_SeqSBAIJ*)baij->A->data;
758a30f8f8cSSatish Balay     ai    = Aloc->i; aj = Aloc->j; a = Aloc->a;
75982502324SSatish Balay     ierr  = PetscMalloc(bs*sizeof(int),&rvals);CHKERRQ(ierr);
760a30f8f8cSSatish Balay 
761a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
762a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
763a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
764a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
765a30f8f8cSSatish Balay         col = (baij->cstart+aj[j])*bs;
766a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
767a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
768a30f8f8cSSatish Balay           col++; a += bs;
769a30f8f8cSSatish Balay         }
770a30f8f8cSSatish Balay       }
771a30f8f8cSSatish Balay     }
772a30f8f8cSSatish Balay     /* copy over the B part */
77365d70643SHong Zhang     Bloc = (Mat_SeqBAIJ*)baij->B->data;
77465d70643SHong Zhang     ai = Bloc->i; aj = Bloc->j; a = Bloc->a;
775a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
776a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
777a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
778a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
779a30f8f8cSSatish Balay         col = baij->garray[aj[j]]*bs;
780a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
781a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
782a30f8f8cSSatish Balay           col++; a += bs;
783a30f8f8cSSatish Balay         }
784a30f8f8cSSatish Balay       }
785a30f8f8cSSatish Balay     }
786a30f8f8cSSatish Balay     ierr = PetscFree(rvals);CHKERRQ(ierr);
787a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
788a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
789a30f8f8cSSatish Balay     /*
790a30f8f8cSSatish Balay        Everyone has to call to draw the matrix since the graphics waits are
791b0a32e0cSBarry Smith        synchronized across all processors that share the PetscDraw object
792a30f8f8cSSatish Balay     */
793b0a32e0cSBarry Smith     ierr = PetscViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
79465d70643SHong Zhang     if (!rank) {
795e36acaf3SBarry Smith       ierr = PetscObjectSetName((PetscObject)((Mat_MPISBAIJ*)(A->data))->A,mat->name);CHKERRQ(ierr);
796a30f8f8cSSatish Balay       ierr = MatView(((Mat_MPISBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
797a30f8f8cSSatish Balay     }
798b0a32e0cSBarry Smith     ierr = PetscViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
799a30f8f8cSSatish Balay     ierr = MatDestroy(A);CHKERRQ(ierr);
800a30f8f8cSSatish Balay   }
801a30f8f8cSSatish Balay   PetscFunctionReturn(0);
802a30f8f8cSSatish Balay }
803a30f8f8cSSatish Balay 
8044a2ae208SSatish Balay #undef __FUNCT__
8054a2ae208SSatish Balay #define __FUNCT__ "MatView_MPISBAIJ"
806b0a32e0cSBarry Smith int MatView_MPISBAIJ(Mat mat,PetscViewer viewer)
807a30f8f8cSSatish Balay {
808a30f8f8cSSatish Balay   int        ierr;
809a30f8f8cSSatish Balay   PetscTruth isascii,isdraw,issocket,isbinary;
810a30f8f8cSSatish Balay 
811a30f8f8cSSatish Balay   PetscFunctionBegin;
812b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
813fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
814b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_SOCKET,&issocket);CHKERRQ(ierr);
815fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_BINARY,&isbinary);CHKERRQ(ierr);
816a30f8f8cSSatish Balay   if (isascii || isdraw || issocket || isbinary) {
817a30f8f8cSSatish Balay     ierr = MatView_MPISBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
818a30f8f8cSSatish Balay   } else {
81929bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by MPISBAIJ matrices",((PetscObject)viewer)->type_name);
820a30f8f8cSSatish Balay   }
821a30f8f8cSSatish Balay   PetscFunctionReturn(0);
822a30f8f8cSSatish Balay }
823a30f8f8cSSatish Balay 
8244a2ae208SSatish Balay #undef __FUNCT__
8254a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_MPISBAIJ"
826a30f8f8cSSatish Balay int MatDestroy_MPISBAIJ(Mat mat)
827a30f8f8cSSatish Balay {
828a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
829a30f8f8cSSatish Balay   int         ierr;
830a30f8f8cSSatish Balay 
831a30f8f8cSSatish Balay   PetscFunctionBegin;
832a30f8f8cSSatish Balay #if defined(PETSC_USE_LOG)
833b0a32e0cSBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%d,Cols=%d",mat->M,mat->N);
834a30f8f8cSSatish Balay #endif
835a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
836a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
837a30f8f8cSSatish Balay   ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
838a30f8f8cSSatish Balay   ierr = MatDestroy(baij->A);CHKERRQ(ierr);
839a30f8f8cSSatish Balay   ierr = MatDestroy(baij->B);CHKERRQ(ierr);
840a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
841a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
842a30f8f8cSSatish Balay #else
843a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
844a30f8f8cSSatish Balay #endif
845a30f8f8cSSatish Balay   if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
846a30f8f8cSSatish Balay   if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
847a30f8f8cSSatish Balay   if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
848*9b9367d5SHong Zhang   if (baij->slvec0) {ierr = VecDestroy(baij->slvec0);CHKERRQ(ierr);}
849*9b9367d5SHong Zhang   if (baij->slvec1) {ierr = VecDestroy(baij->slvec1);CHKERRQ(ierr);}
850*9b9367d5SHong Zhang   if (baij->sMvctx)  {ierr = VecScatterDestroy(baij->sMvctx);CHKERRQ(ierr);}
851a30f8f8cSSatish Balay   if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
852a30f8f8cSSatish Balay   if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
853a30f8f8cSSatish Balay   if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
854a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
855a30f8f8cSSatish Balay   if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
856a30f8f8cSSatish Balay #endif
857a30f8f8cSSatish Balay   ierr = PetscFree(baij);CHKERRQ(ierr);
858a30f8f8cSSatish Balay   PetscFunctionReturn(0);
859a30f8f8cSSatish Balay }
860a30f8f8cSSatish Balay 
8614a2ae208SSatish Balay #undef __FUNCT__
8624a2ae208SSatish Balay #define __FUNCT__ "MatMult_MPISBAIJ"
863a30f8f8cSSatish Balay int MatMult_MPISBAIJ(Mat A,Vec xx,Vec yy)
864a30f8f8cSSatish Balay {
865a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
866a30f8f8cSSatish Balay   int         ierr,nt;
867a30f8f8cSSatish Balay 
868a30f8f8cSSatish Balay   PetscFunctionBegin;
869a30f8f8cSSatish Balay   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
870b5df2d14SHong Zhang   if (nt != A->n) {
87129bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
872a30f8f8cSSatish Balay   }
873a30f8f8cSSatish Balay   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
874b5df2d14SHong Zhang   if (nt != A->m) {
87529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
876a30f8f8cSSatish Balay   }
87765d70643SHong Zhang 
878b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
879b941877fSHong Zhang   /* do diagonal part */
880b941877fSHong Zhang   ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
881b941877fSHong Zhang   /* do supperdiagonal part */
882b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
883b941877fSHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
884b941877fSHong Zhang   /* do subdiagonal part */
885b941877fSHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
886b941877fSHong Zhang   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
887b941877fSHong Zhang   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
88865d70643SHong Zhang 
889a30f8f8cSSatish Balay   PetscFunctionReturn(0);
890a30f8f8cSSatish Balay }
891a30f8f8cSSatish Balay 
8924a2ae208SSatish Balay #undef __FUNCT__
8934a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_MPISBAIJ"
894a30f8f8cSSatish Balay int MatMultAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
895a30f8f8cSSatish Balay {
896de8b6608SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
897aa482183SHong Zhang   int        ierr;
898a30f8f8cSSatish Balay 
899a30f8f8cSSatish Balay   PetscFunctionBegin;
900b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
901b941877fSHong Zhang   /* do diagonal part */
902b941877fSHong Zhang   ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
903b941877fSHong Zhang   /* do supperdiagonal part */
904b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
905de8b6608SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
906de8b6608SHong Zhang 
907b941877fSHong Zhang   /* do subdiagonal part */
908a30f8f8cSSatish Balay   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
909a30f8f8cSSatish Balay   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
910a30f8f8cSSatish Balay   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
911aa482183SHong Zhang 
912a30f8f8cSSatish Balay   PetscFunctionReturn(0);
913a30f8f8cSSatish Balay }
914a30f8f8cSSatish Balay 
9154a2ae208SSatish Balay #undef __FUNCT__
9164a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_MPISBAIJ"
917a30f8f8cSSatish Balay int MatMultTranspose_MPISBAIJ(Mat A,Vec xx,Vec yy)
918a30f8f8cSSatish Balay {
919a30f8f8cSSatish Balay   PetscFunctionBegin;
92029bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMult().");
92196e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
922a30f8f8cSSatish Balay }
923a30f8f8cSSatish Balay 
9244a2ae208SSatish Balay #undef __FUNCT__
9254a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_MPISBAIJ"
926a30f8f8cSSatish Balay int MatMultTransposeAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
927a30f8f8cSSatish Balay {
928a30f8f8cSSatish Balay   PetscFunctionBegin;
92929bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMultAdd().");
93096e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
931a30f8f8cSSatish Balay }
932a30f8f8cSSatish Balay 
933a30f8f8cSSatish Balay /*
934a30f8f8cSSatish Balay   This only works correctly for square matrices where the subblock A->A is the
935a30f8f8cSSatish Balay    diagonal block
936a30f8f8cSSatish Balay */
9374a2ae208SSatish Balay #undef __FUNCT__
9384a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_MPISBAIJ"
939a30f8f8cSSatish Balay int MatGetDiagonal_MPISBAIJ(Mat A,Vec v)
940a30f8f8cSSatish Balay {
941a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
942a30f8f8cSSatish Balay   int         ierr;
943a30f8f8cSSatish Balay 
944a30f8f8cSSatish Balay   PetscFunctionBegin;
94529bbc08cSBarry Smith   /* if (a->M != a->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block"); */
946a30f8f8cSSatish Balay   ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
947a30f8f8cSSatish Balay   PetscFunctionReturn(0);
948a30f8f8cSSatish Balay }
949a30f8f8cSSatish Balay 
9504a2ae208SSatish Balay #undef __FUNCT__
9514a2ae208SSatish Balay #define __FUNCT__ "MatScale_MPISBAIJ"
95287828ca2SBarry Smith int MatScale_MPISBAIJ(PetscScalar *aa,Mat A)
953a30f8f8cSSatish Balay {
954a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
955a30f8f8cSSatish Balay   int         ierr;
956a30f8f8cSSatish Balay 
957a30f8f8cSSatish Balay   PetscFunctionBegin;
958a30f8f8cSSatish Balay   ierr = MatScale(aa,a->A);CHKERRQ(ierr);
959a30f8f8cSSatish Balay   ierr = MatScale(aa,a->B);CHKERRQ(ierr);
960a30f8f8cSSatish Balay   PetscFunctionReturn(0);
961a30f8f8cSSatish Balay }
962a30f8f8cSSatish Balay 
9634a2ae208SSatish Balay #undef __FUNCT__
9644a2ae208SSatish Balay #define __FUNCT__ "MatGetRow_MPISBAIJ"
96587828ca2SBarry Smith int MatGetRow_MPISBAIJ(Mat matin,int row,int *nz,int **idx,PetscScalar **v)
966a30f8f8cSSatish Balay {
967a30f8f8cSSatish Balay   Mat_MPISBAIJ   *mat = (Mat_MPISBAIJ*)matin->data;
96887828ca2SBarry Smith   PetscScalar    *vworkA,*vworkB,**pvA,**pvB,*v_p;
969a30f8f8cSSatish Balay   int            bs = mat->bs,bs2 = mat->bs2,i,ierr,*cworkA,*cworkB,**pcA,**pcB;
970a30f8f8cSSatish Balay   int            nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
971a30f8f8cSSatish Balay   int            *cmap,*idx_p,cstart = mat->cstart;
972a30f8f8cSSatish Balay 
973a30f8f8cSSatish Balay   PetscFunctionBegin;
97429bbc08cSBarry Smith   if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
975a30f8f8cSSatish Balay   mat->getrowactive = PETSC_TRUE;
976a30f8f8cSSatish Balay 
977a30f8f8cSSatish Balay   if (!mat->rowvalues && (idx || v)) {
978a30f8f8cSSatish Balay     /*
979a30f8f8cSSatish Balay         allocate enough space to hold information from the longest row.
980a30f8f8cSSatish Balay     */
981a30f8f8cSSatish Balay     Mat_SeqSBAIJ *Aa = (Mat_SeqSBAIJ*)mat->A->data;
982a30f8f8cSSatish Balay     Mat_SeqBAIJ  *Ba = (Mat_SeqBAIJ*)mat->B->data;
983a30f8f8cSSatish Balay     int     max = 1,mbs = mat->mbs,tmp;
984a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
985a30f8f8cSSatish Balay       tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i]; /* row length */
986a30f8f8cSSatish Balay       if (max < tmp) { max = tmp; }
987a30f8f8cSSatish Balay     }
98887828ca2SBarry Smith     ierr = PetscMalloc(max*bs2*(sizeof(int)+sizeof(PetscScalar)),&mat->rowvalues);CHKERRQ(ierr);
989a30f8f8cSSatish Balay     mat->rowindices = (int*)(mat->rowvalues + max*bs2);
990a30f8f8cSSatish Balay   }
991a30f8f8cSSatish Balay 
99229bbc08cSBarry Smith   if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
993a30f8f8cSSatish Balay   lrow = row - brstart;  /* local row index */
994a30f8f8cSSatish Balay 
995a30f8f8cSSatish Balay   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
996a30f8f8cSSatish Balay   if (!v)   {pvA = 0; pvB = 0;}
997a30f8f8cSSatish Balay   if (!idx) {pcA = 0; if (!v) pcB = 0;}
998a30f8f8cSSatish Balay   ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
999a30f8f8cSSatish Balay   ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1000a30f8f8cSSatish Balay   nztot = nzA + nzB;
1001a30f8f8cSSatish Balay 
1002a30f8f8cSSatish Balay   cmap  = mat->garray;
1003a30f8f8cSSatish Balay   if (v  || idx) {
1004a30f8f8cSSatish Balay     if (nztot) {
1005a30f8f8cSSatish Balay       /* Sort by increasing column numbers, assuming A and B already sorted */
1006a30f8f8cSSatish Balay       int imark = -1;
1007a30f8f8cSSatish Balay       if (v) {
1008a30f8f8cSSatish Balay         *v = v_p = mat->rowvalues;
1009a30f8f8cSSatish Balay         for (i=0; i<nzB; i++) {
1010a30f8f8cSSatish Balay           if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
1011a30f8f8cSSatish Balay           else break;
1012a30f8f8cSSatish Balay         }
1013a30f8f8cSSatish Balay         imark = i;
1014a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
1015a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
1016a30f8f8cSSatish Balay       }
1017a30f8f8cSSatish Balay       if (idx) {
1018a30f8f8cSSatish Balay         *idx = idx_p = mat->rowindices;
1019a30f8f8cSSatish Balay         if (imark > -1) {
1020a30f8f8cSSatish Balay           for (i=0; i<imark; i++) {
1021a30f8f8cSSatish Balay             idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
1022a30f8f8cSSatish Balay           }
1023a30f8f8cSSatish Balay         } else {
1024a30f8f8cSSatish Balay           for (i=0; i<nzB; i++) {
1025a30f8f8cSSatish Balay             if (cmap[cworkB[i]/bs] < cstart)
1026a30f8f8cSSatish Balay               idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1027a30f8f8cSSatish Balay             else break;
1028a30f8f8cSSatish Balay           }
1029a30f8f8cSSatish Balay           imark = i;
1030a30f8f8cSSatish Balay         }
1031a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
1032a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1033a30f8f8cSSatish Balay       }
1034a30f8f8cSSatish Balay     } else {
1035a30f8f8cSSatish Balay       if (idx) *idx = 0;
1036a30f8f8cSSatish Balay       if (v)   *v   = 0;
1037a30f8f8cSSatish Balay     }
1038a30f8f8cSSatish Balay   }
1039a30f8f8cSSatish Balay   *nz = nztot;
1040a30f8f8cSSatish Balay   ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1041a30f8f8cSSatish Balay   ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1042a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1043a30f8f8cSSatish Balay }
1044a30f8f8cSSatish Balay 
10454a2ae208SSatish Balay #undef __FUNCT__
10464a2ae208SSatish Balay #define __FUNCT__ "MatRestoreRow_MPISBAIJ"
104787828ca2SBarry Smith int MatRestoreRow_MPISBAIJ(Mat mat,int row,int *nz,int **idx,PetscScalar **v)
1048a30f8f8cSSatish Balay {
1049a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1050a30f8f8cSSatish Balay 
1051a30f8f8cSSatish Balay   PetscFunctionBegin;
1052a30f8f8cSSatish Balay   if (baij->getrowactive == PETSC_FALSE) {
105329bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
1054a30f8f8cSSatish Balay   }
1055a30f8f8cSSatish Balay   baij->getrowactive = PETSC_FALSE;
1056a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1057a30f8f8cSSatish Balay }
1058a30f8f8cSSatish Balay 
10594a2ae208SSatish Balay #undef __FUNCT__
10604a2ae208SSatish Balay #define __FUNCT__ "MatGetBlockSize_MPISBAIJ"
1061a30f8f8cSSatish Balay int MatGetBlockSize_MPISBAIJ(Mat mat,int *bs)
1062a30f8f8cSSatish Balay {
1063a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1064a30f8f8cSSatish Balay 
1065a30f8f8cSSatish Balay   PetscFunctionBegin;
1066a30f8f8cSSatish Balay   *bs = baij->bs;
1067a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1068a30f8f8cSSatish Balay }
1069a30f8f8cSSatish Balay 
10704a2ae208SSatish Balay #undef __FUNCT__
10714a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_MPISBAIJ"
1072a30f8f8cSSatish Balay int MatZeroEntries_MPISBAIJ(Mat A)
1073a30f8f8cSSatish Balay {
1074a30f8f8cSSatish Balay   Mat_MPISBAIJ *l = (Mat_MPISBAIJ*)A->data;
1075a30f8f8cSSatish Balay   int         ierr;
1076a30f8f8cSSatish Balay 
1077a30f8f8cSSatish Balay   PetscFunctionBegin;
1078a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
1079a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
1080a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1081a30f8f8cSSatish Balay }
1082a30f8f8cSSatish Balay 
10834a2ae208SSatish Balay #undef __FUNCT__
10844a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_MPISBAIJ"
1085a30f8f8cSSatish Balay int MatGetInfo_MPISBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
1086a30f8f8cSSatish Balay {
1087a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)matin->data;
1088a30f8f8cSSatish Balay   Mat         A = a->A,B = a->B;
1089a30f8f8cSSatish Balay   int         ierr;
1090a30f8f8cSSatish Balay   PetscReal   isend[5],irecv[5];
1091a30f8f8cSSatish Balay 
1092a30f8f8cSSatish Balay   PetscFunctionBegin;
1093f6275e2eSBarry Smith   info->block_size     = (PetscReal)a->bs;
1094a30f8f8cSSatish Balay   ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
1095a30f8f8cSSatish Balay   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
1096a30f8f8cSSatish Balay   isend[3] = info->memory;  isend[4] = info->mallocs;
1097a30f8f8cSSatish Balay   ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
1098a30f8f8cSSatish Balay   isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
1099a30f8f8cSSatish Balay   isend[3] += info->memory;  isend[4] += info->mallocs;
1100a30f8f8cSSatish Balay   if (flag == MAT_LOCAL) {
1101a30f8f8cSSatish Balay     info->nz_used      = isend[0];
1102a30f8f8cSSatish Balay     info->nz_allocated = isend[1];
1103a30f8f8cSSatish Balay     info->nz_unneeded  = isend[2];
1104a30f8f8cSSatish Balay     info->memory       = isend[3];
1105a30f8f8cSSatish Balay     info->mallocs      = isend[4];
1106a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_MAX) {
1107d7d1e502SBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPI_MAX,matin->comm);CHKERRQ(ierr);
1108a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1109a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1110a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1111a30f8f8cSSatish Balay     info->memory       = irecv[3];
1112a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1113a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_SUM) {
1114d7d1e502SBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPI_SUM,matin->comm);CHKERRQ(ierr);
1115a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1116a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1117a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1118a30f8f8cSSatish Balay     info->memory       = irecv[3];
1119a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1120a30f8f8cSSatish Balay   } else {
112129bbc08cSBarry Smith     SETERRQ1(1,"Unknown MatInfoType argument %d",flag);
1122a30f8f8cSSatish Balay   }
1123f6275e2eSBarry Smith   info->rows_global       = (PetscReal)A->M;
1124f6275e2eSBarry Smith   info->columns_global    = (PetscReal)A->N;
1125f6275e2eSBarry Smith   info->rows_local        = (PetscReal)A->m;
1126f6275e2eSBarry Smith   info->columns_local     = (PetscReal)A->N;
1127a30f8f8cSSatish Balay   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
1128a30f8f8cSSatish Balay   info->fill_ratio_needed = 0;
1129a30f8f8cSSatish Balay   info->factor_mallocs    = 0;
1130a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1131a30f8f8cSSatish Balay }
1132a30f8f8cSSatish Balay 
11334a2ae208SSatish Balay #undef __FUNCT__
11344a2ae208SSatish Balay #define __FUNCT__ "MatSetOption_MPISBAIJ"
1135a30f8f8cSSatish Balay int MatSetOption_MPISBAIJ(Mat A,MatOption op)
1136a30f8f8cSSatish Balay {
1137a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1138a30f8f8cSSatish Balay   int         ierr;
1139a30f8f8cSSatish Balay 
1140a30f8f8cSSatish Balay   PetscFunctionBegin;
1141e98b92d7SKris Buschelman   switch (op) {
1142e98b92d7SKris Buschelman   case MAT_NO_NEW_NONZERO_LOCATIONS:
1143e98b92d7SKris Buschelman   case MAT_YES_NEW_NONZERO_LOCATIONS:
1144e98b92d7SKris Buschelman   case MAT_COLUMNS_UNSORTED:
1145e98b92d7SKris Buschelman   case MAT_COLUMNS_SORTED:
1146e98b92d7SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
1147e98b92d7SKris Buschelman   case MAT_KEEP_ZEROED_ROWS:
1148e98b92d7SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
1149a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1150a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1151e98b92d7SKris Buschelman     break;
1152e98b92d7SKris Buschelman   case MAT_ROW_ORIENTED:
1153a30f8f8cSSatish Balay     a->roworiented = PETSC_TRUE;
1154a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1155a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1156e98b92d7SKris Buschelman     break;
1157e98b92d7SKris Buschelman   case MAT_ROWS_SORTED:
1158e98b92d7SKris Buschelman   case MAT_ROWS_UNSORTED:
1159e98b92d7SKris Buschelman   case MAT_YES_NEW_DIAGONALS:
1160d03495bdSKris Buschelman   case MAT_USE_SINGLE_PRECISION_SOLVES:
1161b0a32e0cSBarry Smith     PetscLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
1162e98b92d7SKris Buschelman     break;
1163e98b92d7SKris Buschelman   case MAT_COLUMN_ORIENTED:
1164a30f8f8cSSatish Balay     a->roworiented = PETSC_FALSE;
1165a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1166a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1167e98b92d7SKris Buschelman     break;
1168e98b92d7SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
1169a30f8f8cSSatish Balay     a->donotstash = PETSC_TRUE;
1170e98b92d7SKris Buschelman     break;
1171e98b92d7SKris Buschelman   case MAT_NO_NEW_DIAGONALS:
117229bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
1173e98b92d7SKris Buschelman     break;
1174e98b92d7SKris Buschelman   case MAT_USE_HASH_TABLE:
1175a30f8f8cSSatish Balay     a->ht_flag = PETSC_TRUE;
1176e98b92d7SKris Buschelman     break;
1177e98b92d7SKris Buschelman   default:
117829bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"unknown option");
1179e98b92d7SKris Buschelman     break;
1180a30f8f8cSSatish Balay   }
1181a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1182a30f8f8cSSatish Balay }
1183a30f8f8cSSatish Balay 
11844a2ae208SSatish Balay #undef __FUNCT__
11854a2ae208SSatish Balay #define __FUNCT__ "MatTranspose_MPISBAIJ("
1186a30f8f8cSSatish Balay int MatTranspose_MPISBAIJ(Mat A,Mat *matout)
1187a30f8f8cSSatish Balay {
1188a30f8f8cSSatish Balay   PetscFunctionBegin;
118929bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. MatTranspose() should not be called");
119096e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
1191a30f8f8cSSatish Balay }
1192a30f8f8cSSatish Balay 
11934a2ae208SSatish Balay #undef __FUNCT__
11944a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_MPISBAIJ"
1195a30f8f8cSSatish Balay int MatDiagonalScale_MPISBAIJ(Mat mat,Vec ll,Vec rr)
1196a30f8f8cSSatish Balay {
1197a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1198a30f8f8cSSatish Balay   Mat         a = baij->A,b = baij->B;
1199a30f8f8cSSatish Balay   int         ierr,s1,s2,s3;
1200a30f8f8cSSatish Balay 
1201a30f8f8cSSatish Balay   PetscFunctionBegin;
1202a30f8f8cSSatish Balay   if (ll != rr) {
120329bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n");
1204a30f8f8cSSatish Balay   }
1205a30f8f8cSSatish Balay   ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
1206a30f8f8cSSatish Balay   if (rr) {
1207a30f8f8cSSatish Balay     ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
120829bbc08cSBarry Smith     if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
1209a30f8f8cSSatish Balay     /* Overlap communication with computation. */
1210a30f8f8cSSatish Balay     ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1211a30f8f8cSSatish Balay     /*} if (ll) { */
1212a30f8f8cSSatish Balay     ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
121329bbc08cSBarry Smith     if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
1214a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
1215a30f8f8cSSatish Balay     /* } */
1216a30f8f8cSSatish Balay   /* scale  the diagonal block */
1217a30f8f8cSSatish Balay   ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);
1218a30f8f8cSSatish Balay 
1219a30f8f8cSSatish Balay   /* if (rr) { */
1220a30f8f8cSSatish Balay     /* Do a scatter end and then right scale the off-diagonal block */
1221a30f8f8cSSatish Balay     ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1222a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
1223a30f8f8cSSatish Balay   }
1224a30f8f8cSSatish Balay 
1225a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1226a30f8f8cSSatish Balay }
1227a30f8f8cSSatish Balay 
12284a2ae208SSatish Balay #undef __FUNCT__
12294a2ae208SSatish Balay #define __FUNCT__ "MatZeroRows_MPISBAIJ"
123087828ca2SBarry Smith int MatZeroRows_MPISBAIJ(Mat A,IS is,PetscScalar *diag)
1231a30f8f8cSSatish Balay {
1232a30f8f8cSSatish Balay   Mat_MPISBAIJ   *l = (Mat_MPISBAIJ*)A->data;
1233a30f8f8cSSatish Balay   int            i,ierr,N,*rows,*owners = l->rowners,size = l->size;
123435d8aa7fSBarry Smith   int            *procs,*nprocs,j,idx,nsends,*work,row;
1235a30f8f8cSSatish Balay   int            nmax,*svalues,*starts,*owner,nrecvs,rank = l->rank;
1236a30f8f8cSSatish Balay   int            *rvalues,tag = A->tag,count,base,slen,n,*source;
1237a30f8f8cSSatish Balay   int            *lens,imdex,*lrows,*values,bs=l->bs,rstart_bs=l->rstart_bs;
1238a30f8f8cSSatish Balay   MPI_Comm       comm = A->comm;
1239a30f8f8cSSatish Balay   MPI_Request    *send_waits,*recv_waits;
1240a30f8f8cSSatish Balay   MPI_Status     recv_status,*send_status;
1241a30f8f8cSSatish Balay   IS             istmp;
124235d8aa7fSBarry Smith   PetscTruth     found;
1243a30f8f8cSSatish Balay 
1244a30f8f8cSSatish Balay   PetscFunctionBegin;
1245a30f8f8cSSatish Balay   ierr = ISGetSize(is,&N);CHKERRQ(ierr);
1246a30f8f8cSSatish Balay   ierr = ISGetIndices(is,&rows);CHKERRQ(ierr);
1247a30f8f8cSSatish Balay 
1248a30f8f8cSSatish Balay   /*  first count number of contributors to each processor */
124982502324SSatish Balay   ierr  = PetscMalloc(2*size*sizeof(int),&nprocs);CHKERRQ(ierr);
1250a30f8f8cSSatish Balay   ierr  = PetscMemzero(nprocs,2*size*sizeof(int));CHKERRQ(ierr);
1251a30f8f8cSSatish Balay   procs = nprocs + size;
1252b0a32e0cSBarry Smith   ierr  = PetscMalloc((N+1)*sizeof(int),&owner);CHKERRQ(ierr); /* see note*/
1253a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1254a30f8f8cSSatish Balay     idx   = rows[i];
125535d8aa7fSBarry Smith     found = PETSC_FALSE;
1256a30f8f8cSSatish Balay     for (j=0; j<size; j++) {
1257a30f8f8cSSatish Balay       if (idx >= owners[j]*bs && idx < owners[j+1]*bs) {
125835d8aa7fSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = PETSC_TRUE; break;
1259a30f8f8cSSatish Balay       }
1260a30f8f8cSSatish Balay     }
126129bbc08cSBarry Smith     if (!found) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
1262a30f8f8cSSatish Balay   }
1263a30f8f8cSSatish Balay   nsends = 0;  for (i=0; i<size; i++) { nsends += procs[i];}
1264a30f8f8cSSatish Balay 
1265a30f8f8cSSatish Balay   /* inform other processors of number of messages and max length*/
126682502324SSatish Balay   ierr   = PetscMalloc(2*size*sizeof(int),&work);CHKERRQ(ierr);
1267a30f8f8cSSatish Balay   ierr   = MPI_Allreduce(nprocs,work,2*size,MPI_INT,PetscMaxSum_Op,comm);CHKERRQ(ierr);
1268a30f8f8cSSatish Balay   nmax   = work[rank];
1269a30f8f8cSSatish Balay   nrecvs = work[size+rank];
1270a30f8f8cSSatish Balay   ierr   = PetscFree(work);CHKERRQ(ierr);
1271a30f8f8cSSatish Balay 
1272a30f8f8cSSatish Balay   /* post receives:   */
1273b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*(nmax+1)*sizeof(int),&rvalues);CHKERRQ(ierr);
1274b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
1275a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1276a30f8f8cSSatish Balay     ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPI_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
1277a30f8f8cSSatish Balay   }
1278a30f8f8cSSatish Balay 
1279a30f8f8cSSatish Balay   /* do sends:
1280a30f8f8cSSatish Balay      1) starts[i] gives the starting index in svalues for stuff going to
1281a30f8f8cSSatish Balay      the ith processor
1282a30f8f8cSSatish Balay   */
1283b0a32e0cSBarry Smith   ierr = PetscMalloc((N+1)*sizeof(int),&svalues);CHKERRQ(ierr);
1284b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
1285b0a32e0cSBarry Smith   ierr = PetscMalloc((size+1)*sizeof(int),&starts);CHKERRQ(ierr);
1286a30f8f8cSSatish Balay   starts[0]  = 0;
1287a30f8f8cSSatish Balay   for (i=1; i<size; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1288a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1289a30f8f8cSSatish Balay     svalues[starts[owner[i]]++] = rows[i];
1290a30f8f8cSSatish Balay   }
1291a30f8f8cSSatish Balay   ierr = ISRestoreIndices(is,&rows);CHKERRQ(ierr);
1292a30f8f8cSSatish Balay 
1293a30f8f8cSSatish Balay   starts[0] = 0;
1294a30f8f8cSSatish Balay   for (i=1; i<size+1; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1295a30f8f8cSSatish Balay   count = 0;
1296a30f8f8cSSatish Balay   for (i=0; i<size; i++) {
1297a30f8f8cSSatish Balay     if (procs[i]) {
1298a30f8f8cSSatish Balay       ierr = MPI_Isend(svalues+starts[i],nprocs[i],MPI_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
1299a30f8f8cSSatish Balay     }
1300a30f8f8cSSatish Balay   }
1301a30f8f8cSSatish Balay   ierr = PetscFree(starts);CHKERRQ(ierr);
1302a30f8f8cSSatish Balay 
1303a30f8f8cSSatish Balay   base = owners[rank]*bs;
1304a30f8f8cSSatish Balay 
1305a30f8f8cSSatish Balay   /*  wait on receives */
1306b0a32e0cSBarry Smith   ierr   = PetscMalloc(2*(nrecvs+1)*sizeof(int),&lens);CHKERRQ(ierr);
1307a30f8f8cSSatish Balay   source = lens + nrecvs;
1308a30f8f8cSSatish Balay   count  = nrecvs; slen = 0;
1309a30f8f8cSSatish Balay   while (count) {
1310a30f8f8cSSatish Balay     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
1311a30f8f8cSSatish Balay     /* unpack receives into our local space */
1312a30f8f8cSSatish Balay     ierr = MPI_Get_count(&recv_status,MPI_INT,&n);CHKERRQ(ierr);
1313a30f8f8cSSatish Balay     source[imdex]  = recv_status.MPI_SOURCE;
1314a30f8f8cSSatish Balay     lens[imdex]    = n;
1315a30f8f8cSSatish Balay     slen          += n;
1316a30f8f8cSSatish Balay     count--;
1317a30f8f8cSSatish Balay   }
1318a30f8f8cSSatish Balay   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
1319a30f8f8cSSatish Balay 
1320a30f8f8cSSatish Balay   /* move the data into the send scatter */
1321b0a32e0cSBarry Smith   ierr = PetscMalloc((slen+1)*sizeof(int),&lrows);CHKERRQ(ierr);
1322a30f8f8cSSatish Balay   count = 0;
1323a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1324a30f8f8cSSatish Balay     values = rvalues + i*nmax;
1325a30f8f8cSSatish Balay     for (j=0; j<lens[i]; j++) {
1326a30f8f8cSSatish Balay       lrows[count++] = values[j] - base;
1327a30f8f8cSSatish Balay     }
1328a30f8f8cSSatish Balay   }
1329a30f8f8cSSatish Balay   ierr = PetscFree(rvalues);CHKERRQ(ierr);
1330a30f8f8cSSatish Balay   ierr = PetscFree(lens);CHKERRQ(ierr);
1331a30f8f8cSSatish Balay   ierr = PetscFree(owner);CHKERRQ(ierr);
1332a30f8f8cSSatish Balay   ierr = PetscFree(nprocs);CHKERRQ(ierr);
1333a30f8f8cSSatish Balay 
1334a30f8f8cSSatish Balay   /* actually zap the local rows */
1335a30f8f8cSSatish Balay   ierr = ISCreateGeneral(PETSC_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
1336b0a32e0cSBarry Smith   PetscLogObjectParent(A,istmp);
1337a30f8f8cSSatish Balay 
1338a30f8f8cSSatish Balay   /*
1339a30f8f8cSSatish Balay         Zero the required rows. If the "diagonal block" of the matrix
1340a30f8f8cSSatish Balay      is square and the user wishes to set the diagonal we use seperate
1341a30f8f8cSSatish Balay      code so that MatSetValues() is not called for each diagonal allocating
1342a30f8f8cSSatish Balay      new memory, thus calling lots of mallocs and slowing things down.
1343a30f8f8cSSatish Balay 
1344a30f8f8cSSatish Balay        Contributed by: Mathew Knepley
1345a30f8f8cSSatish Balay   */
1346a30f8f8cSSatish Balay   /* must zero l->B before l->A because the (diag) case below may put values into l->B*/
1347ff64ff16SBarry Smith   ierr = MatZeroRows_SeqBAIJ(l->B,istmp,0);CHKERRQ(ierr);
1348a30f8f8cSSatish Balay   if (diag && (l->A->M == l->A->N)) {
1349a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,diag);CHKERRQ(ierr);
1350a30f8f8cSSatish Balay   } else if (diag) {
1351a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1352a30f8f8cSSatish Balay     if (((Mat_SeqSBAIJ*)l->A->data)->nonew) {
135329bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\
1354a30f8f8cSSatish Balay MAT_NO_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR");
1355a30f8f8cSSatish Balay     }
1356a30f8f8cSSatish Balay     for (i=0; i<slen; i++) {
1357a30f8f8cSSatish Balay       row  = lrows[i] + rstart_bs;
1358a30f8f8cSSatish Balay       ierr = MatSetValues(A,1,&row,1,&row,diag,INSERT_VALUES);CHKERRQ(ierr);
1359a30f8f8cSSatish Balay     }
1360a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1361a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1362a30f8f8cSSatish Balay   } else {
1363a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1364a30f8f8cSSatish Balay   }
1365a30f8f8cSSatish Balay 
1366a30f8f8cSSatish Balay   ierr = ISDestroy(istmp);CHKERRQ(ierr);
1367a30f8f8cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
1368a30f8f8cSSatish Balay 
1369a30f8f8cSSatish Balay   /* wait on sends */
1370a30f8f8cSSatish Balay   if (nsends) {
137182502324SSatish Balay     ierr = PetscMalloc(nsends*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
1372a30f8f8cSSatish Balay     ierr        = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
1373a30f8f8cSSatish Balay     ierr        = PetscFree(send_status);CHKERRQ(ierr);
1374a30f8f8cSSatish Balay   }
1375a30f8f8cSSatish Balay   ierr = PetscFree(send_waits);CHKERRQ(ierr);
1376a30f8f8cSSatish Balay   ierr = PetscFree(svalues);CHKERRQ(ierr);
1377a30f8f8cSSatish Balay 
1378a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1379a30f8f8cSSatish Balay }
1380a30f8f8cSSatish Balay 
13814a2ae208SSatish Balay #undef __FUNCT__
13824a2ae208SSatish Balay #define __FUNCT__ "MatPrintHelp_MPISBAIJ"
1383a30f8f8cSSatish Balay int MatPrintHelp_MPISBAIJ(Mat A)
1384a30f8f8cSSatish Balay {
1385a30f8f8cSSatish Balay   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1386a30f8f8cSSatish Balay   MPI_Comm    comm = A->comm;
1387a30f8f8cSSatish Balay   static int  called = 0;
1388a30f8f8cSSatish Balay   int         ierr;
1389a30f8f8cSSatish Balay 
1390a30f8f8cSSatish Balay   PetscFunctionBegin;
1391a30f8f8cSSatish Balay   if (!a->rank) {
1392a30f8f8cSSatish Balay     ierr = MatPrintHelp_SeqSBAIJ(a->A);CHKERRQ(ierr);
1393a30f8f8cSSatish Balay   }
1394a30f8f8cSSatish Balay   if (called) {PetscFunctionReturn(0);} else called = 1;
1395a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm," Options for MATMPISBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
1396a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
1397a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1398a30f8f8cSSatish Balay }
1399a30f8f8cSSatish Balay 
14004a2ae208SSatish Balay #undef __FUNCT__
14014a2ae208SSatish Balay #define __FUNCT__ "MatSetUnfactored_MPISBAIJ"
1402a30f8f8cSSatish Balay int MatSetUnfactored_MPISBAIJ(Mat A)
1403a30f8f8cSSatish Balay {
1404f3566a2aSHong Zhang   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1405a30f8f8cSSatish Balay   int         ierr;
1406a30f8f8cSSatish Balay 
1407a30f8f8cSSatish Balay   PetscFunctionBegin;
1408a30f8f8cSSatish Balay   ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
1409a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1410a30f8f8cSSatish Balay }
1411a30f8f8cSSatish Balay 
1412a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat,MatDuplicateOption,Mat *);
1413a30f8f8cSSatish Balay 
14144a2ae208SSatish Balay #undef __FUNCT__
14154a2ae208SSatish Balay #define __FUNCT__ "MatEqual_MPISBAIJ"
1416a30f8f8cSSatish Balay int MatEqual_MPISBAIJ(Mat A,Mat B,PetscTruth *flag)
1417a30f8f8cSSatish Balay {
1418a30f8f8cSSatish Balay   Mat_MPISBAIJ *matB = (Mat_MPISBAIJ*)B->data,*matA = (Mat_MPISBAIJ*)A->data;
1419a30f8f8cSSatish Balay   Mat         a,b,c,d;
1420a30f8f8cSSatish Balay   PetscTruth  flg;
1421a30f8f8cSSatish Balay   int         ierr;
1422a30f8f8cSSatish Balay 
1423a30f8f8cSSatish Balay   PetscFunctionBegin;
1424b5df2d14SHong Zhang   ierr = PetscTypeCompare((PetscObject)B,MATMPISBAIJ,&flg);CHKERRQ(ierr);
1425b5df2d14SHong Zhang   if (!flg) SETERRQ(PETSC_ERR_ARG_INCOMP,"Matrices must be same type");
1426a30f8f8cSSatish Balay   a = matA->A; b = matA->B;
1427a30f8f8cSSatish Balay   c = matB->A; d = matB->B;
1428a30f8f8cSSatish Balay 
1429a30f8f8cSSatish Balay   ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
1430a30f8f8cSSatish Balay   if (flg == PETSC_TRUE) {
1431a30f8f8cSSatish Balay     ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
1432a30f8f8cSSatish Balay   }
1433a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
1434a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1435a30f8f8cSSatish Balay }
1436a30f8f8cSSatish Balay 
14374a2ae208SSatish Balay #undef __FUNCT__
14384a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation_MPISBAIJ"
1439273d9f13SBarry Smith int MatSetUpPreallocation_MPISBAIJ(Mat A)
1440273d9f13SBarry Smith {
1441273d9f13SBarry Smith   int        ierr;
1442273d9f13SBarry Smith 
1443273d9f13SBarry Smith   PetscFunctionBegin;
1444273d9f13SBarry Smith   ierr = MatMPISBAIJSetPreallocation(A,1,PETSC_DEFAULT,0,PETSC_DEFAULT,0);CHKERRQ(ierr);
1445273d9f13SBarry Smith   PetscFunctionReturn(0);
1446273d9f13SBarry Smith }
1447a30f8f8cSSatish Balay /* -------------------------------------------------------------------*/
1448a30f8f8cSSatish Balay static struct _MatOps MatOps_Values = {
1449a30f8f8cSSatish Balay   MatSetValues_MPISBAIJ,
1450a30f8f8cSSatish Balay   MatGetRow_MPISBAIJ,
1451a30f8f8cSSatish Balay   MatRestoreRow_MPISBAIJ,
1452a30f8f8cSSatish Balay   MatMult_MPISBAIJ,
1453a30f8f8cSSatish Balay   MatMultAdd_MPISBAIJ,
1454a30f8f8cSSatish Balay   MatMultTranspose_MPISBAIJ,
1455a30f8f8cSSatish Balay   MatMultTransposeAdd_MPISBAIJ,
1456a30f8f8cSSatish Balay   0,
1457a30f8f8cSSatish Balay   0,
1458a30f8f8cSSatish Balay   0,
1459a30f8f8cSSatish Balay   0,
1460a30f8f8cSSatish Balay   0,
1461a30f8f8cSSatish Balay   0,
14622798e883SHong Zhang   MatRelax_MPISBAIJ,
1463a30f8f8cSSatish Balay   MatTranspose_MPISBAIJ,
1464a30f8f8cSSatish Balay   MatGetInfo_MPISBAIJ,
1465a30f8f8cSSatish Balay   MatEqual_MPISBAIJ,
1466a30f8f8cSSatish Balay   MatGetDiagonal_MPISBAIJ,
1467a30f8f8cSSatish Balay   MatDiagonalScale_MPISBAIJ,
1468a30f8f8cSSatish Balay   MatNorm_MPISBAIJ,
1469a30f8f8cSSatish Balay   MatAssemblyBegin_MPISBAIJ,
1470a30f8f8cSSatish Balay   MatAssemblyEnd_MPISBAIJ,
1471a30f8f8cSSatish Balay   0,
1472a30f8f8cSSatish Balay   MatSetOption_MPISBAIJ,
1473a30f8f8cSSatish Balay   MatZeroEntries_MPISBAIJ,
1474a30f8f8cSSatish Balay   MatZeroRows_MPISBAIJ,
1475a30f8f8cSSatish Balay   0,
1476a30f8f8cSSatish Balay   0,
1477a30f8f8cSSatish Balay   0,
1478a30f8f8cSSatish Balay   0,
1479273d9f13SBarry Smith   MatSetUpPreallocation_MPISBAIJ,
1480b5df2d14SHong Zhang   0,
1481a30f8f8cSSatish Balay   0,
1482a30f8f8cSSatish Balay   0,
1483a30f8f8cSSatish Balay   0,
1484a30f8f8cSSatish Balay   MatDuplicate_MPISBAIJ,
1485a30f8f8cSSatish Balay   0,
1486a30f8f8cSSatish Balay   0,
1487a30f8f8cSSatish Balay   0,
1488a30f8f8cSSatish Balay   0,
1489a30f8f8cSSatish Balay   0,
1490a30f8f8cSSatish Balay   MatGetSubMatrices_MPISBAIJ,
1491a30f8f8cSSatish Balay   MatIncreaseOverlap_MPISBAIJ,
1492a30f8f8cSSatish Balay   MatGetValues_MPISBAIJ,
1493a30f8f8cSSatish Balay   0,
1494a30f8f8cSSatish Balay   MatPrintHelp_MPISBAIJ,
1495a30f8f8cSSatish Balay   MatScale_MPISBAIJ,
1496a30f8f8cSSatish Balay   0,
1497a30f8f8cSSatish Balay   0,
1498a30f8f8cSSatish Balay   0,
1499a30f8f8cSSatish Balay   MatGetBlockSize_MPISBAIJ,
1500a30f8f8cSSatish Balay   0,
1501a30f8f8cSSatish Balay   0,
1502a30f8f8cSSatish Balay   0,
1503a30f8f8cSSatish Balay   0,
1504a30f8f8cSSatish Balay   0,
1505a30f8f8cSSatish Balay   0,
1506a30f8f8cSSatish Balay   MatSetUnfactored_MPISBAIJ,
1507a30f8f8cSSatish Balay   0,
1508a30f8f8cSSatish Balay   MatSetValuesBlocked_MPISBAIJ,
1509a30f8f8cSSatish Balay   0,
1510a30f8f8cSSatish Balay   0,
1511a30f8f8cSSatish Balay   0,
15128a124369SBarry Smith   MatGetPetscMaps_Petsc,
151324d5174aSHong Zhang   0,
151424d5174aSHong Zhang   0,
151524d5174aSHong Zhang   0,
151624d5174aSHong Zhang   0,
151724d5174aSHong Zhang   0,
151824d5174aSHong Zhang   0,
151924d5174aSHong Zhang   MatGetRowMax_MPISBAIJ};
1520a30f8f8cSSatish Balay 
1521a30f8f8cSSatish Balay 
1522a30f8f8cSSatish Balay EXTERN_C_BEGIN
15234a2ae208SSatish Balay #undef __FUNCT__
15244a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonalBlock_MPISBAIJ"
1525a30f8f8cSSatish Balay int MatGetDiagonalBlock_MPISBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
1526a30f8f8cSSatish Balay {
1527a30f8f8cSSatish Balay   PetscFunctionBegin;
1528a30f8f8cSSatish Balay   *a      = ((Mat_MPISBAIJ *)A->data)->A;
1529a30f8f8cSSatish Balay   *iscopy = PETSC_FALSE;
1530a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1531a30f8f8cSSatish Balay }
1532a30f8f8cSSatish Balay EXTERN_C_END
1533a30f8f8cSSatish Balay 
1534273d9f13SBarry Smith EXTERN_C_BEGIN
15354a2ae208SSatish Balay #undef __FUNCT__
15364a2ae208SSatish Balay #define __FUNCT__ "MatCreate_MPISBAIJ"
1537b5df2d14SHong Zhang int MatCreate_MPISBAIJ(Mat B)
1538b5df2d14SHong Zhang {
1539b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1540ca54ac64SHong Zhang   int          ierr;
1541b5df2d14SHong Zhang   PetscTruth   flg;
1542b5df2d14SHong Zhang 
1543b5df2d14SHong Zhang   PetscFunctionBegin;
1544b5df2d14SHong Zhang 
1545b0a32e0cSBarry Smith   ierr    = PetscNew(Mat_MPISBAIJ,&b);CHKERRQ(ierr);
1546b0a32e0cSBarry Smith   B->data = (void*)b;
1547b5df2d14SHong Zhang   ierr    = PetscMemzero(b,sizeof(Mat_MPISBAIJ));CHKERRQ(ierr);
1548b5df2d14SHong Zhang   ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1549b5df2d14SHong Zhang 
1550b5df2d14SHong Zhang   B->ops->destroy    = MatDestroy_MPISBAIJ;
1551b5df2d14SHong Zhang   B->ops->view       = MatView_MPISBAIJ;
1552b5df2d14SHong Zhang   B->mapping    = 0;
1553b5df2d14SHong Zhang   B->factor     = 0;
1554b5df2d14SHong Zhang   B->assembled  = PETSC_FALSE;
1555b5df2d14SHong Zhang 
1556b5df2d14SHong Zhang   B->insertmode = NOT_SET_VALUES;
1557b5df2d14SHong Zhang   ierr = MPI_Comm_rank(B->comm,&b->rank);CHKERRQ(ierr);
1558b5df2d14SHong Zhang   ierr = MPI_Comm_size(B->comm,&b->size);CHKERRQ(ierr);
1559b5df2d14SHong Zhang 
1560b5df2d14SHong Zhang   /* build local table of row and column ownerships */
156182502324SSatish Balay   ierr          = PetscMalloc(3*(b->size+2)*sizeof(int),&b->rowners);CHKERRQ(ierr);
1562273d9f13SBarry Smith   b->cowners    = b->rowners + b->size + 2;
1563273d9f13SBarry Smith   b->rowners_bs = b->cowners + b->size + 2;
1564b0a32e0cSBarry Smith   PetscLogObjectMemory(B,3*(b->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1565b5df2d14SHong Zhang 
1566b5df2d14SHong Zhang   /* build cache for off array entries formed */
1567b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
1568b5df2d14SHong Zhang   b->donotstash  = PETSC_FALSE;
1569b5df2d14SHong Zhang   b->colmap      = PETSC_NULL;
1570b5df2d14SHong Zhang   b->garray      = PETSC_NULL;
1571b5df2d14SHong Zhang   b->roworiented = PETSC_TRUE;
1572b5df2d14SHong Zhang 
1573f2a5309cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
1574b5df2d14SHong Zhang   /* stuff for MatSetValues_XXX in single precision */
157564a35ccbSBarry Smith   b->setvalueslen     = 0;
1576b5df2d14SHong Zhang   b->setvaluescopy    = PETSC_NULL;
1577b5df2d14SHong Zhang #endif
1578b5df2d14SHong Zhang 
1579b5df2d14SHong Zhang   /* stuff used in block assembly */
1580b5df2d14SHong Zhang   b->barray       = 0;
1581b5df2d14SHong Zhang 
1582b5df2d14SHong Zhang   /* stuff used for matrix vector multiply */
1583b5df2d14SHong Zhang   b->lvec         = 0;
1584b5df2d14SHong Zhang   b->Mvctx        = 0;
1585b5df2d14SHong Zhang 
1586b5df2d14SHong Zhang   /* stuff for MatGetRow() */
1587b5df2d14SHong Zhang   b->rowindices   = 0;
1588b5df2d14SHong Zhang   b->rowvalues    = 0;
1589b5df2d14SHong Zhang   b->getrowactive = PETSC_FALSE;
1590b5df2d14SHong Zhang 
1591b5df2d14SHong Zhang   /* hash table stuff */
1592b5df2d14SHong Zhang   b->ht           = 0;
1593b5df2d14SHong Zhang   b->hd           = 0;
1594b5df2d14SHong Zhang   b->ht_size      = 0;
1595b5df2d14SHong Zhang   b->ht_flag      = PETSC_FALSE;
1596b5df2d14SHong Zhang   b->ht_fact      = 0;
1597b5df2d14SHong Zhang   b->ht_total_ct  = 0;
1598b5df2d14SHong Zhang   b->ht_insert_ct = 0;
1599b5df2d14SHong Zhang 
1600b0a32e0cSBarry Smith   ierr = PetscOptionsHasName(PETSC_NULL,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
1601b5df2d14SHong Zhang   if (flg) {
1602f6275e2eSBarry Smith     PetscReal fact = 1.39;
1603b5df2d14SHong Zhang     ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
160487828ca2SBarry Smith     ierr = PetscOptionsGetReal(PETSC_NULL,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
1605b5df2d14SHong Zhang     if (fact <= 1.0) fact = 1.39;
1606b5df2d14SHong Zhang     ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
1607b0a32e0cSBarry Smith     PetscLogInfo(0,"MatCreateMPISBAIJ:Hash table Factor used %5.2f\n",fact);
1608b5df2d14SHong Zhang   }
1609b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
1610b5df2d14SHong Zhang                                      "MatStoreValues_MPISBAIJ",
1611b5df2d14SHong Zhang                                      MatStoreValues_MPISBAIJ);CHKERRQ(ierr);
1612b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
1613b5df2d14SHong Zhang                                      "MatRetrieveValues_MPISBAIJ",
1614b5df2d14SHong Zhang                                      MatRetrieveValues_MPISBAIJ);CHKERRQ(ierr);
1615b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
1616b5df2d14SHong Zhang                                      "MatGetDiagonalBlock_MPISBAIJ",
1617b5df2d14SHong Zhang                                      MatGetDiagonalBlock_MPISBAIJ);CHKERRQ(ierr);
1618b5df2d14SHong Zhang   PetscFunctionReturn(0);
1619b5df2d14SHong Zhang }
1620273d9f13SBarry Smith EXTERN_C_END
1621b5df2d14SHong Zhang 
16224a2ae208SSatish Balay #undef __FUNCT__
16234a2ae208SSatish Balay #define __FUNCT__ "MatMPISBAIJSetPreallocation"
1624b5df2d14SHong Zhang /*@C
1625b5df2d14SHong Zhang    MatMPISBAIJSetPreallocation - For good matrix assembly performance
1626b5df2d14SHong Zhang    the user should preallocate the matrix storage by setting the parameters
1627b5df2d14SHong Zhang    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1628b5df2d14SHong Zhang    performance can be increased by more than a factor of 50.
1629b5df2d14SHong Zhang 
1630b5df2d14SHong Zhang    Collective on Mat
1631b5df2d14SHong Zhang 
1632b5df2d14SHong Zhang    Input Parameters:
1633b5df2d14SHong Zhang +  A - the matrix
1634b5df2d14SHong Zhang .  bs   - size of blockk
1635b5df2d14SHong Zhang .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1636b5df2d14SHong Zhang            submatrix  (same for all local rows)
1637b5df2d14SHong Zhang .  d_nnz - array containing the number of block nonzeros in the various block rows
1638b5df2d14SHong Zhang            of the in diagonal portion of the local (possibly different for each block
1639b5df2d14SHong Zhang            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1640b5df2d14SHong Zhang .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1641b5df2d14SHong Zhang            submatrix (same for all local rows).
1642b5df2d14SHong Zhang -  o_nnz - array containing the number of nonzeros in the various block rows of the
1643b5df2d14SHong Zhang            off-diagonal portion of the local submatrix (possibly different for
1644b5df2d14SHong Zhang            each block row) or PETSC_NULL.
1645b5df2d14SHong Zhang 
1646b5df2d14SHong Zhang 
1647b5df2d14SHong Zhang    Options Database Keys:
1648b5df2d14SHong Zhang .   -mat_no_unroll - uses code that does not unroll the loops in the
1649b5df2d14SHong Zhang                      block calculations (much slower)
1650b5df2d14SHong Zhang .   -mat_block_size - size of the blocks to use
1651b5df2d14SHong Zhang 
1652b5df2d14SHong Zhang    Notes:
1653b5df2d14SHong Zhang 
1654b5df2d14SHong Zhang    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1655b5df2d14SHong Zhang    than it must be used on all processors that share the object for that argument.
1656b5df2d14SHong Zhang 
1657b5df2d14SHong Zhang    Storage Information:
1658b5df2d14SHong Zhang    For a square global matrix we define each processor's diagonal portion
1659b5df2d14SHong Zhang    to be its local rows and the corresponding columns (a square submatrix);
1660b5df2d14SHong Zhang    each processor's off-diagonal portion encompasses the remainder of the
1661b5df2d14SHong Zhang    local matrix (a rectangular submatrix).
1662b5df2d14SHong Zhang 
1663b5df2d14SHong Zhang    The user can specify preallocated storage for the diagonal part of
1664b5df2d14SHong Zhang    the local submatrix with either d_nz or d_nnz (not both).  Set
1665b5df2d14SHong Zhang    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1666b5df2d14SHong Zhang    memory allocation.  Likewise, specify preallocated storage for the
1667b5df2d14SHong Zhang    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1668b5df2d14SHong Zhang 
1669b5df2d14SHong Zhang    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1670b5df2d14SHong Zhang    the figure below we depict these three local rows and all columns (0-11).
1671b5df2d14SHong Zhang 
1672b5df2d14SHong Zhang .vb
1673b5df2d14SHong Zhang            0 1 2 3 4 5 6 7 8 9 10 11
1674b5df2d14SHong Zhang           -------------------
1675b5df2d14SHong Zhang    row 3  |  o o o d d d o o o o o o
1676b5df2d14SHong Zhang    row 4  |  o o o d d d o o o o o o
1677b5df2d14SHong Zhang    row 5  |  o o o d d d o o o o o o
1678b5df2d14SHong Zhang           -------------------
1679b5df2d14SHong Zhang .ve
1680b5df2d14SHong Zhang 
1681b5df2d14SHong Zhang    Thus, any entries in the d locations are stored in the d (diagonal)
1682b5df2d14SHong Zhang    submatrix, and any entries in the o locations are stored in the
1683b5df2d14SHong Zhang    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1684b5df2d14SHong Zhang    stored simply in the MATSEQBAIJ format for compressed row storage.
1685b5df2d14SHong Zhang 
1686b5df2d14SHong Zhang    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1687b5df2d14SHong Zhang    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1688b5df2d14SHong Zhang    In general, for PDE problems in which most nonzeros are near the diagonal,
1689b5df2d14SHong Zhang    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1690b5df2d14SHong Zhang    or you will get TERRIBLE performance; see the users' manual chapter on
1691b5df2d14SHong Zhang    matrices.
1692b5df2d14SHong Zhang 
1693b5df2d14SHong Zhang    Level: intermediate
1694b5df2d14SHong Zhang 
1695b5df2d14SHong Zhang .keywords: matrix, block, aij, compressed row, sparse, parallel
1696b5df2d14SHong Zhang 
1697b5df2d14SHong Zhang .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1698b5df2d14SHong Zhang @*/
1699b5df2d14SHong Zhang 
1700b5df2d14SHong Zhang int MatMPISBAIJSetPreallocation(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz)
1701b5df2d14SHong Zhang {
1702b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1703eb7adc28SSatish Balay   int          ierr,i,mbs,Mbs;
1704273d9f13SBarry Smith   PetscTruth   flg2;
1705b5df2d14SHong Zhang 
1706b5df2d14SHong Zhang   PetscFunctionBegin;
1707273d9f13SBarry Smith   ierr = PetscTypeCompare((PetscObject)B,MATMPISBAIJ,&flg2);CHKERRQ(ierr);
1708273d9f13SBarry Smith   if (!flg2) PetscFunctionReturn(0);
1709273d9f13SBarry Smith 
1710b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1711b5df2d14SHong Zhang 
1712b5df2d14SHong Zhang   if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
1713435da068SBarry Smith   if (d_nz == PETSC_DECIDE || d_nz == PETSC_DEFAULT) d_nz = 3;
1714435da068SBarry Smith   if (o_nz == PETSC_DECIDE || o_nz == PETSC_DEFAULT) o_nz = 1;
1715435da068SBarry Smith   if (d_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than 0: value %d",d_nz);
1716435da068SBarry Smith   if (o_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than 0: value %d",o_nz);
1717b5df2d14SHong Zhang   if (d_nnz) {
1718b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1719b5df2d14SHong Zhang       if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %d value %d",i,d_nnz[i]);
1720b5df2d14SHong Zhang     }
1721b5df2d14SHong Zhang   }
1722b5df2d14SHong Zhang   if (o_nnz) {
1723b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1724b5df2d14SHong Zhang       if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %d value %d",i,o_nnz[i]);
1725b5df2d14SHong Zhang     }
1726b5df2d14SHong Zhang   }
172719138431SHong Zhang   B->preallocated = PETSC_TRUE;
172819138431SHong Zhang   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->m,&B->M);CHKERRQ(ierr);
172919138431SHong Zhang   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->n,&B->N);CHKERRQ(ierr);
17308a124369SBarry Smith   ierr = PetscMapCreateMPI(B->comm,B->m,B->M,&B->rmap);CHKERRQ(ierr);
17318a124369SBarry Smith   ierr = PetscMapCreateMPI(B->comm,B->m,B->M,&B->cmap);CHKERRQ(ierr);
1732b5df2d14SHong Zhang 
1733b5df2d14SHong Zhang   b   = (Mat_MPISBAIJ*)B->data;
1734b5df2d14SHong Zhang   mbs = B->m/bs;
1735b5df2d14SHong Zhang   Mbs = B->M/bs;
1736b5df2d14SHong Zhang   if (mbs*bs != B->m) {
173719138431SHong Zhang     SETERRQ2(PETSC_ERR_ARG_SIZ,"No of local rows %d must be divisible by blocksize %d",B->m,bs);
1738b5df2d14SHong Zhang   }
1739b5df2d14SHong Zhang 
1740b5df2d14SHong Zhang   b->bs  = bs;
1741b5df2d14SHong Zhang   b->bs2 = bs*bs;
1742b5df2d14SHong Zhang   b->mbs = mbs;
1743b5df2d14SHong Zhang   b->nbs = mbs;
1744b5df2d14SHong Zhang   b->Mbs = Mbs;
1745b5df2d14SHong Zhang   b->Nbs = Mbs;
1746b5df2d14SHong Zhang 
1747b5df2d14SHong Zhang   ierr = MPI_Allgather(&b->mbs,1,MPI_INT,b->rowners+1,1,MPI_INT,B->comm);CHKERRQ(ierr);
1748b5df2d14SHong Zhang   b->rowners[0]    = 0;
1749b5df2d14SHong Zhang   for (i=2; i<=b->size; i++) {
1750b5df2d14SHong Zhang     b->rowners[i] += b->rowners[i-1];
1751b5df2d14SHong Zhang   }
1752b5df2d14SHong Zhang   b->rstart    = b->rowners[b->rank];
1753b5df2d14SHong Zhang   b->rend      = b->rowners[b->rank+1];
1754b5df2d14SHong Zhang   b->cstart    = b->rstart;
1755b5df2d14SHong Zhang   b->cend      = b->rend;
1756b5df2d14SHong Zhang   for (i=0; i<=b->size; i++) {
1757b5df2d14SHong Zhang     b->rowners_bs[i] = b->rowners[i]*bs;
1758b5df2d14SHong Zhang   }
1759b5df2d14SHong Zhang   b->rstart_bs = b-> rstart*bs;
1760b5df2d14SHong Zhang   b->rend_bs   = b->rend*bs;
1761b5df2d14SHong Zhang 
1762b5df2d14SHong Zhang   b->cstart_bs = b->cstart*bs;
1763b5df2d14SHong Zhang   b->cend_bs   = b->cend*bs;
1764b5df2d14SHong Zhang 
1765b5df2d14SHong Zhang 
1766b5df2d14SHong Zhang   ierr = MatCreateSeqSBAIJ(PETSC_COMM_SELF,bs,B->m,B->m,d_nz,d_nnz,&b->A);CHKERRQ(ierr);
1767b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->A);
1768b5df2d14SHong Zhang   ierr = MatCreateSeqBAIJ(PETSC_COMM_SELF,bs,B->m,B->M,o_nz,o_nnz,&b->B);CHKERRQ(ierr);
1769b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->B);
1770b5df2d14SHong Zhang 
1771b5df2d14SHong Zhang   /* build cache for off array entries formed */
1772b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);
1773b5df2d14SHong Zhang 
1774b5df2d14SHong Zhang   PetscFunctionReturn(0);
1775b5df2d14SHong Zhang }
1776b5df2d14SHong Zhang 
17774a2ae208SSatish Balay #undef __FUNCT__
17784a2ae208SSatish Balay #define __FUNCT__ "MatCreateMPISBAIJ"
1779a30f8f8cSSatish Balay /*@C
1780a30f8f8cSSatish Balay    MatCreateMPISBAIJ - Creates a sparse parallel matrix in symmetric block AIJ format
1781a30f8f8cSSatish Balay    (block compressed row).  For good matrix assembly performance
1782a30f8f8cSSatish Balay    the user should preallocate the matrix storage by setting the parameters
1783a30f8f8cSSatish Balay    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1784a30f8f8cSSatish Balay    performance can be increased by more than a factor of 50.
1785a30f8f8cSSatish Balay 
1786a30f8f8cSSatish Balay    Collective on MPI_Comm
1787a30f8f8cSSatish Balay 
1788a30f8f8cSSatish Balay    Input Parameters:
1789a30f8f8cSSatish Balay +  comm - MPI communicator
1790a30f8f8cSSatish Balay .  bs   - size of blockk
1791a30f8f8cSSatish Balay .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
1792a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1793a30f8f8cSSatish Balay            y vector for the matrix-vector product y = Ax.
1794a30f8f8cSSatish Balay .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
1795a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1796a30f8f8cSSatish Balay            x vector for the matrix-vector product y = Ax.
1797a30f8f8cSSatish Balay .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
1798a30f8f8cSSatish Balay .  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
1799a30f8f8cSSatish Balay .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1800a30f8f8cSSatish Balay            submatrix  (same for all local rows)
1801a30f8f8cSSatish Balay .  d_nnz - array containing the number of block nonzeros in the various block rows
1802a30f8f8cSSatish Balay            of the in diagonal portion of the local (possibly different for each block
1803a30f8f8cSSatish Balay            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1804a30f8f8cSSatish Balay .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1805a30f8f8cSSatish Balay            submatrix (same for all local rows).
1806a30f8f8cSSatish Balay -  o_nnz - array containing the number of nonzeros in the various block rows of the
1807a30f8f8cSSatish Balay            off-diagonal portion of the local submatrix (possibly different for
1808a30f8f8cSSatish Balay            each block row) or PETSC_NULL.
1809a30f8f8cSSatish Balay 
1810a30f8f8cSSatish Balay    Output Parameter:
1811a30f8f8cSSatish Balay .  A - the matrix
1812a30f8f8cSSatish Balay 
1813a30f8f8cSSatish Balay    Options Database Keys:
1814a30f8f8cSSatish Balay .   -mat_no_unroll - uses code that does not unroll the loops in the
1815a30f8f8cSSatish Balay                      block calculations (much slower)
1816a30f8f8cSSatish Balay .   -mat_block_size - size of the blocks to use
1817a30f8f8cSSatish Balay .   -mat_mpi - use the parallel matrix data structures even on one processor
1818a30f8f8cSSatish Balay                (defaults to using SeqBAIJ format on one processor)
1819a30f8f8cSSatish Balay 
1820a30f8f8cSSatish Balay    Notes:
1821a30f8f8cSSatish Balay    The user MUST specify either the local or global matrix dimensions
1822a30f8f8cSSatish Balay    (possibly both).
1823a30f8f8cSSatish Balay 
1824a30f8f8cSSatish Balay    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1825a30f8f8cSSatish Balay    than it must be used on all processors that share the object for that argument.
1826a30f8f8cSSatish Balay 
1827a30f8f8cSSatish Balay    Storage Information:
1828a30f8f8cSSatish Balay    For a square global matrix we define each processor's diagonal portion
1829a30f8f8cSSatish Balay    to be its local rows and the corresponding columns (a square submatrix);
1830a30f8f8cSSatish Balay    each processor's off-diagonal portion encompasses the remainder of the
1831a30f8f8cSSatish Balay    local matrix (a rectangular submatrix).
1832a30f8f8cSSatish Balay 
1833a30f8f8cSSatish Balay    The user can specify preallocated storage for the diagonal part of
1834a30f8f8cSSatish Balay    the local submatrix with either d_nz or d_nnz (not both).  Set
1835a30f8f8cSSatish Balay    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1836a30f8f8cSSatish Balay    memory allocation.  Likewise, specify preallocated storage for the
1837a30f8f8cSSatish Balay    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1838a30f8f8cSSatish Balay 
1839a30f8f8cSSatish Balay    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1840a30f8f8cSSatish Balay    the figure below we depict these three local rows and all columns (0-11).
1841a30f8f8cSSatish Balay 
1842a30f8f8cSSatish Balay .vb
1843a30f8f8cSSatish Balay            0 1 2 3 4 5 6 7 8 9 10 11
1844a30f8f8cSSatish Balay           -------------------
1845a30f8f8cSSatish Balay    row 3  |  o o o d d d o o o o o o
1846a30f8f8cSSatish Balay    row 4  |  o o o d d d o o o o o o
1847a30f8f8cSSatish Balay    row 5  |  o o o d d d o o o o o o
1848a30f8f8cSSatish Balay           -------------------
1849a30f8f8cSSatish Balay .ve
1850a30f8f8cSSatish Balay 
1851a30f8f8cSSatish Balay    Thus, any entries in the d locations are stored in the d (diagonal)
1852a30f8f8cSSatish Balay    submatrix, and any entries in the o locations are stored in the
1853a30f8f8cSSatish Balay    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1854a30f8f8cSSatish Balay    stored simply in the MATSEQBAIJ format for compressed row storage.
1855a30f8f8cSSatish Balay 
1856a30f8f8cSSatish Balay    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1857a30f8f8cSSatish Balay    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1858a30f8f8cSSatish Balay    In general, for PDE problems in which most nonzeros are near the diagonal,
1859a30f8f8cSSatish Balay    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1860a30f8f8cSSatish Balay    or you will get TERRIBLE performance; see the users' manual chapter on
1861a30f8f8cSSatish Balay    matrices.
1862a30f8f8cSSatish Balay 
1863a30f8f8cSSatish Balay    Level: intermediate
1864a30f8f8cSSatish Balay 
1865a30f8f8cSSatish Balay .keywords: matrix, block, aij, compressed row, sparse, parallel
1866a30f8f8cSSatish Balay 
1867a209d233SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1868a30f8f8cSSatish Balay @*/
1869a30f8f8cSSatish Balay 
1870a30f8f8cSSatish Balay int MatCreateMPISBAIJ(MPI_Comm comm,int bs,int m,int n,int M,int N,int d_nz,int *d_nnz,int o_nz,int *o_nnz,Mat *A)
1871a30f8f8cSSatish Balay {
1872273d9f13SBarry Smith   int ierr,size;
1873a30f8f8cSSatish Balay 
1874a30f8f8cSSatish Balay   PetscFunctionBegin;
1875b5df2d14SHong Zhang   ierr = MatCreate(comm,m,n,M,N,A);CHKERRQ(ierr);
1876273d9f13SBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1877273d9f13SBarry Smith   if (size > 1) {
1878b5df2d14SHong Zhang     ierr = MatSetType(*A,MATMPISBAIJ);CHKERRQ(ierr);
1879b5df2d14SHong Zhang     ierr = MatMPISBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
1880273d9f13SBarry Smith   } else {
1881273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQSBAIJ);CHKERRQ(ierr);
1882273d9f13SBarry Smith     ierr = MatSeqSBAIJSetPreallocation(*A,bs,d_nz,d_nnz);CHKERRQ(ierr);
1883273d9f13SBarry Smith   }
1884a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1885a30f8f8cSSatish Balay }
1886a30f8f8cSSatish Balay 
1887a30f8f8cSSatish Balay 
18884a2ae208SSatish Balay #undef __FUNCT__
18894a2ae208SSatish Balay #define __FUNCT__ "MatDuplicate_MPISBAIJ"
1890a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
1891a30f8f8cSSatish Balay {
1892a30f8f8cSSatish Balay   Mat          mat;
1893a30f8f8cSSatish Balay   Mat_MPISBAIJ *a,*oldmat = (Mat_MPISBAIJ*)matin->data;
1894a30f8f8cSSatish Balay   int          ierr,len=0;
1895a30f8f8cSSatish Balay 
1896a30f8f8cSSatish Balay   PetscFunctionBegin;
1897a30f8f8cSSatish Balay   *newmat       = 0;
1898b5df2d14SHong Zhang   ierr = MatCreate(matin->comm,matin->m,matin->n,matin->M,matin->N,&mat);CHKERRQ(ierr);
1899b5df2d14SHong Zhang   ierr = MatSetType(mat,MATMPISBAIJ);CHKERRQ(ierr);
1900273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
1901b5df2d14SHong Zhang   a = (Mat_MPISBAIJ*)mat->data;
1902a30f8f8cSSatish Balay   a->bs  = oldmat->bs;
1903a30f8f8cSSatish Balay   a->bs2 = oldmat->bs2;
1904a30f8f8cSSatish Balay   a->mbs = oldmat->mbs;
1905a30f8f8cSSatish Balay   a->nbs = oldmat->nbs;
1906a30f8f8cSSatish Balay   a->Mbs = oldmat->Mbs;
1907a30f8f8cSSatish Balay   a->Nbs = oldmat->Nbs;
1908a30f8f8cSSatish Balay 
1909a30f8f8cSSatish Balay   a->rstart       = oldmat->rstart;
1910a30f8f8cSSatish Balay   a->rend         = oldmat->rend;
1911a30f8f8cSSatish Balay   a->cstart       = oldmat->cstart;
1912a30f8f8cSSatish Balay   a->cend         = oldmat->cend;
1913a30f8f8cSSatish Balay   a->size         = oldmat->size;
1914a30f8f8cSSatish Balay   a->rank         = oldmat->rank;
1915a30f8f8cSSatish Balay   a->donotstash   = oldmat->donotstash;
1916a30f8f8cSSatish Balay   a->roworiented  = oldmat->roworiented;
1917a30f8f8cSSatish Balay   a->rowindices   = 0;
1918a30f8f8cSSatish Balay   a->rowvalues    = 0;
1919a30f8f8cSSatish Balay   a->getrowactive = PETSC_FALSE;
1920a30f8f8cSSatish Balay   a->barray       = 0;
1921a30f8f8cSSatish Balay   a->rstart_bs    = oldmat->rstart_bs;
1922a30f8f8cSSatish Balay   a->rend_bs      = oldmat->rend_bs;
1923a30f8f8cSSatish Balay   a->cstart_bs    = oldmat->cstart_bs;
1924a30f8f8cSSatish Balay   a->cend_bs      = oldmat->cend_bs;
1925a30f8f8cSSatish Balay 
1926a30f8f8cSSatish Balay   /* hash table stuff */
1927a30f8f8cSSatish Balay   a->ht           = 0;
1928a30f8f8cSSatish Balay   a->hd           = 0;
1929a30f8f8cSSatish Balay   a->ht_size      = 0;
1930a30f8f8cSSatish Balay   a->ht_flag      = oldmat->ht_flag;
1931a30f8f8cSSatish Balay   a->ht_fact      = oldmat->ht_fact;
1932a30f8f8cSSatish Balay   a->ht_total_ct  = 0;
1933a30f8f8cSSatish Balay   a->ht_insert_ct = 0;
1934a30f8f8cSSatish Balay 
193582502324SSatish Balay   ierr = PetscMalloc(3*(a->size+2)*sizeof(int),&a->rowners);CHKERRQ(ierr);
1936b0a32e0cSBarry Smith   PetscLogObjectMemory(mat,3*(a->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1937a30f8f8cSSatish Balay   a->cowners    = a->rowners + a->size + 2;
1938a30f8f8cSSatish Balay   a->rowners_bs = a->cowners + a->size + 2;
1939a30f8f8cSSatish Balay   ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(int));CHKERRQ(ierr);
1940a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
1941a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,oldmat->bs,&mat->bstash);CHKERRQ(ierr);
1942a30f8f8cSSatish Balay   if (oldmat->colmap) {
1943a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
1944a30f8f8cSSatish Balay     ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
1945a30f8f8cSSatish Balay #else
194682502324SSatish Balay     ierr = PetscMalloc((a->Nbs)*sizeof(int),&a->colmap);CHKERRQ(ierr);
1947b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,(a->Nbs)*sizeof(int));
1948a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(int));CHKERRQ(ierr);
1949a30f8f8cSSatish Balay #endif
1950a30f8f8cSSatish Balay   } else a->colmap = 0;
1951a30f8f8cSSatish Balay   if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
195282502324SSatish Balay     ierr = PetscMalloc(len*sizeof(int),&a->garray);CHKERRQ(ierr);
1953b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,len*sizeof(int));
1954a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));CHKERRQ(ierr);
1955a30f8f8cSSatish Balay   } else a->garray = 0;
1956a30f8f8cSSatish Balay 
1957a30f8f8cSSatish Balay   ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
1958b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->lvec);
1959a30f8f8cSSatish Balay   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
1960a30f8f8cSSatish Balay 
1961b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->Mvctx);
1962a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
1963b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->A);
1964a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
1965b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->B);
1966b0a32e0cSBarry Smith   ierr = PetscFListDuplicate(mat->qlist,&matin->qlist);CHKERRQ(ierr);
1967a30f8f8cSSatish Balay   *newmat = mat;
1968a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1969a30f8f8cSSatish Balay }
1970a30f8f8cSSatish Balay 
1971a30f8f8cSSatish Balay #include "petscsys.h"
1972a30f8f8cSSatish Balay 
1973273d9f13SBarry Smith EXTERN_C_BEGIN
19744a2ae208SSatish Balay #undef __FUNCT__
19754a2ae208SSatish Balay #define __FUNCT__ "MatLoad_MPISBAIJ"
1976b0a32e0cSBarry Smith int MatLoad_MPISBAIJ(PetscViewer viewer,MatType type,Mat *newmat)
1977a30f8f8cSSatish Balay {
1978a30f8f8cSSatish Balay   Mat          A;
1979a30f8f8cSSatish Balay   int          i,nz,ierr,j,rstart,rend,fd;
198087828ca2SBarry Smith   PetscScalar  *vals,*buf;
1981a30f8f8cSSatish Balay   MPI_Comm     comm = ((PetscObject)viewer)->comm;
1982a30f8f8cSSatish Balay   MPI_Status   status;
1983a30f8f8cSSatish Balay   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,*browners,maxnz,*cols;
1984a30f8f8cSSatish Balay   int          *locrowlens,*sndcounts = 0,*procsnz = 0,jj,*mycols,*ibuf;
1985a30f8f8cSSatish Balay   int          tag = ((PetscObject)viewer)->tag,bs=1,Mbs,mbs,extra_rows;
1986a30f8f8cSSatish Balay   int          *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
1987a30f8f8cSSatish Balay   int          dcount,kmax,k,nzcount,tmp;
1988a30f8f8cSSatish Balay 
1989a30f8f8cSSatish Balay   PetscFunctionBegin;
1990b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1991a30f8f8cSSatish Balay 
1992a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1993a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
1994a30f8f8cSSatish Balay   if (!rank) {
1995b0a32e0cSBarry Smith     ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
1996a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
1997552e946dSBarry Smith     if (header[0] != MAT_FILE_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
1998a30f8f8cSSatish Balay     if (header[3] < 0) {
199929bbc08cSBarry Smith       SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format, cannot load as MPISBAIJ");
2000a30f8f8cSSatish Balay     }
2001a30f8f8cSSatish Balay   }
2002a30f8f8cSSatish Balay 
2003a30f8f8cSSatish Balay   ierr = MPI_Bcast(header+1,3,MPI_INT,0,comm);CHKERRQ(ierr);
2004a30f8f8cSSatish Balay   M = header[1]; N = header[2];
2005a30f8f8cSSatish Balay 
200629bbc08cSBarry Smith   if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");
2007a30f8f8cSSatish Balay 
2008a30f8f8cSSatish Balay   /*
2009a30f8f8cSSatish Balay      This code adds extra rows to make sure the number of rows is
2010a30f8f8cSSatish Balay      divisible by the blocksize
2011a30f8f8cSSatish Balay   */
2012a30f8f8cSSatish Balay   Mbs        = M/bs;
2013a30f8f8cSSatish Balay   extra_rows = bs - M + bs*(Mbs);
2014a30f8f8cSSatish Balay   if (extra_rows == bs) extra_rows = 0;
2015a30f8f8cSSatish Balay   else                  Mbs++;
2016a30f8f8cSSatish Balay   if (extra_rows &&!rank) {
2017b0a32e0cSBarry Smith     PetscLogInfo(0,"MatLoad_MPISBAIJ:Padding loaded matrix to match blocksize\n");
2018a30f8f8cSSatish Balay   }
2019a30f8f8cSSatish Balay 
2020a30f8f8cSSatish Balay   /* determine ownership of all rows */
2021a30f8f8cSSatish Balay   mbs        = Mbs/size + ((Mbs % size) > rank);
2022a30f8f8cSSatish Balay   m          = mbs*bs;
2023b0a32e0cSBarry Smith   ierr       = PetscMalloc(2*(size+2)*sizeof(int),&rowners);CHKERRQ(ierr);
2024a30f8f8cSSatish Balay   browners   = rowners + size + 1;
2025a30f8f8cSSatish Balay   ierr       = MPI_Allgather(&mbs,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
2026a30f8f8cSSatish Balay   rowners[0] = 0;
2027a30f8f8cSSatish Balay   for (i=2; i<=size; i++) rowners[i] += rowners[i-1];
2028a30f8f8cSSatish Balay   for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
2029a30f8f8cSSatish Balay   rstart = rowners[rank];
2030a30f8f8cSSatish Balay   rend   = rowners[rank+1];
2031a30f8f8cSSatish Balay 
2032a30f8f8cSSatish Balay   /* distribute row lengths to all processors */
203382502324SSatish Balay   ierr = PetscMalloc((rend-rstart)*bs*sizeof(int),&locrowlens);CHKERRQ(ierr);
2034a30f8f8cSSatish Balay   if (!rank) {
2035b0a32e0cSBarry Smith     ierr = PetscMalloc((M+extra_rows)*sizeof(int),&rowlengths);CHKERRQ(ierr);
2036a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
2037a30f8f8cSSatish Balay     for (i=0; i<extra_rows; i++) rowlengths[M+i] = 1;
203882502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&sndcounts);CHKERRQ(ierr);
2039a30f8f8cSSatish Balay     for (i=0; i<size; i++) sndcounts[i] = browners[i+1] - browners[i];
2040a30f8f8cSSatish Balay     ierr = MPI_Scatterv(rowlengths,sndcounts,browners,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2041a30f8f8cSSatish Balay     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
2042a30f8f8cSSatish Balay   } else {
2043a30f8f8cSSatish Balay     ierr = MPI_Scatterv(0,0,0,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2044a30f8f8cSSatish Balay   }
2045a30f8f8cSSatish Balay 
20460222edb1SHong Zhang   if (!rank) {   /* procs[0] */
2047a30f8f8cSSatish Balay     /* calculate the number of nonzeros on each processor */
204882502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&procsnz);CHKERRQ(ierr);
2049a30f8f8cSSatish Balay     ierr = PetscMemzero(procsnz,size*sizeof(int));CHKERRQ(ierr);
2050a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2051a30f8f8cSSatish Balay       for (j=rowners[i]*bs; j< rowners[i+1]*bs; j++) {
2052a30f8f8cSSatish Balay         procsnz[i] += rowlengths[j];
2053a30f8f8cSSatish Balay       }
2054a30f8f8cSSatish Balay     }
2055a30f8f8cSSatish Balay     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
2056a30f8f8cSSatish Balay 
2057a30f8f8cSSatish Balay     /* determine max buffer needed and allocate it */
2058a30f8f8cSSatish Balay     maxnz = 0;
2059a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2060a30f8f8cSSatish Balay       maxnz = PetscMax(maxnz,procsnz[i]);
2061a30f8f8cSSatish Balay     }
206282502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(int),&cols);CHKERRQ(ierr);
2063a30f8f8cSSatish Balay 
2064a30f8f8cSSatish Balay     /* read in my part of the matrix column indices  */
2065a30f8f8cSSatish Balay     nz     = procsnz[0];
206682502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2067a30f8f8cSSatish Balay     mycols = ibuf;
2068a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2069a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
2070a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }
2071a30f8f8cSSatish Balay 
2072a30f8f8cSSatish Balay     /* read in every ones (except the last) and ship off */
2073a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2074a30f8f8cSSatish Balay       nz   = procsnz[i];
2075a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2076a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz,MPI_INT,i,tag,comm);CHKERRQ(ierr);
2077a30f8f8cSSatish Balay     }
2078a30f8f8cSSatish Balay     /* read in the stuff for the last proc */
2079a30f8f8cSSatish Balay     if (size != 1) {
2080a30f8f8cSSatish Balay       nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
2081a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2082a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
2083a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz+extra_rows,MPI_INT,size-1,tag,comm);CHKERRQ(ierr);
2084a30f8f8cSSatish Balay     }
2085a30f8f8cSSatish Balay     ierr = PetscFree(cols);CHKERRQ(ierr);
20860222edb1SHong Zhang   } else {  /* procs[i], i>0 */
2087a30f8f8cSSatish Balay     /* determine buffer space needed for message */
2088a30f8f8cSSatish Balay     nz = 0;
2089a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2090a30f8f8cSSatish Balay       nz += locrowlens[i];
2091a30f8f8cSSatish Balay     }
209282502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2093a30f8f8cSSatish Balay     mycols = ibuf;
2094a30f8f8cSSatish Balay     /* receive message of column indices*/
2095a30f8f8cSSatish Balay     ierr = MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);CHKERRQ(ierr);
2096a30f8f8cSSatish Balay     ierr = MPI_Get_count(&status,MPI_INT,&maxnz);CHKERRQ(ierr);
209729bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2098a30f8f8cSSatish Balay   }
2099a30f8f8cSSatish Balay 
2100a30f8f8cSSatish Balay   /* loop over local rows, determining number of off diagonal entries */
210182502324SSatish Balay   ierr     = PetscMalloc(2*(rend-rstart+1)*sizeof(int),&dlens);CHKERRQ(ierr);
2102a30f8f8cSSatish Balay   odlens   = dlens + (rend-rstart);
210382502324SSatish Balay   ierr     = PetscMalloc(3*Mbs*sizeof(int),&mask);CHKERRQ(ierr);
2104a30f8f8cSSatish Balay   ierr     = PetscMemzero(mask,3*Mbs*sizeof(int));CHKERRQ(ierr);
2105a30f8f8cSSatish Balay   masked1  = mask    + Mbs;
2106a30f8f8cSSatish Balay   masked2  = masked1 + Mbs;
2107a30f8f8cSSatish Balay   rowcount = 0; nzcount = 0;
2108a30f8f8cSSatish Balay   for (i=0; i<mbs; i++) {
2109a30f8f8cSSatish Balay     dcount  = 0;
2110a30f8f8cSSatish Balay     odcount = 0;
2111a30f8f8cSSatish Balay     for (j=0; j<bs; j++) {
2112a30f8f8cSSatish Balay       kmax = locrowlens[rowcount];
2113a30f8f8cSSatish Balay       for (k=0; k<kmax; k++) {
21140222edb1SHong Zhang         tmp = mycols[nzcount++]/bs; /* block col. index */
2115a30f8f8cSSatish Balay         if (!mask[tmp]) {
2116a30f8f8cSSatish Balay           mask[tmp] = 1;
21170222edb1SHong Zhang           if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp; /* entry in off-diag portion */
21180222edb1SHong Zhang           else masked1[dcount++] = tmp; /* entry in diag portion */
2119a30f8f8cSSatish Balay         }
2120a30f8f8cSSatish Balay       }
2121a30f8f8cSSatish Balay       rowcount++;
2122a30f8f8cSSatish Balay     }
2123a30f8f8cSSatish Balay 
21240222edb1SHong Zhang     dlens[i]  = dcount;  /* d_nzz[i] */
21250222edb1SHong Zhang     odlens[i] = odcount; /* o_nzz[i] */
2126a30f8f8cSSatish Balay 
2127a30f8f8cSSatish Balay     /* zero out the mask elements we set */
2128a30f8f8cSSatish Balay     for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
2129a30f8f8cSSatish Balay     for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
2130a30f8f8cSSatish Balay   }
2131a30f8f8cSSatish Balay 
2132a30f8f8cSSatish Balay   /* create our matrix */
21337e06b45fSHong Zhang   ierr = MatCreateMPISBAIJ(comm,bs,m,m,PETSC_DETERMINE,PETSC_DETERMINE,0,dlens,0,odlens,newmat);
2134bfe19f1aSHong Zhang   CHKERRQ(ierr);
2135a30f8f8cSSatish Balay   A = *newmat;
2136273d9f13SBarry Smith   ierr = MatSetOption(A,MAT_COLUMNS_SORTED);CHKERRQ(ierr);
2137a30f8f8cSSatish Balay 
2138a30f8f8cSSatish Balay   if (!rank) {
213987828ca2SBarry Smith     ierr = PetscMalloc(maxnz*sizeof(PetscScalar),&buf);CHKERRQ(ierr);
2140a30f8f8cSSatish Balay     /* read in my part of the matrix numerical values  */
2141a30f8f8cSSatish Balay     nz = procsnz[0];
2142a30f8f8cSSatish Balay     vals = buf;
2143a30f8f8cSSatish Balay     mycols = ibuf;
2144a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2145a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2146a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }
2147a30f8f8cSSatish Balay 
2148a30f8f8cSSatish Balay     /* insert into matrix */
2149a30f8f8cSSatish Balay     jj      = rstart*bs;
2150a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
21517e06b45fSHong Zhang       ierr = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2152a30f8f8cSSatish Balay       mycols += locrowlens[i];
2153a30f8f8cSSatish Balay       vals   += locrowlens[i];
2154a30f8f8cSSatish Balay       jj++;
2155a30f8f8cSSatish Balay     }
21567e06b45fSHong Zhang 
2157a30f8f8cSSatish Balay     /* read in other processors (except the last one) and ship out */
2158a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2159a30f8f8cSSatish Balay       nz   = procsnz[i];
2160a30f8f8cSSatish Balay       vals = buf;
2161a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2162a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
2163a30f8f8cSSatish Balay     }
2164a30f8f8cSSatish Balay     /* the last proc */
2165a30f8f8cSSatish Balay     if (size != 1){
2166a30f8f8cSSatish Balay       nz   = procsnz[i] - extra_rows;
2167a30f8f8cSSatish Balay       vals = buf;
2168a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2169a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
2170a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
2171a30f8f8cSSatish Balay     }
2172a30f8f8cSSatish Balay     ierr = PetscFree(procsnz);CHKERRQ(ierr);
21737e06b45fSHong Zhang 
2174a30f8f8cSSatish Balay   } else {
2175a30f8f8cSSatish Balay     /* receive numeric values */
217687828ca2SBarry Smith     ierr = PetscMalloc(nz*sizeof(PetscScalar),&buf);CHKERRQ(ierr);
2177a30f8f8cSSatish Balay 
2178a30f8f8cSSatish Balay     /* receive message of values*/
2179a30f8f8cSSatish Balay     vals   = buf;
2180a30f8f8cSSatish Balay     mycols = ibuf;
2181a30f8f8cSSatish Balay     ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
2182a30f8f8cSSatish Balay     ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
218329bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2184a30f8f8cSSatish Balay 
2185a30f8f8cSSatish Balay     /* insert into matrix */
2186a30f8f8cSSatish Balay     jj      = rstart*bs;
2187a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2188a30f8f8cSSatish Balay       ierr    = MatSetValues_MPISBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2189a30f8f8cSSatish Balay       mycols += locrowlens[i];
2190a30f8f8cSSatish Balay       vals   += locrowlens[i];
2191a30f8f8cSSatish Balay       jj++;
2192a30f8f8cSSatish Balay     }
2193a30f8f8cSSatish Balay   }
21947e06b45fSHong Zhang 
2195a30f8f8cSSatish Balay   ierr = PetscFree(locrowlens);CHKERRQ(ierr);
2196a30f8f8cSSatish Balay   ierr = PetscFree(buf);CHKERRQ(ierr);
2197a30f8f8cSSatish Balay   ierr = PetscFree(ibuf);CHKERRQ(ierr);
2198a30f8f8cSSatish Balay   ierr = PetscFree(rowners);CHKERRQ(ierr);
2199a30f8f8cSSatish Balay   ierr = PetscFree(dlens);CHKERRQ(ierr);
2200a30f8f8cSSatish Balay   ierr = PetscFree(mask);CHKERRQ(ierr);
2201a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2202a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2203a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2204a30f8f8cSSatish Balay }
2205273d9f13SBarry Smith EXTERN_C_END
2206a30f8f8cSSatish Balay 
22074a2ae208SSatish Balay #undef __FUNCT__
22084a2ae208SSatish Balay #define __FUNCT__ "MatMPISBAIJSetHashTableFactor"
2209a30f8f8cSSatish Balay /*@
2210a30f8f8cSSatish Balay    MatMPISBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.
2211a30f8f8cSSatish Balay 
2212a30f8f8cSSatish Balay    Input Parameters:
2213a30f8f8cSSatish Balay .  mat  - the matrix
2214a30f8f8cSSatish Balay .  fact - factor
2215a30f8f8cSSatish Balay 
2216a30f8f8cSSatish Balay    Collective on Mat
2217a30f8f8cSSatish Balay 
2218a30f8f8cSSatish Balay    Level: advanced
2219a30f8f8cSSatish Balay 
2220a30f8f8cSSatish Balay   Notes:
2221a30f8f8cSSatish Balay    This can also be set by the command line option: -mat_use_hash_table fact
2222a30f8f8cSSatish Balay 
2223a30f8f8cSSatish Balay .keywords: matrix, hashtable, factor, HT
2224a30f8f8cSSatish Balay 
2225a30f8f8cSSatish Balay .seealso: MatSetOption()
2226a30f8f8cSSatish Balay @*/
2227a30f8f8cSSatish Balay int MatMPISBAIJSetHashTableFactor(Mat mat,PetscReal fact)
2228a30f8f8cSSatish Balay {
2229a30f8f8cSSatish Balay   PetscFunctionBegin;
223029bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
223196e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
2232a30f8f8cSSatish Balay }
223324d5174aSHong Zhang 
22344a2ae208SSatish Balay #undef __FUNCT__
22354a2ae208SSatish Balay #define __FUNCT__ "MatGetRowMax_MPISBAIJ"
223624d5174aSHong Zhang int MatGetRowMax_MPISBAIJ(Mat A,Vec v)
223724d5174aSHong Zhang {
223824d5174aSHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
2239f4c0e9e4SHong Zhang   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(a->B)->data;
2240ca54ac64SHong Zhang   PetscReal    atmp;
224187828ca2SBarry Smith   PetscReal    *work,*svalues,*rvalues;
2242ca54ac64SHong Zhang   int          ierr,i,bs,mbs,*bi,*bj,brow,j,ncols,krow,kcol,col,row,Mbs,bcol;
2243154bba0bSHong Zhang   int          rank,size,*rowners_bs,dest,count,source;
224487828ca2SBarry Smith   PetscScalar  *va;
22458a1c53f2SBarry Smith   MatScalar    *ba;
2246f4c0e9e4SHong Zhang   MPI_Status   stat;
224724d5174aSHong Zhang 
224824d5174aSHong Zhang   PetscFunctionBegin;
2249d36791b2SHong Zhang   ierr = MatGetRowMax(a->A,v);CHKERRQ(ierr);
2250f4c0e9e4SHong Zhang   ierr = VecGetArray(v,&va);CHKERRQ(ierr);
2251f4c0e9e4SHong Zhang 
2252ac355199SBarry Smith   ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
2253ac355199SBarry Smith   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
2254f4c0e9e4SHong Zhang 
2255f4c0e9e4SHong Zhang   bs   = a->bs;
2256f4c0e9e4SHong Zhang   mbs  = a->mbs;
2257f4c0e9e4SHong Zhang   Mbs  = a->Mbs;
2258f4c0e9e4SHong Zhang   ba   = b->a;
2259f4c0e9e4SHong Zhang   bi   = b->i;
2260f4c0e9e4SHong Zhang   bj   = b->j;
2261ca54ac64SHong Zhang   /*
2262f4c0e9e4SHong Zhang   PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] M: %d, bs: %d, mbs: %d \n",rank,bs*Mbs,bs,mbs);
2263f4c0e9e4SHong Zhang   PetscSynchronizedFlush(PETSC_COMM_WORLD);
2264ca54ac64SHong Zhang   */
2265f4c0e9e4SHong Zhang 
2266f4c0e9e4SHong Zhang   /* find ownerships */
2267f4c0e9e4SHong Zhang   rowners_bs = a->rowners_bs;
2268f4c0e9e4SHong Zhang   /*
226904d41228SHong Zhang   if (!rank){
227004d41228SHong Zhang     for (i=0; i<size+1; i++) PetscPrintf(PETSC_COMM_SELF," rowners_bs[%d]: %d\n",i,rowners_bs[i]);
2271f4c0e9e4SHong Zhang   }
2272f4c0e9e4SHong Zhang   */
2273f4c0e9e4SHong Zhang 
2274f4c0e9e4SHong Zhang   /* each proc creates an array to be distributed */
227582502324SSatish Balay   ierr = PetscMalloc(bs*Mbs*sizeof(PetscReal),&work);CHKERRQ(ierr);
2276ca54ac64SHong Zhang   ierr = PetscMemzero(work,bs*Mbs*sizeof(PetscReal));CHKERRQ(ierr);
2277f4c0e9e4SHong Zhang 
2278f4c0e9e4SHong Zhang   /* row_max for B */
2279b8475685SHong Zhang   if (rank != size-1){
2280f4c0e9e4SHong Zhang     for (i=0; i<mbs; i++) {
2281f4c0e9e4SHong Zhang       ncols = bi[1] - bi[0]; bi++;
2282f4c0e9e4SHong Zhang       brow  = bs*i;
2283f4c0e9e4SHong Zhang       for (j=0; j<ncols; j++){
2284f4c0e9e4SHong Zhang         bcol = bs*(*bj);
2285f4c0e9e4SHong Zhang         for (kcol=0; kcol<bs; kcol++){
2286ca54ac64SHong Zhang           col = bcol + kcol;                 /* local col index */
228704d41228SHong Zhang           col += rowners_bs[rank+1];      /* global col index */
2288ca54ac64SHong Zhang           /* PetscPrintf(PETSC_COMM_SELF,"[%d], col: %d\n",rank,col); */
2289f4c0e9e4SHong Zhang           for (krow=0; krow<bs; krow++){
2290f4c0e9e4SHong Zhang             atmp = PetscAbsScalar(*ba); ba++;
2291ca54ac64SHong Zhang             row = brow + krow;    /* local row index */
2292f4c0e9e4SHong Zhang             /* printf("val[%d,%d]: %g\n",row,col,atmp); */
2293ca54ac64SHong Zhang             if (PetscRealPart(va[row]) < atmp) va[row] = atmp;
2294f4c0e9e4SHong Zhang             if (work[col] < atmp) work[col] = atmp;
2295f4c0e9e4SHong Zhang           }
2296f4c0e9e4SHong Zhang         }
2297f4c0e9e4SHong Zhang         bj++;
2298f4c0e9e4SHong Zhang       }
2299f4c0e9e4SHong Zhang     }
230004d41228SHong Zhang     /*
230104d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d], work: ",rank);
230204d41228SHong Zhang       for (i=0; i<bs*Mbs; i++) PetscPrintf(PETSC_COMM_SELF,"%g ",work[i]);
230304d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d]: \n");
230404d41228SHong Zhang       */
2305f4c0e9e4SHong Zhang 
2306f4c0e9e4SHong Zhang     /* send values to its owners */
2307f4c0e9e4SHong Zhang     for (dest=rank+1; dest<size; dest++){
2308f4c0e9e4SHong Zhang       svalues = work + rowners_bs[dest];
2309ca54ac64SHong Zhang       count   = rowners_bs[dest+1]-rowners_bs[dest];
2310d7d1e502SBarry Smith       ierr    = MPI_Send(svalues,count,MPIU_REAL,dest,rank,PETSC_COMM_WORLD);CHKERRQ(ierr);
2311ca54ac64SHong Zhang       /*
231204d41228SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] sends %d values to [%d]: %g, %g, %g, %g\n",rank,count,dest,svalues[0],svalues[1],svalues[2],svalues[3]);
2313f4c0e9e4SHong Zhang       PetscSynchronizedFlush(PETSC_COMM_WORLD);
2314ca54ac64SHong Zhang       */
2315ca54ac64SHong Zhang     }
2316f4c0e9e4SHong Zhang   }
2317f4c0e9e4SHong Zhang 
2318f4c0e9e4SHong Zhang   /* receive values */
2319ca54ac64SHong Zhang   if (rank){
2320f4c0e9e4SHong Zhang     rvalues = work;
2321ca54ac64SHong Zhang     count   = rowners_bs[rank+1]-rowners_bs[rank];
2322f4c0e9e4SHong Zhang     for (source=0; source<rank; source++){
2323d7d1e502SBarry Smith       ierr = MPI_Recv(rvalues,count,MPIU_REAL,MPI_ANY_SOURCE,MPI_ANY_TAG,PETSC_COMM_WORLD,&stat);CHKERRQ(ierr);
2324f4c0e9e4SHong Zhang       /* process values */
2325f4c0e9e4SHong Zhang       for (i=0; i<count; i++){
2326ca54ac64SHong Zhang         if (PetscRealPart(va[i]) < rvalues[i]) va[i] = rvalues[i];
2327f4c0e9e4SHong Zhang       }
2328ca54ac64SHong Zhang       /*
232904d41228SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] received %d values from [%d]: %g, %g, %g, %g \n",rank,count,stat.MPI_SOURCE,rvalues[0],rvalues[1],rvalues[2],rvalues[3]);
2330f4c0e9e4SHong Zhang       PetscSynchronizedFlush(PETSC_COMM_WORLD);
2331ca54ac64SHong Zhang       */
2332f4c0e9e4SHong Zhang     }
2333ca54ac64SHong Zhang   }
2334f4c0e9e4SHong Zhang 
2335f4c0e9e4SHong Zhang   ierr = VecRestoreArray(v,&va);CHKERRQ(ierr);
2336ac355199SBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
233724d5174aSHong Zhang   PetscFunctionReturn(0);
233824d5174aSHong Zhang }
23392798e883SHong Zhang 
23402798e883SHong Zhang #undef __FUNCT__
23412798e883SHong Zhang #define __FUNCT__ "MatRelax_MPISBAIJ"
2342c14dc6b6SHong Zhang int MatRelax_MPISBAIJ(Mat matin,Vec bb,PetscReal omega,MatSORType flag,PetscReal fshift,int its,int lits,Vec xx)
23432798e883SHong Zhang {
23442798e883SHong Zhang   Mat_MPISBAIJ   *mat = (Mat_MPISBAIJ*)matin->data;
23452798e883SHong Zhang   int            ierr;
2346d05c616dSSatish Balay   PetscScalar    mone=-1.0;
23472798e883SHong Zhang   Vec            lvec1,bb1;
23482798e883SHong Zhang 
23492798e883SHong Zhang   PetscFunctionBegin;
23502798e883SHong Zhang   if (mat->bs > 1)
23512798e883SHong Zhang     SETERRQ(PETSC_ERR_SUP,"SSOR for block size > 1 is not yet implemented");
23522798e883SHong Zhang 
2353c14dc6b6SHong Zhang   if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){
23542798e883SHong Zhang     if ( flag & SOR_ZERO_INITIAL_GUESS ) {
2355c14dc6b6SHong Zhang       ierr = (*mat->A->ops->relax)(mat->A,bb,omega,flag,fshift,lits,PETSC_NULL,xx);CHKERRQ(ierr);
23562798e883SHong Zhang       its--;
23572798e883SHong Zhang     }
23582798e883SHong Zhang 
23592798e883SHong Zhang     ierr = VecDuplicate(mat->lvec,&lvec1);CHKERRQ(ierr);
23602798e883SHong Zhang     ierr = VecDuplicate(bb,&bb1);CHKERRQ(ierr);
23612798e883SHong Zhang     while (its--){
23622798e883SHong Zhang       ierr = VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD,mat->Mvctx);CHKERRQ(ierr);
23632798e883SHong Zhang 
23642798e883SHong Zhang       /* lower diagonal part: bb1 = bb - B^T*xx */
23652798e883SHong Zhang       ierr = (*mat->B->ops->multtranspose)(mat->B,xx,lvec1);CHKERRQ(ierr);
23662798e883SHong Zhang       ierr = VecScale(&mone,lvec1);CHKERRQ(ierr);
23672798e883SHong Zhang 
23682798e883SHong Zhang       ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD,mat->Mvctx);CHKERRQ(ierr);
23692798e883SHong Zhang       ierr = VecCopy(bb,bb1);CHKERRQ(ierr);
23702798e883SHong Zhang       ierr = VecScatterBegin(lvec1,bb1,ADD_VALUES,SCATTER_REVERSE,mat->Mvctx);CHKERRQ(ierr);
23712798e883SHong Zhang 
23722798e883SHong Zhang       /* upper diagonal part: bb1 = bb1 - B*x */
23732798e883SHong Zhang       ierr = VecScale(&mone,mat->lvec);CHKERRQ(ierr);
23742798e883SHong Zhang       ierr = (*mat->B->ops->multadd)(mat->B,mat->lvec,bb1,bb1);CHKERRQ(ierr);
23752798e883SHong Zhang 
23762798e883SHong Zhang       ierr = VecScatterEnd(lvec1,bb1,ADD_VALUES,SCATTER_REVERSE,mat->Mvctx);CHKERRQ(ierr);
23772798e883SHong Zhang 
2378c14dc6b6SHong Zhang       /* diagonal sweep */
2379862afb7bSHong Zhang       ierr = (*mat->A->ops->relax)(mat->A,bb1,omega,SOR_SYMMETRIC_SWEEP,fshift,lits,PETSC_NULL,xx);CHKERRQ(ierr);
23802798e883SHong Zhang     }
23812798e883SHong Zhang     ierr = VecDestroy(lvec1);CHKERRQ(ierr);
23822798e883SHong Zhang     ierr = VecDestroy(bb1);CHKERRQ(ierr);
2383c14dc6b6SHong Zhang   } else {
2384c14dc6b6SHong Zhang     SETERRQ(PETSC_ERR_SUP,"MatSORType is not supported for SBAIJ matrix format");
2385c14dc6b6SHong Zhang   }
23862798e883SHong Zhang   PetscFunctionReturn(0);
23872798e883SHong Zhang }
23882798e883SHong Zhang 
2389