xref: /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c (revision d03495bd6a90c318a635ff2f45c05071e91761ec)
1*d03495bdSKris Buschelman /*$Id: mpisbaij.c,v 1.54 2001/06/21 23:38:52 buschelm Exp buschelm $*/
2a30f8f8cSSatish Balay 
3c8117e22SSatish Balay #include "src/mat/impls/baij/mpi/mpibaij.h"    /*I "petscmat.h" I*/
4a30f8f8cSSatish Balay #include "src/vec/vecimpl.h"
5a30f8f8cSSatish Balay #include "mpisbaij.h"
6a30f8f8cSSatish Balay #include "src/mat/impls/sbaij/seq/sbaij.h"
7a30f8f8cSSatish Balay 
8a30f8f8cSSatish Balay extern int MatSetUpMultiply_MPISBAIJ(Mat);
9a30f8f8cSSatish Balay extern int DisAssemble_MPISBAIJ(Mat);
10a30f8f8cSSatish Balay extern int MatIncreaseOverlap_MPISBAIJ(Mat,int,IS *,int);
11a30f8f8cSSatish Balay extern int MatGetSubMatrices_MPISBAIJ(Mat,int,IS *,IS *,MatReuse,Mat **);
12a30f8f8cSSatish Balay extern int MatGetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *);
13a30f8f8cSSatish Balay extern int MatSetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *,InsertMode);
14a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ(Mat,int,int*,int,int*,Scalar*,InsertMode);
15a30f8f8cSSatish Balay extern int MatGetRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
16a30f8f8cSSatish Balay extern int MatRestoreRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
17a30f8f8cSSatish Balay extern int MatPrintHelp_SeqSBAIJ(Mat);
18a30f8f8cSSatish Balay extern int MatZeroRows_SeqSBAIJ(Mat,IS,Scalar*);
1900319c27SSatish Balay extern int MatZeroRows_SeqBAIJ(Mat,IS,Scalar *);
20d0566740SHong Zhang extern int MatGetRowMax_MPISBAIJ(Mat,Vec);
21a30f8f8cSSatish Balay 
22a30f8f8cSSatish Balay /*  UGLY, ugly, ugly
23a30f8f8cSSatish Balay    When MatScalar == Scalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
24a30f8f8cSSatish Balay    not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
25a30f8f8cSSatish Balay    inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
26a30f8f8cSSatish Balay    converts the entries into single precision and then calls ..._MatScalar() to put them
27a30f8f8cSSatish Balay    into the single precision data structures.
28a30f8f8cSSatish Balay */
29a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
30a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
31a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
32a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
33a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
34a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
35a30f8f8cSSatish Balay #else
36a30f8f8cSSatish Balay #define MatSetValuesBlocked_SeqSBAIJ_MatScalar      MatSetValuesBlocked_SeqSBAIJ
37a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_MatScalar             MatSetValues_MPISBAIJ
38a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_MatScalar      MatSetValuesBlocked_MPISBAIJ
39a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_HT_MatScalar          MatSetValues_MPISBAIJ_HT
40a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_HT_MatScalar   MatSetValuesBlocked_MPISBAIJ_HT
41a30f8f8cSSatish Balay #endif
42a30f8f8cSSatish Balay 
43a30f8f8cSSatish Balay EXTERN_C_BEGIN
444a2ae208SSatish Balay #undef __FUNCT__
454a2ae208SSatish Balay #define __FUNCT__ "MatStoreValues_MPISBAIJ"
46a30f8f8cSSatish Balay int MatStoreValues_MPISBAIJ(Mat mat)
47a30f8f8cSSatish Balay {
48f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
49a30f8f8cSSatish Balay   int          ierr;
50a30f8f8cSSatish Balay 
51a30f8f8cSSatish Balay   PetscFunctionBegin;
52a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
53a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
54a30f8f8cSSatish Balay   PetscFunctionReturn(0);
55a30f8f8cSSatish Balay }
56a30f8f8cSSatish Balay EXTERN_C_END
57a30f8f8cSSatish Balay 
58a30f8f8cSSatish Balay EXTERN_C_BEGIN
594a2ae208SSatish Balay #undef __FUNCT__
604a2ae208SSatish Balay #define __FUNCT__ "MatRetrieveValues_MPISBAIJ"
61a30f8f8cSSatish Balay int MatRetrieveValues_MPISBAIJ(Mat mat)
62a30f8f8cSSatish Balay {
63f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
64a30f8f8cSSatish Balay   int          ierr;
65a30f8f8cSSatish Balay 
66a30f8f8cSSatish Balay   PetscFunctionBegin;
67a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
68a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
69a30f8f8cSSatish Balay   PetscFunctionReturn(0);
70a30f8f8cSSatish Balay }
71a30f8f8cSSatish Balay EXTERN_C_END
72a30f8f8cSSatish Balay 
73a30f8f8cSSatish Balay /*
74a30f8f8cSSatish Balay      Local utility routine that creates a mapping from the global column
75a30f8f8cSSatish Balay    number to the local number in the off-diagonal part of the local
76a30f8f8cSSatish Balay    storage of the matrix.  This is done in a non scable way since the
77a30f8f8cSSatish Balay    length of colmap equals the global matrix length.
78a30f8f8cSSatish Balay */
794a2ae208SSatish Balay #undef __FUNCT__
804a2ae208SSatish Balay #define __FUNCT__ "CreateColmap_MPISBAIJ_Private"
81a30f8f8cSSatish Balay static int CreateColmap_MPISBAIJ_Private(Mat mat)
82a30f8f8cSSatish Balay {
83a30f8f8cSSatish Balay   PetscFunctionBegin;
8429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
8596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
86a30f8f8cSSatish Balay }
87a30f8f8cSSatish Balay 
88a30f8f8cSSatish Balay #define CHUNKSIZE  10
89a30f8f8cSSatish Balay 
90a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv) \
91a30f8f8cSSatish Balay { \
92a30f8f8cSSatish Balay  \
93a30f8f8cSSatish Balay     brow = row/bs;  \
94a30f8f8cSSatish Balay     rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
95a30f8f8cSSatish Balay     rmax = aimax[brow]; nrow = ailen[brow]; \
96a30f8f8cSSatish Balay       bcol = col/bs; \
97a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
98a30f8f8cSSatish Balay       low = 0; high = nrow; \
99a30f8f8cSSatish Balay       while (high-low > 3) { \
100a30f8f8cSSatish Balay         t = (low+high)/2; \
101a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
102a30f8f8cSSatish Balay         else              low  = t; \
103a30f8f8cSSatish Balay       } \
104a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
105a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
106a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
107a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
108a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
109a30f8f8cSSatish Balay           else                    *bap  = value;  \
110a30f8f8cSSatish Balay           goto a_noinsert; \
111a30f8f8cSSatish Balay         } \
112a30f8f8cSSatish Balay       } \
113a30f8f8cSSatish Balay       if (a->nonew == 1) goto a_noinsert; \
11429bbc08cSBarry Smith       else if (a->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
115a30f8f8cSSatish Balay       if (nrow >= rmax) { \
116a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
117a30f8f8cSSatish Balay         int       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
118a30f8f8cSSatish Balay         MatScalar *new_a; \
119a30f8f8cSSatish Balay  \
12029bbc08cSBarry Smith         if (a->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
121a30f8f8cSSatish Balay  \
122a30f8f8cSSatish Balay         /* malloc new storage space */ \
123a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(int); \
12482502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
125a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
126a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
127a30f8f8cSSatish Balay  \
128a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
129a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
130a30f8f8cSSatish Balay         for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
131a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
132a30f8f8cSSatish Balay         len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
133a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
134a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
135a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(Scalar));CHKERRQ(ierr); \
136a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
137a30f8f8cSSatish Balay                     aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
138a30f8f8cSSatish Balay         /* free up old matrix storage */ \
139a30f8f8cSSatish Balay         ierr = PetscFree(a->a);CHKERRQ(ierr);  \
140a30f8f8cSSatish Balay         if (!a->singlemalloc) { \
141a30f8f8cSSatish Balay           ierr = PetscFree(a->i);CHKERRQ(ierr); \
142a30f8f8cSSatish Balay           ierr = PetscFree(a->j);CHKERRQ(ierr);\
143a30f8f8cSSatish Balay         } \
144a30f8f8cSSatish Balay         aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
145a30f8f8cSSatish Balay         a->singlemalloc = PETSC_TRUE; \
146a30f8f8cSSatish Balay  \
147a30f8f8cSSatish Balay         rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
148a30f8f8cSSatish Balay         rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
149b0a32e0cSBarry Smith         PetscLogObjectMemory(A,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
150a30f8f8cSSatish Balay         a->s_maxnz += bs2*CHUNKSIZE; \
151a30f8f8cSSatish Balay         a->reallocs++; \
152a30f8f8cSSatish Balay         a->s_nz++; \
153a30f8f8cSSatish Balay       } \
154a30f8f8cSSatish Balay       N = nrow++ - 1;  \
155a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
156a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
157a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
158a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
159a30f8f8cSSatish Balay       } \
160a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
161a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
162a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
163a30f8f8cSSatish Balay       a_noinsert:; \
164a30f8f8cSSatish Balay     ailen[brow] = nrow; \
165a30f8f8cSSatish Balay }
166a30f8f8cSSatish Balay #ifndef MatSetValues_SeqBAIJ_B_Private
167a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv) \
168a30f8f8cSSatish Balay { \
169a30f8f8cSSatish Balay     brow = row/bs;  \
170a30f8f8cSSatish Balay     rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
171a30f8f8cSSatish Balay     rmax = bimax[brow]; nrow = bilen[brow]; \
172a30f8f8cSSatish Balay       bcol = col/bs; \
173a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
174a30f8f8cSSatish Balay       low = 0; high = nrow; \
175a30f8f8cSSatish Balay       while (high-low > 3) { \
176a30f8f8cSSatish Balay         t = (low+high)/2; \
177a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
178a30f8f8cSSatish Balay         else              low  = t; \
179a30f8f8cSSatish Balay       } \
180a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
181a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
182a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
183a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
184a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
185a30f8f8cSSatish Balay           else                    *bap  = value;  \
186a30f8f8cSSatish Balay           goto b_noinsert; \
187a30f8f8cSSatish Balay         } \
188a30f8f8cSSatish Balay       } \
189a30f8f8cSSatish Balay       if (b->nonew == 1) goto b_noinsert; \
19029bbc08cSBarry Smith       else if (b->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
191a30f8f8cSSatish Balay       if (nrow >= rmax) { \
192a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
193a30f8f8cSSatish Balay         int       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
194a30f8f8cSSatish Balay         MatScalar *new_a; \
195a30f8f8cSSatish Balay  \
19629bbc08cSBarry Smith         if (b->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
197a30f8f8cSSatish Balay  \
198a30f8f8cSSatish Balay         /* malloc new storage space */ \
199a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(int); \
20082502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
201a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
202a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
203a30f8f8cSSatish Balay  \
204a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
205a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
206a30f8f8cSSatish Balay         for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
207a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
208a30f8f8cSSatish Balay         len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
209a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
210a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
211a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
212a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
213a30f8f8cSSatish Balay                     ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
214a30f8f8cSSatish Balay         /* free up old matrix storage */ \
215a30f8f8cSSatish Balay         ierr = PetscFree(b->a);CHKERRQ(ierr);  \
216a30f8f8cSSatish Balay         if (!b->singlemalloc) { \
217a30f8f8cSSatish Balay           ierr = PetscFree(b->i);CHKERRQ(ierr); \
218a30f8f8cSSatish Balay           ierr = PetscFree(b->j);CHKERRQ(ierr); \
219a30f8f8cSSatish Balay         } \
220a30f8f8cSSatish Balay         ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
221a30f8f8cSSatish Balay         b->singlemalloc = PETSC_TRUE; \
222a30f8f8cSSatish Balay  \
223a30f8f8cSSatish Balay         rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
224a30f8f8cSSatish Balay         rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
225b0a32e0cSBarry Smith         PetscLogObjectMemory(B,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
226a30f8f8cSSatish Balay         b->maxnz += bs2*CHUNKSIZE; \
227a30f8f8cSSatish Balay         b->reallocs++; \
228a30f8f8cSSatish Balay         b->nz++; \
229a30f8f8cSSatish Balay       } \
230a30f8f8cSSatish Balay       N = nrow++ - 1;  \
231a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
232a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
233a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
234a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
235a30f8f8cSSatish Balay       } \
236a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
237a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
238a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
239a30f8f8cSSatish Balay       b_noinsert:; \
240a30f8f8cSSatish Balay     bilen[brow] = nrow; \
241a30f8f8cSSatish Balay }
242a30f8f8cSSatish Balay #endif
243a30f8f8cSSatish Balay 
244a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
2454a2ae208SSatish Balay #undef __FUNCT__
2464a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ"
247a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
248a30f8f8cSSatish Balay {
249a30f8f8cSSatish Balay   Mat_MPISBAIJ *b = (Mat_MPISBAIJ*)mat->data;
250a30f8f8cSSatish Balay   int          ierr,i,N = m*n;
251a30f8f8cSSatish Balay   MatScalar    *vsingle;
252a30f8f8cSSatish Balay 
253a30f8f8cSSatish Balay   PetscFunctionBegin;
254a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
255a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
25682502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
257a30f8f8cSSatish Balay     b->setvalueslen  = N;
258a30f8f8cSSatish Balay   }
259a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
260a30f8f8cSSatish Balay 
261a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
262a30f8f8cSSatish Balay     vsingle[i] = v[i];
263a30f8f8cSSatish Balay   }
264a30f8f8cSSatish Balay   ierr = MatSetValues_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
265a30f8f8cSSatish Balay   PetscFunctionReturn(0);
266a30f8f8cSSatish Balay }
267a30f8f8cSSatish Balay 
2684a2ae208SSatish Balay #undef __FUNCT__
2694a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ"
270a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
271a30f8f8cSSatish Balay {
272a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
273a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
274a30f8f8cSSatish Balay   MatScalar   *vsingle;
275a30f8f8cSSatish Balay 
276a30f8f8cSSatish Balay   PetscFunctionBegin;
277a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
278a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
27982502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
280a30f8f8cSSatish Balay     b->setvalueslen  = N;
281a30f8f8cSSatish Balay   }
282a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
283a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
284a30f8f8cSSatish Balay     vsingle[i] = v[i];
285a30f8f8cSSatish Balay   }
286a30f8f8cSSatish Balay   ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
287a30f8f8cSSatish Balay   PetscFunctionReturn(0);
288a30f8f8cSSatish Balay }
289a30f8f8cSSatish Balay 
2904a2ae208SSatish Balay #undef __FUNCT__
2914a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ_HT"
292a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
293a30f8f8cSSatish Balay {
294a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
295a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
296a30f8f8cSSatish Balay   MatScalar   *vsingle;
297a30f8f8cSSatish Balay 
298a30f8f8cSSatish Balay   PetscFunctionBegin;
29929bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3004d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
301a30f8f8cSSatish Balay }
302a30f8f8cSSatish Balay 
3034a2ae208SSatish Balay #undef __FUNCT__
3044a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ_HT"
305a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
306a30f8f8cSSatish Balay {
307a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
308a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
309a30f8f8cSSatish Balay   MatScalar   *vsingle;
310a30f8f8cSSatish Balay 
311a30f8f8cSSatish Balay   PetscFunctionBegin;
31229bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3134d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
314a30f8f8cSSatish Balay }
315a30f8f8cSSatish Balay #endif
316a30f8f8cSSatish Balay 
317a30f8f8cSSatish Balay /* Only add/insert a(i,j) with i<=j (blocks).
318a30f8f8cSSatish Balay    Any a(i,j) with i>j input by user is ingored.
319a30f8f8cSSatish Balay */
3204a2ae208SSatish Balay #undef __FUNCT__
3214a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPIBAIJ"
322a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
323a30f8f8cSSatish Balay {
324a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
325a30f8f8cSSatish Balay   MatScalar    value;
326b5df2d14SHong Zhang   PetscTruth   roworiented = baij->roworiented;
327a30f8f8cSSatish Balay   int          ierr,i,j,row,col;
328b5df2d14SHong Zhang   int          rstart_orig=baij->rstart_bs;
329a30f8f8cSSatish Balay   int          rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
330a30f8f8cSSatish Balay   int          cend_orig=baij->cend_bs,bs=baij->bs;
331a30f8f8cSSatish Balay 
332a30f8f8cSSatish Balay   /* Some Variables required in the macro */
333a30f8f8cSSatish Balay   Mat          A = baij->A;
334a30f8f8cSSatish Balay   Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)(A)->data;
335a30f8f8cSSatish Balay   int          *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
336a30f8f8cSSatish Balay   MatScalar    *aa=a->a;
337a30f8f8cSSatish Balay 
338a30f8f8cSSatish Balay   Mat          B = baij->B;
339a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(B)->data;
340a30f8f8cSSatish Balay   int          *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
341a30f8f8cSSatish Balay   MatScalar    *ba=b->a;
342a30f8f8cSSatish Balay 
343a30f8f8cSSatish Balay   int          *rp,ii,nrow,_i,rmax,N,brow,bcol;
344a30f8f8cSSatish Balay   int          low,high,t,ridx,cidx,bs2=a->bs2;
345a30f8f8cSSatish Balay   MatScalar    *ap,*bap;
346a30f8f8cSSatish Balay 
347a30f8f8cSSatish Balay   /* for stash */
348f65c83cfSHong Zhang   int          n_loc, *in_loc=0;
349f65c83cfSHong Zhang   MatScalar    *v_loc=0;
350a30f8f8cSSatish Balay 
351a30f8f8cSSatish Balay   PetscFunctionBegin;
352a30f8f8cSSatish Balay 
353a30f8f8cSSatish Balay   if(!baij->donotstash){
35482502324SSatish Balay     ierr = PetscMalloc(n*sizeof(int),&in_loc);CHKERRQ(ierr);
35582502324SSatish Balay     ierr = PetscMalloc(n*sizeof(MatScalar),&v_loc);CHKERRQ(ierr);
356a30f8f8cSSatish Balay   }
357a30f8f8cSSatish Balay 
358a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
359a30f8f8cSSatish Balay     if (im[i] < 0) continue;
360a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
361b5df2d14SHong Zhang     if (im[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
362a30f8f8cSSatish Balay #endif
363a30f8f8cSSatish Balay     if (im[i] >= rstart_orig && im[i] < rend_orig) { /* this processor entry */
364a30f8f8cSSatish Balay       row = im[i] - rstart_orig;              /* local row index */
365a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
366f65c83cfSHong Zhang         if (im[i]/bs > in[j]/bs) continue;    /* ignore lower triangular blocks */
367a30f8f8cSSatish Balay         if (in[j] >= cstart_orig && in[j] < cend_orig){  /* diag entry (A) */
368a30f8f8cSSatish Balay           col = in[j] - cstart_orig;          /* local col index */
369a30f8f8cSSatish Balay           brow = row/bs; bcol = col/bs;
370a30f8f8cSSatish Balay           if (brow > bcol) continue;  /* ignore lower triangular blocks of A */
371a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
372a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv);
373a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
374a30f8f8cSSatish Balay         } else if (in[j] < 0) continue;
375a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
376b5df2d14SHong Zhang         else if (in[j] >= mat->N) {SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Col too large");}
377a30f8f8cSSatish Balay #endif
378a30f8f8cSSatish Balay         else {  /* off-diag entry (B) */
379a30f8f8cSSatish Balay           if (mat->was_assembled) {
380a30f8f8cSSatish Balay             if (!baij->colmap) {
381a30f8f8cSSatish Balay               ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
382a30f8f8cSSatish Balay             }
383a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
384a30f8f8cSSatish Balay             ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
385a30f8f8cSSatish Balay             col  = col - 1 + in[j]%bs;
386a30f8f8cSSatish Balay #else
387a30f8f8cSSatish Balay             col = baij->colmap[in[j]/bs] - 1 + in[j]%bs;
388a30f8f8cSSatish Balay #endif
389a30f8f8cSSatish Balay             if (col < 0 && !((Mat_SeqSBAIJ*)(baij->A->data))->nonew) {
390a30f8f8cSSatish Balay               ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
391a30f8f8cSSatish Balay               col =  in[j];
392a30f8f8cSSatish Balay               /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
393a30f8f8cSSatish Balay               B = baij->B;
394a30f8f8cSSatish Balay               b = (Mat_SeqBAIJ*)(B)->data;
395a30f8f8cSSatish Balay               bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
396a30f8f8cSSatish Balay               ba=b->a;
397a30f8f8cSSatish Balay             }
398a30f8f8cSSatish Balay           } else col = in[j];
399a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
400a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv);
401a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
402a30f8f8cSSatish Balay         }
403a30f8f8cSSatish Balay       }
404a30f8f8cSSatish Balay     } else {  /* off processor entry */
405a30f8f8cSSatish Balay       if (!baij->donotstash) {
406a30f8f8cSSatish Balay         n_loc = 0;
407a30f8f8cSSatish Balay         for (j=0; j<n; j++){
408f65c83cfSHong Zhang           if (im[i]/bs > in[j]/bs) continue; /* ignore lower triangular blocks */
409a30f8f8cSSatish Balay           in_loc[n_loc] = in[j];
410a30f8f8cSSatish Balay           if (roworiented) {
411a30f8f8cSSatish Balay             v_loc[n_loc] = v[i*n+j];
412a30f8f8cSSatish Balay           } else {
413a30f8f8cSSatish Balay             v_loc[n_loc] = v[j*m+i];
414a30f8f8cSSatish Balay           }
415a30f8f8cSSatish Balay           n_loc++;
416a30f8f8cSSatish Balay         }
417a30f8f8cSSatish Balay         ierr = MatStashValuesRow_Private(&mat->stash,im[i],n_loc,in_loc,v_loc);CHKERRQ(ierr);
418a30f8f8cSSatish Balay       }
419a30f8f8cSSatish Balay     }
420a30f8f8cSSatish Balay   }
421a30f8f8cSSatish Balay 
422a30f8f8cSSatish Balay   if(!baij->donotstash){
423a30f8f8cSSatish Balay     ierr = PetscFree(in_loc);CHKERRQ(ierr);
424a30f8f8cSSatish Balay     ierr = PetscFree(v_loc);CHKERRQ(ierr);
425a30f8f8cSSatish Balay   }
426a30f8f8cSSatish Balay   PetscFunctionReturn(0);
427a30f8f8cSSatish Balay }
428a30f8f8cSSatish Balay 
4294a2ae208SSatish Balay #undef __FUNCT__
4304a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ"
431a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
432a30f8f8cSSatish Balay {
433a30f8f8cSSatish Balay   PetscFunctionBegin;
43429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
43596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
436a30f8f8cSSatish Balay }
437a30f8f8cSSatish Balay 
438a30f8f8cSSatish Balay #define HASH_KEY 0.6180339887
439a30f8f8cSSatish Balay #define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(int)((size)*(tmp-(int)tmp)))
440a30f8f8cSSatish Balay /* #define HASH(size,key) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
441a30f8f8cSSatish Balay /* #define HASH(size,key,tmp) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
4424a2ae208SSatish Balay #undef __FUNCT__
4434a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ_HT_MatScalar"
444a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
445a30f8f8cSSatish Balay {
446a30f8f8cSSatish Balay   PetscFunctionBegin;
44729bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
44896e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
449a30f8f8cSSatish Balay }
450a30f8f8cSSatish Balay 
4514a2ae208SSatish Balay #undef __FUNCT__
4524a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ_HT_MatScalar"
453a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
454a30f8f8cSSatish Balay {
455a30f8f8cSSatish Balay   PetscFunctionBegin;
45629bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
45796e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
458a30f8f8cSSatish Balay }
459a30f8f8cSSatish Balay 
4604a2ae208SSatish Balay #undef __FUNCT__
4614a2ae208SSatish Balay #define __FUNCT__ "MatGetValues_MPISBAIJ"
462a30f8f8cSSatish Balay int MatGetValues_MPISBAIJ(Mat mat,int m,int *idxm,int n,int *idxn,Scalar *v)
463a30f8f8cSSatish Balay {
464f3566a2aSHong Zhang   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
465a30f8f8cSSatish Balay   int          bs=baij->bs,ierr,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
466a30f8f8cSSatish Balay   int          bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;
467a30f8f8cSSatish Balay 
468a30f8f8cSSatish Balay   PetscFunctionBegin;
469a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
47029bbc08cSBarry Smith     if (idxm[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
471b5df2d14SHong Zhang     if (idxm[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
472a30f8f8cSSatish Balay     if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
473a30f8f8cSSatish Balay       row = idxm[i] - bsrstart;
474a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
47529bbc08cSBarry Smith         if (idxn[j] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative column");
476b5df2d14SHong Zhang         if (idxn[j] >= mat->N) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
477a30f8f8cSSatish Balay         if (idxn[j] >= bscstart && idxn[j] < bscend){
478a30f8f8cSSatish Balay           col = idxn[j] - bscstart;
479c8407628SSatish Balay           ierr = MatGetValues_SeqSBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
480a30f8f8cSSatish Balay         } else {
481a30f8f8cSSatish Balay           if (!baij->colmap) {
482a30f8f8cSSatish Balay             ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
483a30f8f8cSSatish Balay           }
484a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
485a30f8f8cSSatish Balay           ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
486a30f8f8cSSatish Balay           data --;
487a30f8f8cSSatish Balay #else
488a30f8f8cSSatish Balay           data = baij->colmap[idxn[j]/bs]-1;
489a30f8f8cSSatish Balay #endif
490a30f8f8cSSatish Balay           if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
491a30f8f8cSSatish Balay           else {
492a30f8f8cSSatish Balay             col  = data + idxn[j]%bs;
493c8407628SSatish Balay             ierr = MatGetValues_SeqSBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
494a30f8f8cSSatish Balay           }
495a30f8f8cSSatish Balay         }
496a30f8f8cSSatish Balay       }
497a30f8f8cSSatish Balay     } else {
49829bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
499a30f8f8cSSatish Balay     }
500a30f8f8cSSatish Balay   }
501a30f8f8cSSatish Balay  PetscFunctionReturn(0);
502a30f8f8cSSatish Balay }
503a30f8f8cSSatish Balay 
5044a2ae208SSatish Balay #undef __FUNCT__
5054a2ae208SSatish Balay #define __FUNCT__ "MatNorm_MPISBAIJ"
506a30f8f8cSSatish Balay int MatNorm_MPISBAIJ(Mat mat,NormType type,PetscReal *norm)
507a30f8f8cSSatish Balay {
508a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
509bc0ba53dSHong Zhang   /* Mat_SeqSBAIJ *amat = (Mat_SeqSBAIJ*)baij->A->data; */
510bc0ba53dSHong Zhang   /* Mat_SeqBAIJ  *bmat = (Mat_SeqBAIJ*)baij->B->data; */
511a30f8f8cSSatish Balay   int        ierr;
512a30f8f8cSSatish Balay   PetscReal  sum[2],*lnorm2;
513a30f8f8cSSatish Balay 
514a30f8f8cSSatish Balay   PetscFunctionBegin;
515a30f8f8cSSatish Balay   if (baij->size == 1) {
516a30f8f8cSSatish Balay     ierr =  MatNorm(baij->A,type,norm);CHKERRQ(ierr);
517a30f8f8cSSatish Balay   } else {
518a30f8f8cSSatish Balay     if (type == NORM_FROBENIUS) {
51982502324SSatish Balay       ierr = PetscMalloc(2*sizeof(double),&lnorm2);CHKERRQ(ierr);
520a30f8f8cSSatish Balay       ierr =  MatNorm(baij->A,type,lnorm2);CHKERRQ(ierr);
521a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2++;            /* squar power of norm(A) */
522a30f8f8cSSatish Balay       ierr =  MatNorm(baij->B,type,lnorm2);CHKERRQ(ierr);
523a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2--;             /* squar power of norm(B) */
524a30f8f8cSSatish Balay       /*
525a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
526a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], lnorm2=%g, %g\n",rank,lnorm2[0],lnorm2[1]);
527a30f8f8cSSatish Balay       */
528a30f8f8cSSatish Balay       ierr = MPI_Allreduce(lnorm2,&sum,2,MPI_DOUBLE,MPI_SUM,mat->comm);CHKERRQ(ierr);
529a30f8f8cSSatish Balay       /*
530a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], sum=%g, %g\n",rank,sum[0],sum[1]);
531a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD); */
532a30f8f8cSSatish Balay 
533a30f8f8cSSatish Balay       *norm = sqrt(sum[0] + 2*sum[1]);
534a30f8f8cSSatish Balay       ierr = PetscFree(lnorm2);CHKERRQ(ierr);
535a30f8f8cSSatish Balay     } else {
53629bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
537a30f8f8cSSatish Balay     }
538a30f8f8cSSatish Balay   }
539a30f8f8cSSatish Balay   PetscFunctionReturn(0);
540a30f8f8cSSatish Balay }
541a30f8f8cSSatish Balay 
542a30f8f8cSSatish Balay /*
543a30f8f8cSSatish Balay   Creates the hash table, and sets the table
544a30f8f8cSSatish Balay   This table is created only once.
545a30f8f8cSSatish Balay   If new entried need to be added to the matrix
546a30f8f8cSSatish Balay   then the hash table has to be destroyed and
547a30f8f8cSSatish Balay   recreated.
548a30f8f8cSSatish Balay */
5494a2ae208SSatish Balay #undef __FUNCT__
5504a2ae208SSatish Balay #define __FUNCT__ "MatCreateHashTable_MPISBAIJ_Private"
551a30f8f8cSSatish Balay int MatCreateHashTable_MPISBAIJ_Private(Mat mat,PetscReal factor)
552a30f8f8cSSatish Balay {
553a30f8f8cSSatish Balay   PetscFunctionBegin;
55429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
55596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
556a30f8f8cSSatish Balay }
557a30f8f8cSSatish Balay 
5584a2ae208SSatish Balay #undef __FUNCT__
5594a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyBegin_MPISBAIJ"
560a30f8f8cSSatish Balay int MatAssemblyBegin_MPISBAIJ(Mat mat,MatAssemblyType mode)
561a30f8f8cSSatish Balay {
562a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
563a30f8f8cSSatish Balay   int         ierr,nstash,reallocs;
564a30f8f8cSSatish Balay   InsertMode  addv;
565a30f8f8cSSatish Balay 
566a30f8f8cSSatish Balay   PetscFunctionBegin;
567a30f8f8cSSatish Balay   if (baij->donotstash) {
568a30f8f8cSSatish Balay     PetscFunctionReturn(0);
569a30f8f8cSSatish Balay   }
570a30f8f8cSSatish Balay 
571a30f8f8cSSatish Balay   /* make sure all processors are either in INSERTMODE or ADDMODE */
572a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
573a30f8f8cSSatish Balay   if (addv == (ADD_VALUES|INSERT_VALUES)) {
57429bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
575a30f8f8cSSatish Balay   }
576a30f8f8cSSatish Balay   mat->insertmode = addv; /* in case this processor had no cache */
577a30f8f8cSSatish Balay 
578a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
579a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
580a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
581b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Stash has %d entries,uses %d mallocs.\n",nstash,reallocs);
582a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
583b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Block-Stash has %d entries, uses %d mallocs.\n",nstash,reallocs);
584a30f8f8cSSatish Balay   PetscFunctionReturn(0);
585a30f8f8cSSatish Balay }
586a30f8f8cSSatish Balay 
5874a2ae208SSatish Balay #undef __FUNCT__
5884a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyEnd_MPISBAIJ"
589a30f8f8cSSatish Balay int MatAssemblyEnd_MPISBAIJ(Mat mat,MatAssemblyType mode)
590a30f8f8cSSatish Balay {
591a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij=(Mat_MPISBAIJ*)mat->data;
592a30f8f8cSSatish Balay   Mat_SeqSBAIJ  *a=(Mat_SeqSBAIJ*)baij->A->data;
593a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b=(Mat_SeqBAIJ*)baij->B->data;
594a30f8f8cSSatish Balay   int         i,j,rstart,ncols,n,ierr,flg,bs2=baij->bs2;
595a30f8f8cSSatish Balay   int         *row,*col,other_disassembled;
596a30f8f8cSSatish Balay   PetscTruth  r1,r2,r3;
597a30f8f8cSSatish Balay   MatScalar   *val;
598a30f8f8cSSatish Balay   InsertMode  addv = mat->insertmode;
5996f651dedSSatish Balay   /* int         rank;*/
600a30f8f8cSSatish Balay 
601a30f8f8cSSatish Balay   PetscFunctionBegin;
602a30f8f8cSSatish Balay   /* remove 2 line below later */
6036f651dedSSatish Balay   /*ierr = MPI_Comm_rank(PETSC_COMM_WORLD, &rank);CHKERRQ(ierr); */
604a30f8f8cSSatish Balay 
605a30f8f8cSSatish Balay   if (!baij->donotstash) {
606a30f8f8cSSatish Balay     while (1) {
607a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
608a30f8f8cSSatish Balay       /*
609a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d]: in AssemblyEnd, stash, flg=%d\n",rank,flg);
610a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD);
611a30f8f8cSSatish Balay       */
612a30f8f8cSSatish Balay       if (!flg) break;
613a30f8f8cSSatish Balay 
614a30f8f8cSSatish Balay       for (i=0; i<n;) {
615a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
616a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
617a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
618a30f8f8cSSatish Balay         else       ncols = n-i;
619a30f8f8cSSatish Balay         /* Now assemble all these values with a single function call */
620a30f8f8cSSatish Balay         ierr = MatSetValues_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
621a30f8f8cSSatish Balay         i = j;
622a30f8f8cSSatish Balay       }
623a30f8f8cSSatish Balay     }
624a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
625a30f8f8cSSatish Balay     /* Now process the block-stash. Since the values are stashed column-oriented,
626a30f8f8cSSatish Balay        set the roworiented flag to column oriented, and after MatSetValues()
627a30f8f8cSSatish Balay        restore the original flags */
628a30f8f8cSSatish Balay     r1 = baij->roworiented;
629a30f8f8cSSatish Balay     r2 = a->roworiented;
630a30f8f8cSSatish Balay     r3 = b->roworiented;
631a30f8f8cSSatish Balay     baij->roworiented = PETSC_FALSE;
632a30f8f8cSSatish Balay     a->roworiented    = PETSC_FALSE;
633a30f8f8cSSatish Balay     b->roworiented    = PETSC_FALSE;
634a30f8f8cSSatish Balay     while (1) {
635a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
636a30f8f8cSSatish Balay       if (!flg) break;
637a30f8f8cSSatish Balay 
638a30f8f8cSSatish Balay       for (i=0; i<n;) {
639a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
640a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
641a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
642a30f8f8cSSatish Balay         else       ncols = n-i;
643a30f8f8cSSatish Balay         ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
644a30f8f8cSSatish Balay         i = j;
645a30f8f8cSSatish Balay       }
646a30f8f8cSSatish Balay     }
647a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
648a30f8f8cSSatish Balay     baij->roworiented = r1;
649a30f8f8cSSatish Balay     a->roworiented    = r2;
650a30f8f8cSSatish Balay     b->roworiented    = r3;
651a30f8f8cSSatish Balay   }
652a30f8f8cSSatish Balay 
653a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
654a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);
655a30f8f8cSSatish Balay 
656a30f8f8cSSatish Balay   /* determine if any processor has disassembled, if so we must
657a30f8f8cSSatish Balay      also disassemble ourselfs, in order that we may reassemble. */
658a30f8f8cSSatish Balay   /*
659a30f8f8cSSatish Balay      if nonzero structure of submatrix B cannot change then we know that
660a30f8f8cSSatish Balay      no processor disassembled thus we can skip this stuff
661a30f8f8cSSatish Balay   */
662a30f8f8cSSatish Balay   if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
663a30f8f8cSSatish Balay     ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
664a30f8f8cSSatish Balay     if (mat->was_assembled && !other_disassembled) {
665c8407628SSatish Balay       ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
666a30f8f8cSSatish Balay     }
667a30f8f8cSSatish Balay   }
668a30f8f8cSSatish Balay 
669a30f8f8cSSatish Balay   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
670a30f8f8cSSatish Balay     ierr = MatSetUpMultiply_MPISBAIJ(mat);CHKERRQ(ierr);
671a30f8f8cSSatish Balay   }
672a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
673a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);
674a30f8f8cSSatish Balay 
675a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
676a30f8f8cSSatish Balay   if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
677b0a32e0cSBarry Smith     PetscLogInfo(0,"MatAssemblyEnd_MPISBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((double)baij->ht_total_ct)/baij->ht_insert_ct);
678a30f8f8cSSatish Balay     baij->ht_total_ct  = 0;
679a30f8f8cSSatish Balay     baij->ht_insert_ct = 0;
680a30f8f8cSSatish Balay   }
681a30f8f8cSSatish Balay #endif
682a30f8f8cSSatish Balay   if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
683c8407628SSatish Balay     ierr = MatCreateHashTable_MPISBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
684a30f8f8cSSatish Balay     mat->ops->setvalues        = MatSetValues_MPISBAIJ_HT;
685a30f8f8cSSatish Balay     mat->ops->setvaluesblocked = MatSetValuesBlocked_MPISBAIJ_HT;
686a30f8f8cSSatish Balay   }
687a30f8f8cSSatish Balay 
688a30f8f8cSSatish Balay   if (baij->rowvalues) {
689a30f8f8cSSatish Balay     ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
690a30f8f8cSSatish Balay     baij->rowvalues = 0;
691a30f8f8cSSatish Balay   }
692a30f8f8cSSatish Balay   PetscFunctionReturn(0);
693a30f8f8cSSatish Balay }
694a30f8f8cSSatish Balay 
6954a2ae208SSatish Balay #undef __FUNCT__
6964a2ae208SSatish Balay #define __FUNCT__ "MatView_MPISBAIJ_ASCIIorDraworSocket"
697b0a32e0cSBarry Smith static int MatView_MPISBAIJ_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
698a30f8f8cSSatish Balay {
699a30f8f8cSSatish Balay   Mat_MPISBAIJ      *baij = (Mat_MPISBAIJ*)mat->data;
700fb9695e5SSatish Balay   int               ierr,bs = baij->bs,size = baij->size,rank = baij->rank;
701a30f8f8cSSatish Balay   PetscTruth        isascii,isdraw;
702b0a32e0cSBarry Smith   PetscViewer       sviewer;
703f3ef73ceSBarry Smith   PetscViewerFormat format;
704a30f8f8cSSatish Balay 
705a30f8f8cSSatish Balay   PetscFunctionBegin;
706b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
707fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
708a30f8f8cSSatish Balay   if (isascii) {
709b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
710fb9695e5SSatish Balay     if (format == PETSC_VIEWER_ASCII_INFO_LONG) {
711a30f8f8cSSatish Balay       MatInfo info;
712a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
713a30f8f8cSSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
714b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %d nz %d nz alloced %d bs %d mem %d\n",
715b5df2d14SHong Zhang               rank,mat->m,(int)info.nz_used*bs,(int)info.nz_allocated*bs,
716a30f8f8cSSatish Balay               baij->bs,(int)info.memory);CHKERRQ(ierr);
717a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
718b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
719a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
720b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
721b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
722a30f8f8cSSatish Balay       ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
723a30f8f8cSSatish Balay       PetscFunctionReturn(0);
724fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
725b0a32e0cSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  block size is %d\n",bs);CHKERRQ(ierr);
726a30f8f8cSSatish Balay       PetscFunctionReturn(0);
727a30f8f8cSSatish Balay     }
728a30f8f8cSSatish Balay   }
729a30f8f8cSSatish Balay 
730a30f8f8cSSatish Balay   if (isdraw) {
731b0a32e0cSBarry Smith     PetscDraw       draw;
732a30f8f8cSSatish Balay     PetscTruth isnull;
733b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
734b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
735a30f8f8cSSatish Balay   }
736a30f8f8cSSatish Balay 
737a30f8f8cSSatish Balay   if (size == 1) {
738e36acaf3SBarry Smith     ierr = PetscObjectSetName((PetscObject)baij->A,mat->name);CHKERRQ(ierr);
739a30f8f8cSSatish Balay     ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
740a30f8f8cSSatish Balay   } else {
741a30f8f8cSSatish Balay     /* assemble the entire matrix onto first processor. */
742a30f8f8cSSatish Balay     Mat         A;
74365d70643SHong Zhang     Mat_SeqSBAIJ *Aloc;
74465d70643SHong Zhang     Mat_SeqBAIJ *Bloc;
745b5df2d14SHong Zhang     int         M = mat->M,N = mat->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
746a30f8f8cSSatish Balay     MatScalar   *a;
747a30f8f8cSSatish Balay 
748a30f8f8cSSatish Balay     if (!rank) {
749bc0ba53dSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,M,N,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
750a30f8f8cSSatish Balay     } else {
751f65c83cfSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,0,0,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
752a30f8f8cSSatish Balay     }
753b0a32e0cSBarry Smith     PetscLogObjectParent(mat,A);
754a30f8f8cSSatish Balay 
755a30f8f8cSSatish Balay     /* copy over the A part */
75665d70643SHong Zhang     Aloc  = (Mat_SeqSBAIJ*)baij->A->data;
757a30f8f8cSSatish Balay     ai    = Aloc->i; aj = Aloc->j; a = Aloc->a;
75882502324SSatish Balay     ierr  = PetscMalloc(bs*sizeof(int),&rvals);CHKERRQ(ierr);
759a30f8f8cSSatish Balay 
760a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
761a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
762a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
763a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
764a30f8f8cSSatish Balay         col = (baij->cstart+aj[j])*bs;
765a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
766a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
767a30f8f8cSSatish Balay           col++; a += bs;
768a30f8f8cSSatish Balay         }
769a30f8f8cSSatish Balay       }
770a30f8f8cSSatish Balay     }
771a30f8f8cSSatish Balay     /* copy over the B part */
77265d70643SHong Zhang     Bloc = (Mat_SeqBAIJ*)baij->B->data;
77365d70643SHong Zhang     ai = Bloc->i; aj = Bloc->j; a = Bloc->a;
774a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
775a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
776a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
777a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
778a30f8f8cSSatish Balay         col = baij->garray[aj[j]]*bs;
779a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
780a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
781a30f8f8cSSatish Balay           col++; a += bs;
782a30f8f8cSSatish Balay         }
783a30f8f8cSSatish Balay       }
784a30f8f8cSSatish Balay     }
785a30f8f8cSSatish Balay     ierr = PetscFree(rvals);CHKERRQ(ierr);
786a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
787a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
788a30f8f8cSSatish Balay     /*
789a30f8f8cSSatish Balay        Everyone has to call to draw the matrix since the graphics waits are
790b0a32e0cSBarry Smith        synchronized across all processors that share the PetscDraw object
791a30f8f8cSSatish Balay     */
792b0a32e0cSBarry Smith     ierr = PetscViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
79365d70643SHong Zhang     if (!rank) {
794e36acaf3SBarry Smith       ierr = PetscObjectSetName((PetscObject)((Mat_MPISBAIJ*)(A->data))->A,mat->name);CHKERRQ(ierr);
795a30f8f8cSSatish Balay       ierr = MatView(((Mat_MPISBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
796a30f8f8cSSatish Balay     }
797b0a32e0cSBarry Smith     ierr = PetscViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
798a30f8f8cSSatish Balay     ierr = MatDestroy(A);CHKERRQ(ierr);
799a30f8f8cSSatish Balay   }
800a30f8f8cSSatish Balay   PetscFunctionReturn(0);
801a30f8f8cSSatish Balay }
802a30f8f8cSSatish Balay 
8034a2ae208SSatish Balay #undef __FUNCT__
8044a2ae208SSatish Balay #define __FUNCT__ "MatView_MPISBAIJ"
805b0a32e0cSBarry Smith int MatView_MPISBAIJ(Mat mat,PetscViewer viewer)
806a30f8f8cSSatish Balay {
807a30f8f8cSSatish Balay   int        ierr;
808a30f8f8cSSatish Balay   PetscTruth isascii,isdraw,issocket,isbinary;
809a30f8f8cSSatish Balay 
810a30f8f8cSSatish Balay   PetscFunctionBegin;
811b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
812fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
813b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_SOCKET,&issocket);CHKERRQ(ierr);
814fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_BINARY,&isbinary);CHKERRQ(ierr);
815a30f8f8cSSatish Balay   if (isascii || isdraw || issocket || isbinary) {
816a30f8f8cSSatish Balay     ierr = MatView_MPISBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
817a30f8f8cSSatish Balay   } else {
81829bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by MPISBAIJ matrices",((PetscObject)viewer)->type_name);
819a30f8f8cSSatish Balay   }
820a30f8f8cSSatish Balay   PetscFunctionReturn(0);
821a30f8f8cSSatish Balay }
822a30f8f8cSSatish Balay 
8234a2ae208SSatish Balay #undef __FUNCT__
8244a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_MPISBAIJ"
825a30f8f8cSSatish Balay int MatDestroy_MPISBAIJ(Mat mat)
826a30f8f8cSSatish Balay {
827a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
828a30f8f8cSSatish Balay   int         ierr;
829a30f8f8cSSatish Balay 
830a30f8f8cSSatish Balay   PetscFunctionBegin;
831a30f8f8cSSatish Balay #if defined(PETSC_USE_LOG)
832b0a32e0cSBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%d,Cols=%d",mat->M,mat->N);
833a30f8f8cSSatish Balay #endif
834a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
835a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
836a30f8f8cSSatish Balay   ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
837a30f8f8cSSatish Balay   ierr = MatDestroy(baij->A);CHKERRQ(ierr);
838a30f8f8cSSatish Balay   ierr = MatDestroy(baij->B);CHKERRQ(ierr);
839a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
840a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
841a30f8f8cSSatish Balay #else
842a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
843a30f8f8cSSatish Balay #endif
844a30f8f8cSSatish Balay   if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
845a30f8f8cSSatish Balay   if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
846a30f8f8cSSatish Balay   if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
847a30f8f8cSSatish Balay   if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
848a30f8f8cSSatish Balay   if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
849a30f8f8cSSatish Balay   if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
850a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
851a30f8f8cSSatish Balay   if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
852a30f8f8cSSatish Balay #endif
853a30f8f8cSSatish Balay   ierr = PetscFree(baij);CHKERRQ(ierr);
854a30f8f8cSSatish Balay   PetscFunctionReturn(0);
855a30f8f8cSSatish Balay }
856a30f8f8cSSatish Balay 
8574a2ae208SSatish Balay #undef __FUNCT__
8584a2ae208SSatish Balay #define __FUNCT__ "MatMult_MPISBAIJ"
859a30f8f8cSSatish Balay int MatMult_MPISBAIJ(Mat A,Vec xx,Vec yy)
860a30f8f8cSSatish Balay {
861a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
862a30f8f8cSSatish Balay   int         ierr,nt;
863a30f8f8cSSatish Balay 
864a30f8f8cSSatish Balay   PetscFunctionBegin;
865a30f8f8cSSatish Balay   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
866b5df2d14SHong Zhang   if (nt != A->n) {
86729bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
868a30f8f8cSSatish Balay   }
869a30f8f8cSSatish Balay   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
870b5df2d14SHong Zhang   if (nt != A->m) {
87129bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
872a30f8f8cSSatish Balay   }
87365d70643SHong Zhang 
874b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
875b941877fSHong Zhang   /* do diagonal part */
876b941877fSHong Zhang   ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
877b941877fSHong Zhang   /* do supperdiagonal part */
878b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
879b941877fSHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
880b941877fSHong Zhang   /* do subdiagonal part */
881b941877fSHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
882b941877fSHong Zhang   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
883b941877fSHong Zhang   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
88465d70643SHong Zhang 
885a30f8f8cSSatish Balay   PetscFunctionReturn(0);
886a30f8f8cSSatish Balay }
887a30f8f8cSSatish Balay 
8884a2ae208SSatish Balay #undef __FUNCT__
8894a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_MPISBAIJ"
890a30f8f8cSSatish Balay int MatMultAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
891a30f8f8cSSatish Balay {
892de8b6608SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
893aa482183SHong Zhang   int        ierr;
894a30f8f8cSSatish Balay 
895a30f8f8cSSatish Balay   PetscFunctionBegin;
896b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
897b941877fSHong Zhang   /* do diagonal part */
898b941877fSHong Zhang   ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
899b941877fSHong Zhang   /* do supperdiagonal part */
900b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
901de8b6608SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
902de8b6608SHong Zhang 
903b941877fSHong Zhang   /* do subdiagonal part */
904a30f8f8cSSatish Balay   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
905a30f8f8cSSatish Balay   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
906a30f8f8cSSatish Balay   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
907aa482183SHong Zhang 
908a30f8f8cSSatish Balay   PetscFunctionReturn(0);
909a30f8f8cSSatish Balay }
910a30f8f8cSSatish Balay 
9114a2ae208SSatish Balay #undef __FUNCT__
9124a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_MPISBAIJ"
913a30f8f8cSSatish Balay int MatMultTranspose_MPISBAIJ(Mat A,Vec xx,Vec yy)
914a30f8f8cSSatish Balay {
915a30f8f8cSSatish Balay   PetscFunctionBegin;
91629bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMult().");
91796e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
918a30f8f8cSSatish Balay }
919a30f8f8cSSatish Balay 
9204a2ae208SSatish Balay #undef __FUNCT__
9214a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_MPISBAIJ"
922a30f8f8cSSatish Balay int MatMultTransposeAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
923a30f8f8cSSatish Balay {
924a30f8f8cSSatish Balay   PetscFunctionBegin;
92529bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMultAdd().");
92696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
927a30f8f8cSSatish Balay }
928a30f8f8cSSatish Balay 
929a30f8f8cSSatish Balay /*
930a30f8f8cSSatish Balay   This only works correctly for square matrices where the subblock A->A is the
931a30f8f8cSSatish Balay    diagonal block
932a30f8f8cSSatish Balay */
9334a2ae208SSatish Balay #undef __FUNCT__
9344a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_MPISBAIJ"
935a30f8f8cSSatish Balay int MatGetDiagonal_MPISBAIJ(Mat A,Vec v)
936a30f8f8cSSatish Balay {
937a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
938a30f8f8cSSatish Balay   int         ierr;
939a30f8f8cSSatish Balay 
940a30f8f8cSSatish Balay   PetscFunctionBegin;
94129bbc08cSBarry Smith   /* if (a->M != a->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block"); */
942a30f8f8cSSatish Balay   ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
943a30f8f8cSSatish Balay   PetscFunctionReturn(0);
944a30f8f8cSSatish Balay }
945a30f8f8cSSatish Balay 
9464a2ae208SSatish Balay #undef __FUNCT__
9474a2ae208SSatish Balay #define __FUNCT__ "MatScale_MPISBAIJ"
948a30f8f8cSSatish Balay int MatScale_MPISBAIJ(Scalar *aa,Mat A)
949a30f8f8cSSatish Balay {
950a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
951a30f8f8cSSatish Balay   int         ierr;
952a30f8f8cSSatish Balay 
953a30f8f8cSSatish Balay   PetscFunctionBegin;
954a30f8f8cSSatish Balay   ierr = MatScale(aa,a->A);CHKERRQ(ierr);
955a30f8f8cSSatish Balay   ierr = MatScale(aa,a->B);CHKERRQ(ierr);
956a30f8f8cSSatish Balay   PetscFunctionReturn(0);
957a30f8f8cSSatish Balay }
958a30f8f8cSSatish Balay 
9594a2ae208SSatish Balay #undef __FUNCT__
9604a2ae208SSatish Balay #define __FUNCT__ "MatGetOwnershipRange_MPISBAIJ"
961a30f8f8cSSatish Balay int MatGetOwnershipRange_MPISBAIJ(Mat matin,int *m,int *n)
962a30f8f8cSSatish Balay {
963a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
964a30f8f8cSSatish Balay 
965a30f8f8cSSatish Balay   PetscFunctionBegin;
966a30f8f8cSSatish Balay   if (m) *m = mat->rstart*mat->bs;
967a30f8f8cSSatish Balay   if (n) *n = mat->rend*mat->bs;
968a30f8f8cSSatish Balay   PetscFunctionReturn(0);
969a30f8f8cSSatish Balay }
970a30f8f8cSSatish Balay 
9714a2ae208SSatish Balay #undef __FUNCT__
9724a2ae208SSatish Balay #define __FUNCT__ "MatGetRow_MPISBAIJ"
973a30f8f8cSSatish Balay int MatGetRow_MPISBAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
974a30f8f8cSSatish Balay {
975a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
976a30f8f8cSSatish Balay   Scalar     *vworkA,*vworkB,**pvA,**pvB,*v_p;
977a30f8f8cSSatish Balay   int        bs = mat->bs,bs2 = mat->bs2,i,ierr,*cworkA,*cworkB,**pcA,**pcB;
978a30f8f8cSSatish Balay   int        nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
979a30f8f8cSSatish Balay   int        *cmap,*idx_p,cstart = mat->cstart;
980a30f8f8cSSatish Balay 
981a30f8f8cSSatish Balay   PetscFunctionBegin;
98229bbc08cSBarry Smith   if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
983a30f8f8cSSatish Balay   mat->getrowactive = PETSC_TRUE;
984a30f8f8cSSatish Balay 
985a30f8f8cSSatish Balay   if (!mat->rowvalues && (idx || v)) {
986a30f8f8cSSatish Balay     /*
987a30f8f8cSSatish Balay         allocate enough space to hold information from the longest row.
988a30f8f8cSSatish Balay     */
989a30f8f8cSSatish Balay     Mat_SeqSBAIJ *Aa = (Mat_SeqSBAIJ*)mat->A->data;
990a30f8f8cSSatish Balay     Mat_SeqBAIJ  *Ba = (Mat_SeqBAIJ*)mat->B->data;
991a30f8f8cSSatish Balay     int     max = 1,mbs = mat->mbs,tmp;
992a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
993a30f8f8cSSatish Balay       tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i]; /* row length */
994a30f8f8cSSatish Balay       if (max < tmp) { max = tmp; }
995a30f8f8cSSatish Balay     }
996b0a32e0cSBarry Smith     ierr = PetscMalloc(max*bs2*(sizeof(int)+sizeof(Scalar)),&mat->rowvalues);CHKERRQ(ierr);
997a30f8f8cSSatish Balay     mat->rowindices = (int*)(mat->rowvalues + max*bs2);
998a30f8f8cSSatish Balay   }
999a30f8f8cSSatish Balay 
100029bbc08cSBarry Smith   if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
1001a30f8f8cSSatish Balay   lrow = row - brstart;  /* local row index */
1002a30f8f8cSSatish Balay 
1003a30f8f8cSSatish Balay   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1004a30f8f8cSSatish Balay   if (!v)   {pvA = 0; pvB = 0;}
1005a30f8f8cSSatish Balay   if (!idx) {pcA = 0; if (!v) pcB = 0;}
1006a30f8f8cSSatish Balay   ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1007a30f8f8cSSatish Balay   ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1008a30f8f8cSSatish Balay   nztot = nzA + nzB;
1009a30f8f8cSSatish Balay 
1010a30f8f8cSSatish Balay   cmap  = mat->garray;
1011a30f8f8cSSatish Balay   if (v  || idx) {
1012a30f8f8cSSatish Balay     if (nztot) {
1013a30f8f8cSSatish Balay       /* Sort by increasing column numbers, assuming A and B already sorted */
1014a30f8f8cSSatish Balay       int imark = -1;
1015a30f8f8cSSatish Balay       if (v) {
1016a30f8f8cSSatish Balay         *v = v_p = mat->rowvalues;
1017a30f8f8cSSatish Balay         for (i=0; i<nzB; i++) {
1018a30f8f8cSSatish Balay           if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
1019a30f8f8cSSatish Balay           else break;
1020a30f8f8cSSatish Balay         }
1021a30f8f8cSSatish Balay         imark = i;
1022a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
1023a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
1024a30f8f8cSSatish Balay       }
1025a30f8f8cSSatish Balay       if (idx) {
1026a30f8f8cSSatish Balay         *idx = idx_p = mat->rowindices;
1027a30f8f8cSSatish Balay         if (imark > -1) {
1028a30f8f8cSSatish Balay           for (i=0; i<imark; i++) {
1029a30f8f8cSSatish Balay             idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
1030a30f8f8cSSatish Balay           }
1031a30f8f8cSSatish Balay         } else {
1032a30f8f8cSSatish Balay           for (i=0; i<nzB; i++) {
1033a30f8f8cSSatish Balay             if (cmap[cworkB[i]/bs] < cstart)
1034a30f8f8cSSatish Balay               idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1035a30f8f8cSSatish Balay             else break;
1036a30f8f8cSSatish Balay           }
1037a30f8f8cSSatish Balay           imark = i;
1038a30f8f8cSSatish Balay         }
1039a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
1040a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1041a30f8f8cSSatish Balay       }
1042a30f8f8cSSatish Balay     } else {
1043a30f8f8cSSatish Balay       if (idx) *idx = 0;
1044a30f8f8cSSatish Balay       if (v)   *v   = 0;
1045a30f8f8cSSatish Balay     }
1046a30f8f8cSSatish Balay   }
1047a30f8f8cSSatish Balay   *nz = nztot;
1048a30f8f8cSSatish Balay   ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1049a30f8f8cSSatish Balay   ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1050a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1051a30f8f8cSSatish Balay }
1052a30f8f8cSSatish Balay 
10534a2ae208SSatish Balay #undef __FUNCT__
10544a2ae208SSatish Balay #define __FUNCT__ "MatRestoreRow_MPISBAIJ"
1055a30f8f8cSSatish Balay int MatRestoreRow_MPISBAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
1056a30f8f8cSSatish Balay {
1057a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1058a30f8f8cSSatish Balay 
1059a30f8f8cSSatish Balay   PetscFunctionBegin;
1060a30f8f8cSSatish Balay   if (baij->getrowactive == PETSC_FALSE) {
106129bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
1062a30f8f8cSSatish Balay   }
1063a30f8f8cSSatish Balay   baij->getrowactive = PETSC_FALSE;
1064a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1065a30f8f8cSSatish Balay }
1066a30f8f8cSSatish Balay 
10674a2ae208SSatish Balay #undef __FUNCT__
10684a2ae208SSatish Balay #define __FUNCT__ "MatGetBlockSize_MPISBAIJ"
1069a30f8f8cSSatish Balay int MatGetBlockSize_MPISBAIJ(Mat mat,int *bs)
1070a30f8f8cSSatish Balay {
1071a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1072a30f8f8cSSatish Balay 
1073a30f8f8cSSatish Balay   PetscFunctionBegin;
1074a30f8f8cSSatish Balay   *bs = baij->bs;
1075a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1076a30f8f8cSSatish Balay }
1077a30f8f8cSSatish Balay 
10784a2ae208SSatish Balay #undef __FUNCT__
10794a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_MPISBAIJ"
1080a30f8f8cSSatish Balay int MatZeroEntries_MPISBAIJ(Mat A)
1081a30f8f8cSSatish Balay {
1082a30f8f8cSSatish Balay   Mat_MPISBAIJ *l = (Mat_MPISBAIJ*)A->data;
1083a30f8f8cSSatish Balay   int         ierr;
1084a30f8f8cSSatish Balay 
1085a30f8f8cSSatish Balay   PetscFunctionBegin;
1086a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
1087a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
1088a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1089a30f8f8cSSatish Balay }
1090a30f8f8cSSatish Balay 
10914a2ae208SSatish Balay #undef __FUNCT__
10924a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_MPISBAIJ"
1093a30f8f8cSSatish Balay int MatGetInfo_MPISBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
1094a30f8f8cSSatish Balay {
1095a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)matin->data;
1096a30f8f8cSSatish Balay   Mat         A = a->A,B = a->B;
1097a30f8f8cSSatish Balay   int         ierr;
1098a30f8f8cSSatish Balay   PetscReal   isend[5],irecv[5];
1099a30f8f8cSSatish Balay 
1100a30f8f8cSSatish Balay   PetscFunctionBegin;
1101a30f8f8cSSatish Balay   info->block_size     = (double)a->bs;
1102a30f8f8cSSatish Balay   ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
1103a30f8f8cSSatish Balay   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
1104a30f8f8cSSatish Balay   isend[3] = info->memory;  isend[4] = info->mallocs;
1105a30f8f8cSSatish Balay   ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
1106a30f8f8cSSatish Balay   isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
1107a30f8f8cSSatish Balay   isend[3] += info->memory;  isend[4] += info->mallocs;
1108a30f8f8cSSatish Balay   if (flag == MAT_LOCAL) {
1109a30f8f8cSSatish Balay     info->nz_used      = isend[0];
1110a30f8f8cSSatish Balay     info->nz_allocated = isend[1];
1111a30f8f8cSSatish Balay     info->nz_unneeded  = isend[2];
1112a30f8f8cSSatish Balay     info->memory       = isend[3];
1113a30f8f8cSSatish Balay     info->mallocs      = isend[4];
1114a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_MAX) {
1115a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_MAX,matin->comm);CHKERRQ(ierr);
1116a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1117a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1118a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1119a30f8f8cSSatish Balay     info->memory       = irecv[3];
1120a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1121a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_SUM) {
1122a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_SUM,matin->comm);CHKERRQ(ierr);
1123a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1124a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1125a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1126a30f8f8cSSatish Balay     info->memory       = irecv[3];
1127a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1128a30f8f8cSSatish Balay   } else {
112929bbc08cSBarry Smith     SETERRQ1(1,"Unknown MatInfoType argument %d",flag);
1130a30f8f8cSSatish Balay   }
1131b5df2d14SHong Zhang   info->rows_global       = (double)A->M;
1132b5df2d14SHong Zhang   info->columns_global    = (double)A->N;
1133b5df2d14SHong Zhang   info->rows_local        = (double)A->m;
1134b5df2d14SHong Zhang   info->columns_local     = (double)A->N;
1135a30f8f8cSSatish Balay   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
1136a30f8f8cSSatish Balay   info->fill_ratio_needed = 0;
1137a30f8f8cSSatish Balay   info->factor_mallocs    = 0;
1138a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1139a30f8f8cSSatish Balay }
1140a30f8f8cSSatish Balay 
11414a2ae208SSatish Balay #undef __FUNCT__
11424a2ae208SSatish Balay #define __FUNCT__ "MatSetOption_MPISBAIJ"
1143a30f8f8cSSatish Balay int MatSetOption_MPISBAIJ(Mat A,MatOption op)
1144a30f8f8cSSatish Balay {
1145a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1146a30f8f8cSSatish Balay   int         ierr;
1147a30f8f8cSSatish Balay 
1148a30f8f8cSSatish Balay   PetscFunctionBegin;
1149e98b92d7SKris Buschelman   switch (op) {
1150e98b92d7SKris Buschelman   case MAT_NO_NEW_NONZERO_LOCATIONS:
1151e98b92d7SKris Buschelman   case MAT_YES_NEW_NONZERO_LOCATIONS:
1152e98b92d7SKris Buschelman   case MAT_COLUMNS_UNSORTED:
1153e98b92d7SKris Buschelman   case MAT_COLUMNS_SORTED:
1154e98b92d7SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
1155e98b92d7SKris Buschelman   case MAT_KEEP_ZEROED_ROWS:
1156e98b92d7SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
1157a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1158a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1159e98b92d7SKris Buschelman     break;
1160e98b92d7SKris Buschelman   case MAT_ROW_ORIENTED:
1161a30f8f8cSSatish Balay     a->roworiented = PETSC_TRUE;
1162a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1163a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1164e98b92d7SKris Buschelman     break;
1165e98b92d7SKris Buschelman   case MAT_ROWS_SORTED:
1166e98b92d7SKris Buschelman   case MAT_ROWS_UNSORTED:
1167e98b92d7SKris Buschelman   case MAT_YES_NEW_DIAGONALS:
1168e98b92d7SKris Buschelman   case MAT_USE_HASH_TABLE:
1169*d03495bdSKris Buschelman   case MAT_USE_SINGLE_PRECISION_SOLVES:
1170b0a32e0cSBarry Smith     PetscLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
1171e98b92d7SKris Buschelman     break;
1172e98b92d7SKris Buschelman   case MAT_COLUMN_ORIENTED:
1173a30f8f8cSSatish Balay     a->roworiented = PETSC_FALSE;
1174a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1175a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1176e98b92d7SKris Buschelman     break;
1177e98b92d7SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
1178a30f8f8cSSatish Balay     a->donotstash = PETSC_TRUE;
1179e98b92d7SKris Buschelman     break;
1180e98b92d7SKris Buschelman   case MAT_NO_NEW_DIAGONALS:
118129bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
1182e98b92d7SKris Buschelman     break;
1183e98b92d7SKris Buschelman   case MAT_USE_HASH_TABLE:
1184a30f8f8cSSatish Balay     a->ht_flag = PETSC_TRUE;
1185e98b92d7SKris Buschelman     break;
1186e98b92d7SKris Buschelman   default:
118729bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"unknown option");
1188e98b92d7SKris Buschelman     break;
1189a30f8f8cSSatish Balay   }
1190a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1191a30f8f8cSSatish Balay }
1192a30f8f8cSSatish Balay 
11934a2ae208SSatish Balay #undef __FUNCT__
11944a2ae208SSatish Balay #define __FUNCT__ "MatTranspose_MPISBAIJ("
1195a30f8f8cSSatish Balay int MatTranspose_MPISBAIJ(Mat A,Mat *matout)
1196a30f8f8cSSatish Balay {
1197a30f8f8cSSatish Balay   PetscFunctionBegin;
119829bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. MatTranspose() should not be called");
119996e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
1200a30f8f8cSSatish Balay }
1201a30f8f8cSSatish Balay 
12024a2ae208SSatish Balay #undef __FUNCT__
12034a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_MPISBAIJ"
1204a30f8f8cSSatish Balay int MatDiagonalScale_MPISBAIJ(Mat mat,Vec ll,Vec rr)
1205a30f8f8cSSatish Balay {
1206a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1207a30f8f8cSSatish Balay   Mat         a = baij->A,b = baij->B;
1208a30f8f8cSSatish Balay   int         ierr,s1,s2,s3;
1209a30f8f8cSSatish Balay 
1210a30f8f8cSSatish Balay   PetscFunctionBegin;
1211a30f8f8cSSatish Balay   if (ll != rr) {
121229bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n");
1213a30f8f8cSSatish Balay   }
1214a30f8f8cSSatish Balay   ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
1215a30f8f8cSSatish Balay   if (rr) {
1216a30f8f8cSSatish Balay     ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
121729bbc08cSBarry Smith     if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
1218a30f8f8cSSatish Balay     /* Overlap communication with computation. */
1219a30f8f8cSSatish Balay     ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1220a30f8f8cSSatish Balay     /*} if (ll) { */
1221a30f8f8cSSatish Balay     ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
122229bbc08cSBarry Smith     if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
1223a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
1224a30f8f8cSSatish Balay     /* } */
1225a30f8f8cSSatish Balay   /* scale  the diagonal block */
1226a30f8f8cSSatish Balay   ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);
1227a30f8f8cSSatish Balay 
1228a30f8f8cSSatish Balay   /* if (rr) { */
1229a30f8f8cSSatish Balay     /* Do a scatter end and then right scale the off-diagonal block */
1230a30f8f8cSSatish Balay     ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1231a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
1232a30f8f8cSSatish Balay   }
1233a30f8f8cSSatish Balay 
1234a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1235a30f8f8cSSatish Balay }
1236a30f8f8cSSatish Balay 
12374a2ae208SSatish Balay #undef __FUNCT__
12384a2ae208SSatish Balay #define __FUNCT__ "MatZeroRows_MPISBAIJ"
1239a30f8f8cSSatish Balay int MatZeroRows_MPISBAIJ(Mat A,IS is,Scalar *diag)
1240a30f8f8cSSatish Balay {
1241a30f8f8cSSatish Balay   Mat_MPISBAIJ   *l = (Mat_MPISBAIJ*)A->data;
1242a30f8f8cSSatish Balay   int            i,ierr,N,*rows,*owners = l->rowners,size = l->size;
124335d8aa7fSBarry Smith   int            *procs,*nprocs,j,idx,nsends,*work,row;
1244a30f8f8cSSatish Balay   int            nmax,*svalues,*starts,*owner,nrecvs,rank = l->rank;
1245a30f8f8cSSatish Balay   int            *rvalues,tag = A->tag,count,base,slen,n,*source;
1246a30f8f8cSSatish Balay   int            *lens,imdex,*lrows,*values,bs=l->bs,rstart_bs=l->rstart_bs;
1247a30f8f8cSSatish Balay   MPI_Comm       comm = A->comm;
1248a30f8f8cSSatish Balay   MPI_Request    *send_waits,*recv_waits;
1249a30f8f8cSSatish Balay   MPI_Status     recv_status,*send_status;
1250a30f8f8cSSatish Balay   IS             istmp;
125135d8aa7fSBarry Smith   PetscTruth     found;
1252a30f8f8cSSatish Balay 
1253a30f8f8cSSatish Balay   PetscFunctionBegin;
1254a30f8f8cSSatish Balay   ierr = ISGetSize(is,&N);CHKERRQ(ierr);
1255a30f8f8cSSatish Balay   ierr = ISGetIndices(is,&rows);CHKERRQ(ierr);
1256a30f8f8cSSatish Balay 
1257a30f8f8cSSatish Balay   /*  first count number of contributors to each processor */
125882502324SSatish Balay   ierr  = PetscMalloc(2*size*sizeof(int),&nprocs);CHKERRQ(ierr);
1259a30f8f8cSSatish Balay   ierr  = PetscMemzero(nprocs,2*size*sizeof(int));CHKERRQ(ierr);
1260a30f8f8cSSatish Balay   procs = nprocs + size;
1261b0a32e0cSBarry Smith   ierr  = PetscMalloc((N+1)*sizeof(int),&owner);CHKERRQ(ierr); /* see note*/
1262a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1263a30f8f8cSSatish Balay     idx   = rows[i];
126435d8aa7fSBarry Smith     found = PETSC_FALSE;
1265a30f8f8cSSatish Balay     for (j=0; j<size; j++) {
1266a30f8f8cSSatish Balay       if (idx >= owners[j]*bs && idx < owners[j+1]*bs) {
126735d8aa7fSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = PETSC_TRUE; break;
1268a30f8f8cSSatish Balay       }
1269a30f8f8cSSatish Balay     }
127029bbc08cSBarry Smith     if (!found) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
1271a30f8f8cSSatish Balay   }
1272a30f8f8cSSatish Balay   nsends = 0;  for (i=0; i<size; i++) { nsends += procs[i];}
1273a30f8f8cSSatish Balay 
1274a30f8f8cSSatish Balay   /* inform other processors of number of messages and max length*/
127582502324SSatish Balay   ierr   = PetscMalloc(2*size*sizeof(int),&work);CHKERRQ(ierr);
1276a30f8f8cSSatish Balay   ierr   = MPI_Allreduce(nprocs,work,2*size,MPI_INT,PetscMaxSum_Op,comm);CHKERRQ(ierr);
1277a30f8f8cSSatish Balay   nmax   = work[rank];
1278a30f8f8cSSatish Balay   nrecvs = work[size+rank];
1279a30f8f8cSSatish Balay   ierr   = PetscFree(work);CHKERRQ(ierr);
1280a30f8f8cSSatish Balay 
1281a30f8f8cSSatish Balay   /* post receives:   */
1282b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*(nmax+1)*sizeof(int),&rvalues);CHKERRQ(ierr);
1283b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
1284a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1285a30f8f8cSSatish Balay     ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPI_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
1286a30f8f8cSSatish Balay   }
1287a30f8f8cSSatish Balay 
1288a30f8f8cSSatish Balay   /* do sends:
1289a30f8f8cSSatish Balay      1) starts[i] gives the starting index in svalues for stuff going to
1290a30f8f8cSSatish Balay      the ith processor
1291a30f8f8cSSatish Balay   */
1292b0a32e0cSBarry Smith   ierr = PetscMalloc((N+1)*sizeof(int),&svalues);CHKERRQ(ierr);
1293b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
1294b0a32e0cSBarry Smith   ierr = PetscMalloc((size+1)*sizeof(int),&starts);CHKERRQ(ierr);
1295a30f8f8cSSatish Balay   starts[0]  = 0;
1296a30f8f8cSSatish Balay   for (i=1; i<size; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1297a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1298a30f8f8cSSatish Balay     svalues[starts[owner[i]]++] = rows[i];
1299a30f8f8cSSatish Balay   }
1300a30f8f8cSSatish Balay   ierr = ISRestoreIndices(is,&rows);CHKERRQ(ierr);
1301a30f8f8cSSatish Balay 
1302a30f8f8cSSatish Balay   starts[0] = 0;
1303a30f8f8cSSatish Balay   for (i=1; i<size+1; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1304a30f8f8cSSatish Balay   count = 0;
1305a30f8f8cSSatish Balay   for (i=0; i<size; i++) {
1306a30f8f8cSSatish Balay     if (procs[i]) {
1307a30f8f8cSSatish Balay       ierr = MPI_Isend(svalues+starts[i],nprocs[i],MPI_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
1308a30f8f8cSSatish Balay     }
1309a30f8f8cSSatish Balay   }
1310a30f8f8cSSatish Balay   ierr = PetscFree(starts);CHKERRQ(ierr);
1311a30f8f8cSSatish Balay 
1312a30f8f8cSSatish Balay   base = owners[rank]*bs;
1313a30f8f8cSSatish Balay 
1314a30f8f8cSSatish Balay   /*  wait on receives */
1315b0a32e0cSBarry Smith   ierr   = PetscMalloc(2*(nrecvs+1)*sizeof(int),&lens);CHKERRQ(ierr);
1316a30f8f8cSSatish Balay   source = lens + nrecvs;
1317a30f8f8cSSatish Balay   count  = nrecvs; slen = 0;
1318a30f8f8cSSatish Balay   while (count) {
1319a30f8f8cSSatish Balay     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
1320a30f8f8cSSatish Balay     /* unpack receives into our local space */
1321a30f8f8cSSatish Balay     ierr = MPI_Get_count(&recv_status,MPI_INT,&n);CHKERRQ(ierr);
1322a30f8f8cSSatish Balay     source[imdex]  = recv_status.MPI_SOURCE;
1323a30f8f8cSSatish Balay     lens[imdex]    = n;
1324a30f8f8cSSatish Balay     slen          += n;
1325a30f8f8cSSatish Balay     count--;
1326a30f8f8cSSatish Balay   }
1327a30f8f8cSSatish Balay   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
1328a30f8f8cSSatish Balay 
1329a30f8f8cSSatish Balay   /* move the data into the send scatter */
1330b0a32e0cSBarry Smith   ierr = PetscMalloc((slen+1)*sizeof(int),&lrows);CHKERRQ(ierr);
1331a30f8f8cSSatish Balay   count = 0;
1332a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1333a30f8f8cSSatish Balay     values = rvalues + i*nmax;
1334a30f8f8cSSatish Balay     for (j=0; j<lens[i]; j++) {
1335a30f8f8cSSatish Balay       lrows[count++] = values[j] - base;
1336a30f8f8cSSatish Balay     }
1337a30f8f8cSSatish Balay   }
1338a30f8f8cSSatish Balay   ierr = PetscFree(rvalues);CHKERRQ(ierr);
1339a30f8f8cSSatish Balay   ierr = PetscFree(lens);CHKERRQ(ierr);
1340a30f8f8cSSatish Balay   ierr = PetscFree(owner);CHKERRQ(ierr);
1341a30f8f8cSSatish Balay   ierr = PetscFree(nprocs);CHKERRQ(ierr);
1342a30f8f8cSSatish Balay 
1343a30f8f8cSSatish Balay   /* actually zap the local rows */
1344a30f8f8cSSatish Balay   ierr = ISCreateGeneral(PETSC_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
1345b0a32e0cSBarry Smith   PetscLogObjectParent(A,istmp);
1346a30f8f8cSSatish Balay 
1347a30f8f8cSSatish Balay   /*
1348a30f8f8cSSatish Balay         Zero the required rows. If the "diagonal block" of the matrix
1349a30f8f8cSSatish Balay      is square and the user wishes to set the diagonal we use seperate
1350a30f8f8cSSatish Balay      code so that MatSetValues() is not called for each diagonal allocating
1351a30f8f8cSSatish Balay      new memory, thus calling lots of mallocs and slowing things down.
1352a30f8f8cSSatish Balay 
1353a30f8f8cSSatish Balay        Contributed by: Mathew Knepley
1354a30f8f8cSSatish Balay   */
1355a30f8f8cSSatish Balay   /* must zero l->B before l->A because the (diag) case below may put values into l->B*/
1356ff64ff16SBarry Smith   ierr = MatZeroRows_SeqBAIJ(l->B,istmp,0);CHKERRQ(ierr);
1357a30f8f8cSSatish Balay   if (diag && (l->A->M == l->A->N)) {
1358a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,diag);CHKERRQ(ierr);
1359a30f8f8cSSatish Balay   } else if (diag) {
1360a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1361a30f8f8cSSatish Balay     if (((Mat_SeqSBAIJ*)l->A->data)->nonew) {
136229bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\
1363a30f8f8cSSatish Balay MAT_NO_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR");
1364a30f8f8cSSatish Balay     }
1365a30f8f8cSSatish Balay     for (i=0; i<slen; i++) {
1366a30f8f8cSSatish Balay       row  = lrows[i] + rstart_bs;
1367a30f8f8cSSatish Balay       ierr = MatSetValues(A,1,&row,1,&row,diag,INSERT_VALUES);CHKERRQ(ierr);
1368a30f8f8cSSatish Balay     }
1369a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1370a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1371a30f8f8cSSatish Balay   } else {
1372a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1373a30f8f8cSSatish Balay   }
1374a30f8f8cSSatish Balay 
1375a30f8f8cSSatish Balay   ierr = ISDestroy(istmp);CHKERRQ(ierr);
1376a30f8f8cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
1377a30f8f8cSSatish Balay 
1378a30f8f8cSSatish Balay   /* wait on sends */
1379a30f8f8cSSatish Balay   if (nsends) {
138082502324SSatish Balay     ierr = PetscMalloc(nsends*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
1381a30f8f8cSSatish Balay     ierr        = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
1382a30f8f8cSSatish Balay     ierr        = PetscFree(send_status);CHKERRQ(ierr);
1383a30f8f8cSSatish Balay   }
1384a30f8f8cSSatish Balay   ierr = PetscFree(send_waits);CHKERRQ(ierr);
1385a30f8f8cSSatish Balay   ierr = PetscFree(svalues);CHKERRQ(ierr);
1386a30f8f8cSSatish Balay 
1387a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1388a30f8f8cSSatish Balay }
1389a30f8f8cSSatish Balay 
13904a2ae208SSatish Balay #undef __FUNCT__
13914a2ae208SSatish Balay #define __FUNCT__ "MatPrintHelp_MPISBAIJ"
1392a30f8f8cSSatish Balay int MatPrintHelp_MPISBAIJ(Mat A)
1393a30f8f8cSSatish Balay {
1394a30f8f8cSSatish Balay   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1395a30f8f8cSSatish Balay   MPI_Comm    comm = A->comm;
1396a30f8f8cSSatish Balay   static int  called = 0;
1397a30f8f8cSSatish Balay   int         ierr;
1398a30f8f8cSSatish Balay 
1399a30f8f8cSSatish Balay   PetscFunctionBegin;
1400a30f8f8cSSatish Balay   if (!a->rank) {
1401a30f8f8cSSatish Balay     ierr = MatPrintHelp_SeqSBAIJ(a->A);CHKERRQ(ierr);
1402a30f8f8cSSatish Balay   }
1403a30f8f8cSSatish Balay   if (called) {PetscFunctionReturn(0);} else called = 1;
1404a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm," Options for MATMPISBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
1405a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
1406a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1407a30f8f8cSSatish Balay }
1408a30f8f8cSSatish Balay 
14094a2ae208SSatish Balay #undef __FUNCT__
14104a2ae208SSatish Balay #define __FUNCT__ "MatSetUnfactored_MPISBAIJ"
1411a30f8f8cSSatish Balay int MatSetUnfactored_MPISBAIJ(Mat A)
1412a30f8f8cSSatish Balay {
1413f3566a2aSHong Zhang   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1414a30f8f8cSSatish Balay   int         ierr;
1415a30f8f8cSSatish Balay 
1416a30f8f8cSSatish Balay   PetscFunctionBegin;
1417a30f8f8cSSatish Balay   ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
1418a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1419a30f8f8cSSatish Balay }
1420a30f8f8cSSatish Balay 
1421a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat,MatDuplicateOption,Mat *);
1422a30f8f8cSSatish Balay 
14234a2ae208SSatish Balay #undef __FUNCT__
14244a2ae208SSatish Balay #define __FUNCT__ "MatEqual_MPISBAIJ"
1425a30f8f8cSSatish Balay int MatEqual_MPISBAIJ(Mat A,Mat B,PetscTruth *flag)
1426a30f8f8cSSatish Balay {
1427a30f8f8cSSatish Balay   Mat_MPISBAIJ *matB = (Mat_MPISBAIJ*)B->data,*matA = (Mat_MPISBAIJ*)A->data;
1428a30f8f8cSSatish Balay   Mat         a,b,c,d;
1429a30f8f8cSSatish Balay   PetscTruth  flg;
1430a30f8f8cSSatish Balay   int         ierr;
1431a30f8f8cSSatish Balay 
1432a30f8f8cSSatish Balay   PetscFunctionBegin;
1433b5df2d14SHong Zhang   ierr = PetscTypeCompare((PetscObject)B,MATMPISBAIJ,&flg);CHKERRQ(ierr);
1434b5df2d14SHong Zhang   if (!flg) SETERRQ(PETSC_ERR_ARG_INCOMP,"Matrices must be same type");
1435a30f8f8cSSatish Balay   a = matA->A; b = matA->B;
1436a30f8f8cSSatish Balay   c = matB->A; d = matB->B;
1437a30f8f8cSSatish Balay 
1438a30f8f8cSSatish Balay   ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
1439a30f8f8cSSatish Balay   if (flg == PETSC_TRUE) {
1440a30f8f8cSSatish Balay     ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
1441a30f8f8cSSatish Balay   }
1442a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
1443a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1444a30f8f8cSSatish Balay }
1445a30f8f8cSSatish Balay 
14464a2ae208SSatish Balay #undef __FUNCT__
14474a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation_MPISBAIJ"
1448273d9f13SBarry Smith int MatSetUpPreallocation_MPISBAIJ(Mat A)
1449273d9f13SBarry Smith {
1450273d9f13SBarry Smith   int        ierr;
1451273d9f13SBarry Smith 
1452273d9f13SBarry Smith   PetscFunctionBegin;
1453273d9f13SBarry Smith   ierr = MatMPISBAIJSetPreallocation(A,1,PETSC_DEFAULT,0,PETSC_DEFAULT,0);CHKERRQ(ierr);
1454273d9f13SBarry Smith   PetscFunctionReturn(0);
1455273d9f13SBarry Smith }
1456a30f8f8cSSatish Balay /* -------------------------------------------------------------------*/
1457a30f8f8cSSatish Balay static struct _MatOps MatOps_Values = {
1458a30f8f8cSSatish Balay   MatSetValues_MPISBAIJ,
1459a30f8f8cSSatish Balay   MatGetRow_MPISBAIJ,
1460a30f8f8cSSatish Balay   MatRestoreRow_MPISBAIJ,
1461a30f8f8cSSatish Balay   MatMult_MPISBAIJ,
1462a30f8f8cSSatish Balay   MatMultAdd_MPISBAIJ,
1463a30f8f8cSSatish Balay   MatMultTranspose_MPISBAIJ,
1464a30f8f8cSSatish Balay   MatMultTransposeAdd_MPISBAIJ,
1465a30f8f8cSSatish Balay   0,
1466a30f8f8cSSatish Balay   0,
1467a30f8f8cSSatish Balay   0,
1468a30f8f8cSSatish Balay   0,
1469a30f8f8cSSatish Balay   0,
1470a30f8f8cSSatish Balay   0,
1471a30f8f8cSSatish Balay   0,
1472a30f8f8cSSatish Balay   MatTranspose_MPISBAIJ,
1473a30f8f8cSSatish Balay   MatGetInfo_MPISBAIJ,
1474a30f8f8cSSatish Balay   MatEqual_MPISBAIJ,
1475a30f8f8cSSatish Balay   MatGetDiagonal_MPISBAIJ,
1476a30f8f8cSSatish Balay   MatDiagonalScale_MPISBAIJ,
1477a30f8f8cSSatish Balay   MatNorm_MPISBAIJ,
1478a30f8f8cSSatish Balay   MatAssemblyBegin_MPISBAIJ,
1479a30f8f8cSSatish Balay   MatAssemblyEnd_MPISBAIJ,
1480a30f8f8cSSatish Balay   0,
1481a30f8f8cSSatish Balay   MatSetOption_MPISBAIJ,
1482a30f8f8cSSatish Balay   MatZeroEntries_MPISBAIJ,
1483a30f8f8cSSatish Balay   MatZeroRows_MPISBAIJ,
1484a30f8f8cSSatish Balay   0,
1485a30f8f8cSSatish Balay   0,
1486a30f8f8cSSatish Balay   0,
1487a30f8f8cSSatish Balay   0,
1488273d9f13SBarry Smith   MatSetUpPreallocation_MPISBAIJ,
1489b5df2d14SHong Zhang   0,
1490a30f8f8cSSatish Balay   MatGetOwnershipRange_MPISBAIJ,
1491a30f8f8cSSatish Balay   0,
1492a30f8f8cSSatish Balay   0,
1493a30f8f8cSSatish Balay   0,
1494a30f8f8cSSatish Balay   0,
1495a30f8f8cSSatish Balay   MatDuplicate_MPISBAIJ,
1496a30f8f8cSSatish Balay   0,
1497a30f8f8cSSatish Balay   0,
1498a30f8f8cSSatish Balay   0,
1499a30f8f8cSSatish Balay   0,
1500a30f8f8cSSatish Balay   0,
1501a30f8f8cSSatish Balay   MatGetSubMatrices_MPISBAIJ,
1502a30f8f8cSSatish Balay   MatIncreaseOverlap_MPISBAIJ,
1503a30f8f8cSSatish Balay   MatGetValues_MPISBAIJ,
1504a30f8f8cSSatish Balay   0,
1505a30f8f8cSSatish Balay   MatPrintHelp_MPISBAIJ,
1506a30f8f8cSSatish Balay   MatScale_MPISBAIJ,
1507a30f8f8cSSatish Balay   0,
1508a30f8f8cSSatish Balay   0,
1509a30f8f8cSSatish Balay   0,
1510a30f8f8cSSatish Balay   MatGetBlockSize_MPISBAIJ,
1511a30f8f8cSSatish Balay   0,
1512a30f8f8cSSatish Balay   0,
1513a30f8f8cSSatish Balay   0,
1514a30f8f8cSSatish Balay   0,
1515a30f8f8cSSatish Balay   0,
1516a30f8f8cSSatish Balay   0,
1517a30f8f8cSSatish Balay   MatSetUnfactored_MPISBAIJ,
1518a30f8f8cSSatish Balay   0,
1519a30f8f8cSSatish Balay   MatSetValuesBlocked_MPISBAIJ,
1520a30f8f8cSSatish Balay   0,
1521a30f8f8cSSatish Balay   0,
1522a30f8f8cSSatish Balay   0,
152324d5174aSHong Zhang   MatGetMaps_Petsc,
152424d5174aSHong Zhang   0,
152524d5174aSHong Zhang   0,
152624d5174aSHong Zhang   0,
152724d5174aSHong Zhang   0,
152824d5174aSHong Zhang   0,
152924d5174aSHong Zhang   0,
153024d5174aSHong Zhang   MatGetRowMax_MPISBAIJ};
1531a30f8f8cSSatish Balay 
1532a30f8f8cSSatish Balay 
1533a30f8f8cSSatish Balay EXTERN_C_BEGIN
15344a2ae208SSatish Balay #undef __FUNCT__
15354a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonalBlock_MPISBAIJ"
1536a30f8f8cSSatish Balay int MatGetDiagonalBlock_MPISBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
1537a30f8f8cSSatish Balay {
1538a30f8f8cSSatish Balay   PetscFunctionBegin;
1539a30f8f8cSSatish Balay   *a      = ((Mat_MPISBAIJ *)A->data)->A;
1540a30f8f8cSSatish Balay   *iscopy = PETSC_FALSE;
1541a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1542a30f8f8cSSatish Balay }
1543a30f8f8cSSatish Balay EXTERN_C_END
1544a30f8f8cSSatish Balay 
1545273d9f13SBarry Smith EXTERN_C_BEGIN
15464a2ae208SSatish Balay #undef __FUNCT__
15474a2ae208SSatish Balay #define __FUNCT__ "MatCreate_MPISBAIJ"
1548b5df2d14SHong Zhang int MatCreate_MPISBAIJ(Mat B)
1549b5df2d14SHong Zhang {
1550b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1551ca54ac64SHong Zhang   int          ierr;
1552b5df2d14SHong Zhang   PetscTruth   flg;
1553b5df2d14SHong Zhang 
1554b5df2d14SHong Zhang   PetscFunctionBegin;
1555b5df2d14SHong Zhang 
1556b0a32e0cSBarry Smith   ierr    = PetscNew(Mat_MPISBAIJ,&b);CHKERRQ(ierr);
1557b0a32e0cSBarry Smith   B->data = (void*)b;
1558b5df2d14SHong Zhang   ierr    = PetscMemzero(b,sizeof(Mat_MPISBAIJ));CHKERRQ(ierr);
1559b5df2d14SHong Zhang   ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1560b5df2d14SHong Zhang 
1561b5df2d14SHong Zhang   B->ops->destroy    = MatDestroy_MPISBAIJ;
1562b5df2d14SHong Zhang   B->ops->view       = MatView_MPISBAIJ;
1563b5df2d14SHong Zhang   B->mapping    = 0;
1564b5df2d14SHong Zhang   B->factor     = 0;
1565b5df2d14SHong Zhang   B->assembled  = PETSC_FALSE;
1566b5df2d14SHong Zhang 
1567b5df2d14SHong Zhang   B->insertmode = NOT_SET_VALUES;
1568b5df2d14SHong Zhang   ierr = MPI_Comm_rank(B->comm,&b->rank);CHKERRQ(ierr);
1569b5df2d14SHong Zhang   ierr = MPI_Comm_size(B->comm,&b->size);CHKERRQ(ierr);
1570b5df2d14SHong Zhang 
1571b5df2d14SHong Zhang   /* build local table of row and column ownerships */
157282502324SSatish Balay   ierr          = PetscMalloc(3*(b->size+2)*sizeof(int),&b->rowners);CHKERRQ(ierr);
1573273d9f13SBarry Smith   b->cowners    = b->rowners + b->size + 2;
1574273d9f13SBarry Smith   b->rowners_bs = b->cowners + b->size + 2;
1575b0a32e0cSBarry Smith   PetscLogObjectMemory(B,3*(b->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1576b5df2d14SHong Zhang 
1577b5df2d14SHong Zhang   /* build cache for off array entries formed */
1578b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
1579b5df2d14SHong Zhang   b->donotstash  = PETSC_FALSE;
1580b5df2d14SHong Zhang   b->colmap      = PETSC_NULL;
1581b5df2d14SHong Zhang   b->garray      = PETSC_NULL;
1582b5df2d14SHong Zhang   b->roworiented = PETSC_TRUE;
1583b5df2d14SHong Zhang 
1584f2a5309cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
1585b5df2d14SHong Zhang   /* stuff for MatSetValues_XXX in single precision */
158664a35ccbSBarry Smith   b->setvalueslen     = 0;
1587b5df2d14SHong Zhang   b->setvaluescopy    = PETSC_NULL;
1588b5df2d14SHong Zhang #endif
1589b5df2d14SHong Zhang 
1590b5df2d14SHong Zhang   /* stuff used in block assembly */
1591b5df2d14SHong Zhang   b->barray       = 0;
1592b5df2d14SHong Zhang 
1593b5df2d14SHong Zhang   /* stuff used for matrix vector multiply */
1594b5df2d14SHong Zhang   b->lvec         = 0;
1595b5df2d14SHong Zhang   b->Mvctx        = 0;
1596b5df2d14SHong Zhang 
1597b5df2d14SHong Zhang   /* stuff for MatGetRow() */
1598b5df2d14SHong Zhang   b->rowindices   = 0;
1599b5df2d14SHong Zhang   b->rowvalues    = 0;
1600b5df2d14SHong Zhang   b->getrowactive = PETSC_FALSE;
1601b5df2d14SHong Zhang 
1602b5df2d14SHong Zhang   /* hash table stuff */
1603b5df2d14SHong Zhang   b->ht           = 0;
1604b5df2d14SHong Zhang   b->hd           = 0;
1605b5df2d14SHong Zhang   b->ht_size      = 0;
1606b5df2d14SHong Zhang   b->ht_flag      = PETSC_FALSE;
1607b5df2d14SHong Zhang   b->ht_fact      = 0;
1608b5df2d14SHong Zhang   b->ht_total_ct  = 0;
1609b5df2d14SHong Zhang   b->ht_insert_ct = 0;
1610b5df2d14SHong Zhang 
1611b0a32e0cSBarry Smith   ierr = PetscOptionsHasName(PETSC_NULL,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
1612b5df2d14SHong Zhang   if (flg) {
1613b5df2d14SHong Zhang     double fact = 1.39;
1614b5df2d14SHong Zhang     ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
1615b0a32e0cSBarry Smith     ierr = PetscOptionsGetDouble(PETSC_NULL,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
1616b5df2d14SHong Zhang     if (fact <= 1.0) fact = 1.39;
1617b5df2d14SHong Zhang     ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
1618b0a32e0cSBarry Smith     PetscLogInfo(0,"MatCreateMPISBAIJ:Hash table Factor used %5.2f\n",fact);
1619b5df2d14SHong Zhang   }
1620b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
1621b5df2d14SHong Zhang                                      "MatStoreValues_MPISBAIJ",
1622b5df2d14SHong Zhang                                      MatStoreValues_MPISBAIJ);CHKERRQ(ierr);
1623b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
1624b5df2d14SHong Zhang                                      "MatRetrieveValues_MPISBAIJ",
1625b5df2d14SHong Zhang                                      MatRetrieveValues_MPISBAIJ);CHKERRQ(ierr);
1626b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
1627b5df2d14SHong Zhang                                      "MatGetDiagonalBlock_MPISBAIJ",
1628b5df2d14SHong Zhang                                      MatGetDiagonalBlock_MPISBAIJ);CHKERRQ(ierr);
1629b5df2d14SHong Zhang   PetscFunctionReturn(0);
1630b5df2d14SHong Zhang }
1631273d9f13SBarry Smith EXTERN_C_END
1632b5df2d14SHong Zhang 
16334a2ae208SSatish Balay #undef __FUNCT__
16344a2ae208SSatish Balay #define __FUNCT__ "MatMPISBAIJSetPreallocation"
1635b5df2d14SHong Zhang /*@C
1636b5df2d14SHong Zhang    MatMPISBAIJSetPreallocation - For good matrix assembly performance
1637b5df2d14SHong Zhang    the user should preallocate the matrix storage by setting the parameters
1638b5df2d14SHong Zhang    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1639b5df2d14SHong Zhang    performance can be increased by more than a factor of 50.
1640b5df2d14SHong Zhang 
1641b5df2d14SHong Zhang    Collective on Mat
1642b5df2d14SHong Zhang 
1643b5df2d14SHong Zhang    Input Parameters:
1644b5df2d14SHong Zhang +  A - the matrix
1645b5df2d14SHong Zhang .  bs   - size of blockk
1646b5df2d14SHong Zhang .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1647b5df2d14SHong Zhang            submatrix  (same for all local rows)
1648b5df2d14SHong Zhang .  d_nnz - array containing the number of block nonzeros in the various block rows
1649b5df2d14SHong Zhang            of the in diagonal portion of the local (possibly different for each block
1650b5df2d14SHong Zhang            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1651b5df2d14SHong Zhang .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1652b5df2d14SHong Zhang            submatrix (same for all local rows).
1653b5df2d14SHong Zhang -  o_nnz - array containing the number of nonzeros in the various block rows of the
1654b5df2d14SHong Zhang            off-diagonal portion of the local submatrix (possibly different for
1655b5df2d14SHong Zhang            each block row) or PETSC_NULL.
1656b5df2d14SHong Zhang 
1657b5df2d14SHong Zhang 
1658b5df2d14SHong Zhang    Options Database Keys:
1659b5df2d14SHong Zhang .   -mat_no_unroll - uses code that does not unroll the loops in the
1660b5df2d14SHong Zhang                      block calculations (much slower)
1661b5df2d14SHong Zhang .   -mat_block_size - size of the blocks to use
1662b5df2d14SHong Zhang 
1663b5df2d14SHong Zhang    Notes:
1664b5df2d14SHong Zhang 
1665b5df2d14SHong Zhang    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1666b5df2d14SHong Zhang    than it must be used on all processors that share the object for that argument.
1667b5df2d14SHong Zhang 
1668b5df2d14SHong Zhang    Storage Information:
1669b5df2d14SHong Zhang    For a square global matrix we define each processor's diagonal portion
1670b5df2d14SHong Zhang    to be its local rows and the corresponding columns (a square submatrix);
1671b5df2d14SHong Zhang    each processor's off-diagonal portion encompasses the remainder of the
1672b5df2d14SHong Zhang    local matrix (a rectangular submatrix).
1673b5df2d14SHong Zhang 
1674b5df2d14SHong Zhang    The user can specify preallocated storage for the diagonal part of
1675b5df2d14SHong Zhang    the local submatrix with either d_nz or d_nnz (not both).  Set
1676b5df2d14SHong Zhang    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1677b5df2d14SHong Zhang    memory allocation.  Likewise, specify preallocated storage for the
1678b5df2d14SHong Zhang    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1679b5df2d14SHong Zhang 
1680b5df2d14SHong Zhang    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1681b5df2d14SHong Zhang    the figure below we depict these three local rows and all columns (0-11).
1682b5df2d14SHong Zhang 
1683b5df2d14SHong Zhang .vb
1684b5df2d14SHong Zhang            0 1 2 3 4 5 6 7 8 9 10 11
1685b5df2d14SHong Zhang           -------------------
1686b5df2d14SHong Zhang    row 3  |  o o o d d d o o o o o o
1687b5df2d14SHong Zhang    row 4  |  o o o d d d o o o o o o
1688b5df2d14SHong Zhang    row 5  |  o o o d d d o o o o o o
1689b5df2d14SHong Zhang           -------------------
1690b5df2d14SHong Zhang .ve
1691b5df2d14SHong Zhang 
1692b5df2d14SHong Zhang    Thus, any entries in the d locations are stored in the d (diagonal)
1693b5df2d14SHong Zhang    submatrix, and any entries in the o locations are stored in the
1694b5df2d14SHong Zhang    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1695b5df2d14SHong Zhang    stored simply in the MATSEQBAIJ format for compressed row storage.
1696b5df2d14SHong Zhang 
1697b5df2d14SHong Zhang    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1698b5df2d14SHong Zhang    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1699b5df2d14SHong Zhang    In general, for PDE problems in which most nonzeros are near the diagonal,
1700b5df2d14SHong Zhang    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1701b5df2d14SHong Zhang    or you will get TERRIBLE performance; see the users' manual chapter on
1702b5df2d14SHong Zhang    matrices.
1703b5df2d14SHong Zhang 
1704b5df2d14SHong Zhang    Level: intermediate
1705b5df2d14SHong Zhang 
1706b5df2d14SHong Zhang .keywords: matrix, block, aij, compressed row, sparse, parallel
1707b5df2d14SHong Zhang 
1708b5df2d14SHong Zhang .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1709b5df2d14SHong Zhang @*/
1710b5df2d14SHong Zhang 
1711b5df2d14SHong Zhang int MatMPISBAIJSetPreallocation(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz)
1712b5df2d14SHong Zhang {
1713b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1714eb7adc28SSatish Balay   int          ierr,i,mbs,Mbs;
1715273d9f13SBarry Smith   PetscTruth   flg2;
1716b5df2d14SHong Zhang 
1717b5df2d14SHong Zhang   PetscFunctionBegin;
1718273d9f13SBarry Smith   ierr = PetscTypeCompare((PetscObject)B,MATMPISBAIJ,&flg2);CHKERRQ(ierr);
1719273d9f13SBarry Smith   if (!flg2) PetscFunctionReturn(0);
1720273d9f13SBarry Smith 
1721b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1722b5df2d14SHong Zhang 
1723b5df2d14SHong Zhang   if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
1724435da068SBarry Smith   if (d_nz == PETSC_DECIDE || d_nz == PETSC_DEFAULT) d_nz = 3;
1725435da068SBarry Smith   if (o_nz == PETSC_DECIDE || o_nz == PETSC_DEFAULT) o_nz = 1;
1726435da068SBarry Smith   if (d_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than 0: value %d",d_nz);
1727435da068SBarry Smith   if (o_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than 0: value %d",o_nz);
1728b5df2d14SHong Zhang   if (d_nnz) {
1729b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1730b5df2d14SHong Zhang       if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %d value %d",i,d_nnz[i]);
1731b5df2d14SHong Zhang     }
1732b5df2d14SHong Zhang   }
1733b5df2d14SHong Zhang   if (o_nnz) {
1734b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1735b5df2d14SHong Zhang       if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %d value %d",i,o_nnz[i]);
1736b5df2d14SHong Zhang     }
1737b5df2d14SHong Zhang   }
173819138431SHong Zhang   B->preallocated = PETSC_TRUE;
173919138431SHong Zhang   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->m,&B->M);CHKERRQ(ierr);
174019138431SHong Zhang   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->n,&B->N);CHKERRQ(ierr);
174119138431SHong Zhang   ierr = MapCreateMPI(B->comm,B->m,B->M,&B->rmap);CHKERRQ(ierr);
174219138431SHong Zhang   ierr = MapCreateMPI(B->comm,B->m,B->M,&B->cmap);CHKERRQ(ierr);
1743b5df2d14SHong Zhang 
1744b5df2d14SHong Zhang   b   = (Mat_MPISBAIJ*)B->data;
1745b5df2d14SHong Zhang   mbs = B->m/bs;
1746b5df2d14SHong Zhang   Mbs = B->M/bs;
1747b5df2d14SHong Zhang   if (mbs*bs != B->m) {
174819138431SHong Zhang     SETERRQ2(PETSC_ERR_ARG_SIZ,"No of local rows %d must be divisible by blocksize %d",B->m,bs);
1749b5df2d14SHong Zhang   }
1750b5df2d14SHong Zhang 
1751b5df2d14SHong Zhang   b->bs  = bs;
1752b5df2d14SHong Zhang   b->bs2 = bs*bs;
1753b5df2d14SHong Zhang   b->mbs = mbs;
1754b5df2d14SHong Zhang   b->nbs = mbs;
1755b5df2d14SHong Zhang   b->Mbs = Mbs;
1756b5df2d14SHong Zhang   b->Nbs = Mbs;
1757b5df2d14SHong Zhang 
1758b5df2d14SHong Zhang   ierr = MPI_Allgather(&b->mbs,1,MPI_INT,b->rowners+1,1,MPI_INT,B->comm);CHKERRQ(ierr);
1759b5df2d14SHong Zhang   b->rowners[0]    = 0;
1760b5df2d14SHong Zhang   for (i=2; i<=b->size; i++) {
1761b5df2d14SHong Zhang     b->rowners[i] += b->rowners[i-1];
1762b5df2d14SHong Zhang   }
1763b5df2d14SHong Zhang   b->rstart    = b->rowners[b->rank];
1764b5df2d14SHong Zhang   b->rend      = b->rowners[b->rank+1];
1765b5df2d14SHong Zhang   b->cstart    = b->rstart;
1766b5df2d14SHong Zhang   b->cend      = b->rend;
1767b5df2d14SHong Zhang   for (i=0; i<=b->size; i++) {
1768b5df2d14SHong Zhang     b->rowners_bs[i] = b->rowners[i]*bs;
1769b5df2d14SHong Zhang   }
1770b5df2d14SHong Zhang   b->rstart_bs = b-> rstart*bs;
1771b5df2d14SHong Zhang   b->rend_bs   = b->rend*bs;
1772b5df2d14SHong Zhang 
1773b5df2d14SHong Zhang   b->cstart_bs = b->cstart*bs;
1774b5df2d14SHong Zhang   b->cend_bs   = b->cend*bs;
1775b5df2d14SHong Zhang 
1776b5df2d14SHong Zhang 
1777b5df2d14SHong Zhang   ierr = MatCreateSeqSBAIJ(PETSC_COMM_SELF,bs,B->m,B->m,d_nz,d_nnz,&b->A);CHKERRQ(ierr);
1778b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->A);
1779b5df2d14SHong Zhang   ierr = MatCreateSeqBAIJ(PETSC_COMM_SELF,bs,B->m,B->M,o_nz,o_nnz,&b->B);CHKERRQ(ierr);
1780b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->B);
1781b5df2d14SHong Zhang 
1782b5df2d14SHong Zhang   /* build cache for off array entries formed */
1783b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);
1784b5df2d14SHong Zhang 
1785b5df2d14SHong Zhang   PetscFunctionReturn(0);
1786b5df2d14SHong Zhang }
1787b5df2d14SHong Zhang 
17884a2ae208SSatish Balay #undef __FUNCT__
17894a2ae208SSatish Balay #define __FUNCT__ "MatCreateMPISBAIJ"
1790a30f8f8cSSatish Balay /*@C
1791a30f8f8cSSatish Balay    MatCreateMPISBAIJ - Creates a sparse parallel matrix in symmetric block AIJ format
1792a30f8f8cSSatish Balay    (block compressed row).  For good matrix assembly performance
1793a30f8f8cSSatish Balay    the user should preallocate the matrix storage by setting the parameters
1794a30f8f8cSSatish Balay    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1795a30f8f8cSSatish Balay    performance can be increased by more than a factor of 50.
1796a30f8f8cSSatish Balay 
1797a30f8f8cSSatish Balay    Collective on MPI_Comm
1798a30f8f8cSSatish Balay 
1799a30f8f8cSSatish Balay    Input Parameters:
1800a30f8f8cSSatish Balay +  comm - MPI communicator
1801a30f8f8cSSatish Balay .  bs   - size of blockk
1802a30f8f8cSSatish Balay .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
1803a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1804a30f8f8cSSatish Balay            y vector for the matrix-vector product y = Ax.
1805a30f8f8cSSatish Balay .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
1806a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1807a30f8f8cSSatish Balay            x vector for the matrix-vector product y = Ax.
1808a30f8f8cSSatish Balay .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
1809a30f8f8cSSatish Balay .  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
1810a30f8f8cSSatish Balay .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1811a30f8f8cSSatish Balay            submatrix  (same for all local rows)
1812a30f8f8cSSatish Balay .  d_nnz - array containing the number of block nonzeros in the various block rows
1813a30f8f8cSSatish Balay            of the in diagonal portion of the local (possibly different for each block
1814a30f8f8cSSatish Balay            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1815a30f8f8cSSatish Balay .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1816a30f8f8cSSatish Balay            submatrix (same for all local rows).
1817a30f8f8cSSatish Balay -  o_nnz - array containing the number of nonzeros in the various block rows of the
1818a30f8f8cSSatish Balay            off-diagonal portion of the local submatrix (possibly different for
1819a30f8f8cSSatish Balay            each block row) or PETSC_NULL.
1820a30f8f8cSSatish Balay 
1821a30f8f8cSSatish Balay    Output Parameter:
1822a30f8f8cSSatish Balay .  A - the matrix
1823a30f8f8cSSatish Balay 
1824a30f8f8cSSatish Balay    Options Database Keys:
1825a30f8f8cSSatish Balay .   -mat_no_unroll - uses code that does not unroll the loops in the
1826a30f8f8cSSatish Balay                      block calculations (much slower)
1827a30f8f8cSSatish Balay .   -mat_block_size - size of the blocks to use
1828a30f8f8cSSatish Balay .   -mat_mpi - use the parallel matrix data structures even on one processor
1829a30f8f8cSSatish Balay                (defaults to using SeqBAIJ format on one processor)
1830a30f8f8cSSatish Balay 
1831a30f8f8cSSatish Balay    Notes:
1832a30f8f8cSSatish Balay    The user MUST specify either the local or global matrix dimensions
1833a30f8f8cSSatish Balay    (possibly both).
1834a30f8f8cSSatish Balay 
1835a30f8f8cSSatish Balay    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1836a30f8f8cSSatish Balay    than it must be used on all processors that share the object for that argument.
1837a30f8f8cSSatish Balay 
1838a30f8f8cSSatish Balay    Storage Information:
1839a30f8f8cSSatish Balay    For a square global matrix we define each processor's diagonal portion
1840a30f8f8cSSatish Balay    to be its local rows and the corresponding columns (a square submatrix);
1841a30f8f8cSSatish Balay    each processor's off-diagonal portion encompasses the remainder of the
1842a30f8f8cSSatish Balay    local matrix (a rectangular submatrix).
1843a30f8f8cSSatish Balay 
1844a30f8f8cSSatish Balay    The user can specify preallocated storage for the diagonal part of
1845a30f8f8cSSatish Balay    the local submatrix with either d_nz or d_nnz (not both).  Set
1846a30f8f8cSSatish Balay    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1847a30f8f8cSSatish Balay    memory allocation.  Likewise, specify preallocated storage for the
1848a30f8f8cSSatish Balay    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1849a30f8f8cSSatish Balay 
1850a30f8f8cSSatish Balay    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1851a30f8f8cSSatish Balay    the figure below we depict these three local rows and all columns (0-11).
1852a30f8f8cSSatish Balay 
1853a30f8f8cSSatish Balay .vb
1854a30f8f8cSSatish Balay            0 1 2 3 4 5 6 7 8 9 10 11
1855a30f8f8cSSatish Balay           -------------------
1856a30f8f8cSSatish Balay    row 3  |  o o o d d d o o o o o o
1857a30f8f8cSSatish Balay    row 4  |  o o o d d d o o o o o o
1858a30f8f8cSSatish Balay    row 5  |  o o o d d d o o o o o o
1859a30f8f8cSSatish Balay           -------------------
1860a30f8f8cSSatish Balay .ve
1861a30f8f8cSSatish Balay 
1862a30f8f8cSSatish Balay    Thus, any entries in the d locations are stored in the d (diagonal)
1863a30f8f8cSSatish Balay    submatrix, and any entries in the o locations are stored in the
1864a30f8f8cSSatish Balay    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1865a30f8f8cSSatish Balay    stored simply in the MATSEQBAIJ format for compressed row storage.
1866a30f8f8cSSatish Balay 
1867a30f8f8cSSatish Balay    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1868a30f8f8cSSatish Balay    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1869a30f8f8cSSatish Balay    In general, for PDE problems in which most nonzeros are near the diagonal,
1870a30f8f8cSSatish Balay    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1871a30f8f8cSSatish Balay    or you will get TERRIBLE performance; see the users' manual chapter on
1872a30f8f8cSSatish Balay    matrices.
1873a30f8f8cSSatish Balay 
1874a30f8f8cSSatish Balay    Level: intermediate
1875a30f8f8cSSatish Balay 
1876a30f8f8cSSatish Balay .keywords: matrix, block, aij, compressed row, sparse, parallel
1877a30f8f8cSSatish Balay 
1878a209d233SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1879a30f8f8cSSatish Balay @*/
1880a30f8f8cSSatish Balay 
1881a30f8f8cSSatish Balay int MatCreateMPISBAIJ(MPI_Comm comm,int bs,int m,int n,int M,int N,int d_nz,int *d_nnz,int o_nz,int *o_nnz,Mat *A)
1882a30f8f8cSSatish Balay {
1883273d9f13SBarry Smith   int ierr,size;
1884a30f8f8cSSatish Balay 
1885a30f8f8cSSatish Balay   PetscFunctionBegin;
1886b5df2d14SHong Zhang   ierr = MatCreate(comm,m,n,M,N,A);CHKERRQ(ierr);
1887273d9f13SBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1888273d9f13SBarry Smith   if (size > 1) {
1889b5df2d14SHong Zhang     ierr = MatSetType(*A,MATMPISBAIJ);CHKERRQ(ierr);
1890b5df2d14SHong Zhang     ierr = MatMPISBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
1891273d9f13SBarry Smith   } else {
1892273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQSBAIJ);CHKERRQ(ierr);
1893273d9f13SBarry Smith     ierr = MatSeqSBAIJSetPreallocation(*A,bs,d_nz,d_nnz);CHKERRQ(ierr);
1894273d9f13SBarry Smith   }
1895a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1896a30f8f8cSSatish Balay }
1897a30f8f8cSSatish Balay 
1898a30f8f8cSSatish Balay 
18994a2ae208SSatish Balay #undef __FUNCT__
19004a2ae208SSatish Balay #define __FUNCT__ "MatDuplicate_MPISBAIJ"
1901a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
1902a30f8f8cSSatish Balay {
1903a30f8f8cSSatish Balay   Mat          mat;
1904a30f8f8cSSatish Balay   Mat_MPISBAIJ *a,*oldmat = (Mat_MPISBAIJ*)matin->data;
1905a30f8f8cSSatish Balay   int          ierr,len=0;
1906a30f8f8cSSatish Balay 
1907a30f8f8cSSatish Balay   PetscFunctionBegin;
1908a30f8f8cSSatish Balay   *newmat       = 0;
1909b5df2d14SHong Zhang   ierr = MatCreate(matin->comm,matin->m,matin->n,matin->M,matin->N,&mat);CHKERRQ(ierr);
1910b5df2d14SHong Zhang   ierr = MatSetType(mat,MATMPISBAIJ);CHKERRQ(ierr);
1911273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
1912b5df2d14SHong Zhang   a = (Mat_MPISBAIJ*)mat->data;
1913a30f8f8cSSatish Balay   a->bs  = oldmat->bs;
1914a30f8f8cSSatish Balay   a->bs2 = oldmat->bs2;
1915a30f8f8cSSatish Balay   a->mbs = oldmat->mbs;
1916a30f8f8cSSatish Balay   a->nbs = oldmat->nbs;
1917a30f8f8cSSatish Balay   a->Mbs = oldmat->Mbs;
1918a30f8f8cSSatish Balay   a->Nbs = oldmat->Nbs;
1919a30f8f8cSSatish Balay 
1920a30f8f8cSSatish Balay   a->rstart       = oldmat->rstart;
1921a30f8f8cSSatish Balay   a->rend         = oldmat->rend;
1922a30f8f8cSSatish Balay   a->cstart       = oldmat->cstart;
1923a30f8f8cSSatish Balay   a->cend         = oldmat->cend;
1924a30f8f8cSSatish Balay   a->size         = oldmat->size;
1925a30f8f8cSSatish Balay   a->rank         = oldmat->rank;
1926a30f8f8cSSatish Balay   a->donotstash   = oldmat->donotstash;
1927a30f8f8cSSatish Balay   a->roworiented  = oldmat->roworiented;
1928a30f8f8cSSatish Balay   a->rowindices   = 0;
1929a30f8f8cSSatish Balay   a->rowvalues    = 0;
1930a30f8f8cSSatish Balay   a->getrowactive = PETSC_FALSE;
1931a30f8f8cSSatish Balay   a->barray       = 0;
1932a30f8f8cSSatish Balay   a->rstart_bs    = oldmat->rstart_bs;
1933a30f8f8cSSatish Balay   a->rend_bs      = oldmat->rend_bs;
1934a30f8f8cSSatish Balay   a->cstart_bs    = oldmat->cstart_bs;
1935a30f8f8cSSatish Balay   a->cend_bs      = oldmat->cend_bs;
1936a30f8f8cSSatish Balay 
1937a30f8f8cSSatish Balay   /* hash table stuff */
1938a30f8f8cSSatish Balay   a->ht           = 0;
1939a30f8f8cSSatish Balay   a->hd           = 0;
1940a30f8f8cSSatish Balay   a->ht_size      = 0;
1941a30f8f8cSSatish Balay   a->ht_flag      = oldmat->ht_flag;
1942a30f8f8cSSatish Balay   a->ht_fact      = oldmat->ht_fact;
1943a30f8f8cSSatish Balay   a->ht_total_ct  = 0;
1944a30f8f8cSSatish Balay   a->ht_insert_ct = 0;
1945a30f8f8cSSatish Balay 
194682502324SSatish Balay   ierr = PetscMalloc(3*(a->size+2)*sizeof(int),&a->rowners);CHKERRQ(ierr);
1947b0a32e0cSBarry Smith   PetscLogObjectMemory(mat,3*(a->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1948a30f8f8cSSatish Balay   a->cowners    = a->rowners + a->size + 2;
1949a30f8f8cSSatish Balay   a->rowners_bs = a->cowners + a->size + 2;
1950a30f8f8cSSatish Balay   ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(int));CHKERRQ(ierr);
1951a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
1952a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,oldmat->bs,&mat->bstash);CHKERRQ(ierr);
1953a30f8f8cSSatish Balay   if (oldmat->colmap) {
1954a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
1955a30f8f8cSSatish Balay     ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
1956a30f8f8cSSatish Balay #else
195782502324SSatish Balay     ierr = PetscMalloc((a->Nbs)*sizeof(int),&a->colmap);CHKERRQ(ierr);
1958b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,(a->Nbs)*sizeof(int));
1959a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(int));CHKERRQ(ierr);
1960a30f8f8cSSatish Balay #endif
1961a30f8f8cSSatish Balay   } else a->colmap = 0;
1962a30f8f8cSSatish Balay   if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
196382502324SSatish Balay     ierr = PetscMalloc(len*sizeof(int),&a->garray);CHKERRQ(ierr);
1964b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,len*sizeof(int));
1965a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));CHKERRQ(ierr);
1966a30f8f8cSSatish Balay   } else a->garray = 0;
1967a30f8f8cSSatish Balay 
1968a30f8f8cSSatish Balay   ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
1969b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->lvec);
1970a30f8f8cSSatish Balay   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
1971a30f8f8cSSatish Balay 
1972b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->Mvctx);
1973a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
1974b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->A);
1975a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
1976b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->B);
1977b0a32e0cSBarry Smith   ierr = PetscFListDuplicate(mat->qlist,&matin->qlist);CHKERRQ(ierr);
1978a30f8f8cSSatish Balay   *newmat = mat;
1979a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1980a30f8f8cSSatish Balay }
1981a30f8f8cSSatish Balay 
1982a30f8f8cSSatish Balay #include "petscsys.h"
1983a30f8f8cSSatish Balay 
1984273d9f13SBarry Smith EXTERN_C_BEGIN
19854a2ae208SSatish Balay #undef __FUNCT__
19864a2ae208SSatish Balay #define __FUNCT__ "MatLoad_MPISBAIJ"
1987b0a32e0cSBarry Smith int MatLoad_MPISBAIJ(PetscViewer viewer,MatType type,Mat *newmat)
1988a30f8f8cSSatish Balay {
1989a30f8f8cSSatish Balay   Mat          A;
1990a30f8f8cSSatish Balay   int          i,nz,ierr,j,rstart,rend,fd;
1991a30f8f8cSSatish Balay   Scalar       *vals,*buf;
1992a30f8f8cSSatish Balay   MPI_Comm     comm = ((PetscObject)viewer)->comm;
1993a30f8f8cSSatish Balay   MPI_Status   status;
1994a30f8f8cSSatish Balay   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,*browners,maxnz,*cols;
1995a30f8f8cSSatish Balay   int          *locrowlens,*sndcounts = 0,*procsnz = 0,jj,*mycols,*ibuf;
1996a30f8f8cSSatish Balay   int          tag = ((PetscObject)viewer)->tag,bs=1,Mbs,mbs,extra_rows;
1997a30f8f8cSSatish Balay   int          *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
1998a30f8f8cSSatish Balay   int          dcount,kmax,k,nzcount,tmp;
1999a30f8f8cSSatish Balay 
2000a30f8f8cSSatish Balay   PetscFunctionBegin;
2001b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
2002a30f8f8cSSatish Balay 
2003a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2004a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
2005a30f8f8cSSatish Balay   if (!rank) {
2006b0a32e0cSBarry Smith     ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
2007a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
200829bbc08cSBarry Smith     if (header[0] != MAT_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
2009a30f8f8cSSatish Balay     if (header[3] < 0) {
201029bbc08cSBarry Smith       SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format, cannot load as MPISBAIJ");
2011a30f8f8cSSatish Balay     }
2012a30f8f8cSSatish Balay   }
2013a30f8f8cSSatish Balay 
2014a30f8f8cSSatish Balay   ierr = MPI_Bcast(header+1,3,MPI_INT,0,comm);CHKERRQ(ierr);
2015a30f8f8cSSatish Balay   M = header[1]; N = header[2];
2016a30f8f8cSSatish Balay 
201729bbc08cSBarry Smith   if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");
2018a30f8f8cSSatish Balay 
2019a30f8f8cSSatish Balay   /*
2020a30f8f8cSSatish Balay      This code adds extra rows to make sure the number of rows is
2021a30f8f8cSSatish Balay      divisible by the blocksize
2022a30f8f8cSSatish Balay   */
2023a30f8f8cSSatish Balay   Mbs        = M/bs;
2024a30f8f8cSSatish Balay   extra_rows = bs - M + bs*(Mbs);
2025a30f8f8cSSatish Balay   if (extra_rows == bs) extra_rows = 0;
2026a30f8f8cSSatish Balay   else                  Mbs++;
2027a30f8f8cSSatish Balay   if (extra_rows &&!rank) {
2028b0a32e0cSBarry Smith     PetscLogInfo(0,"MatLoad_MPISBAIJ:Padding loaded matrix to match blocksize\n");
2029a30f8f8cSSatish Balay   }
2030a30f8f8cSSatish Balay 
2031a30f8f8cSSatish Balay   /* determine ownership of all rows */
2032a30f8f8cSSatish Balay   mbs        = Mbs/size + ((Mbs % size) > rank);
2033a30f8f8cSSatish Balay   m          = mbs*bs;
2034b0a32e0cSBarry Smith   ierr       = PetscMalloc(2*(size+2)*sizeof(int),&rowners);CHKERRQ(ierr);
2035a30f8f8cSSatish Balay   browners   = rowners + size + 1;
2036a30f8f8cSSatish Balay   ierr       = MPI_Allgather(&mbs,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
2037a30f8f8cSSatish Balay   rowners[0] = 0;
2038a30f8f8cSSatish Balay   for (i=2; i<=size; i++) rowners[i] += rowners[i-1];
2039a30f8f8cSSatish Balay   for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
2040a30f8f8cSSatish Balay   rstart = rowners[rank];
2041a30f8f8cSSatish Balay   rend   = rowners[rank+1];
2042a30f8f8cSSatish Balay 
2043a30f8f8cSSatish Balay   /* distribute row lengths to all processors */
204482502324SSatish Balay   ierr = PetscMalloc((rend-rstart)*bs*sizeof(int),&locrowlens);CHKERRQ(ierr);
2045a30f8f8cSSatish Balay   if (!rank) {
2046b0a32e0cSBarry Smith     ierr = PetscMalloc((M+extra_rows)*sizeof(int),&rowlengths);CHKERRQ(ierr);
2047a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
2048a30f8f8cSSatish Balay     for (i=0; i<extra_rows; i++) rowlengths[M+i] = 1;
204982502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&sndcounts);CHKERRQ(ierr);
2050a30f8f8cSSatish Balay     for (i=0; i<size; i++) sndcounts[i] = browners[i+1] - browners[i];
2051a30f8f8cSSatish Balay     ierr = MPI_Scatterv(rowlengths,sndcounts,browners,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2052a30f8f8cSSatish Balay     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
2053a30f8f8cSSatish Balay   } else {
2054a30f8f8cSSatish Balay     ierr = MPI_Scatterv(0,0,0,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2055a30f8f8cSSatish Balay   }
2056a30f8f8cSSatish Balay 
20570222edb1SHong Zhang   if (!rank) {   /* procs[0] */
2058a30f8f8cSSatish Balay     /* calculate the number of nonzeros on each processor */
205982502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&procsnz);CHKERRQ(ierr);
2060a30f8f8cSSatish Balay     ierr = PetscMemzero(procsnz,size*sizeof(int));CHKERRQ(ierr);
2061a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2062a30f8f8cSSatish Balay       for (j=rowners[i]*bs; j< rowners[i+1]*bs; j++) {
2063a30f8f8cSSatish Balay         procsnz[i] += rowlengths[j];
2064a30f8f8cSSatish Balay       }
2065a30f8f8cSSatish Balay     }
2066a30f8f8cSSatish Balay     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
2067a30f8f8cSSatish Balay 
2068a30f8f8cSSatish Balay     /* determine max buffer needed and allocate it */
2069a30f8f8cSSatish Balay     maxnz = 0;
2070a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2071a30f8f8cSSatish Balay       maxnz = PetscMax(maxnz,procsnz[i]);
2072a30f8f8cSSatish Balay     }
207382502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(int),&cols);CHKERRQ(ierr);
2074a30f8f8cSSatish Balay 
2075a30f8f8cSSatish Balay     /* read in my part of the matrix column indices  */
2076a30f8f8cSSatish Balay     nz     = procsnz[0];
207782502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2078a30f8f8cSSatish Balay     mycols = ibuf;
2079a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2080a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
2081a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }
2082a30f8f8cSSatish Balay 
2083a30f8f8cSSatish Balay     /* read in every ones (except the last) and ship off */
2084a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2085a30f8f8cSSatish Balay       nz   = procsnz[i];
2086a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2087a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz,MPI_INT,i,tag,comm);CHKERRQ(ierr);
2088a30f8f8cSSatish Balay     }
2089a30f8f8cSSatish Balay     /* read in the stuff for the last proc */
2090a30f8f8cSSatish Balay     if (size != 1) {
2091a30f8f8cSSatish Balay       nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
2092a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2093a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
2094a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz+extra_rows,MPI_INT,size-1,tag,comm);CHKERRQ(ierr);
2095a30f8f8cSSatish Balay     }
2096a30f8f8cSSatish Balay     ierr = PetscFree(cols);CHKERRQ(ierr);
20970222edb1SHong Zhang   } else {  /* procs[i], i>0 */
2098a30f8f8cSSatish Balay     /* determine buffer space needed for message */
2099a30f8f8cSSatish Balay     nz = 0;
2100a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2101a30f8f8cSSatish Balay       nz += locrowlens[i];
2102a30f8f8cSSatish Balay     }
210382502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2104a30f8f8cSSatish Balay     mycols = ibuf;
2105a30f8f8cSSatish Balay     /* receive message of column indices*/
2106a30f8f8cSSatish Balay     ierr = MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);CHKERRQ(ierr);
2107a30f8f8cSSatish Balay     ierr = MPI_Get_count(&status,MPI_INT,&maxnz);CHKERRQ(ierr);
210829bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2109a30f8f8cSSatish Balay   }
2110a30f8f8cSSatish Balay 
2111a30f8f8cSSatish Balay   /* loop over local rows, determining number of off diagonal entries */
211282502324SSatish Balay   ierr     = PetscMalloc(2*(rend-rstart+1)*sizeof(int),&dlens);CHKERRQ(ierr);
2113a30f8f8cSSatish Balay   odlens   = dlens + (rend-rstart);
211482502324SSatish Balay   ierr     = PetscMalloc(3*Mbs*sizeof(int),&mask);CHKERRQ(ierr);
2115a30f8f8cSSatish Balay   ierr     = PetscMemzero(mask,3*Mbs*sizeof(int));CHKERRQ(ierr);
2116a30f8f8cSSatish Balay   masked1  = mask    + Mbs;
2117a30f8f8cSSatish Balay   masked2  = masked1 + Mbs;
2118a30f8f8cSSatish Balay   rowcount = 0; nzcount = 0;
2119a30f8f8cSSatish Balay   for (i=0; i<mbs; i++) {
2120a30f8f8cSSatish Balay     dcount  = 0;
2121a30f8f8cSSatish Balay     odcount = 0;
2122a30f8f8cSSatish Balay     for (j=0; j<bs; j++) {
2123a30f8f8cSSatish Balay       kmax = locrowlens[rowcount];
2124a30f8f8cSSatish Balay       for (k=0; k<kmax; k++) {
21250222edb1SHong Zhang         tmp = mycols[nzcount++]/bs; /* block col. index */
2126a30f8f8cSSatish Balay         if (!mask[tmp]) {
2127a30f8f8cSSatish Balay           mask[tmp] = 1;
21280222edb1SHong Zhang           if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp; /* entry in off-diag portion */
21290222edb1SHong Zhang           else masked1[dcount++] = tmp; /* entry in diag portion */
2130a30f8f8cSSatish Balay         }
2131a30f8f8cSSatish Balay       }
2132a30f8f8cSSatish Balay       rowcount++;
2133a30f8f8cSSatish Balay     }
2134a30f8f8cSSatish Balay 
21350222edb1SHong Zhang     dlens[i]  = dcount;  /* d_nzz[i] */
21360222edb1SHong Zhang     odlens[i] = odcount; /* o_nzz[i] */
2137a30f8f8cSSatish Balay 
2138a30f8f8cSSatish Balay     /* zero out the mask elements we set */
2139a30f8f8cSSatish Balay     for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
2140a30f8f8cSSatish Balay     for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
2141a30f8f8cSSatish Balay   }
2142a30f8f8cSSatish Balay 
2143a30f8f8cSSatish Balay   /* create our matrix */
21447e06b45fSHong Zhang   ierr = MatCreateMPISBAIJ(comm,bs,m,m,PETSC_DETERMINE,PETSC_DETERMINE,0,dlens,0,odlens,newmat);
2145bfe19f1aSHong Zhang   CHKERRQ(ierr);
2146a30f8f8cSSatish Balay   A = *newmat;
2147273d9f13SBarry Smith   ierr = MatSetOption(A,MAT_COLUMNS_SORTED);CHKERRQ(ierr);
2148a30f8f8cSSatish Balay 
2149a30f8f8cSSatish Balay   if (!rank) {
215082502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(Scalar),&buf);CHKERRQ(ierr);
2151a30f8f8cSSatish Balay     /* read in my part of the matrix numerical values  */
2152a30f8f8cSSatish Balay     nz = procsnz[0];
2153a30f8f8cSSatish Balay     vals = buf;
2154a30f8f8cSSatish Balay     mycols = ibuf;
2155a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2156a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2157a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }
2158a30f8f8cSSatish Balay 
2159a30f8f8cSSatish Balay     /* insert into matrix */
2160a30f8f8cSSatish Balay     jj      = rstart*bs;
2161a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
21627e06b45fSHong Zhang       ierr = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2163a30f8f8cSSatish Balay       mycols += locrowlens[i];
2164a30f8f8cSSatish Balay       vals   += locrowlens[i];
2165a30f8f8cSSatish Balay       jj++;
2166a30f8f8cSSatish Balay     }
21677e06b45fSHong Zhang 
2168a30f8f8cSSatish Balay     /* read in other processors (except the last one) and ship out */
2169a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2170a30f8f8cSSatish Balay       nz   = procsnz[i];
2171a30f8f8cSSatish Balay       vals = buf;
2172a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2173a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
2174a30f8f8cSSatish Balay     }
2175a30f8f8cSSatish Balay     /* the last proc */
2176a30f8f8cSSatish Balay     if (size != 1){
2177a30f8f8cSSatish Balay       nz   = procsnz[i] - extra_rows;
2178a30f8f8cSSatish Balay       vals = buf;
2179a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2180a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
2181a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
2182a30f8f8cSSatish Balay     }
2183a30f8f8cSSatish Balay     ierr = PetscFree(procsnz);CHKERRQ(ierr);
21847e06b45fSHong Zhang 
2185a30f8f8cSSatish Balay   } else {
2186a30f8f8cSSatish Balay     /* receive numeric values */
218782502324SSatish Balay     ierr = PetscMalloc(nz*sizeof(Scalar),&buf);CHKERRQ(ierr);
2188a30f8f8cSSatish Balay 
2189a30f8f8cSSatish Balay     /* receive message of values*/
2190a30f8f8cSSatish Balay     vals   = buf;
2191a30f8f8cSSatish Balay     mycols = ibuf;
2192a30f8f8cSSatish Balay     ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
2193a30f8f8cSSatish Balay     ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
219429bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2195a30f8f8cSSatish Balay 
2196a30f8f8cSSatish Balay     /* insert into matrix */
2197a30f8f8cSSatish Balay     jj      = rstart*bs;
2198a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2199a30f8f8cSSatish Balay       ierr    = MatSetValues_MPISBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2200a30f8f8cSSatish Balay       mycols += locrowlens[i];
2201a30f8f8cSSatish Balay       vals   += locrowlens[i];
2202a30f8f8cSSatish Balay       jj++;
2203a30f8f8cSSatish Balay     }
2204a30f8f8cSSatish Balay   }
22057e06b45fSHong Zhang 
2206a30f8f8cSSatish Balay   ierr = PetscFree(locrowlens);CHKERRQ(ierr);
2207a30f8f8cSSatish Balay   ierr = PetscFree(buf);CHKERRQ(ierr);
2208a30f8f8cSSatish Balay   ierr = PetscFree(ibuf);CHKERRQ(ierr);
2209a30f8f8cSSatish Balay   ierr = PetscFree(rowners);CHKERRQ(ierr);
2210a30f8f8cSSatish Balay   ierr = PetscFree(dlens);CHKERRQ(ierr);
2211a30f8f8cSSatish Balay   ierr = PetscFree(mask);CHKERRQ(ierr);
2212a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2213a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2214a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2215a30f8f8cSSatish Balay }
2216273d9f13SBarry Smith EXTERN_C_END
2217a30f8f8cSSatish Balay 
22184a2ae208SSatish Balay #undef __FUNCT__
22194a2ae208SSatish Balay #define __FUNCT__ "MatMPISBAIJSetHashTableFactor"
2220a30f8f8cSSatish Balay /*@
2221a30f8f8cSSatish Balay    MatMPISBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.
2222a30f8f8cSSatish Balay 
2223a30f8f8cSSatish Balay    Input Parameters:
2224a30f8f8cSSatish Balay .  mat  - the matrix
2225a30f8f8cSSatish Balay .  fact - factor
2226a30f8f8cSSatish Balay 
2227a30f8f8cSSatish Balay    Collective on Mat
2228a30f8f8cSSatish Balay 
2229a30f8f8cSSatish Balay    Level: advanced
2230a30f8f8cSSatish Balay 
2231a30f8f8cSSatish Balay   Notes:
2232a30f8f8cSSatish Balay    This can also be set by the command line option: -mat_use_hash_table fact
2233a30f8f8cSSatish Balay 
2234a30f8f8cSSatish Balay .keywords: matrix, hashtable, factor, HT
2235a30f8f8cSSatish Balay 
2236a30f8f8cSSatish Balay .seealso: MatSetOption()
2237a30f8f8cSSatish Balay @*/
2238a30f8f8cSSatish Balay int MatMPISBAIJSetHashTableFactor(Mat mat,PetscReal fact)
2239a30f8f8cSSatish Balay {
2240a30f8f8cSSatish Balay   PetscFunctionBegin;
224129bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
224296e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
2243a30f8f8cSSatish Balay }
224424d5174aSHong Zhang 
22454a2ae208SSatish Balay #undef __FUNCT__
22464a2ae208SSatish Balay #define __FUNCT__ "MatGetRowMax_MPISBAIJ"
224724d5174aSHong Zhang int MatGetRowMax_MPISBAIJ(Mat A,Vec v)
224824d5174aSHong Zhang {
224924d5174aSHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
2250f4c0e9e4SHong Zhang   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(a->B)->data;
2251ca54ac64SHong Zhang   PetscReal    atmp;
2252ca54ac64SHong Zhang   double       *work,*svalues,*rvalues;
2253ca54ac64SHong Zhang   int          ierr,i,bs,mbs,*bi,*bj,brow,j,ncols,krow,kcol,col,row,Mbs,bcol;
2254154bba0bSHong Zhang   int          rank,size,*rowners_bs,dest,count,source;
22558a1c53f2SBarry Smith   Scalar       *va;
22568a1c53f2SBarry Smith   MatScalar    *ba;
2257f4c0e9e4SHong Zhang   MPI_Status   stat;
225824d5174aSHong Zhang 
225924d5174aSHong Zhang   PetscFunctionBegin;
2260d36791b2SHong Zhang   ierr = MatGetRowMax(a->A,v);CHKERRQ(ierr);
2261f4c0e9e4SHong Zhang   ierr = VecGetArray(v,&va);CHKERRQ(ierr);
2262f4c0e9e4SHong Zhang 
2263ac355199SBarry Smith   ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
2264ac355199SBarry Smith   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
2265f4c0e9e4SHong Zhang 
2266f4c0e9e4SHong Zhang   bs   = a->bs;
2267f4c0e9e4SHong Zhang   mbs  = a->mbs;
2268f4c0e9e4SHong Zhang   Mbs  = a->Mbs;
2269f4c0e9e4SHong Zhang   ba   = b->a;
2270f4c0e9e4SHong Zhang   bi   = b->i;
2271f4c0e9e4SHong Zhang   bj   = b->j;
2272ca54ac64SHong Zhang   /*
2273f4c0e9e4SHong Zhang   PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] M: %d, bs: %d, mbs: %d \n",rank,bs*Mbs,bs,mbs);
2274f4c0e9e4SHong Zhang   PetscSynchronizedFlush(PETSC_COMM_WORLD);
2275ca54ac64SHong Zhang   */
2276f4c0e9e4SHong Zhang 
2277f4c0e9e4SHong Zhang   /* find ownerships */
2278f4c0e9e4SHong Zhang   rowners_bs = a->rowners_bs;
2279f4c0e9e4SHong Zhang   /*
228004d41228SHong Zhang   if (!rank){
228104d41228SHong Zhang     for (i=0; i<size+1; i++) PetscPrintf(PETSC_COMM_SELF," rowners_bs[%d]: %d\n",i,rowners_bs[i]);
2282f4c0e9e4SHong Zhang   }
2283f4c0e9e4SHong Zhang   */
2284f4c0e9e4SHong Zhang 
2285f4c0e9e4SHong Zhang   /* each proc creates an array to be distributed */
228682502324SSatish Balay   ierr = PetscMalloc(bs*Mbs*sizeof(PetscReal),&work);CHKERRQ(ierr);
2287ca54ac64SHong Zhang   ierr = PetscMemzero(work,bs*Mbs*sizeof(PetscReal));CHKERRQ(ierr);
2288f4c0e9e4SHong Zhang 
2289f4c0e9e4SHong Zhang   /* row_max for B */
2290b8475685SHong Zhang   if (rank != size-1){
2291f4c0e9e4SHong Zhang     for (i=0; i<mbs; i++) {
2292f4c0e9e4SHong Zhang       ncols = bi[1] - bi[0]; bi++;
2293f4c0e9e4SHong Zhang       brow  = bs*i;
2294f4c0e9e4SHong Zhang       for (j=0; j<ncols; j++){
2295f4c0e9e4SHong Zhang         bcol = bs*(*bj);
2296f4c0e9e4SHong Zhang         for (kcol=0; kcol<bs; kcol++){
2297ca54ac64SHong Zhang           col = bcol + kcol;                 /* local col index */
229804d41228SHong Zhang           col += rowners_bs[rank+1];      /* global col index */
2299ca54ac64SHong Zhang           /* PetscPrintf(PETSC_COMM_SELF,"[%d], col: %d\n",rank,col); */
2300f4c0e9e4SHong Zhang           for (krow=0; krow<bs; krow++){
2301f4c0e9e4SHong Zhang             atmp = PetscAbsScalar(*ba); ba++;
2302ca54ac64SHong Zhang             row = brow + krow;    /* local row index */
2303f4c0e9e4SHong Zhang             /* printf("val[%d,%d]: %g\n",row,col,atmp); */
2304ca54ac64SHong Zhang             if (PetscRealPart(va[row]) < atmp) va[row] = atmp;
2305f4c0e9e4SHong Zhang             if (work[col] < atmp) work[col] = atmp;
2306f4c0e9e4SHong Zhang           }
2307f4c0e9e4SHong Zhang         }
2308f4c0e9e4SHong Zhang         bj++;
2309f4c0e9e4SHong Zhang       }
2310f4c0e9e4SHong Zhang     }
231104d41228SHong Zhang     /*
231204d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d], work: ",rank);
231304d41228SHong Zhang       for (i=0; i<bs*Mbs; i++) PetscPrintf(PETSC_COMM_SELF,"%g ",work[i]);
231404d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d]: \n");
231504d41228SHong Zhang       */
2316f4c0e9e4SHong Zhang 
2317f4c0e9e4SHong Zhang     /* send values to its owners */
2318f4c0e9e4SHong Zhang     for (dest=rank+1; dest<size; dest++){
2319f4c0e9e4SHong Zhang       svalues = work + rowners_bs[dest];
2320ca54ac64SHong Zhang       count = rowners_bs[dest+1]-rowners_bs[dest];
2321273d9f13SBarry Smith       ierr = MPI_Send(svalues,count,MPI_DOUBLE,dest,rank,PETSC_COMM_WORLD);CHKERRQ(ierr);
2322ca54ac64SHong Zhang       /*
232304d41228SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] sends %d values to [%d]: %g, %g, %g, %g\n",rank,count,dest,svalues[0],svalues[1],svalues[2],svalues[3]);
2324f4c0e9e4SHong Zhang       PetscSynchronizedFlush(PETSC_COMM_WORLD);
2325ca54ac64SHong Zhang       */
2326ca54ac64SHong Zhang     }
2327f4c0e9e4SHong Zhang   }
2328f4c0e9e4SHong Zhang 
2329f4c0e9e4SHong Zhang   /* receive values */
2330ca54ac64SHong Zhang   if (rank){
2331f4c0e9e4SHong Zhang     rvalues = work;
2332ca54ac64SHong Zhang     count = rowners_bs[rank+1]-rowners_bs[rank];
2333f4c0e9e4SHong Zhang     for (source=0; source<rank; source++){
2334154bba0bSHong Zhang       ierr = MPI_Recv(rvalues,count,MPI_DOUBLE,MPI_ANY_SOURCE,MPI_ANY_TAG,PETSC_COMM_WORLD,&stat);CHKERRQ(ierr);
2335f4c0e9e4SHong Zhang       /* process values */
2336f4c0e9e4SHong Zhang       for (i=0; i<count; i++){
2337ca54ac64SHong Zhang         if (PetscRealPart(va[i]) < rvalues[i]) va[i] = rvalues[i];
2338f4c0e9e4SHong Zhang       }
2339ca54ac64SHong Zhang       /*
234004d41228SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] received %d values from [%d]: %g, %g, %g, %g \n",rank,count,stat.MPI_SOURCE,rvalues[0],rvalues[1],rvalues[2],rvalues[3]);
2341f4c0e9e4SHong Zhang       PetscSynchronizedFlush(PETSC_COMM_WORLD);
2342ca54ac64SHong Zhang       */
2343f4c0e9e4SHong Zhang     }
2344ca54ac64SHong Zhang   }
2345f4c0e9e4SHong Zhang 
2346f4c0e9e4SHong Zhang   ierr = VecRestoreArray(v,&va);CHKERRQ(ierr);
2347ac355199SBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
234824d5174aSHong Zhang   PetscFunctionReturn(0);
234924d5174aSHong Zhang }
2350