xref: /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c (revision f204ca49f059977577f8ff3e841e7b73f69ef32d)
173f4d377SMatthew Knepley /*$Id: mpisbaij.c,v 1.61 2001/08/10 03:31:37 bsmith Exp $*/
2a30f8f8cSSatish Balay 
3c8117e22SSatish Balay #include "src/mat/impls/baij/mpi/mpibaij.h"    /*I "petscmat.h" I*/
4a30f8f8cSSatish Balay #include "mpisbaij.h"
5a30f8f8cSSatish Balay #include "src/mat/impls/sbaij/seq/sbaij.h"
6a30f8f8cSSatish Balay 
7a30f8f8cSSatish Balay extern int MatSetUpMultiply_MPISBAIJ(Mat);
840781036SHong Zhang extern int MatSetUpMultiply_MPISBAIJ_2comm(Mat);
9a30f8f8cSSatish Balay extern int DisAssemble_MPISBAIJ(Mat);
10d94109b8SHong Zhang extern int MatIncreaseOverlap_MPISBAIJ(Mat,int,IS[],int);
11f15d580aSBarry Smith extern int MatGetValues_SeqSBAIJ(Mat,int,const int[],int,const int[],PetscScalar []);
12e249d750SSatish Balay extern int MatGetValues_SeqBAIJ(Mat,int,const int[],int,const int[],PetscScalar []);
13f15d580aSBarry Smith extern int MatSetValues_SeqSBAIJ(Mat,int,const int [],int,const int [],const PetscScalar [],InsertMode);
14f15d580aSBarry Smith extern int MatSetValuesBlocked_SeqSBAIJ(Mat,int,const int[],int,const int[],const PetscScalar[],InsertMode);
15e249d750SSatish Balay extern int MatSetValuesBlocked_SeqBAIJ(Mat,int,const int[],int,const int[],const PetscScalar[],InsertMode);
1687828ca2SBarry Smith extern int MatGetRow_SeqSBAIJ(Mat,int,int*,int**,PetscScalar**);
1787828ca2SBarry Smith extern int MatRestoreRow_SeqSBAIJ(Mat,int,int*,int**,PetscScalar**);
18a30f8f8cSSatish Balay extern int MatPrintHelp_SeqSBAIJ(Mat);
1987828ca2SBarry Smith extern int MatZeroRows_SeqSBAIJ(Mat,IS,PetscScalar*);
2087828ca2SBarry Smith extern int MatZeroRows_SeqBAIJ(Mat,IS,PetscScalar *);
21d0566740SHong Zhang extern int MatGetRowMax_MPISBAIJ(Mat,Vec);
22c14dc6b6SHong Zhang extern int MatRelax_MPISBAIJ(Mat,Vec,PetscReal,MatSORType,PetscReal,int,int,Vec);
23a30f8f8cSSatish Balay 
24a30f8f8cSSatish Balay /*  UGLY, ugly, ugly
2587828ca2SBarry Smith    When MatScalar == PetscScalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
26a30f8f8cSSatish Balay    not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
27a30f8f8cSSatish Balay    inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
28a30f8f8cSSatish Balay    converts the entries into single precision and then calls ..._MatScalar() to put them
29a30f8f8cSSatish Balay    into the single precision data structures.
30a30f8f8cSSatish Balay */
31a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
32f15d580aSBarry Smith extern int MatSetValuesBlocked_SeqSBAIJ_MatScalar(Mat,int,const int[],int,const int[],const MatScalar[],InsertMode);
33f15d580aSBarry Smith extern int MatSetValues_MPISBAIJ_MatScalar(Mat,int,const int[],int,const int[],const MatScalar[],InsertMode);
34f15d580aSBarry Smith extern int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat,int,const int[],int,const int[],const MatScalar[],InsertMode);
35f15d580aSBarry Smith extern int MatSetValues_MPISBAIJ_HT_MatScalar(Mat,int,const int[],int,const int[],const MatScalar[],InsertMode);
36f15d580aSBarry Smith extern int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat,int,const int[],int,const int[],const MatScalar[],InsertMode);
37a30f8f8cSSatish Balay #else
38a30f8f8cSSatish Balay #define MatSetValuesBlocked_SeqSBAIJ_MatScalar      MatSetValuesBlocked_SeqSBAIJ
39a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_MatScalar             MatSetValues_MPISBAIJ
40a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_MatScalar      MatSetValuesBlocked_MPISBAIJ
41a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_HT_MatScalar          MatSetValues_MPISBAIJ_HT
42a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_HT_MatScalar   MatSetValuesBlocked_MPISBAIJ_HT
43a30f8f8cSSatish Balay #endif
44a30f8f8cSSatish Balay 
45a30f8f8cSSatish Balay EXTERN_C_BEGIN
464a2ae208SSatish Balay #undef __FUNCT__
474a2ae208SSatish Balay #define __FUNCT__ "MatStoreValues_MPISBAIJ"
48a30f8f8cSSatish Balay int MatStoreValues_MPISBAIJ(Mat mat)
49a30f8f8cSSatish Balay {
50f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
51a30f8f8cSSatish Balay   int          ierr;
52a30f8f8cSSatish Balay 
53a30f8f8cSSatish Balay   PetscFunctionBegin;
54a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
55a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
56a30f8f8cSSatish Balay   PetscFunctionReturn(0);
57a30f8f8cSSatish Balay }
58a30f8f8cSSatish Balay EXTERN_C_END
59a30f8f8cSSatish Balay 
60a30f8f8cSSatish Balay EXTERN_C_BEGIN
614a2ae208SSatish Balay #undef __FUNCT__
624a2ae208SSatish Balay #define __FUNCT__ "MatRetrieveValues_MPISBAIJ"
63a30f8f8cSSatish Balay int MatRetrieveValues_MPISBAIJ(Mat mat)
64a30f8f8cSSatish Balay {
65f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
66a30f8f8cSSatish Balay   int          ierr;
67a30f8f8cSSatish Balay 
68a30f8f8cSSatish Balay   PetscFunctionBegin;
69a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
70a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
71a30f8f8cSSatish Balay   PetscFunctionReturn(0);
72a30f8f8cSSatish Balay }
73a30f8f8cSSatish Balay EXTERN_C_END
74a30f8f8cSSatish Balay 
75a30f8f8cSSatish Balay 
76a30f8f8cSSatish Balay #define CHUNKSIZE  10
77a30f8f8cSSatish Balay 
78a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv) \
79a30f8f8cSSatish Balay { \
80a30f8f8cSSatish Balay  \
81a30f8f8cSSatish Balay     brow = row/bs;  \
82a30f8f8cSSatish Balay     rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
83a30f8f8cSSatish Balay     rmax = aimax[brow]; nrow = ailen[brow]; \
84a30f8f8cSSatish Balay       bcol = col/bs; \
85a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
86a30f8f8cSSatish Balay       low = 0; high = nrow; \
87a30f8f8cSSatish Balay       while (high-low > 3) { \
88a30f8f8cSSatish Balay         t = (low+high)/2; \
89a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
90a30f8f8cSSatish Balay         else              low  = t; \
91a30f8f8cSSatish Balay       } \
92a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
93a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
94a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
95a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
96a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
97a30f8f8cSSatish Balay           else                    *bap  = value;  \
98a30f8f8cSSatish Balay           goto a_noinsert; \
99a30f8f8cSSatish Balay         } \
100a30f8f8cSSatish Balay       } \
101a30f8f8cSSatish Balay       if (a->nonew == 1) goto a_noinsert; \
102a45adfd6SMatthew Knepley       else if (a->nonew == -1) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%d, %d) into matrix", row, col); \
103a30f8f8cSSatish Balay       if (nrow >= rmax) { \
104a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
105a30f8f8cSSatish Balay         int       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
106a30f8f8cSSatish Balay         MatScalar *new_a; \
107a30f8f8cSSatish Balay  \
108a45adfd6SMatthew Knepley         if (a->nonew == -2) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%d, %d) in the matrix", row, col); \
109a30f8f8cSSatish Balay  \
110a30f8f8cSSatish Balay         /* malloc new storage space */ \
111a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(int); \
11282502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
113a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
114a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
115a30f8f8cSSatish Balay  \
116a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
117a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
118a30f8f8cSSatish Balay         for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
119a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
120a30f8f8cSSatish Balay         len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
121a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
122a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
12387828ca2SBarry Smith         ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(PetscScalar));CHKERRQ(ierr); \
124a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
125a30f8f8cSSatish Balay                     aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
126a30f8f8cSSatish Balay         /* free up old matrix storage */ \
127a30f8f8cSSatish Balay         ierr = PetscFree(a->a);CHKERRQ(ierr);  \
128a30f8f8cSSatish Balay         if (!a->singlemalloc) { \
129a30f8f8cSSatish Balay           ierr = PetscFree(a->i);CHKERRQ(ierr); \
130a30f8f8cSSatish Balay           ierr = PetscFree(a->j);CHKERRQ(ierr);\
131a30f8f8cSSatish Balay         } \
132a30f8f8cSSatish Balay         aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
133a30f8f8cSSatish Balay         a->singlemalloc = PETSC_TRUE; \
134a30f8f8cSSatish Balay  \
135a30f8f8cSSatish Balay         rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
136a30f8f8cSSatish Balay         rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
137b0a32e0cSBarry Smith         PetscLogObjectMemory(A,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
1386c6c5352SBarry Smith         a->maxnz += bs2*CHUNKSIZE; \
139a30f8f8cSSatish Balay         a->reallocs++; \
1406c6c5352SBarry Smith         a->nz++; \
141a30f8f8cSSatish Balay       } \
142a30f8f8cSSatish Balay       N = nrow++ - 1;  \
143a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
144a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
145a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
146a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
147a30f8f8cSSatish Balay       } \
148a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
149a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
150a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
151a30f8f8cSSatish Balay       a_noinsert:; \
152a30f8f8cSSatish Balay     ailen[brow] = nrow; \
153a30f8f8cSSatish Balay }
154a30f8f8cSSatish Balay #ifndef MatSetValues_SeqBAIJ_B_Private
155a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv) \
156a30f8f8cSSatish Balay { \
157a30f8f8cSSatish Balay     brow = row/bs;  \
158a30f8f8cSSatish Balay     rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
159a30f8f8cSSatish Balay     rmax = bimax[brow]; nrow = bilen[brow]; \
160a30f8f8cSSatish Balay       bcol = col/bs; \
161a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
162a30f8f8cSSatish Balay       low = 0; high = nrow; \
163a30f8f8cSSatish Balay       while (high-low > 3) { \
164a30f8f8cSSatish Balay         t = (low+high)/2; \
165a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
166a30f8f8cSSatish Balay         else              low  = t; \
167a30f8f8cSSatish Balay       } \
168a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
169a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
170a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
171a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
172a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
173a30f8f8cSSatish Balay           else                    *bap  = value;  \
174a30f8f8cSSatish Balay           goto b_noinsert; \
175a30f8f8cSSatish Balay         } \
176a30f8f8cSSatish Balay       } \
177a30f8f8cSSatish Balay       if (b->nonew == 1) goto b_noinsert; \
178a45adfd6SMatthew Knepley       else if (b->nonew == -1) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%d, %d) into matrix", row, col); \
179a30f8f8cSSatish Balay       if (nrow >= rmax) { \
180a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
181a30f8f8cSSatish Balay         int       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
182a30f8f8cSSatish Balay         MatScalar *new_a; \
183a30f8f8cSSatish Balay  \
184a45adfd6SMatthew Knepley         if (b->nonew == -2) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%d, %d) in the matrix", row, col); \
185a30f8f8cSSatish Balay  \
186a30f8f8cSSatish Balay         /* malloc new storage space */ \
187a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(int); \
18882502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
189a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
190a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
191a30f8f8cSSatish Balay  \
192a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
193a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
194a30f8f8cSSatish Balay         for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
195a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
196a30f8f8cSSatish Balay         len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
197a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
198a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
199a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
200a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
201a30f8f8cSSatish Balay                     ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
202a30f8f8cSSatish Balay         /* free up old matrix storage */ \
203a30f8f8cSSatish Balay         ierr = PetscFree(b->a);CHKERRQ(ierr);  \
204a30f8f8cSSatish Balay         if (!b->singlemalloc) { \
205a30f8f8cSSatish Balay           ierr = PetscFree(b->i);CHKERRQ(ierr); \
206a30f8f8cSSatish Balay           ierr = PetscFree(b->j);CHKERRQ(ierr); \
207a30f8f8cSSatish Balay         } \
208a30f8f8cSSatish Balay         ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
209a30f8f8cSSatish Balay         b->singlemalloc = PETSC_TRUE; \
210a30f8f8cSSatish Balay  \
211a30f8f8cSSatish Balay         rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
212a30f8f8cSSatish Balay         rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
213b0a32e0cSBarry Smith         PetscLogObjectMemory(B,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
214a30f8f8cSSatish Balay         b->maxnz += bs2*CHUNKSIZE; \
215a30f8f8cSSatish Balay         b->reallocs++; \
216a30f8f8cSSatish Balay         b->nz++; \
217a30f8f8cSSatish Balay       } \
218a30f8f8cSSatish Balay       N = nrow++ - 1;  \
219a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
220a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
221a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
222a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
223a30f8f8cSSatish Balay       } \
224a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
225a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
226a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
227a30f8f8cSSatish Balay       b_noinsert:; \
228a30f8f8cSSatish Balay     bilen[brow] = nrow; \
229a30f8f8cSSatish Balay }
230a30f8f8cSSatish Balay #endif
231a30f8f8cSSatish Balay 
232a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
2334a2ae208SSatish Balay #undef __FUNCT__
2344a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ"
235f15d580aSBarry Smith int MatSetValues_MPISBAIJ(Mat mat,int m,const int im[],int n,const int in[],const PetscScalar v[],InsertMode addv)
236a30f8f8cSSatish Balay {
237a30f8f8cSSatish Balay   Mat_MPISBAIJ *b = (Mat_MPISBAIJ*)mat->data;
238a30f8f8cSSatish Balay   int          ierr,i,N = m*n;
239a30f8f8cSSatish Balay   MatScalar    *vsingle;
240a30f8f8cSSatish Balay 
241a30f8f8cSSatish Balay   PetscFunctionBegin;
242a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
243a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
24482502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
245a30f8f8cSSatish Balay     b->setvalueslen  = N;
246a30f8f8cSSatish Balay   }
247a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
248a30f8f8cSSatish Balay 
249a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
250a30f8f8cSSatish Balay     vsingle[i] = v[i];
251a30f8f8cSSatish Balay   }
252a30f8f8cSSatish Balay   ierr = MatSetValues_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
253a30f8f8cSSatish Balay   PetscFunctionReturn(0);
254a30f8f8cSSatish Balay }
255a30f8f8cSSatish Balay 
2564a2ae208SSatish Balay #undef __FUNCT__
2574a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ"
258f15d580aSBarry Smith int MatSetValuesBlocked_MPISBAIJ(Mat mat,int m,const int im[],int n,const int in[],const PetscScalar v[],InsertMode addv)
259a30f8f8cSSatish Balay {
260a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
261a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
262a30f8f8cSSatish Balay   MatScalar   *vsingle;
263a30f8f8cSSatish Balay 
264a30f8f8cSSatish Balay   PetscFunctionBegin;
265a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
266a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
26782502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
268a30f8f8cSSatish Balay     b->setvalueslen  = N;
269a30f8f8cSSatish Balay   }
270a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
271a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
272a30f8f8cSSatish Balay     vsingle[i] = v[i];
273a30f8f8cSSatish Balay   }
274a30f8f8cSSatish Balay   ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
275a30f8f8cSSatish Balay   PetscFunctionReturn(0);
276a30f8f8cSSatish Balay }
277a30f8f8cSSatish Balay 
2784a2ae208SSatish Balay #undef __FUNCT__
2794a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ_HT"
280f15d580aSBarry Smith int MatSetValues_MPISBAIJ_HT(Mat mat,int m,const int im[],int n,const int in[],const PetscScalar v[],InsertMode addv)
281a30f8f8cSSatish Balay {
282a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
283a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
284a30f8f8cSSatish Balay   MatScalar   *vsingle;
285a30f8f8cSSatish Balay 
286a30f8f8cSSatish Balay   PetscFunctionBegin;
28729bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
2884d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
289a30f8f8cSSatish Balay }
290a30f8f8cSSatish Balay 
2914a2ae208SSatish Balay #undef __FUNCT__
2924a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ_HT"
293f15d580aSBarry Smith int MatSetValuesBlocked_MPISBAIJ_HT(Mat mat,int m,const int im[],int n,const int in[],const PetscScalar v[],InsertMode addv)
294a30f8f8cSSatish Balay {
295a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
296a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
297a30f8f8cSSatish Balay   MatScalar   *vsingle;
298a30f8f8cSSatish Balay 
299a30f8f8cSSatish Balay   PetscFunctionBegin;
30029bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3014d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
302a30f8f8cSSatish Balay }
303a30f8f8cSSatish Balay #endif
304a30f8f8cSSatish Balay 
305a30f8f8cSSatish Balay /* Only add/insert a(i,j) with i<=j (blocks).
306a30f8f8cSSatish Balay    Any a(i,j) with i>j input by user is ingored.
307a30f8f8cSSatish Balay */
3084a2ae208SSatish Balay #undef __FUNCT__
309e03e44c9SSatish Balay #define __FUNCT__ "MatSetValues_MPIBAIJ_MatScalar"
310f15d580aSBarry Smith int MatSetValues_MPISBAIJ_MatScalar(Mat mat,int m,const int im[],int n,const int in[],const MatScalar v[],InsertMode addv)
311a30f8f8cSSatish Balay {
312a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
313a30f8f8cSSatish Balay   MatScalar    value;
314b5df2d14SHong Zhang   PetscTruth   roworiented = baij->roworiented;
315a30f8f8cSSatish Balay   int          ierr,i,j,row,col;
316b5df2d14SHong Zhang   int          rstart_orig=baij->rstart_bs;
317a30f8f8cSSatish Balay   int          rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
318a30f8f8cSSatish Balay   int          cend_orig=baij->cend_bs,bs=baij->bs;
319a30f8f8cSSatish Balay 
320a30f8f8cSSatish Balay   /* Some Variables required in the macro */
321a30f8f8cSSatish Balay   Mat          A = baij->A;
322a30f8f8cSSatish Balay   Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)(A)->data;
323a30f8f8cSSatish Balay   int          *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
324a30f8f8cSSatish Balay   MatScalar    *aa=a->a;
325a30f8f8cSSatish Balay 
326a30f8f8cSSatish Balay   Mat          B = baij->B;
327a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(B)->data;
328a30f8f8cSSatish Balay   int          *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
329a30f8f8cSSatish Balay   MatScalar    *ba=b->a;
330a30f8f8cSSatish Balay 
331a30f8f8cSSatish Balay   int          *rp,ii,nrow,_i,rmax,N,brow,bcol;
332a30f8f8cSSatish Balay   int          low,high,t,ridx,cidx,bs2=a->bs2;
333a30f8f8cSSatish Balay   MatScalar    *ap,*bap;
334a30f8f8cSSatish Balay 
335a30f8f8cSSatish Balay   /* for stash */
336f65c83cfSHong Zhang   int          n_loc, *in_loc=0;
337f65c83cfSHong Zhang   MatScalar    *v_loc=0;
338a30f8f8cSSatish Balay 
339a30f8f8cSSatish Balay   PetscFunctionBegin;
340a30f8f8cSSatish Balay 
341a30f8f8cSSatish Balay   if(!baij->donotstash){
34282502324SSatish Balay     ierr = PetscMalloc(n*sizeof(int),&in_loc);CHKERRQ(ierr);
34382502324SSatish Balay     ierr = PetscMalloc(n*sizeof(MatScalar),&v_loc);CHKERRQ(ierr);
344a30f8f8cSSatish Balay   }
345a30f8f8cSSatish Balay 
346a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
347a30f8f8cSSatish Balay     if (im[i] < 0) continue;
348a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
349590ac198SBarry Smith     if (im[i] >= mat->M) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %d max %d",im[i],mat->M-1);
350a30f8f8cSSatish Balay #endif
351a30f8f8cSSatish Balay     if (im[i] >= rstart_orig && im[i] < rend_orig) { /* this processor entry */
352a30f8f8cSSatish Balay       row = im[i] - rstart_orig;              /* local row index */
353a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
354f65c83cfSHong Zhang         if (im[i]/bs > in[j]/bs) continue;    /* ignore lower triangular blocks */
355a30f8f8cSSatish Balay         if (in[j] >= cstart_orig && in[j] < cend_orig){  /* diag entry (A) */
356a30f8f8cSSatish Balay           col = in[j] - cstart_orig;          /* local col index */
357a30f8f8cSSatish Balay           brow = row/bs; bcol = col/bs;
358a30f8f8cSSatish Balay           if (brow > bcol) continue;  /* ignore lower triangular blocks of A */
359a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
360a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv);
361a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
362a30f8f8cSSatish Balay         } else if (in[j] < 0) continue;
363a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
364590ac198SBarry Smith         else if (in[j] >= mat->N) {SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Column too large: col %d max %d",in[j],mat->N-1);}
365a30f8f8cSSatish Balay #endif
366a30f8f8cSSatish Balay         else {  /* off-diag entry (B) */
367a30f8f8cSSatish Balay           if (mat->was_assembled) {
368a30f8f8cSSatish Balay             if (!baij->colmap) {
369653e4784SBarry Smith               ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
370a30f8f8cSSatish Balay             }
371a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
372a30f8f8cSSatish Balay             ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
37371730473SSatish Balay             col  = col - 1;
374a30f8f8cSSatish Balay #else
37571730473SSatish Balay             col = baij->colmap[in[j]/bs] - 1;
376a30f8f8cSSatish Balay #endif
377a30f8f8cSSatish Balay             if (col < 0 && !((Mat_SeqSBAIJ*)(baij->A->data))->nonew) {
378a30f8f8cSSatish Balay               ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
379a30f8f8cSSatish Balay               col =  in[j];
380a30f8f8cSSatish Balay               /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
381a30f8f8cSSatish Balay               B = baij->B;
382a30f8f8cSSatish Balay               b = (Mat_SeqBAIJ*)(B)->data;
383a30f8f8cSSatish Balay               bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
384a30f8f8cSSatish Balay               ba=b->a;
38571730473SSatish Balay             } else col += in[j]%bs;
386a30f8f8cSSatish Balay           } else col = in[j];
387a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
388a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv);
389a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
390a30f8f8cSSatish Balay         }
391a30f8f8cSSatish Balay       }
392a30f8f8cSSatish Balay     } else {  /* off processor entry */
393a30f8f8cSSatish Balay       if (!baij->donotstash) {
394a30f8f8cSSatish Balay         n_loc = 0;
395a30f8f8cSSatish Balay         for (j=0; j<n; j++){
396f65c83cfSHong Zhang           if (im[i]/bs > in[j]/bs) continue; /* ignore lower triangular blocks */
397a30f8f8cSSatish Balay           in_loc[n_loc] = in[j];
398a30f8f8cSSatish Balay           if (roworiented) {
399a30f8f8cSSatish Balay             v_loc[n_loc] = v[i*n+j];
400a30f8f8cSSatish Balay           } else {
401a30f8f8cSSatish Balay             v_loc[n_loc] = v[j*m+i];
402a30f8f8cSSatish Balay           }
403a30f8f8cSSatish Balay           n_loc++;
404a30f8f8cSSatish Balay         }
405a30f8f8cSSatish Balay         ierr = MatStashValuesRow_Private(&mat->stash,im[i],n_loc,in_loc,v_loc);CHKERRQ(ierr);
406a30f8f8cSSatish Balay       }
407a30f8f8cSSatish Balay     }
408a30f8f8cSSatish Balay   }
409a30f8f8cSSatish Balay 
410a30f8f8cSSatish Balay   if(!baij->donotstash){
411a30f8f8cSSatish Balay     ierr = PetscFree(in_loc);CHKERRQ(ierr);
412a30f8f8cSSatish Balay     ierr = PetscFree(v_loc);CHKERRQ(ierr);
413a30f8f8cSSatish Balay   }
414a30f8f8cSSatish Balay   PetscFunctionReturn(0);
415a30f8f8cSSatish Balay }
416a30f8f8cSSatish Balay 
4174a2ae208SSatish Balay #undef __FUNCT__
418e03e44c9SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ_MatScalar"
419f15d580aSBarry Smith int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat mat,int m,const int im[],int n,const int in[],const MatScalar v[],InsertMode addv)
420a30f8f8cSSatish Balay {
4210880e062SHong Zhang   Mat_MPISBAIJ    *baij = (Mat_MPISBAIJ*)mat->data;
422f15d580aSBarry Smith   const MatScalar *value;
423f15d580aSBarry Smith   MatScalar       *barray=baij->barray;
4240880e062SHong Zhang   PetscTruth      roworiented = baij->roworiented;
4250880e062SHong Zhang   int             ierr,i,j,ii,jj,row,col,rstart=baij->rstart;
4260880e062SHong Zhang   int             rend=baij->rend,cstart=baij->cstart,stepval;
4270880e062SHong Zhang   int             cend=baij->cend,bs=baij->bs,bs2=baij->bs2;
4280880e062SHong Zhang 
429a30f8f8cSSatish Balay   PetscFunctionBegin;
4300880e062SHong Zhang   if(!barray) {
4310880e062SHong Zhang     ierr         = PetscMalloc(bs2*sizeof(MatScalar),&barray);CHKERRQ(ierr);
4320880e062SHong Zhang     baij->barray = barray;
4330880e062SHong Zhang   }
4340880e062SHong Zhang 
4350880e062SHong Zhang   if (roworiented) {
4360880e062SHong Zhang     stepval = (n-1)*bs;
4370880e062SHong Zhang   } else {
4380880e062SHong Zhang     stepval = (m-1)*bs;
4390880e062SHong Zhang   }
4400880e062SHong Zhang   for (i=0; i<m; i++) {
4410880e062SHong Zhang     if (im[i] < 0) continue;
4420880e062SHong Zhang #if defined(PETSC_USE_BOPT_g)
443590ac198SBarry Smith     if (im[i] >= baij->Mbs) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large, row %d max %d",im[i],baij->Mbs-1);
4440880e062SHong Zhang #endif
4450880e062SHong Zhang     if (im[i] >= rstart && im[i] < rend) {
4460880e062SHong Zhang       row = im[i] - rstart;
4470880e062SHong Zhang       for (j=0; j<n; j++) {
4480880e062SHong Zhang         /* If NumCol = 1 then a copy is not required */
4490880e062SHong Zhang         if ((roworiented) && (n == 1)) {
450f15d580aSBarry Smith           barray = (MatScalar*) v + i*bs2;
4510880e062SHong Zhang         } else if((!roworiented) && (m == 1)) {
452f15d580aSBarry Smith           barray = (MatScalar*) v + j*bs2;
4530880e062SHong Zhang         } else { /* Here a copy is required */
4540880e062SHong Zhang           if (roworiented) {
4550880e062SHong Zhang             value = v + i*(stepval+bs)*bs + j*bs;
4560880e062SHong Zhang           } else {
4570880e062SHong Zhang             value = v + j*(stepval+bs)*bs + i*bs;
4580880e062SHong Zhang           }
4590880e062SHong Zhang           for (ii=0; ii<bs; ii++,value+=stepval) {
4600880e062SHong Zhang             for (jj=0; jj<bs; jj++) {
4610880e062SHong Zhang               *barray++  = *value++;
4620880e062SHong Zhang             }
4630880e062SHong Zhang           }
4640880e062SHong Zhang           barray -=bs2;
4650880e062SHong Zhang         }
4660880e062SHong Zhang 
4670880e062SHong Zhang         if (in[j] >= cstart && in[j] < cend){
4680880e062SHong Zhang           col  = in[j] - cstart;
4690880e062SHong Zhang           ierr = MatSetValuesBlocked_SeqSBAIJ(baij->A,1,&row,1,&col,barray,addv);CHKERRQ(ierr);
4700880e062SHong Zhang         }
4710880e062SHong Zhang         else if (in[j] < 0) continue;
4720880e062SHong Zhang #if defined(PETSC_USE_BOPT_g)
473590ac198SBarry Smith         else if (in[j] >= baij->Nbs) {SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Column too large, col %d max %d",in[j],baij->Nbs-1);}
4740880e062SHong Zhang #endif
4750880e062SHong Zhang         else {
4760880e062SHong Zhang           if (mat->was_assembled) {
4770880e062SHong Zhang             if (!baij->colmap) {
478653e4784SBarry Smith               ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
4790880e062SHong Zhang             }
4800880e062SHong Zhang 
4810880e062SHong Zhang #if defined(PETSC_USE_BOPT_g)
4820880e062SHong Zhang #if defined (PETSC_USE_CTABLE)
4830880e062SHong Zhang             { int data;
4840880e062SHong Zhang               ierr = PetscTableFind(baij->colmap,in[j]+1,&data);CHKERRQ(ierr);
4850880e062SHong Zhang               if ((data - 1) % bs) SETERRQ(PETSC_ERR_PLIB,"Incorrect colmap");
4860880e062SHong Zhang             }
4870880e062SHong Zhang #else
4880880e062SHong Zhang             if ((baij->colmap[in[j]] - 1) % bs) SETERRQ(PETSC_ERR_PLIB,"Incorrect colmap");
4890880e062SHong Zhang #endif
4900880e062SHong Zhang #endif
4910880e062SHong Zhang #if defined (PETSC_USE_CTABLE)
4920880e062SHong Zhang 	    ierr = PetscTableFind(baij->colmap,in[j]+1,&col);CHKERRQ(ierr);
4930880e062SHong Zhang             col  = (col - 1)/bs;
4940880e062SHong Zhang #else
4950880e062SHong Zhang             col = (baij->colmap[in[j]] - 1)/bs;
4960880e062SHong Zhang #endif
4970880e062SHong Zhang             if (col < 0 && !((Mat_SeqBAIJ*)(baij->A->data))->nonew) {
4980880e062SHong Zhang               ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
4990880e062SHong Zhang               col =  in[j];
5000880e062SHong Zhang             }
5010880e062SHong Zhang           }
5020880e062SHong Zhang           else col = in[j];
503e249d750SSatish Balay           ierr = MatSetValuesBlocked_SeqBAIJ(baij->B,1,&row,1,&col,barray,addv);CHKERRQ(ierr);
5040880e062SHong Zhang         }
5050880e062SHong Zhang       }
5060880e062SHong Zhang     } else {
5070880e062SHong Zhang       if (!baij->donotstash) {
5080880e062SHong Zhang         if (roworiented) {
5090880e062SHong Zhang           ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
5100880e062SHong Zhang         } else {
5110880e062SHong Zhang           ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
5120880e062SHong Zhang         }
5130880e062SHong Zhang       }
5140880e062SHong Zhang     }
5150880e062SHong Zhang   }
5160880e062SHong Zhang   PetscFunctionReturn(0);
517a30f8f8cSSatish Balay }
518a30f8f8cSSatish Balay 
519a30f8f8cSSatish Balay #define HASH_KEY 0.6180339887
520a30f8f8cSSatish Balay #define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(int)((size)*(tmp-(int)tmp)))
521a30f8f8cSSatish Balay /* #define HASH(size,key) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
522a30f8f8cSSatish Balay /* #define HASH(size,key,tmp) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
5234a2ae208SSatish Balay #undef __FUNCT__
5244a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPISBAIJ_HT_MatScalar"
525f15d580aSBarry Smith int MatSetValues_MPISBAIJ_HT_MatScalar(Mat mat,int m,const int im[],int n,const int in[],const MatScalar v[],InsertMode addv)
526a30f8f8cSSatish Balay {
527a30f8f8cSSatish Balay   PetscFunctionBegin;
52829bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
52996e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
530a30f8f8cSSatish Balay }
531a30f8f8cSSatish Balay 
5324a2ae208SSatish Balay #undef __FUNCT__
5334a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPISBAIJ_HT_MatScalar"
534f15d580aSBarry Smith int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat mat,int m,const int im[],int n,const int in[],const MatScalar v[],InsertMode addv)
535a30f8f8cSSatish Balay {
536a30f8f8cSSatish Balay   PetscFunctionBegin;
53729bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
53896e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
539a30f8f8cSSatish Balay }
540a30f8f8cSSatish Balay 
5414a2ae208SSatish Balay #undef __FUNCT__
5424a2ae208SSatish Balay #define __FUNCT__ "MatGetValues_MPISBAIJ"
543f15d580aSBarry Smith int MatGetValues_MPISBAIJ(Mat mat,int m,const int idxm[],int n,const int idxn[],PetscScalar v[])
544a30f8f8cSSatish Balay {
545f3566a2aSHong Zhang   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
546a30f8f8cSSatish Balay   int          bs=baij->bs,ierr,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
547a30f8f8cSSatish Balay   int          bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;
548a30f8f8cSSatish Balay 
549a30f8f8cSSatish Balay   PetscFunctionBegin;
550a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
551590ac198SBarry Smith     if (idxm[i] < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"Negative row: %d",idxm[i]);
552590ac198SBarry Smith     if (idxm[i] >= mat->M) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %d max %d",idxm[i],mat->M-1);
553a30f8f8cSSatish Balay     if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
554a30f8f8cSSatish Balay       row = idxm[i] - bsrstart;
555a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
556590ac198SBarry Smith         if (idxn[j] < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"Negative column %d",idxn[j]);
557590ac198SBarry Smith         if (idxn[j] >= mat->N) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Column too large: col %d max %d",idxn[j],mat->N-1);
558a30f8f8cSSatish Balay         if (idxn[j] >= bscstart && idxn[j] < bscend){
559a30f8f8cSSatish Balay           col = idxn[j] - bscstart;
560c8407628SSatish Balay           ierr = MatGetValues_SeqSBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
561a30f8f8cSSatish Balay         } else {
562a30f8f8cSSatish Balay           if (!baij->colmap) {
563653e4784SBarry Smith             ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
564a30f8f8cSSatish Balay           }
565a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
566a30f8f8cSSatish Balay           ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
567a30f8f8cSSatish Balay           data --;
568a30f8f8cSSatish Balay #else
569a30f8f8cSSatish Balay           data = baij->colmap[idxn[j]/bs]-1;
570a30f8f8cSSatish Balay #endif
571a30f8f8cSSatish Balay           if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
572a30f8f8cSSatish Balay           else {
573a30f8f8cSSatish Balay             col  = data + idxn[j]%bs;
574e249d750SSatish Balay             ierr = MatGetValues_SeqBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
575a30f8f8cSSatish Balay           }
576a30f8f8cSSatish Balay         }
577a30f8f8cSSatish Balay       }
578a30f8f8cSSatish Balay     } else {
57929bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
580a30f8f8cSSatish Balay     }
581a30f8f8cSSatish Balay   }
582a30f8f8cSSatish Balay  PetscFunctionReturn(0);
583a30f8f8cSSatish Balay }
584a30f8f8cSSatish Balay 
5854a2ae208SSatish Balay #undef __FUNCT__
5864a2ae208SSatish Balay #define __FUNCT__ "MatNorm_MPISBAIJ"
587a30f8f8cSSatish Balay int MatNorm_MPISBAIJ(Mat mat,NormType type,PetscReal *norm)
588a30f8f8cSSatish Balay {
589a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
590bc0ba53dSHong Zhang   /* Mat_SeqSBAIJ *amat = (Mat_SeqSBAIJ*)baij->A->data; */
591bc0ba53dSHong Zhang   /* Mat_SeqBAIJ  *bmat = (Mat_SeqBAIJ*)baij->B->data; */
592a30f8f8cSSatish Balay   int        ierr;
593a30f8f8cSSatish Balay   PetscReal  sum[2],*lnorm2;
594a30f8f8cSSatish Balay 
595a30f8f8cSSatish Balay   PetscFunctionBegin;
596a30f8f8cSSatish Balay   if (baij->size == 1) {
597a30f8f8cSSatish Balay     ierr =  MatNorm(baij->A,type,norm);CHKERRQ(ierr);
598a30f8f8cSSatish Balay   } else {
599a30f8f8cSSatish Balay     if (type == NORM_FROBENIUS) {
600f6275e2eSBarry Smith       ierr = PetscMalloc(2*sizeof(PetscReal),&lnorm2);CHKERRQ(ierr);
601a30f8f8cSSatish Balay       ierr =  MatNorm(baij->A,type,lnorm2);CHKERRQ(ierr);
602a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2++;            /* squar power of norm(A) */
603a30f8f8cSSatish Balay       ierr =  MatNorm(baij->B,type,lnorm2);CHKERRQ(ierr);
604a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2--;             /* squar power of norm(B) */
605a30f8f8cSSatish Balay       /*
60656faa61eSBarry Smith       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
60756faa61eSBarry Smith       PetscSynchronizedPrintf(mat->comm,"[%d], lnorm2=%g, %g\n",rank,lnorm2[0],lnorm2[1]);
608a30f8f8cSSatish Balay       */
609d7d1e502SBarry Smith       ierr = MPI_Allreduce(lnorm2,&sum,2,MPIU_REAL,MPI_SUM,mat->comm);CHKERRQ(ierr);
610a30f8f8cSSatish Balay       /*
61156faa61eSBarry Smith       PetscSynchronizedPrintf(mat->comm,"[%d], sum=%g, %g\n",rank,sum[0],sum[1]);
61256faa61eSBarry Smith       PetscSynchronizedFlush(mat->comm); */
613a30f8f8cSSatish Balay 
614a30f8f8cSSatish Balay       *norm = sqrt(sum[0] + 2*sum[1]);
615a30f8f8cSSatish Balay       ierr = PetscFree(lnorm2);CHKERRQ(ierr);
616a30f8f8cSSatish Balay     } else {
61729bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
618a30f8f8cSSatish Balay     }
619a30f8f8cSSatish Balay   }
620a30f8f8cSSatish Balay   PetscFunctionReturn(0);
621a30f8f8cSSatish Balay }
622a30f8f8cSSatish Balay 
623a30f8f8cSSatish Balay /*
624a30f8f8cSSatish Balay   Creates the hash table, and sets the table
625a30f8f8cSSatish Balay   This table is created only once.
626a30f8f8cSSatish Balay   If new entried need to be added to the matrix
627a30f8f8cSSatish Balay   then the hash table has to be destroyed and
628a30f8f8cSSatish Balay   recreated.
629a30f8f8cSSatish Balay */
6304a2ae208SSatish Balay #undef __FUNCT__
6314a2ae208SSatish Balay #define __FUNCT__ "MatCreateHashTable_MPISBAIJ_Private"
632a30f8f8cSSatish Balay int MatCreateHashTable_MPISBAIJ_Private(Mat mat,PetscReal factor)
633a30f8f8cSSatish Balay {
634a30f8f8cSSatish Balay   PetscFunctionBegin;
63529bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
63696e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
637a30f8f8cSSatish Balay }
638a30f8f8cSSatish Balay 
6394a2ae208SSatish Balay #undef __FUNCT__
6404a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyBegin_MPISBAIJ"
641a30f8f8cSSatish Balay int MatAssemblyBegin_MPISBAIJ(Mat mat,MatAssemblyType mode)
642a30f8f8cSSatish Balay {
643a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
644a30f8f8cSSatish Balay   int         ierr,nstash,reallocs;
645a30f8f8cSSatish Balay   InsertMode  addv;
646a30f8f8cSSatish Balay 
647a30f8f8cSSatish Balay   PetscFunctionBegin;
648a30f8f8cSSatish Balay   if (baij->donotstash) {
649a30f8f8cSSatish Balay     PetscFunctionReturn(0);
650a30f8f8cSSatish Balay   }
651a30f8f8cSSatish Balay 
652a30f8f8cSSatish Balay   /* make sure all processors are either in INSERTMODE or ADDMODE */
653a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
654a30f8f8cSSatish Balay   if (addv == (ADD_VALUES|INSERT_VALUES)) {
65529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
656a30f8f8cSSatish Balay   }
657a30f8f8cSSatish Balay   mat->insertmode = addv; /* in case this processor had no cache */
658a30f8f8cSSatish Balay 
659a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
660a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
661a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
662b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Stash has %d entries,uses %d mallocs.\n",nstash,reallocs);
663a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
664b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Block-Stash has %d entries, uses %d mallocs.\n",nstash,reallocs);
665a30f8f8cSSatish Balay   PetscFunctionReturn(0);
666a30f8f8cSSatish Balay }
667a30f8f8cSSatish Balay 
6684a2ae208SSatish Balay #undef __FUNCT__
6694a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyEnd_MPISBAIJ"
670a30f8f8cSSatish Balay int MatAssemblyEnd_MPISBAIJ(Mat mat,MatAssemblyType mode)
671a30f8f8cSSatish Balay {
672a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij=(Mat_MPISBAIJ*)mat->data;
673a30f8f8cSSatish Balay   Mat_SeqSBAIJ  *a=(Mat_SeqSBAIJ*)baij->A->data;
674a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b=(Mat_SeqBAIJ*)baij->B->data;
675a30f8f8cSSatish Balay   int         i,j,rstart,ncols,n,ierr,flg,bs2=baij->bs2;
676a30f8f8cSSatish Balay   int         *row,*col,other_disassembled;
677a30f8f8cSSatish Balay   PetscTruth  r1,r2,r3;
678a30f8f8cSSatish Balay   MatScalar   *val;
679a30f8f8cSSatish Balay   InsertMode  addv = mat->insertmode;
680a30f8f8cSSatish Balay 
681a30f8f8cSSatish Balay   PetscFunctionBegin;
682a30f8f8cSSatish Balay 
683a30f8f8cSSatish Balay   if (!baij->donotstash) {
684a30f8f8cSSatish Balay     while (1) {
685a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
686a30f8f8cSSatish Balay       /*
68756faa61eSBarry Smith       PetscSynchronizedPrintf(mat->comm,"[%d]: in AssemblyEnd, stash, flg=%d\n",rank,flg);
68856faa61eSBarry Smith       PetscSynchronizedFlush(mat->comm);
689a30f8f8cSSatish Balay       */
690a30f8f8cSSatish Balay       if (!flg) break;
691a30f8f8cSSatish Balay 
692a30f8f8cSSatish Balay       for (i=0; i<n;) {
693a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
694a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
695a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
696a30f8f8cSSatish Balay         else       ncols = n-i;
697a30f8f8cSSatish Balay         /* Now assemble all these values with a single function call */
698a30f8f8cSSatish Balay         ierr = MatSetValues_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
699a30f8f8cSSatish Balay         i = j;
700a30f8f8cSSatish Balay       }
701a30f8f8cSSatish Balay     }
702a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
703a30f8f8cSSatish Balay     /* Now process the block-stash. Since the values are stashed column-oriented,
704a30f8f8cSSatish Balay        set the roworiented flag to column oriented, and after MatSetValues()
705a30f8f8cSSatish Balay        restore the original flags */
706a30f8f8cSSatish Balay     r1 = baij->roworiented;
707a30f8f8cSSatish Balay     r2 = a->roworiented;
708a30f8f8cSSatish Balay     r3 = b->roworiented;
709a30f8f8cSSatish Balay     baij->roworiented = PETSC_FALSE;
710a30f8f8cSSatish Balay     a->roworiented    = PETSC_FALSE;
711a30f8f8cSSatish Balay     b->roworiented    = PETSC_FALSE;
712a30f8f8cSSatish Balay     while (1) {
713a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
714a30f8f8cSSatish Balay       if (!flg) break;
715a30f8f8cSSatish Balay 
716a30f8f8cSSatish Balay       for (i=0; i<n;) {
717a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
718a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
719a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
720a30f8f8cSSatish Balay         else       ncols = n-i;
721a30f8f8cSSatish Balay         ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
722a30f8f8cSSatish Balay         i = j;
723a30f8f8cSSatish Balay       }
724a30f8f8cSSatish Balay     }
725a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
726a30f8f8cSSatish Balay     baij->roworiented = r1;
727a30f8f8cSSatish Balay     a->roworiented    = r2;
728a30f8f8cSSatish Balay     b->roworiented    = r3;
729a30f8f8cSSatish Balay   }
730a30f8f8cSSatish Balay 
731a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
732a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);
733a30f8f8cSSatish Balay 
734a30f8f8cSSatish Balay   /* determine if any processor has disassembled, if so we must
735a30f8f8cSSatish Balay      also disassemble ourselfs, in order that we may reassemble. */
736a30f8f8cSSatish Balay   /*
737a30f8f8cSSatish Balay      if nonzero structure of submatrix B cannot change then we know that
738a30f8f8cSSatish Balay      no processor disassembled thus we can skip this stuff
739a30f8f8cSSatish Balay   */
740a30f8f8cSSatish Balay   if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
741a30f8f8cSSatish Balay     ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
742a30f8f8cSSatish Balay     if (mat->was_assembled && !other_disassembled) {
743c8407628SSatish Balay       ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
744a30f8f8cSSatish Balay     }
745a30f8f8cSSatish Balay   }
746a30f8f8cSSatish Balay 
747a30f8f8cSSatish Balay   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
74840781036SHong Zhang     ierr = MatSetUpMultiply_MPISBAIJ(mat);CHKERRQ(ierr); /* setup Mvctx and sMvctx */
749a30f8f8cSSatish Balay   }
750a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
751a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);
752a30f8f8cSSatish Balay 
753a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
754a30f8f8cSSatish Balay   if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
755f6275e2eSBarry Smith     PetscLogInfo(0,"MatAssemblyEnd_MPISBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((PetscReal)baij->ht_total_ct)/baij->ht_insert_ct);
756a30f8f8cSSatish Balay     baij->ht_total_ct  = 0;
757a30f8f8cSSatish Balay     baij->ht_insert_ct = 0;
758a30f8f8cSSatish Balay   }
759a30f8f8cSSatish Balay #endif
760a30f8f8cSSatish Balay   if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
761c8407628SSatish Balay     ierr = MatCreateHashTable_MPISBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
762a30f8f8cSSatish Balay     mat->ops->setvalues        = MatSetValues_MPISBAIJ_HT;
763a30f8f8cSSatish Balay     mat->ops->setvaluesblocked = MatSetValuesBlocked_MPISBAIJ_HT;
764a30f8f8cSSatish Balay   }
765a30f8f8cSSatish Balay 
766a30f8f8cSSatish Balay   if (baij->rowvalues) {
767a30f8f8cSSatish Balay     ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
768a30f8f8cSSatish Balay     baij->rowvalues = 0;
769a30f8f8cSSatish Balay   }
7705222a1afSHong Zhang 
771a30f8f8cSSatish Balay   PetscFunctionReturn(0);
772a30f8f8cSSatish Balay }
773a30f8f8cSSatish Balay 
7744a2ae208SSatish Balay #undef __FUNCT__
7754a2ae208SSatish Balay #define __FUNCT__ "MatView_MPISBAIJ_ASCIIorDraworSocket"
776b0a32e0cSBarry Smith static int MatView_MPISBAIJ_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
777a30f8f8cSSatish Balay {
778a30f8f8cSSatish Balay   Mat_MPISBAIJ      *baij = (Mat_MPISBAIJ*)mat->data;
779fb9695e5SSatish Balay   int               ierr,bs = baij->bs,size = baij->size,rank = baij->rank;
780a30f8f8cSSatish Balay   PetscTruth        isascii,isdraw;
781b0a32e0cSBarry Smith   PetscViewer       sviewer;
782f3ef73ceSBarry Smith   PetscViewerFormat format;
783a30f8f8cSSatish Balay 
784a30f8f8cSSatish Balay   PetscFunctionBegin;
785b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
786fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
787a30f8f8cSSatish Balay   if (isascii) {
788b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
789456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
790a30f8f8cSSatish Balay       MatInfo info;
791a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
792a30f8f8cSSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
793b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %d nz %d nz alloced %d bs %d mem %d\n",
794b5df2d14SHong Zhang               rank,mat->m,(int)info.nz_used*bs,(int)info.nz_allocated*bs,
795a30f8f8cSSatish Balay               baij->bs,(int)info.memory);CHKERRQ(ierr);
796a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
797b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
798a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
799b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
800b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
801a30f8f8cSSatish Balay       ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
802a30f8f8cSSatish Balay       PetscFunctionReturn(0);
803fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
804b0a32e0cSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  block size is %d\n",bs);CHKERRQ(ierr);
805a30f8f8cSSatish Balay       PetscFunctionReturn(0);
806a30f8f8cSSatish Balay     }
807a30f8f8cSSatish Balay   }
808a30f8f8cSSatish Balay 
809a30f8f8cSSatish Balay   if (isdraw) {
810b0a32e0cSBarry Smith     PetscDraw       draw;
811a30f8f8cSSatish Balay     PetscTruth isnull;
812b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
813b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
814a30f8f8cSSatish Balay   }
815a30f8f8cSSatish Balay 
816a30f8f8cSSatish Balay   if (size == 1) {
817e36acaf3SBarry Smith     ierr = PetscObjectSetName((PetscObject)baij->A,mat->name);CHKERRQ(ierr);
818a30f8f8cSSatish Balay     ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
819a30f8f8cSSatish Balay   } else {
820a30f8f8cSSatish Balay     /* assemble the entire matrix onto first processor. */
821a30f8f8cSSatish Balay     Mat         A;
82265d70643SHong Zhang     Mat_SeqSBAIJ *Aloc;
82365d70643SHong Zhang     Mat_SeqBAIJ *Bloc;
824b5df2d14SHong Zhang     int         M = mat->M,N = mat->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
825a30f8f8cSSatish Balay     MatScalar   *a;
826a30f8f8cSSatish Balay 
827*f204ca49SKris Buschelman     /* Should this be the same type as mat? */
828a30f8f8cSSatish Balay     if (!rank) {
829*f204ca49SKris Buschelman       ierr = MatCreate(mat->comm,M,N,M,N,&A);CHKERRQ(ierr);
830a30f8f8cSSatish Balay     } else {
831*f204ca49SKris Buschelman       ierr = MatCreate(mat->comm,0,0,M,N,&A);CHKERRQ(ierr);
832a30f8f8cSSatish Balay     }
833*f204ca49SKris Buschelman     ierr = MatSetType(A,MATMPISBAIJ);CHKERRQ(ierr);
834*f204ca49SKris Buschelman     ierr = MatMPISBAIJSetPreallocation(A,baij->bs,0,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr);
835b0a32e0cSBarry Smith     PetscLogObjectParent(mat,A);
836a30f8f8cSSatish Balay 
837a30f8f8cSSatish Balay     /* copy over the A part */
83865d70643SHong Zhang     Aloc  = (Mat_SeqSBAIJ*)baij->A->data;
839a30f8f8cSSatish Balay     ai    = Aloc->i; aj = Aloc->j; a = Aloc->a;
84082502324SSatish Balay     ierr  = PetscMalloc(bs*sizeof(int),&rvals);CHKERRQ(ierr);
841a30f8f8cSSatish Balay 
842a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
843a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
844a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
845a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
846a30f8f8cSSatish Balay         col = (baij->cstart+aj[j])*bs;
847a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
848a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
849a30f8f8cSSatish Balay           col++; a += bs;
850a30f8f8cSSatish Balay         }
851a30f8f8cSSatish Balay       }
852a30f8f8cSSatish Balay     }
853a30f8f8cSSatish Balay     /* copy over the B part */
85465d70643SHong Zhang     Bloc = (Mat_SeqBAIJ*)baij->B->data;
85565d70643SHong Zhang     ai = Bloc->i; aj = Bloc->j; a = Bloc->a;
856a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
857a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
858a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
859a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
860a30f8f8cSSatish Balay         col = baij->garray[aj[j]]*bs;
861a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
862a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
863a30f8f8cSSatish Balay           col++; a += bs;
864a30f8f8cSSatish Balay         }
865a30f8f8cSSatish Balay       }
866a30f8f8cSSatish Balay     }
867a30f8f8cSSatish Balay     ierr = PetscFree(rvals);CHKERRQ(ierr);
868a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
869a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
870a30f8f8cSSatish Balay     /*
871a30f8f8cSSatish Balay        Everyone has to call to draw the matrix since the graphics waits are
872b0a32e0cSBarry Smith        synchronized across all processors that share the PetscDraw object
873a30f8f8cSSatish Balay     */
874b0a32e0cSBarry Smith     ierr = PetscViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
87565d70643SHong Zhang     if (!rank) {
876e36acaf3SBarry Smith       ierr = PetscObjectSetName((PetscObject)((Mat_MPISBAIJ*)(A->data))->A,mat->name);CHKERRQ(ierr);
877a30f8f8cSSatish Balay       ierr = MatView(((Mat_MPISBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
878a30f8f8cSSatish Balay     }
879b0a32e0cSBarry Smith     ierr = PetscViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
880a30f8f8cSSatish Balay     ierr = MatDestroy(A);CHKERRQ(ierr);
881a30f8f8cSSatish Balay   }
882a30f8f8cSSatish Balay   PetscFunctionReturn(0);
883a30f8f8cSSatish Balay }
884a30f8f8cSSatish Balay 
8854a2ae208SSatish Balay #undef __FUNCT__
8864a2ae208SSatish Balay #define __FUNCT__ "MatView_MPISBAIJ"
887b0a32e0cSBarry Smith int MatView_MPISBAIJ(Mat mat,PetscViewer viewer)
888a30f8f8cSSatish Balay {
889a30f8f8cSSatish Balay   int        ierr;
890a30f8f8cSSatish Balay   PetscTruth isascii,isdraw,issocket,isbinary;
891a30f8f8cSSatish Balay 
892a30f8f8cSSatish Balay   PetscFunctionBegin;
893b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
894fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
895b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_SOCKET,&issocket);CHKERRQ(ierr);
896fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_BINARY,&isbinary);CHKERRQ(ierr);
897a30f8f8cSSatish Balay   if (isascii || isdraw || issocket || isbinary) {
898a30f8f8cSSatish Balay     ierr = MatView_MPISBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
899a30f8f8cSSatish Balay   } else {
90029bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by MPISBAIJ matrices",((PetscObject)viewer)->type_name);
901a30f8f8cSSatish Balay   }
902a30f8f8cSSatish Balay   PetscFunctionReturn(0);
903a30f8f8cSSatish Balay }
904a30f8f8cSSatish Balay 
9054a2ae208SSatish Balay #undef __FUNCT__
9064a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_MPISBAIJ"
907a30f8f8cSSatish Balay int MatDestroy_MPISBAIJ(Mat mat)
908a30f8f8cSSatish Balay {
909a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
910a30f8f8cSSatish Balay   int         ierr;
911a30f8f8cSSatish Balay 
912a30f8f8cSSatish Balay   PetscFunctionBegin;
913a30f8f8cSSatish Balay #if defined(PETSC_USE_LOG)
914b0a32e0cSBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%d,Cols=%d",mat->M,mat->N);
915a30f8f8cSSatish Balay #endif
916a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
917a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
918a30f8f8cSSatish Balay   ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
919a30f8f8cSSatish Balay   ierr = MatDestroy(baij->A);CHKERRQ(ierr);
920a30f8f8cSSatish Balay   ierr = MatDestroy(baij->B);CHKERRQ(ierr);
921a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
922a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
923a30f8f8cSSatish Balay #else
924a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
925a30f8f8cSSatish Balay #endif
926a30f8f8cSSatish Balay   if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
927a30f8f8cSSatish Balay   if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
928a30f8f8cSSatish Balay   if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
92940781036SHong Zhang   if (baij->slvec0) {
93040781036SHong Zhang     ierr = VecDestroy(baij->slvec0);CHKERRQ(ierr);
93140781036SHong Zhang     ierr = VecDestroy(baij->slvec0b);CHKERRQ(ierr);
93240781036SHong Zhang   }
93340781036SHong Zhang   if (baij->slvec1) {
93440781036SHong Zhang     ierr = VecDestroy(baij->slvec1);CHKERRQ(ierr);
93540781036SHong Zhang     ierr = VecDestroy(baij->slvec1a);CHKERRQ(ierr);
93640781036SHong Zhang     ierr = VecDestroy(baij->slvec1b);CHKERRQ(ierr);
93740781036SHong Zhang   }
93840781036SHong Zhang   if (baij->sMvctx)  {ierr = VecScatterDestroy(baij->sMvctx);CHKERRQ(ierr);}
939a30f8f8cSSatish Balay   if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
940a30f8f8cSSatish Balay   if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
941a30f8f8cSSatish Balay   if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
942a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
943a30f8f8cSSatish Balay   if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
944a30f8f8cSSatish Balay #endif
945a30f8f8cSSatish Balay   ierr = PetscFree(baij);CHKERRQ(ierr);
946a30f8f8cSSatish Balay   PetscFunctionReturn(0);
947a30f8f8cSSatish Balay }
948a30f8f8cSSatish Balay 
9494a2ae208SSatish Balay #undef __FUNCT__
950a9d4b620SHong Zhang #define __FUNCT__ "MatMult_MPISBAIJ"
951a9d4b620SHong Zhang int MatMult_MPISBAIJ(Mat A,Vec xx,Vec yy)
952a9d4b620SHong Zhang {
953a9d4b620SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
9544024bf32SHong Zhang   int         ierr,nt,mbs=a->mbs,bs=a->bs;
955a9d4b620SHong Zhang   PetscScalar *x,*from,zero=0.0;
956a9d4b620SHong Zhang 
957a9d4b620SHong Zhang   PetscFunctionBegin;
958a9d4b620SHong Zhang   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
959a9d4b620SHong Zhang   if (nt != A->n) {
960a9d4b620SHong Zhang     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
961a9d4b620SHong Zhang   }
962a9d4b620SHong Zhang   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
963a9d4b620SHong Zhang   if (nt != A->m) {
964a9d4b620SHong Zhang     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
965a9d4b620SHong Zhang   }
966a9d4b620SHong Zhang 
967a9d4b620SHong Zhang   /* diagonal part */
968a9d4b620SHong Zhang   ierr = (*a->A->ops->mult)(a->A,xx,a->slvec1a);CHKERRQ(ierr);
969a9d4b620SHong Zhang   ierr = VecSet(&zero,a->slvec1b);CHKERRQ(ierr);
970a9d4b620SHong Zhang 
971a9d4b620SHong Zhang   /* subdiagonal part */
972a9d4b620SHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->slvec0b);CHKERRQ(ierr);
973a9d4b620SHong Zhang 
974a9d4b620SHong Zhang   /* copy x into the vec slvec0 */
975b1d4fb26SBarry Smith   ierr = VecGetArrayFast(a->slvec0,&from);CHKERRQ(ierr);
976b1d4fb26SBarry Smith   ierr = VecGetArrayFast(xx,&x);CHKERRQ(ierr);
977a9d4b620SHong Zhang   ierr = PetscMemcpy(from,x,bs*mbs*sizeof(MatScalar));CHKERRQ(ierr);
978b1d4fb26SBarry Smith   ierr = VecRestoreArrayFast(a->slvec0,&from);CHKERRQ(ierr);
979a9d4b620SHong Zhang 
980a9d4b620SHong Zhang   ierr = VecScatterBegin(a->slvec0,a->slvec1,ADD_VALUES,SCATTER_FORWARD,a->sMvctx);CHKERRQ(ierr);
981b1d4fb26SBarry Smith   ierr = VecRestoreArrayFast(xx,&x);CHKERRQ(ierr);
982a9d4b620SHong Zhang   ierr = VecScatterEnd(a->slvec0,a->slvec1,ADD_VALUES,SCATTER_FORWARD,a->sMvctx);CHKERRQ(ierr);
983a9d4b620SHong Zhang 
984a9d4b620SHong Zhang   /* supperdiagonal part */
985a9d4b620SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->slvec1b,a->slvec1a,yy);CHKERRQ(ierr);
986a9d4b620SHong Zhang 
987a9d4b620SHong Zhang   PetscFunctionReturn(0);
988a9d4b620SHong Zhang }
989a9d4b620SHong Zhang 
990a9d4b620SHong Zhang #undef __FUNCT__
99140781036SHong Zhang #define __FUNCT__ "MatMult_MPISBAIJ_2comm"
99240781036SHong Zhang int MatMult_MPISBAIJ_2comm(Mat A,Vec xx,Vec yy)
993a30f8f8cSSatish Balay {
994a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
995a30f8f8cSSatish Balay   int         ierr,nt;
996a30f8f8cSSatish Balay 
997a30f8f8cSSatish Balay   PetscFunctionBegin;
998a30f8f8cSSatish Balay   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
999b5df2d14SHong Zhang   if (nt != A->n) {
100029bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
1001a30f8f8cSSatish Balay   }
1002a30f8f8cSSatish Balay   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
1003b5df2d14SHong Zhang   if (nt != A->m) {
100429bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
1005a30f8f8cSSatish Balay   }
100665d70643SHong Zhang 
1007b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1008b941877fSHong Zhang   /* do diagonal part */
1009b941877fSHong Zhang   ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
1010b941877fSHong Zhang   /* do supperdiagonal part */
1011b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1012b941877fSHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
1013b941877fSHong Zhang   /* do subdiagonal part */
1014b941877fSHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
1015b941877fSHong Zhang   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
1016b941877fSHong Zhang   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
101765d70643SHong Zhang 
1018a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1019a30f8f8cSSatish Balay }
1020a30f8f8cSSatish Balay 
10214a2ae208SSatish Balay #undef __FUNCT__
10224a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_MPISBAIJ"
1023a30f8f8cSSatish Balay int MatMultAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
1024a30f8f8cSSatish Balay {
1025de8b6608SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1026a9d4b620SHong Zhang   int          ierr,mbs=a->mbs,bs=a->bs;
1027a9d4b620SHong Zhang   PetscScalar  *x,*from,zero=0.0;
1028a9d4b620SHong Zhang 
1029a9d4b620SHong Zhang   PetscFunctionBegin;
1030a9d4b620SHong Zhang   /*
103156faa61eSBarry Smith   PetscSynchronizedPrintf(A->comm," MatMultAdd is called ...\n");
103256faa61eSBarry Smith   PetscSynchronizedFlush(A->comm);
1033a9d4b620SHong Zhang   */
1034a9d4b620SHong Zhang   /* diagonal part */
1035a9d4b620SHong Zhang   ierr = (*a->A->ops->multadd)(a->A,xx,yy,a->slvec1a);CHKERRQ(ierr);
1036a9d4b620SHong Zhang   ierr = VecSet(&zero,a->slvec1b);CHKERRQ(ierr);
1037a9d4b620SHong Zhang 
1038a9d4b620SHong Zhang   /* subdiagonal part */
1039a9d4b620SHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->slvec0b);CHKERRQ(ierr);
1040a9d4b620SHong Zhang 
1041a9d4b620SHong Zhang   /* copy x into the vec slvec0 */
1042b1d4fb26SBarry Smith   ierr = VecGetArrayFast(a->slvec0,&from);CHKERRQ(ierr);
1043b1d4fb26SBarry Smith   ierr = VecGetArrayFast(xx,&x);CHKERRQ(ierr);
1044a9d4b620SHong Zhang   ierr = PetscMemcpy(from,x,bs*mbs*sizeof(MatScalar));CHKERRQ(ierr);
1045b1d4fb26SBarry Smith   ierr = VecRestoreArrayFast(a->slvec0,&from);CHKERRQ(ierr);
1046a9d4b620SHong Zhang 
1047a9d4b620SHong Zhang   ierr = VecScatterBegin(a->slvec0,a->slvec1,ADD_VALUES,SCATTER_FORWARD,a->sMvctx);CHKERRQ(ierr);
1048b1d4fb26SBarry Smith   ierr = VecRestoreArrayFast(xx,&x);CHKERRQ(ierr);
1049a9d4b620SHong Zhang   ierr = VecScatterEnd(a->slvec0,a->slvec1,ADD_VALUES,SCATTER_FORWARD,a->sMvctx);CHKERRQ(ierr);
1050a9d4b620SHong Zhang 
1051a9d4b620SHong Zhang   /* supperdiagonal part */
1052a9d4b620SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->slvec1b,a->slvec1a,zz);CHKERRQ(ierr);
1053a9d4b620SHong Zhang 
1054a9d4b620SHong Zhang   PetscFunctionReturn(0);
1055a9d4b620SHong Zhang }
1056a9d4b620SHong Zhang 
1057a9d4b620SHong Zhang #undef __FUNCT__
1058a9d4b620SHong Zhang #define __FUNCT__ "MatMultAdd_MPISBAIJ_2comm"
1059a9d4b620SHong Zhang int MatMultAdd_MPISBAIJ_2comm(Mat A,Vec xx,Vec yy,Vec zz)
1060a9d4b620SHong Zhang {
1061a9d4b620SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1062aa482183SHong Zhang   int        ierr;
1063a30f8f8cSSatish Balay 
1064a30f8f8cSSatish Balay   PetscFunctionBegin;
1065b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1066b941877fSHong Zhang   /* do diagonal part */
1067b941877fSHong Zhang   ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
1068b941877fSHong Zhang   /* do supperdiagonal part */
1069b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1070de8b6608SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
1071de8b6608SHong Zhang 
1072b941877fSHong Zhang   /* do subdiagonal part */
1073a30f8f8cSSatish Balay   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
1074a30f8f8cSSatish Balay   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
1075a30f8f8cSSatish Balay   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
1076aa482183SHong Zhang 
1077a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1078a30f8f8cSSatish Balay }
1079a30f8f8cSSatish Balay 
10804a2ae208SSatish Balay #undef __FUNCT__
10814a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_MPISBAIJ"
1082a30f8f8cSSatish Balay int MatMultTranspose_MPISBAIJ(Mat A,Vec xx,Vec yy)
1083a30f8f8cSSatish Balay {
10845a7c0312SHong Zhang   int ierr;
10855a7c0312SHong Zhang 
1086a30f8f8cSSatish Balay   PetscFunctionBegin;
10875a7c0312SHong Zhang   ierr = MatMult(A,xx,yy);CHKERRQ(ierr);
10885a7c0312SHong Zhang   PetscFunctionReturn(0);
1089a30f8f8cSSatish Balay }
1090a30f8f8cSSatish Balay 
10914a2ae208SSatish Balay #undef __FUNCT__
10924a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_MPISBAIJ"
1093a30f8f8cSSatish Balay int MatMultTransposeAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
1094a30f8f8cSSatish Balay {
10955a7c0312SHong Zhang   int ierr;
10965a7c0312SHong Zhang 
1097a30f8f8cSSatish Balay   PetscFunctionBegin;
10985a7c0312SHong Zhang   ierr = MatMultAdd(A,xx,yy,zz);CHKERRQ(ierr);
10995a7c0312SHong Zhang   PetscFunctionReturn(0);
1100a30f8f8cSSatish Balay }
1101a30f8f8cSSatish Balay 
1102a30f8f8cSSatish Balay /*
1103a30f8f8cSSatish Balay   This only works correctly for square matrices where the subblock A->A is the
1104a30f8f8cSSatish Balay    diagonal block
1105a30f8f8cSSatish Balay */
11064a2ae208SSatish Balay #undef __FUNCT__
11074a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_MPISBAIJ"
1108a30f8f8cSSatish Balay int MatGetDiagonal_MPISBAIJ(Mat A,Vec v)
1109a30f8f8cSSatish Balay {
1110a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1111a30f8f8cSSatish Balay   int         ierr;
1112a30f8f8cSSatish Balay 
1113a30f8f8cSSatish Balay   PetscFunctionBegin;
111429bbc08cSBarry Smith   /* if (a->M != a->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block"); */
1115a30f8f8cSSatish Balay   ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
1116a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1117a30f8f8cSSatish Balay }
1118a30f8f8cSSatish Balay 
11194a2ae208SSatish Balay #undef __FUNCT__
11204a2ae208SSatish Balay #define __FUNCT__ "MatScale_MPISBAIJ"
1121268466fbSBarry Smith int MatScale_MPISBAIJ(const PetscScalar *aa,Mat A)
1122a30f8f8cSSatish Balay {
1123a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1124a30f8f8cSSatish Balay   int         ierr;
1125a30f8f8cSSatish Balay 
1126a30f8f8cSSatish Balay   PetscFunctionBegin;
1127a30f8f8cSSatish Balay   ierr = MatScale(aa,a->A);CHKERRQ(ierr);
1128a30f8f8cSSatish Balay   ierr = MatScale(aa,a->B);CHKERRQ(ierr);
1129a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1130a30f8f8cSSatish Balay }
1131a30f8f8cSSatish Balay 
11324a2ae208SSatish Balay #undef __FUNCT__
11334a2ae208SSatish Balay #define __FUNCT__ "MatGetRow_MPISBAIJ"
113487828ca2SBarry Smith int MatGetRow_MPISBAIJ(Mat matin,int row,int *nz,int **idx,PetscScalar **v)
1135a30f8f8cSSatish Balay {
1136a30f8f8cSSatish Balay   Mat_MPISBAIJ   *mat = (Mat_MPISBAIJ*)matin->data;
113787828ca2SBarry Smith   PetscScalar    *vworkA,*vworkB,**pvA,**pvB,*v_p;
1138a30f8f8cSSatish Balay   int            bs = mat->bs,bs2 = mat->bs2,i,ierr,*cworkA,*cworkB,**pcA,**pcB;
1139a30f8f8cSSatish Balay   int            nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
1140a30f8f8cSSatish Balay   int            *cmap,*idx_p,cstart = mat->cstart;
1141a30f8f8cSSatish Balay 
1142a30f8f8cSSatish Balay   PetscFunctionBegin;
114329bbc08cSBarry Smith   if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
1144a30f8f8cSSatish Balay   mat->getrowactive = PETSC_TRUE;
1145a30f8f8cSSatish Balay 
1146a30f8f8cSSatish Balay   if (!mat->rowvalues && (idx || v)) {
1147a30f8f8cSSatish Balay     /*
1148a30f8f8cSSatish Balay         allocate enough space to hold information from the longest row.
1149a30f8f8cSSatish Balay     */
1150a30f8f8cSSatish Balay     Mat_SeqSBAIJ *Aa = (Mat_SeqSBAIJ*)mat->A->data;
1151a30f8f8cSSatish Balay     Mat_SeqBAIJ  *Ba = (Mat_SeqBAIJ*)mat->B->data;
1152a30f8f8cSSatish Balay     int     max = 1,mbs = mat->mbs,tmp;
1153a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
1154a30f8f8cSSatish Balay       tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i]; /* row length */
1155a30f8f8cSSatish Balay       if (max < tmp) { max = tmp; }
1156a30f8f8cSSatish Balay     }
115787828ca2SBarry Smith     ierr = PetscMalloc(max*bs2*(sizeof(int)+sizeof(PetscScalar)),&mat->rowvalues);CHKERRQ(ierr);
1158a30f8f8cSSatish Balay     mat->rowindices = (int*)(mat->rowvalues + max*bs2);
1159a30f8f8cSSatish Balay   }
1160a30f8f8cSSatish Balay 
116129bbc08cSBarry Smith   if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
1162a30f8f8cSSatish Balay   lrow = row - brstart;  /* local row index */
1163a30f8f8cSSatish Balay 
1164a30f8f8cSSatish Balay   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1165a30f8f8cSSatish Balay   if (!v)   {pvA = 0; pvB = 0;}
1166a30f8f8cSSatish Balay   if (!idx) {pcA = 0; if (!v) pcB = 0;}
1167a30f8f8cSSatish Balay   ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1168a30f8f8cSSatish Balay   ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1169a30f8f8cSSatish Balay   nztot = nzA + nzB;
1170a30f8f8cSSatish Balay 
1171a30f8f8cSSatish Balay   cmap  = mat->garray;
1172a30f8f8cSSatish Balay   if (v  || idx) {
1173a30f8f8cSSatish Balay     if (nztot) {
1174a30f8f8cSSatish Balay       /* Sort by increasing column numbers, assuming A and B already sorted */
1175a30f8f8cSSatish Balay       int imark = -1;
1176a30f8f8cSSatish Balay       if (v) {
1177a30f8f8cSSatish Balay         *v = v_p = mat->rowvalues;
1178a30f8f8cSSatish Balay         for (i=0; i<nzB; i++) {
1179a30f8f8cSSatish Balay           if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
1180a30f8f8cSSatish Balay           else break;
1181a30f8f8cSSatish Balay         }
1182a30f8f8cSSatish Balay         imark = i;
1183a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
1184a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
1185a30f8f8cSSatish Balay       }
1186a30f8f8cSSatish Balay       if (idx) {
1187a30f8f8cSSatish Balay         *idx = idx_p = mat->rowindices;
1188a30f8f8cSSatish Balay         if (imark > -1) {
1189a30f8f8cSSatish Balay           for (i=0; i<imark; i++) {
1190a30f8f8cSSatish Balay             idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
1191a30f8f8cSSatish Balay           }
1192a30f8f8cSSatish Balay         } else {
1193a30f8f8cSSatish Balay           for (i=0; i<nzB; i++) {
1194a30f8f8cSSatish Balay             if (cmap[cworkB[i]/bs] < cstart)
1195a30f8f8cSSatish Balay               idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1196a30f8f8cSSatish Balay             else break;
1197a30f8f8cSSatish Balay           }
1198a30f8f8cSSatish Balay           imark = i;
1199a30f8f8cSSatish Balay         }
1200a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
1201a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1202a30f8f8cSSatish Balay       }
1203a30f8f8cSSatish Balay     } else {
1204a30f8f8cSSatish Balay       if (idx) *idx = 0;
1205a30f8f8cSSatish Balay       if (v)   *v   = 0;
1206a30f8f8cSSatish Balay     }
1207a30f8f8cSSatish Balay   }
1208a30f8f8cSSatish Balay   *nz = nztot;
1209a30f8f8cSSatish Balay   ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1210a30f8f8cSSatish Balay   ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1211a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1212a30f8f8cSSatish Balay }
1213a30f8f8cSSatish Balay 
12144a2ae208SSatish Balay #undef __FUNCT__
12154a2ae208SSatish Balay #define __FUNCT__ "MatRestoreRow_MPISBAIJ"
121687828ca2SBarry Smith int MatRestoreRow_MPISBAIJ(Mat mat,int row,int *nz,int **idx,PetscScalar **v)
1217a30f8f8cSSatish Balay {
1218a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1219a30f8f8cSSatish Balay 
1220a30f8f8cSSatish Balay   PetscFunctionBegin;
1221a30f8f8cSSatish Balay   if (baij->getrowactive == PETSC_FALSE) {
122229bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
1223a30f8f8cSSatish Balay   }
1224a30f8f8cSSatish Balay   baij->getrowactive = PETSC_FALSE;
1225a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1226a30f8f8cSSatish Balay }
1227a30f8f8cSSatish Balay 
12284a2ae208SSatish Balay #undef __FUNCT__
12294a2ae208SSatish Balay #define __FUNCT__ "MatGetBlockSize_MPISBAIJ"
1230a30f8f8cSSatish Balay int MatGetBlockSize_MPISBAIJ(Mat mat,int *bs)
1231a30f8f8cSSatish Balay {
1232a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1233a30f8f8cSSatish Balay 
1234a30f8f8cSSatish Balay   PetscFunctionBegin;
1235a30f8f8cSSatish Balay   *bs = baij->bs;
1236a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1237a30f8f8cSSatish Balay }
1238a30f8f8cSSatish Balay 
12394a2ae208SSatish Balay #undef __FUNCT__
12404a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_MPISBAIJ"
1241a30f8f8cSSatish Balay int MatZeroEntries_MPISBAIJ(Mat A)
1242a30f8f8cSSatish Balay {
1243a30f8f8cSSatish Balay   Mat_MPISBAIJ *l = (Mat_MPISBAIJ*)A->data;
1244a30f8f8cSSatish Balay   int         ierr;
1245a30f8f8cSSatish Balay 
1246a30f8f8cSSatish Balay   PetscFunctionBegin;
1247a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
1248a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
1249a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1250a30f8f8cSSatish Balay }
1251a30f8f8cSSatish Balay 
12524a2ae208SSatish Balay #undef __FUNCT__
12534a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_MPISBAIJ"
1254a30f8f8cSSatish Balay int MatGetInfo_MPISBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
1255a30f8f8cSSatish Balay {
1256a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)matin->data;
1257a30f8f8cSSatish Balay   Mat         A = a->A,B = a->B;
1258a30f8f8cSSatish Balay   int         ierr;
1259a30f8f8cSSatish Balay   PetscReal   isend[5],irecv[5];
1260a30f8f8cSSatish Balay 
1261a30f8f8cSSatish Balay   PetscFunctionBegin;
1262f6275e2eSBarry Smith   info->block_size     = (PetscReal)a->bs;
1263a30f8f8cSSatish Balay   ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
1264a30f8f8cSSatish Balay   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
1265a30f8f8cSSatish Balay   isend[3] = info->memory;  isend[4] = info->mallocs;
1266a30f8f8cSSatish Balay   ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
1267a30f8f8cSSatish Balay   isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
1268a30f8f8cSSatish Balay   isend[3] += info->memory;  isend[4] += info->mallocs;
1269a30f8f8cSSatish Balay   if (flag == MAT_LOCAL) {
1270a30f8f8cSSatish Balay     info->nz_used      = isend[0];
1271a30f8f8cSSatish Balay     info->nz_allocated = isend[1];
1272a30f8f8cSSatish Balay     info->nz_unneeded  = isend[2];
1273a30f8f8cSSatish Balay     info->memory       = isend[3];
1274a30f8f8cSSatish Balay     info->mallocs      = isend[4];
1275a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_MAX) {
1276d7d1e502SBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPI_MAX,matin->comm);CHKERRQ(ierr);
1277a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1278a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1279a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1280a30f8f8cSSatish Balay     info->memory       = irecv[3];
1281a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1282a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_SUM) {
1283d7d1e502SBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPI_SUM,matin->comm);CHKERRQ(ierr);
1284a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1285a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1286a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1287a30f8f8cSSatish Balay     info->memory       = irecv[3];
1288a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1289a30f8f8cSSatish Balay   } else {
129029bbc08cSBarry Smith     SETERRQ1(1,"Unknown MatInfoType argument %d",flag);
1291a30f8f8cSSatish Balay   }
1292f6275e2eSBarry Smith   info->rows_global       = (PetscReal)A->M;
1293f6275e2eSBarry Smith   info->columns_global    = (PetscReal)A->N;
1294f6275e2eSBarry Smith   info->rows_local        = (PetscReal)A->m;
1295f6275e2eSBarry Smith   info->columns_local     = (PetscReal)A->N;
1296a30f8f8cSSatish Balay   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
1297a30f8f8cSSatish Balay   info->fill_ratio_needed = 0;
1298a30f8f8cSSatish Balay   info->factor_mallocs    = 0;
1299a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1300a30f8f8cSSatish Balay }
1301a30f8f8cSSatish Balay 
13024a2ae208SSatish Balay #undef __FUNCT__
13034a2ae208SSatish Balay #define __FUNCT__ "MatSetOption_MPISBAIJ"
1304a30f8f8cSSatish Balay int MatSetOption_MPISBAIJ(Mat A,MatOption op)
1305a30f8f8cSSatish Balay {
1306a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1307a30f8f8cSSatish Balay   int         ierr;
1308a30f8f8cSSatish Balay 
1309a30f8f8cSSatish Balay   PetscFunctionBegin;
1310e98b92d7SKris Buschelman   switch (op) {
1311e98b92d7SKris Buschelman   case MAT_NO_NEW_NONZERO_LOCATIONS:
1312e98b92d7SKris Buschelman   case MAT_YES_NEW_NONZERO_LOCATIONS:
1313e98b92d7SKris Buschelman   case MAT_COLUMNS_UNSORTED:
1314e98b92d7SKris Buschelman   case MAT_COLUMNS_SORTED:
1315e98b92d7SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
1316e98b92d7SKris Buschelman   case MAT_KEEP_ZEROED_ROWS:
1317e98b92d7SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
1318a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1319a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1320e98b92d7SKris Buschelman     break;
1321e98b92d7SKris Buschelman   case MAT_ROW_ORIENTED:
1322a30f8f8cSSatish Balay     a->roworiented = PETSC_TRUE;
1323a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1324a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1325e98b92d7SKris Buschelman     break;
1326e98b92d7SKris Buschelman   case MAT_ROWS_SORTED:
1327e98b92d7SKris Buschelman   case MAT_ROWS_UNSORTED:
1328e98b92d7SKris Buschelman   case MAT_YES_NEW_DIAGONALS:
1329b0a32e0cSBarry Smith     PetscLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
1330e98b92d7SKris Buschelman     break;
1331e98b92d7SKris Buschelman   case MAT_COLUMN_ORIENTED:
1332a30f8f8cSSatish Balay     a->roworiented = PETSC_FALSE;
1333a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1334a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1335e98b92d7SKris Buschelman     break;
1336e98b92d7SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
1337a30f8f8cSSatish Balay     a->donotstash = PETSC_TRUE;
1338e98b92d7SKris Buschelman     break;
1339e98b92d7SKris Buschelman   case MAT_NO_NEW_DIAGONALS:
134029bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
1341e98b92d7SKris Buschelman   case MAT_USE_HASH_TABLE:
1342a30f8f8cSSatish Balay     a->ht_flag = PETSC_TRUE;
1343e98b92d7SKris Buschelman     break;
13449a4540c5SBarry Smith   case MAT_NOT_SYMMETRIC:
13459a4540c5SBarry Smith   case MAT_NOT_STRUCTURALLY_SYMMETRIC:
13469a4540c5SBarry Smith   case MAT_HERMITIAN:
13479a4540c5SBarry Smith     SETERRQ(PETSC_ERR_SUP,"Matrix must be symmetric");
134877e54ba9SKris Buschelman   case MAT_SYMMETRIC:
134977e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
13509a4540c5SBarry Smith   case MAT_NOT_HERMITIAN:
13519a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
13529a4540c5SBarry Smith   case MAT_NOT_SYMMETRY_ETERNAL:
135377e54ba9SKris Buschelman     break;
1354e98b92d7SKris Buschelman   default:
135529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"unknown option");
1356a30f8f8cSSatish Balay   }
1357a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1358a30f8f8cSSatish Balay }
1359a30f8f8cSSatish Balay 
13604a2ae208SSatish Balay #undef __FUNCT__
13618115998fSBarry Smith #define __FUNCT__ "MatTranspose_MPISBAIJ"
13628115998fSBarry Smith int MatTranspose_MPISBAIJ(Mat A,Mat *B)
1363a30f8f8cSSatish Balay {
13648115998fSBarry Smith   int ierr;
1365a30f8f8cSSatish Balay   PetscFunctionBegin;
1366999d9058SBarry Smith   ierr = MatDuplicate(A,MAT_COPY_VALUES,B);CHKERRQ(ierr);
13678115998fSBarry Smith   PetscFunctionReturn(0);
1368a30f8f8cSSatish Balay }
1369a30f8f8cSSatish Balay 
13704a2ae208SSatish Balay #undef __FUNCT__
13714a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_MPISBAIJ"
1372a30f8f8cSSatish Balay int MatDiagonalScale_MPISBAIJ(Mat mat,Vec ll,Vec rr)
1373a30f8f8cSSatish Balay {
1374a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1375a30f8f8cSSatish Balay   Mat         a = baij->A,b = baij->B;
1376a30f8f8cSSatish Balay   int         ierr,s1,s2,s3;
1377a30f8f8cSSatish Balay 
1378a30f8f8cSSatish Balay   PetscFunctionBegin;
1379a30f8f8cSSatish Balay   if (ll != rr) {
138029bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n");
1381a30f8f8cSSatish Balay   }
1382a30f8f8cSSatish Balay   ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
1383a30f8f8cSSatish Balay   if (rr) {
1384a30f8f8cSSatish Balay     ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
138529bbc08cSBarry Smith     if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
1386a30f8f8cSSatish Balay     /* Overlap communication with computation. */
1387a30f8f8cSSatish Balay     ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1388a30f8f8cSSatish Balay     /*} if (ll) { */
1389a30f8f8cSSatish Balay     ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
139029bbc08cSBarry Smith     if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
1391a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
1392a30f8f8cSSatish Balay     /* } */
1393a30f8f8cSSatish Balay   /* scale  the diagonal block */
1394a30f8f8cSSatish Balay   ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);
1395a30f8f8cSSatish Balay 
1396a30f8f8cSSatish Balay   /* if (rr) { */
1397a30f8f8cSSatish Balay     /* Do a scatter end and then right scale the off-diagonal block */
1398a30f8f8cSSatish Balay     ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1399a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
1400a30f8f8cSSatish Balay   }
1401a30f8f8cSSatish Balay 
1402a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1403a30f8f8cSSatish Balay }
1404a30f8f8cSSatish Balay 
14054a2ae208SSatish Balay #undef __FUNCT__
14064a2ae208SSatish Balay #define __FUNCT__ "MatZeroRows_MPISBAIJ"
1407268466fbSBarry Smith int MatZeroRows_MPISBAIJ(Mat A,IS is,const PetscScalar *diag)
1408a30f8f8cSSatish Balay {
1409a30f8f8cSSatish Balay   PetscFunctionBegin;
1410c0f24835SHong Zhang   SETERRQ(PETSC_ERR_SUP,"No support for this function yet");
1411a30f8f8cSSatish Balay }
1412a30f8f8cSSatish Balay 
14134a2ae208SSatish Balay #undef __FUNCT__
14144a2ae208SSatish Balay #define __FUNCT__ "MatPrintHelp_MPISBAIJ"
1415a30f8f8cSSatish Balay int MatPrintHelp_MPISBAIJ(Mat A)
1416a30f8f8cSSatish Balay {
1417a30f8f8cSSatish Balay   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1418a30f8f8cSSatish Balay   MPI_Comm    comm = A->comm;
1419a30f8f8cSSatish Balay   static int  called = 0;
1420a30f8f8cSSatish Balay   int         ierr;
1421a30f8f8cSSatish Balay 
1422a30f8f8cSSatish Balay   PetscFunctionBegin;
1423a30f8f8cSSatish Balay   if (!a->rank) {
1424a30f8f8cSSatish Balay     ierr = MatPrintHelp_SeqSBAIJ(a->A);CHKERRQ(ierr);
1425a30f8f8cSSatish Balay   }
1426a30f8f8cSSatish Balay   if (called) {PetscFunctionReturn(0);} else called = 1;
1427a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm," Options for MATMPISBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
1428a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
1429a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1430a30f8f8cSSatish Balay }
1431a30f8f8cSSatish Balay 
14324a2ae208SSatish Balay #undef __FUNCT__
14334a2ae208SSatish Balay #define __FUNCT__ "MatSetUnfactored_MPISBAIJ"
1434a30f8f8cSSatish Balay int MatSetUnfactored_MPISBAIJ(Mat A)
1435a30f8f8cSSatish Balay {
1436f3566a2aSHong Zhang   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1437a30f8f8cSSatish Balay   int         ierr;
1438a30f8f8cSSatish Balay 
1439a30f8f8cSSatish Balay   PetscFunctionBegin;
1440a30f8f8cSSatish Balay   ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
1441a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1442a30f8f8cSSatish Balay }
1443a30f8f8cSSatish Balay 
1444a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat,MatDuplicateOption,Mat *);
1445a30f8f8cSSatish Balay 
14464a2ae208SSatish Balay #undef __FUNCT__
14474a2ae208SSatish Balay #define __FUNCT__ "MatEqual_MPISBAIJ"
1448a30f8f8cSSatish Balay int MatEqual_MPISBAIJ(Mat A,Mat B,PetscTruth *flag)
1449a30f8f8cSSatish Balay {
1450a30f8f8cSSatish Balay   Mat_MPISBAIJ *matB = (Mat_MPISBAIJ*)B->data,*matA = (Mat_MPISBAIJ*)A->data;
1451a30f8f8cSSatish Balay   Mat         a,b,c,d;
1452a30f8f8cSSatish Balay   PetscTruth  flg;
1453a30f8f8cSSatish Balay   int         ierr;
1454a30f8f8cSSatish Balay 
1455a30f8f8cSSatish Balay   PetscFunctionBegin;
1456a30f8f8cSSatish Balay   a = matA->A; b = matA->B;
1457a30f8f8cSSatish Balay   c = matB->A; d = matB->B;
1458a30f8f8cSSatish Balay 
1459a30f8f8cSSatish Balay   ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
1460a30f8f8cSSatish Balay   if (flg == PETSC_TRUE) {
1461a30f8f8cSSatish Balay     ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
1462a30f8f8cSSatish Balay   }
1463a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
1464a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1465a30f8f8cSSatish Balay }
1466a30f8f8cSSatish Balay 
14674a2ae208SSatish Balay #undef __FUNCT__
14684a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation_MPISBAIJ"
1469273d9f13SBarry Smith int MatSetUpPreallocation_MPISBAIJ(Mat A)
1470273d9f13SBarry Smith {
1471273d9f13SBarry Smith   int        ierr;
1472273d9f13SBarry Smith 
1473273d9f13SBarry Smith   PetscFunctionBegin;
1474273d9f13SBarry Smith   ierr = MatMPISBAIJSetPreallocation(A,1,PETSC_DEFAULT,0,PETSC_DEFAULT,0);CHKERRQ(ierr);
1475273d9f13SBarry Smith   PetscFunctionReturn(0);
1476273d9f13SBarry Smith }
1477a5e6ed63SBarry Smith 
1478a5e6ed63SBarry Smith #undef __FUNCT__
1479a5e6ed63SBarry Smith #define __FUNCT__ "MatGetSubMatrices_MPISBAIJ"
1480a5e6ed63SBarry Smith int MatGetSubMatrices_MPISBAIJ(Mat A,int n,const IS irow[],const IS icol[],MatReuse scall,Mat *B[])
1481a5e6ed63SBarry Smith {
1482a5e6ed63SBarry Smith   int        i,ierr;
1483a5e6ed63SBarry Smith   PetscTruth flg;
1484a5e6ed63SBarry Smith 
1485a5e6ed63SBarry Smith   for (i=0; i<n; i++) {
1486a5e6ed63SBarry Smith     ierr = ISEqual(irow[i],icol[i],&flg);CHKERRQ(ierr);
1487a5e6ed63SBarry Smith     if (!flg) {
1488a5e6ed63SBarry Smith       SETERRQ(1,"Can only get symmetric submatrix for MPISBAIJ matrices");
1489a5e6ed63SBarry Smith     }
1490a5e6ed63SBarry Smith   }
1491a5e6ed63SBarry Smith   ierr = MatGetSubMatrices_MPIBAIJ(A,n,irow,icol,scall,B);CHKERRQ(ierr);
1492a5e6ed63SBarry Smith   PetscFunctionReturn(0);
1493a5e6ed63SBarry Smith }
1494a5e6ed63SBarry Smith 
1495a5e6ed63SBarry Smith 
1496a30f8f8cSSatish Balay /* -------------------------------------------------------------------*/
1497a30f8f8cSSatish Balay static struct _MatOps MatOps_Values = {
1498a30f8f8cSSatish Balay        MatSetValues_MPISBAIJ,
1499a30f8f8cSSatish Balay        MatGetRow_MPISBAIJ,
1500a30f8f8cSSatish Balay        MatRestoreRow_MPISBAIJ,
1501a9d4b620SHong Zhang        MatMult_MPISBAIJ,
150297304618SKris Buschelman /* 4*/ MatMultAdd_MPISBAIJ,
1503a30f8f8cSSatish Balay        MatMultTranspose_MPISBAIJ,
1504a30f8f8cSSatish Balay        MatMultTransposeAdd_MPISBAIJ,
1505a30f8f8cSSatish Balay        0,
1506a30f8f8cSSatish Balay        0,
1507a30f8f8cSSatish Balay        0,
150897304618SKris Buschelman /*10*/ 0,
1509a30f8f8cSSatish Balay        0,
1510a30f8f8cSSatish Balay        0,
15112798e883SHong Zhang        MatRelax_MPISBAIJ,
1512a30f8f8cSSatish Balay        MatTranspose_MPISBAIJ,
151397304618SKris Buschelman /*15*/ MatGetInfo_MPISBAIJ,
1514a30f8f8cSSatish Balay        MatEqual_MPISBAIJ,
1515a30f8f8cSSatish Balay        MatGetDiagonal_MPISBAIJ,
1516a30f8f8cSSatish Balay        MatDiagonalScale_MPISBAIJ,
1517a30f8f8cSSatish Balay        MatNorm_MPISBAIJ,
151897304618SKris Buschelman /*20*/ MatAssemblyBegin_MPISBAIJ,
1519a30f8f8cSSatish Balay        MatAssemblyEnd_MPISBAIJ,
1520a30f8f8cSSatish Balay        0,
1521a30f8f8cSSatish Balay        MatSetOption_MPISBAIJ,
1522a30f8f8cSSatish Balay        MatZeroEntries_MPISBAIJ,
152397304618SKris Buschelman /*25*/ MatZeroRows_MPISBAIJ,
1524a30f8f8cSSatish Balay        0,
1525a30f8f8cSSatish Balay        0,
1526a30f8f8cSSatish Balay        0,
1527a30f8f8cSSatish Balay        0,
152897304618SKris Buschelman /*30*/ MatSetUpPreallocation_MPISBAIJ,
1529b5df2d14SHong Zhang        0,
1530a30f8f8cSSatish Balay        0,
1531a30f8f8cSSatish Balay        0,
1532a30f8f8cSSatish Balay        0,
153397304618SKris Buschelman /*35*/ MatDuplicate_MPISBAIJ,
1534a30f8f8cSSatish Balay        0,
1535a30f8f8cSSatish Balay        0,
1536a30f8f8cSSatish Balay        0,
1537a30f8f8cSSatish Balay        0,
153897304618SKris Buschelman /*40*/ 0,
1539a5e6ed63SBarry Smith        MatGetSubMatrices_MPISBAIJ,
1540d94109b8SHong Zhang        MatIncreaseOverlap_MPISBAIJ,
1541a30f8f8cSSatish Balay        MatGetValues_MPISBAIJ,
1542a30f8f8cSSatish Balay        0,
154397304618SKris Buschelman /*45*/ MatPrintHelp_MPISBAIJ,
1544a30f8f8cSSatish Balay        MatScale_MPISBAIJ,
1545a30f8f8cSSatish Balay        0,
1546a30f8f8cSSatish Balay        0,
1547a30f8f8cSSatish Balay        0,
154897304618SKris Buschelman /*50*/ MatGetBlockSize_MPISBAIJ,
1549a30f8f8cSSatish Balay        0,
1550a30f8f8cSSatish Balay        0,
1551a30f8f8cSSatish Balay        0,
1552a30f8f8cSSatish Balay        0,
155397304618SKris Buschelman /*55*/ 0,
1554a30f8f8cSSatish Balay        0,
1555a30f8f8cSSatish Balay        MatSetUnfactored_MPISBAIJ,
1556a30f8f8cSSatish Balay        0,
1557a30f8f8cSSatish Balay        MatSetValuesBlocked_MPISBAIJ,
155897304618SKris Buschelman /*60*/ 0,
1559a30f8f8cSSatish Balay        0,
1560a30f8f8cSSatish Balay        0,
15618a124369SBarry Smith        MatGetPetscMaps_Petsc,
156224d5174aSHong Zhang        0,
156397304618SKris Buschelman /*65*/ 0,
156424d5174aSHong Zhang        0,
156524d5174aSHong Zhang        0,
156624d5174aSHong Zhang        0,
156724d5174aSHong Zhang        0,
156897304618SKris Buschelman /*70*/ MatGetRowMax_MPISBAIJ,
156924d5174aSHong Zhang        0,
157097304618SKris Buschelman        0,
157197304618SKris Buschelman        0,
157297304618SKris Buschelman        0,
157397304618SKris Buschelman /*75*/ 0,
157497304618SKris Buschelman        0,
157597304618SKris Buschelman        0,
157697304618SKris Buschelman        0,
157797304618SKris Buschelman        0,
157897304618SKris Buschelman /*80*/ 0,
157997304618SKris Buschelman        0,
158097304618SKris Buschelman        0,
158197304618SKris Buschelman        0,
158297304618SKris Buschelman /*85*/ MatLoad_MPISBAIJ
158397304618SKris Buschelman };
1584a30f8f8cSSatish Balay 
1585a30f8f8cSSatish Balay 
1586a30f8f8cSSatish Balay EXTERN_C_BEGIN
15874a2ae208SSatish Balay #undef __FUNCT__
15884a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonalBlock_MPISBAIJ"
1589a30f8f8cSSatish Balay int MatGetDiagonalBlock_MPISBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
1590a30f8f8cSSatish Balay {
1591a30f8f8cSSatish Balay   PetscFunctionBegin;
1592a30f8f8cSSatish Balay   *a      = ((Mat_MPISBAIJ *)A->data)->A;
1593a30f8f8cSSatish Balay   *iscopy = PETSC_FALSE;
1594a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1595a30f8f8cSSatish Balay }
1596a30f8f8cSSatish Balay EXTERN_C_END
1597a30f8f8cSSatish Balay 
1598273d9f13SBarry Smith EXTERN_C_BEGIN
15994a2ae208SSatish Balay #undef __FUNCT__
1600a23d5eceSKris Buschelman #define __FUNCT__ "MatMPISBAIJSetPreallocation_MPISBAIJ"
1601a23d5eceSKris Buschelman int MatMPISBAIJSetPreallocation_MPISBAIJ(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz)
1602a23d5eceSKris Buschelman {
1603a23d5eceSKris Buschelman   Mat_MPISBAIJ *b;
1604a23d5eceSKris Buschelman   int          ierr,i,mbs,Mbs;
1605a23d5eceSKris Buschelman 
1606a23d5eceSKris Buschelman   PetscFunctionBegin;
1607a23d5eceSKris Buschelman   ierr = PetscOptionsGetInt(B->prefix,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1608a23d5eceSKris Buschelman 
1609a23d5eceSKris Buschelman   if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
1610a23d5eceSKris Buschelman   if (d_nz == PETSC_DECIDE || d_nz == PETSC_DEFAULT) d_nz = 3;
1611a23d5eceSKris Buschelman   if (o_nz == PETSC_DECIDE || o_nz == PETSC_DEFAULT) o_nz = 1;
1612a23d5eceSKris Buschelman   if (d_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than 0: value %d",d_nz);
1613a23d5eceSKris Buschelman   if (o_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than 0: value %d",o_nz);
1614a23d5eceSKris Buschelman   if (d_nnz) {
1615a23d5eceSKris Buschelman     for (i=0; i<B->m/bs; i++) {
1616a23d5eceSKris Buschelman       if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %d value %d",i,d_nnz[i]);
1617a23d5eceSKris Buschelman     }
1618a23d5eceSKris Buschelman   }
1619a23d5eceSKris Buschelman   if (o_nnz) {
1620a23d5eceSKris Buschelman     for (i=0; i<B->m/bs; i++) {
1621a23d5eceSKris Buschelman       if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %d value %d",i,o_nnz[i]);
1622a23d5eceSKris Buschelman     }
1623a23d5eceSKris Buschelman   }
1624a23d5eceSKris Buschelman   B->preallocated = PETSC_TRUE;
1625a23d5eceSKris Buschelman   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->m,&B->M);CHKERRQ(ierr);
1626a23d5eceSKris Buschelman   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->n,&B->N);CHKERRQ(ierr);
1627a23d5eceSKris Buschelman   ierr = PetscMapCreateMPI(B->comm,B->m,B->M,&B->rmap);CHKERRQ(ierr);
1628a23d5eceSKris Buschelman   ierr = PetscMapCreateMPI(B->comm,B->m,B->M,&B->cmap);CHKERRQ(ierr);
1629a23d5eceSKris Buschelman 
1630a23d5eceSKris Buschelman   b   = (Mat_MPISBAIJ*)B->data;
1631a23d5eceSKris Buschelman   mbs = B->m/bs;
1632a23d5eceSKris Buschelman   Mbs = B->M/bs;
1633a23d5eceSKris Buschelman   if (mbs*bs != B->m) {
1634a23d5eceSKris Buschelman     SETERRQ2(PETSC_ERR_ARG_SIZ,"No of local rows %d must be divisible by blocksize %d",B->m,bs);
1635a23d5eceSKris Buschelman   }
1636a23d5eceSKris Buschelman 
1637a23d5eceSKris Buschelman   b->bs  = bs;
1638a23d5eceSKris Buschelman   b->bs2 = bs*bs;
1639a23d5eceSKris Buschelman   b->mbs = mbs;
1640a23d5eceSKris Buschelman   b->nbs = mbs;
1641a23d5eceSKris Buschelman   b->Mbs = Mbs;
1642a23d5eceSKris Buschelman   b->Nbs = Mbs;
1643a23d5eceSKris Buschelman 
1644a23d5eceSKris Buschelman   ierr = MPI_Allgather(&b->mbs,1,MPI_INT,b->rowners+1,1,MPI_INT,B->comm);CHKERRQ(ierr);
1645a23d5eceSKris Buschelman   b->rowners[0]    = 0;
1646a23d5eceSKris Buschelman   for (i=2; i<=b->size; i++) {
1647a23d5eceSKris Buschelman     b->rowners[i] += b->rowners[i-1];
1648a23d5eceSKris Buschelman   }
1649a23d5eceSKris Buschelman   b->rstart    = b->rowners[b->rank];
1650a23d5eceSKris Buschelman   b->rend      = b->rowners[b->rank+1];
1651a23d5eceSKris Buschelman   b->cstart    = b->rstart;
1652a23d5eceSKris Buschelman   b->cend      = b->rend;
1653a23d5eceSKris Buschelman   for (i=0; i<=b->size; i++) {
1654a23d5eceSKris Buschelman     b->rowners_bs[i] = b->rowners[i]*bs;
1655a23d5eceSKris Buschelman   }
1656a23d5eceSKris Buschelman   b->rstart_bs = b-> rstart*bs;
1657a23d5eceSKris Buschelman   b->rend_bs   = b->rend*bs;
1658a23d5eceSKris Buschelman 
1659a23d5eceSKris Buschelman   b->cstart_bs = b->cstart*bs;
1660a23d5eceSKris Buschelman   b->cend_bs   = b->cend*bs;
1661a23d5eceSKris Buschelman 
16629c097c71SKris Buschelman   ierr = MatCreate(PETSC_COMM_SELF,B->m,B->m,B->m,B->m,&b->A);CHKERRQ(ierr);
16639c097c71SKris Buschelman   ierr = MatSetType(b->A,MATSEQSBAIJ);CHKERRQ(ierr);
1664c60e587dSKris Buschelman   ierr = MatSeqSBAIJSetPreallocation(b->A,bs,d_nz,d_nnz);CHKERRQ(ierr);
16659c097c71SKris Buschelman   PetscLogObjectParent(B,b->A);
16669c097c71SKris Buschelman 
16679c097c71SKris Buschelman   ierr = MatCreate(PETSC_COMM_SELF,B->m,B->M,B->m,B->M,&b->B);CHKERRQ(ierr);
16684aea0f9eSHong Zhang   ierr = MatSetType(b->B,MATSEQBAIJ);CHKERRQ(ierr);
1669589264c8SKris Buschelman   ierr = MatSeqBAIJSetPreallocation(b->B,bs,o_nz,o_nnz);CHKERRQ(ierr);
16709c097c71SKris Buschelman   PetscLogObjectParent(B,b->B);
1671a23d5eceSKris Buschelman 
1672a23d5eceSKris Buschelman   /* build cache for off array entries formed */
1673a23d5eceSKris Buschelman   ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);
1674a23d5eceSKris Buschelman 
1675a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1676a23d5eceSKris Buschelman }
1677a23d5eceSKris Buschelman EXTERN_C_END
1678a23d5eceSKris Buschelman 
16790bad9183SKris Buschelman /*MC
1680fafad747SKris Buschelman    MATMPISBAIJ - MATMPISBAIJ = "mpisbaij" - A matrix type to be used for distributed symmetric sparse block matrices,
16810bad9183SKris Buschelman    based on block compressed sparse row format.  Only the upper triangular portion of the matrix is stored.
16820bad9183SKris Buschelman 
16830bad9183SKris Buschelman    Options Database Keys:
16840bad9183SKris Buschelman . -mat_type mpisbaij - sets the matrix type to "mpisbaij" during a call to MatSetFromOptions()
16850bad9183SKris Buschelman 
16860bad9183SKris Buschelman   Level: beginner
16870bad9183SKris Buschelman 
16880bad9183SKris Buschelman .seealso: MatCreateMPISBAIJ
16890bad9183SKris Buschelman M*/
16900bad9183SKris Buschelman 
1691a23d5eceSKris Buschelman EXTERN_C_BEGIN
1692a23d5eceSKris Buschelman #undef __FUNCT__
16934a2ae208SSatish Balay #define __FUNCT__ "MatCreate_MPISBAIJ"
1694b5df2d14SHong Zhang int MatCreate_MPISBAIJ(Mat B)
1695b5df2d14SHong Zhang {
1696b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1697ca54ac64SHong Zhang   int          ierr;
1698b5df2d14SHong Zhang   PetscTruth   flg;
1699b5df2d14SHong Zhang 
1700b5df2d14SHong Zhang   PetscFunctionBegin;
1701b5df2d14SHong Zhang 
1702b0a32e0cSBarry Smith   ierr    = PetscNew(Mat_MPISBAIJ,&b);CHKERRQ(ierr);
1703b0a32e0cSBarry Smith   B->data = (void*)b;
1704b5df2d14SHong Zhang   ierr    = PetscMemzero(b,sizeof(Mat_MPISBAIJ));CHKERRQ(ierr);
1705b5df2d14SHong Zhang   ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1706b5df2d14SHong Zhang 
1707b5df2d14SHong Zhang   B->ops->destroy    = MatDestroy_MPISBAIJ;
1708b5df2d14SHong Zhang   B->ops->view       = MatView_MPISBAIJ;
1709b5df2d14SHong Zhang   B->mapping    = 0;
1710b5df2d14SHong Zhang   B->factor     = 0;
1711b5df2d14SHong Zhang   B->assembled  = PETSC_FALSE;
1712b5df2d14SHong Zhang 
1713b5df2d14SHong Zhang   B->insertmode = NOT_SET_VALUES;
1714b5df2d14SHong Zhang   ierr = MPI_Comm_rank(B->comm,&b->rank);CHKERRQ(ierr);
1715b5df2d14SHong Zhang   ierr = MPI_Comm_size(B->comm,&b->size);CHKERRQ(ierr);
1716b5df2d14SHong Zhang 
1717b5df2d14SHong Zhang   /* build local table of row and column ownerships */
171882502324SSatish Balay   ierr          = PetscMalloc(3*(b->size+2)*sizeof(int),&b->rowners);CHKERRQ(ierr);
1719273d9f13SBarry Smith   b->cowners    = b->rowners + b->size + 2;
1720273d9f13SBarry Smith   b->rowners_bs = b->cowners + b->size + 2;
1721b0a32e0cSBarry Smith   PetscLogObjectMemory(B,3*(b->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1722b5df2d14SHong Zhang 
1723b5df2d14SHong Zhang   /* build cache for off array entries formed */
1724b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
1725b5df2d14SHong Zhang   b->donotstash  = PETSC_FALSE;
1726b5df2d14SHong Zhang   b->colmap      = PETSC_NULL;
1727b5df2d14SHong Zhang   b->garray      = PETSC_NULL;
1728b5df2d14SHong Zhang   b->roworiented = PETSC_TRUE;
1729b5df2d14SHong Zhang 
1730f2a5309cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
1731b5df2d14SHong Zhang   /* stuff for MatSetValues_XXX in single precision */
173264a35ccbSBarry Smith   b->setvalueslen     = 0;
1733b5df2d14SHong Zhang   b->setvaluescopy    = PETSC_NULL;
1734b5df2d14SHong Zhang #endif
1735b5df2d14SHong Zhang 
1736b5df2d14SHong Zhang   /* stuff used in block assembly */
1737b5df2d14SHong Zhang   b->barray       = 0;
1738b5df2d14SHong Zhang 
1739b5df2d14SHong Zhang   /* stuff used for matrix vector multiply */
1740b5df2d14SHong Zhang   b->lvec         = 0;
1741b5df2d14SHong Zhang   b->Mvctx        = 0;
174240781036SHong Zhang   b->slvec0       = 0;
174340781036SHong Zhang   b->slvec0b      = 0;
174440781036SHong Zhang   b->slvec1       = 0;
174540781036SHong Zhang   b->slvec1a      = 0;
174640781036SHong Zhang   b->slvec1b      = 0;
174740781036SHong Zhang   b->sMvctx       = 0;
1748b5df2d14SHong Zhang 
1749b5df2d14SHong Zhang   /* stuff for MatGetRow() */
1750b5df2d14SHong Zhang   b->rowindices   = 0;
1751b5df2d14SHong Zhang   b->rowvalues    = 0;
1752b5df2d14SHong Zhang   b->getrowactive = PETSC_FALSE;
1753b5df2d14SHong Zhang 
1754b5df2d14SHong Zhang   /* hash table stuff */
1755b5df2d14SHong Zhang   b->ht           = 0;
1756b5df2d14SHong Zhang   b->hd           = 0;
1757b5df2d14SHong Zhang   b->ht_size      = 0;
1758b5df2d14SHong Zhang   b->ht_flag      = PETSC_FALSE;
1759b5df2d14SHong Zhang   b->ht_fact      = 0;
1760b5df2d14SHong Zhang   b->ht_total_ct  = 0;
1761b5df2d14SHong Zhang   b->ht_insert_ct = 0;
1762b5df2d14SHong Zhang 
1763e82a3eeeSBarry Smith   ierr = PetscOptionsHasName(B->prefix,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
1764b5df2d14SHong Zhang   if (flg) {
1765f6275e2eSBarry Smith     PetscReal fact = 1.39;
1766b5df2d14SHong Zhang     ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
1767e82a3eeeSBarry Smith     ierr = PetscOptionsGetReal(B->prefix,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
1768b5df2d14SHong Zhang     if (fact <= 1.0) fact = 1.39;
1769b5df2d14SHong Zhang     ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
1770b0a32e0cSBarry Smith     PetscLogInfo(0,"MatCreateMPISBAIJ:Hash table Factor used %5.2f\n",fact);
1771b5df2d14SHong Zhang   }
1772b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
1773b5df2d14SHong Zhang                                      "MatStoreValues_MPISBAIJ",
1774b5df2d14SHong Zhang                                      MatStoreValues_MPISBAIJ);CHKERRQ(ierr);
1775b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
1776b5df2d14SHong Zhang                                      "MatRetrieveValues_MPISBAIJ",
1777b5df2d14SHong Zhang                                      MatRetrieveValues_MPISBAIJ);CHKERRQ(ierr);
1778b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
1779b5df2d14SHong Zhang                                      "MatGetDiagonalBlock_MPISBAIJ",
1780b5df2d14SHong Zhang                                      MatGetDiagonalBlock_MPISBAIJ);CHKERRQ(ierr);
1781a23d5eceSKris Buschelman   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatMPISBAIJSetPreallocation_C",
1782a23d5eceSKris Buschelman                                      "MatMPISBAIJSetPreallocation_MPISBAIJ",
1783a23d5eceSKris Buschelman                                      MatMPISBAIJSetPreallocation_MPISBAIJ);CHKERRQ(ierr);
1784b5df2d14SHong Zhang   PetscFunctionReturn(0);
1785b5df2d14SHong Zhang }
1786273d9f13SBarry Smith EXTERN_C_END
1787b5df2d14SHong Zhang 
1788209238afSKris Buschelman /*MC
1789002d173eSKris Buschelman    MATSBAIJ - MATSBAIJ = "sbaij" - A matrix type to be used for symmetric block sparse matrices.
1790209238afSKris Buschelman 
1791209238afSKris Buschelman    This matrix type is identical to MATSEQSBAIJ when constructed with a single process communicator,
1792209238afSKris Buschelman    and MATMPISBAIJ otherwise.
1793209238afSKris Buschelman 
1794209238afSKris Buschelman    Options Database Keys:
1795209238afSKris Buschelman . -mat_type sbaij - sets the matrix type to "sbaij" during a call to MatSetFromOptions()
1796209238afSKris Buschelman 
1797209238afSKris Buschelman   Level: beginner
1798209238afSKris Buschelman 
1799209238afSKris Buschelman .seealso: MatCreateMPISBAIJ,MATSEQSBAIJ,MATMPISBAIJ
1800209238afSKris Buschelman M*/
1801209238afSKris Buschelman 
1802209238afSKris Buschelman EXTERN_C_BEGIN
1803209238afSKris Buschelman #undef __FUNCT__
1804209238afSKris Buschelman #define __FUNCT__ "MatCreate_SBAIJ"
1805209238afSKris Buschelman int MatCreate_SBAIJ(Mat A) {
1806209238afSKris Buschelman   int ierr,size;
1807209238afSKris Buschelman 
1808209238afSKris Buschelman   PetscFunctionBegin;
1809209238afSKris Buschelman   ierr = PetscObjectChangeTypeName((PetscObject)A,MATSBAIJ);CHKERRQ(ierr);
1810209238afSKris Buschelman   ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr);
1811209238afSKris Buschelman   if (size == 1) {
1812209238afSKris Buschelman     ierr = MatSetType(A,MATSEQSBAIJ);CHKERRQ(ierr);
1813209238afSKris Buschelman   } else {
1814209238afSKris Buschelman     ierr = MatSetType(A,MATMPISBAIJ);CHKERRQ(ierr);
1815209238afSKris Buschelman   }
1816209238afSKris Buschelman   PetscFunctionReturn(0);
1817209238afSKris Buschelman }
1818209238afSKris Buschelman EXTERN_C_END
1819209238afSKris Buschelman 
18204a2ae208SSatish Balay #undef __FUNCT__
18214a2ae208SSatish Balay #define __FUNCT__ "MatMPISBAIJSetPreallocation"
1822b5df2d14SHong Zhang /*@C
1823b5df2d14SHong Zhang    MatMPISBAIJSetPreallocation - For good matrix assembly performance
1824b5df2d14SHong Zhang    the user should preallocate the matrix storage by setting the parameters
1825b5df2d14SHong Zhang    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1826b5df2d14SHong Zhang    performance can be increased by more than a factor of 50.
1827b5df2d14SHong Zhang 
1828b5df2d14SHong Zhang    Collective on Mat
1829b5df2d14SHong Zhang 
1830b5df2d14SHong Zhang    Input Parameters:
1831b5df2d14SHong Zhang +  A - the matrix
1832b5df2d14SHong Zhang .  bs   - size of blockk
1833b5df2d14SHong Zhang .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1834b5df2d14SHong Zhang            submatrix  (same for all local rows)
1835b5df2d14SHong Zhang .  d_nnz - array containing the number of block nonzeros in the various block rows
18366d10fdaeSSatish Balay            in the upper triangular and diagonal part of the in diagonal portion of the local
18376d10fdaeSSatish Balay            (possibly different for each block row) or PETSC_NULL.  You must leave room
18386d10fdaeSSatish Balay            for the diagonal entry even if it is zero.
1839b5df2d14SHong Zhang .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1840b5df2d14SHong Zhang            submatrix (same for all local rows).
1841b5df2d14SHong Zhang -  o_nnz - array containing the number of nonzeros in the various block rows of the
1842b5df2d14SHong Zhang            off-diagonal portion of the local submatrix (possibly different for
1843b5df2d14SHong Zhang            each block row) or PETSC_NULL.
1844b5df2d14SHong Zhang 
1845b5df2d14SHong Zhang 
1846b5df2d14SHong Zhang    Options Database Keys:
1847b5df2d14SHong Zhang .   -mat_no_unroll - uses code that does not unroll the loops in the
1848b5df2d14SHong Zhang                      block calculations (much slower)
1849b5df2d14SHong Zhang .   -mat_block_size - size of the blocks to use
1850b5df2d14SHong Zhang 
1851b5df2d14SHong Zhang    Notes:
1852b5df2d14SHong Zhang 
1853b5df2d14SHong Zhang    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1854b5df2d14SHong Zhang    than it must be used on all processors that share the object for that argument.
1855b5df2d14SHong Zhang 
1856b5df2d14SHong Zhang    Storage Information:
1857b5df2d14SHong Zhang    For a square global matrix we define each processor's diagonal portion
1858b5df2d14SHong Zhang    to be its local rows and the corresponding columns (a square submatrix);
1859b5df2d14SHong Zhang    each processor's off-diagonal portion encompasses the remainder of the
1860b5df2d14SHong Zhang    local matrix (a rectangular submatrix).
1861b5df2d14SHong Zhang 
1862b5df2d14SHong Zhang    The user can specify preallocated storage for the diagonal part of
1863b5df2d14SHong Zhang    the local submatrix with either d_nz or d_nnz (not both).  Set
1864b5df2d14SHong Zhang    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1865b5df2d14SHong Zhang    memory allocation.  Likewise, specify preallocated storage for the
1866b5df2d14SHong Zhang    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1867b5df2d14SHong Zhang 
1868b5df2d14SHong Zhang    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1869b5df2d14SHong Zhang    the figure below we depict these three local rows and all columns (0-11).
1870b5df2d14SHong Zhang 
1871b5df2d14SHong Zhang .vb
1872b5df2d14SHong Zhang            0 1 2 3 4 5 6 7 8 9 10 11
1873b5df2d14SHong Zhang           -------------------
1874b5df2d14SHong Zhang    row 3  |  o o o d d d o o o o o o
1875b5df2d14SHong Zhang    row 4  |  o o o d d d o o o o o o
1876b5df2d14SHong Zhang    row 5  |  o o o d d d o o o o o o
1877b5df2d14SHong Zhang           -------------------
1878b5df2d14SHong Zhang .ve
1879b5df2d14SHong Zhang 
1880b5df2d14SHong Zhang    Thus, any entries in the d locations are stored in the d (diagonal)
1881b5df2d14SHong Zhang    submatrix, and any entries in the o locations are stored in the
18826d10fdaeSSatish Balay    o (off-diagonal) submatrix.  Note that the d matrix is stored in
18836d10fdaeSSatish Balay    MatSeqSBAIJ format and the o submatrix in MATSEQBAIJ format.
1884b5df2d14SHong Zhang 
18856d10fdaeSSatish Balay    Now d_nz should indicate the number of block nonzeros per row in the upper triangular
18866d10fdaeSSatish Balay    plus the diagonal part of the d matrix,
1887b5df2d14SHong Zhang    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1888b5df2d14SHong Zhang    In general, for PDE problems in which most nonzeros are near the diagonal,
1889b5df2d14SHong Zhang    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1890b5df2d14SHong Zhang    or you will get TERRIBLE performance; see the users' manual chapter on
1891b5df2d14SHong Zhang    matrices.
1892b5df2d14SHong Zhang 
1893b5df2d14SHong Zhang    Level: intermediate
1894b5df2d14SHong Zhang 
1895b5df2d14SHong Zhang .keywords: matrix, block, aij, compressed row, sparse, parallel
1896b5df2d14SHong Zhang 
1897b5df2d14SHong Zhang .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1898b5df2d14SHong Zhang @*/
1899ca01db9bSBarry Smith int MatMPISBAIJSetPreallocation(Mat B,int bs,int d_nz,const int d_nnz[],int o_nz,const int o_nnz[])
1900b5df2d14SHong Zhang {
1901ca01db9bSBarry Smith   int ierr,(*f)(Mat,int,int,const int[],int,const int[]);
1902b5df2d14SHong Zhang 
1903b5df2d14SHong Zhang   PetscFunctionBegin;
1904a23d5eceSKris Buschelman   ierr = PetscObjectQueryFunction((PetscObject)B,"MatMPISBAIJSetPreallocation_C",(void (**)(void))&f);CHKERRQ(ierr);
1905a23d5eceSKris Buschelman   if (f) {
1906a23d5eceSKris Buschelman     ierr = (*f)(B,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
1907b5df2d14SHong Zhang   }
1908b5df2d14SHong Zhang   PetscFunctionReturn(0);
1909b5df2d14SHong Zhang }
1910b5df2d14SHong Zhang 
19114a2ae208SSatish Balay #undef __FUNCT__
19124a2ae208SSatish Balay #define __FUNCT__ "MatCreateMPISBAIJ"
1913a30f8f8cSSatish Balay /*@C
1914a30f8f8cSSatish Balay    MatCreateMPISBAIJ - Creates a sparse parallel matrix in symmetric block AIJ format
1915a30f8f8cSSatish Balay    (block compressed row).  For good matrix assembly performance
1916a30f8f8cSSatish Balay    the user should preallocate the matrix storage by setting the parameters
1917a30f8f8cSSatish Balay    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1918a30f8f8cSSatish Balay    performance can be increased by more than a factor of 50.
1919a30f8f8cSSatish Balay 
1920a30f8f8cSSatish Balay    Collective on MPI_Comm
1921a30f8f8cSSatish Balay 
1922a30f8f8cSSatish Balay    Input Parameters:
1923a30f8f8cSSatish Balay +  comm - MPI communicator
1924a30f8f8cSSatish Balay .  bs   - size of blockk
1925a30f8f8cSSatish Balay .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
1926a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1927a30f8f8cSSatish Balay            y vector for the matrix-vector product y = Ax.
1928a30f8f8cSSatish Balay .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
1929a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1930a30f8f8cSSatish Balay            x vector for the matrix-vector product y = Ax.
1931a30f8f8cSSatish Balay .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
1932a30f8f8cSSatish Balay .  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
1933a30f8f8cSSatish Balay .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1934a30f8f8cSSatish Balay            submatrix  (same for all local rows)
1935a30f8f8cSSatish Balay .  d_nnz - array containing the number of block nonzeros in the various block rows
19366d10fdaeSSatish Balay            in the upper triangular portion of the in diagonal portion of the local
19376d10fdaeSSatish Balay            (possibly different for each block block row) or PETSC_NULL.
19386d10fdaeSSatish Balay            You must leave room for the diagonal entry even if it is zero.
1939a30f8f8cSSatish Balay .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1940a30f8f8cSSatish Balay            submatrix (same for all local rows).
1941a30f8f8cSSatish Balay -  o_nnz - array containing the number of nonzeros in the various block rows of the
1942a30f8f8cSSatish Balay            off-diagonal portion of the local submatrix (possibly different for
1943a30f8f8cSSatish Balay            each block row) or PETSC_NULL.
1944a30f8f8cSSatish Balay 
1945a30f8f8cSSatish Balay    Output Parameter:
1946a30f8f8cSSatish Balay .  A - the matrix
1947a30f8f8cSSatish Balay 
1948a30f8f8cSSatish Balay    Options Database Keys:
1949a30f8f8cSSatish Balay .   -mat_no_unroll - uses code that does not unroll the loops in the
1950a30f8f8cSSatish Balay                      block calculations (much slower)
1951a30f8f8cSSatish Balay .   -mat_block_size - size of the blocks to use
1952a30f8f8cSSatish Balay .   -mat_mpi - use the parallel matrix data structures even on one processor
1953a30f8f8cSSatish Balay                (defaults to using SeqBAIJ format on one processor)
1954a30f8f8cSSatish Balay 
1955a30f8f8cSSatish Balay    Notes:
1956a30f8f8cSSatish Balay    The user MUST specify either the local or global matrix dimensions
1957a30f8f8cSSatish Balay    (possibly both).
1958a30f8f8cSSatish Balay 
1959a30f8f8cSSatish Balay    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1960a30f8f8cSSatish Balay    than it must be used on all processors that share the object for that argument.
1961a30f8f8cSSatish Balay 
1962a30f8f8cSSatish Balay    Storage Information:
1963a30f8f8cSSatish Balay    For a square global matrix we define each processor's diagonal portion
1964a30f8f8cSSatish Balay    to be its local rows and the corresponding columns (a square submatrix);
1965a30f8f8cSSatish Balay    each processor's off-diagonal portion encompasses the remainder of the
1966a30f8f8cSSatish Balay    local matrix (a rectangular submatrix).
1967a30f8f8cSSatish Balay 
1968a30f8f8cSSatish Balay    The user can specify preallocated storage for the diagonal part of
1969a30f8f8cSSatish Balay    the local submatrix with either d_nz or d_nnz (not both).  Set
1970a30f8f8cSSatish Balay    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1971a30f8f8cSSatish Balay    memory allocation.  Likewise, specify preallocated storage for the
1972a30f8f8cSSatish Balay    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1973a30f8f8cSSatish Balay 
1974a30f8f8cSSatish Balay    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1975a30f8f8cSSatish Balay    the figure below we depict these three local rows and all columns (0-11).
1976a30f8f8cSSatish Balay 
1977a30f8f8cSSatish Balay .vb
1978a30f8f8cSSatish Balay            0 1 2 3 4 5 6 7 8 9 10 11
1979a30f8f8cSSatish Balay           -------------------
1980a30f8f8cSSatish Balay    row 3  |  o o o d d d o o o o o o
1981a30f8f8cSSatish Balay    row 4  |  o o o d d d o o o o o o
1982a30f8f8cSSatish Balay    row 5  |  o o o d d d o o o o o o
1983a30f8f8cSSatish Balay           -------------------
1984a30f8f8cSSatish Balay .ve
1985a30f8f8cSSatish Balay 
1986a30f8f8cSSatish Balay    Thus, any entries in the d locations are stored in the d (diagonal)
1987a30f8f8cSSatish Balay    submatrix, and any entries in the o locations are stored in the
19886d10fdaeSSatish Balay    o (off-diagonal) submatrix.  Note that the d matrix is stored in
19896d10fdaeSSatish Balay    MatSeqSBAIJ format and the o submatrix in MATSEQBAIJ format.
1990a30f8f8cSSatish Balay 
19916d10fdaeSSatish Balay    Now d_nz should indicate the number of block nonzeros per row in the upper triangular
19926d10fdaeSSatish Balay    plus the diagonal part of the d matrix,
1993a30f8f8cSSatish Balay    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1994a30f8f8cSSatish Balay    In general, for PDE problems in which most nonzeros are near the diagonal,
1995a30f8f8cSSatish Balay    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1996a30f8f8cSSatish Balay    or you will get TERRIBLE performance; see the users' manual chapter on
1997a30f8f8cSSatish Balay    matrices.
1998a30f8f8cSSatish Balay 
1999a30f8f8cSSatish Balay    Level: intermediate
2000a30f8f8cSSatish Balay 
2001a30f8f8cSSatish Balay .keywords: matrix, block, aij, compressed row, sparse, parallel
2002a30f8f8cSSatish Balay 
2003a209d233SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
2004a30f8f8cSSatish Balay @*/
2005a30f8f8cSSatish Balay 
2006ca01db9bSBarry Smith int MatCreateMPISBAIJ(MPI_Comm comm,int bs,int m,int n,int M,int N,int d_nz,const int d_nnz[],int o_nz,const int o_nnz[],Mat *A)
2007a30f8f8cSSatish Balay {
2008273d9f13SBarry Smith   int ierr,size;
2009a30f8f8cSSatish Balay 
2010a30f8f8cSSatish Balay   PetscFunctionBegin;
2011b5df2d14SHong Zhang   ierr = MatCreate(comm,m,n,M,N,A);CHKERRQ(ierr);
2012273d9f13SBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2013273d9f13SBarry Smith   if (size > 1) {
2014b5df2d14SHong Zhang     ierr = MatSetType(*A,MATMPISBAIJ);CHKERRQ(ierr);
2015b5df2d14SHong Zhang     ierr = MatMPISBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
2016273d9f13SBarry Smith   } else {
2017273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQSBAIJ);CHKERRQ(ierr);
2018273d9f13SBarry Smith     ierr = MatSeqSBAIJSetPreallocation(*A,bs,d_nz,d_nnz);CHKERRQ(ierr);
2019273d9f13SBarry Smith   }
2020a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2021a30f8f8cSSatish Balay }
2022a30f8f8cSSatish Balay 
2023a30f8f8cSSatish Balay 
20244a2ae208SSatish Balay #undef __FUNCT__
20254a2ae208SSatish Balay #define __FUNCT__ "MatDuplicate_MPISBAIJ"
2026a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
2027a30f8f8cSSatish Balay {
2028a30f8f8cSSatish Balay   Mat          mat;
2029a30f8f8cSSatish Balay   Mat_MPISBAIJ *a,*oldmat = (Mat_MPISBAIJ*)matin->data;
2030387bc808SHong Zhang   int          ierr,len=0,nt,bs=oldmat->bs,mbs=oldmat->mbs;
2031387bc808SHong Zhang   PetscScalar  *array;
2032a30f8f8cSSatish Balay 
2033a30f8f8cSSatish Balay   PetscFunctionBegin;
2034a30f8f8cSSatish Balay   *newmat       = 0;
2035b5df2d14SHong Zhang   ierr = MatCreate(matin->comm,matin->m,matin->n,matin->M,matin->N,&mat);CHKERRQ(ierr);
2036be5d1d56SKris Buschelman   ierr = MatSetType(mat,matin->type_name);CHKERRQ(ierr);
20377fff6886SHong Zhang 
20387fff6886SHong Zhang   /* ierr = PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr); */ /*-- cause error? */
203982327fa8SHong Zhang   mat->factor       = matin->factor;
2040273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
204182327fa8SHong Zhang   mat->assembled    = PETSC_TRUE;
20427fff6886SHong Zhang   mat->insertmode   = NOT_SET_VALUES;
20437fff6886SHong Zhang 
2044b5df2d14SHong Zhang   a = (Mat_MPISBAIJ*)mat->data;
2045a30f8f8cSSatish Balay   a->bs  = oldmat->bs;
2046a30f8f8cSSatish Balay   a->bs2 = oldmat->bs2;
2047a30f8f8cSSatish Balay   a->mbs = oldmat->mbs;
2048a30f8f8cSSatish Balay   a->nbs = oldmat->nbs;
2049a30f8f8cSSatish Balay   a->Mbs = oldmat->Mbs;
2050a30f8f8cSSatish Balay   a->Nbs = oldmat->Nbs;
2051a30f8f8cSSatish Balay 
2052a30f8f8cSSatish Balay   a->rstart       = oldmat->rstart;
2053a30f8f8cSSatish Balay   a->rend         = oldmat->rend;
2054a30f8f8cSSatish Balay   a->cstart       = oldmat->cstart;
2055a30f8f8cSSatish Balay   a->cend         = oldmat->cend;
2056a30f8f8cSSatish Balay   a->size         = oldmat->size;
2057a30f8f8cSSatish Balay   a->rank         = oldmat->rank;
2058a30f8f8cSSatish Balay   a->donotstash   = oldmat->donotstash;
2059a30f8f8cSSatish Balay   a->roworiented  = oldmat->roworiented;
2060a30f8f8cSSatish Balay   a->rowindices   = 0;
2061a30f8f8cSSatish Balay   a->rowvalues    = 0;
2062a30f8f8cSSatish Balay   a->getrowactive = PETSC_FALSE;
2063a30f8f8cSSatish Balay   a->barray       = 0;
2064a30f8f8cSSatish Balay   a->rstart_bs    = oldmat->rstart_bs;
2065a30f8f8cSSatish Balay   a->rend_bs      = oldmat->rend_bs;
2066a30f8f8cSSatish Balay   a->cstart_bs    = oldmat->cstart_bs;
2067a30f8f8cSSatish Balay   a->cend_bs      = oldmat->cend_bs;
2068a30f8f8cSSatish Balay 
2069a30f8f8cSSatish Balay   /* hash table stuff */
2070a30f8f8cSSatish Balay   a->ht           = 0;
2071a30f8f8cSSatish Balay   a->hd           = 0;
2072a30f8f8cSSatish Balay   a->ht_size      = 0;
2073a30f8f8cSSatish Balay   a->ht_flag      = oldmat->ht_flag;
2074a30f8f8cSSatish Balay   a->ht_fact      = oldmat->ht_fact;
2075a30f8f8cSSatish Balay   a->ht_total_ct  = 0;
2076a30f8f8cSSatish Balay   a->ht_insert_ct = 0;
2077a30f8f8cSSatish Balay 
2078a30f8f8cSSatish Balay   ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(int));CHKERRQ(ierr);
2079a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
2080a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,oldmat->bs,&mat->bstash);CHKERRQ(ierr);
2081a30f8f8cSSatish Balay   if (oldmat->colmap) {
2082a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
2083a30f8f8cSSatish Balay     ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
2084a30f8f8cSSatish Balay #else
208582502324SSatish Balay     ierr = PetscMalloc((a->Nbs)*sizeof(int),&a->colmap);CHKERRQ(ierr);
2086b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,(a->Nbs)*sizeof(int));
2087a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(int));CHKERRQ(ierr);
2088a30f8f8cSSatish Balay #endif
2089a30f8f8cSSatish Balay   } else a->colmap = 0;
2090387bc808SHong Zhang 
2091a30f8f8cSSatish Balay   if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
209282502324SSatish Balay     ierr = PetscMalloc(len*sizeof(int),&a->garray);CHKERRQ(ierr);
2093b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,len*sizeof(int));
2094a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));CHKERRQ(ierr);
2095a30f8f8cSSatish Balay   } else a->garray = 0;
2096a30f8f8cSSatish Balay 
2097a30f8f8cSSatish Balay   ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
2098b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->lvec);
2099a30f8f8cSSatish Balay   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
2100b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->Mvctx);
210182327fa8SHong Zhang 
210282327fa8SHong Zhang   ierr =  VecDuplicate(oldmat->slvec0,&a->slvec0);CHKERRQ(ierr);
2103387bc808SHong Zhang   PetscLogObjectParent(mat,a->slvec0);
210482327fa8SHong Zhang   ierr =  VecDuplicate(oldmat->slvec1,&a->slvec1);CHKERRQ(ierr);
2105387bc808SHong Zhang   PetscLogObjectParent(mat,a->slvec1);
2106387bc808SHong Zhang 
2107387bc808SHong Zhang   ierr = VecGetLocalSize(a->slvec1,&nt);CHKERRQ(ierr);
2108387bc808SHong Zhang   ierr = VecGetArrayFast(a->slvec1,&array);CHKERRQ(ierr);
2109387bc808SHong Zhang   ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,bs*mbs,array,&a->slvec1a);CHKERRQ(ierr);
2110387bc808SHong Zhang   ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,nt-bs*mbs,array+bs*mbs,&a->slvec1b);CHKERRQ(ierr);
2111387bc808SHong Zhang   ierr = VecRestoreArrayFast(a->slvec1,&array);CHKERRQ(ierr);
2112387bc808SHong Zhang   ierr = VecGetArrayFast(a->slvec0,&array);CHKERRQ(ierr);
2113387bc808SHong Zhang   ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,nt-bs*mbs,array+bs*mbs,&a->slvec0b);CHKERRQ(ierr);
2114387bc808SHong Zhang   ierr = VecRestoreArrayFast(a->slvec0,&array);CHKERRQ(ierr);
2115387bc808SHong Zhang   PetscLogObjectParent(mat,a->slvec0);
2116387bc808SHong Zhang   PetscLogObjectParent(mat,a->slvec1);
2117387bc808SHong Zhang   PetscLogObjectParent(mat,a->slvec0b);
2118387bc808SHong Zhang   PetscLogObjectParent(mat,a->slvec1a);
2119387bc808SHong Zhang   PetscLogObjectParent(mat,a->slvec1b);
2120387bc808SHong Zhang 
2121387bc808SHong Zhang   /* ierr =  VecScatterCopy(oldmat->sMvctx,&a->sMvctx); - not written yet, replaced by the lazy trick: */
2122387bc808SHong Zhang   ierr = PetscObjectReference((PetscObject)oldmat->sMvctx);CHKERRQ(ierr);
2123387bc808SHong Zhang   a->sMvctx = oldmat->sMvctx;
2124387bc808SHong Zhang   PetscLogObjectParent(mat,a->sMvctx);
212582327fa8SHong Zhang 
2126a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
2127b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->A);
2128a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
2129b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->B);
2130b0a32e0cSBarry Smith   ierr = PetscFListDuplicate(mat->qlist,&matin->qlist);CHKERRQ(ierr);
2131a30f8f8cSSatish Balay   *newmat = mat;
2132a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2133a30f8f8cSSatish Balay }
2134a30f8f8cSSatish Balay 
2135a30f8f8cSSatish Balay #include "petscsys.h"
2136a30f8f8cSSatish Balay 
21374a2ae208SSatish Balay #undef __FUNCT__
21384a2ae208SSatish Balay #define __FUNCT__ "MatLoad_MPISBAIJ"
21398e9aea5cSBarry Smith int MatLoad_MPISBAIJ(PetscViewer viewer,const MatType type,Mat *newmat)
2140a30f8f8cSSatish Balay {
2141a30f8f8cSSatish Balay   Mat          A;
2142a30f8f8cSSatish Balay   int          i,nz,ierr,j,rstart,rend,fd;
214387828ca2SBarry Smith   PetscScalar  *vals,*buf;
2144a30f8f8cSSatish Balay   MPI_Comm     comm = ((PetscObject)viewer)->comm;
2145a30f8f8cSSatish Balay   MPI_Status   status;
2146a30f8f8cSSatish Balay   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,*browners,maxnz,*cols;
2147a30f8f8cSSatish Balay   int          *locrowlens,*sndcounts = 0,*procsnz = 0,jj,*mycols,*ibuf;
2148a30f8f8cSSatish Balay   int          tag = ((PetscObject)viewer)->tag,bs=1,Mbs,mbs,extra_rows;
2149a30f8f8cSSatish Balay   int          *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
2150a30f8f8cSSatish Balay   int          dcount,kmax,k,nzcount,tmp;
2151a30f8f8cSSatish Balay 
2152a30f8f8cSSatish Balay   PetscFunctionBegin;
2153b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
2154a30f8f8cSSatish Balay 
2155a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2156a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
2157a30f8f8cSSatish Balay   if (!rank) {
2158b0a32e0cSBarry Smith     ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
2159a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
2160552e946dSBarry Smith     if (header[0] != MAT_FILE_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
2161a30f8f8cSSatish Balay     if (header[3] < 0) {
216229bbc08cSBarry Smith       SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format, cannot load as MPISBAIJ");
2163a30f8f8cSSatish Balay     }
2164a30f8f8cSSatish Balay   }
2165a30f8f8cSSatish Balay 
2166a30f8f8cSSatish Balay   ierr = MPI_Bcast(header+1,3,MPI_INT,0,comm);CHKERRQ(ierr);
2167a30f8f8cSSatish Balay   M = header[1]; N = header[2];
2168a30f8f8cSSatish Balay 
216929bbc08cSBarry Smith   if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");
2170a30f8f8cSSatish Balay 
2171a30f8f8cSSatish Balay   /*
2172a30f8f8cSSatish Balay      This code adds extra rows to make sure the number of rows is
2173a30f8f8cSSatish Balay      divisible by the blocksize
2174a30f8f8cSSatish Balay   */
2175a30f8f8cSSatish Balay   Mbs        = M/bs;
2176a30f8f8cSSatish Balay   extra_rows = bs - M + bs*(Mbs);
2177a30f8f8cSSatish Balay   if (extra_rows == bs) extra_rows = 0;
2178a30f8f8cSSatish Balay   else                  Mbs++;
2179a30f8f8cSSatish Balay   if (extra_rows &&!rank) {
2180b0a32e0cSBarry Smith     PetscLogInfo(0,"MatLoad_MPISBAIJ:Padding loaded matrix to match blocksize\n");
2181a30f8f8cSSatish Balay   }
2182a30f8f8cSSatish Balay 
2183a30f8f8cSSatish Balay   /* determine ownership of all rows */
2184a30f8f8cSSatish Balay   mbs        = Mbs/size + ((Mbs % size) > rank);
2185a30f8f8cSSatish Balay   m          = mbs*bs;
2186b0a32e0cSBarry Smith   ierr       = PetscMalloc(2*(size+2)*sizeof(int),&rowners);CHKERRQ(ierr);
2187a30f8f8cSSatish Balay   browners   = rowners + size + 1;
2188a30f8f8cSSatish Balay   ierr       = MPI_Allgather(&mbs,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
2189a30f8f8cSSatish Balay   rowners[0] = 0;
2190a30f8f8cSSatish Balay   for (i=2; i<=size; i++) rowners[i] += rowners[i-1];
2191a30f8f8cSSatish Balay   for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
2192a30f8f8cSSatish Balay   rstart = rowners[rank];
2193a30f8f8cSSatish Balay   rend   = rowners[rank+1];
2194a30f8f8cSSatish Balay 
2195a30f8f8cSSatish Balay   /* distribute row lengths to all processors */
219682502324SSatish Balay   ierr = PetscMalloc((rend-rstart)*bs*sizeof(int),&locrowlens);CHKERRQ(ierr);
2197a30f8f8cSSatish Balay   if (!rank) {
2198b0a32e0cSBarry Smith     ierr = PetscMalloc((M+extra_rows)*sizeof(int),&rowlengths);CHKERRQ(ierr);
2199a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
2200a30f8f8cSSatish Balay     for (i=0; i<extra_rows; i++) rowlengths[M+i] = 1;
220182502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&sndcounts);CHKERRQ(ierr);
2202a30f8f8cSSatish Balay     for (i=0; i<size; i++) sndcounts[i] = browners[i+1] - browners[i];
2203a30f8f8cSSatish Balay     ierr = MPI_Scatterv(rowlengths,sndcounts,browners,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2204a30f8f8cSSatish Balay     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
2205a30f8f8cSSatish Balay   } else {
2206a30f8f8cSSatish Balay     ierr = MPI_Scatterv(0,0,0,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2207a30f8f8cSSatish Balay   }
2208a30f8f8cSSatish Balay 
22090222edb1SHong Zhang   if (!rank) {   /* procs[0] */
2210a30f8f8cSSatish Balay     /* calculate the number of nonzeros on each processor */
221182502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&procsnz);CHKERRQ(ierr);
2212a30f8f8cSSatish Balay     ierr = PetscMemzero(procsnz,size*sizeof(int));CHKERRQ(ierr);
2213a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2214a30f8f8cSSatish Balay       for (j=rowners[i]*bs; j< rowners[i+1]*bs; j++) {
2215a30f8f8cSSatish Balay         procsnz[i] += rowlengths[j];
2216a30f8f8cSSatish Balay       }
2217a30f8f8cSSatish Balay     }
2218a30f8f8cSSatish Balay     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
2219a30f8f8cSSatish Balay 
2220a30f8f8cSSatish Balay     /* determine max buffer needed and allocate it */
2221a30f8f8cSSatish Balay     maxnz = 0;
2222a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2223a30f8f8cSSatish Balay       maxnz = PetscMax(maxnz,procsnz[i]);
2224a30f8f8cSSatish Balay     }
222582502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(int),&cols);CHKERRQ(ierr);
2226a30f8f8cSSatish Balay 
2227a30f8f8cSSatish Balay     /* read in my part of the matrix column indices  */
2228a30f8f8cSSatish Balay     nz     = procsnz[0];
222982502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2230a30f8f8cSSatish Balay     mycols = ibuf;
2231a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2232a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
2233a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }
2234a30f8f8cSSatish Balay 
2235a30f8f8cSSatish Balay     /* read in every ones (except the last) and ship off */
2236a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2237a30f8f8cSSatish Balay       nz   = procsnz[i];
2238a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2239a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz,MPI_INT,i,tag,comm);CHKERRQ(ierr);
2240a30f8f8cSSatish Balay     }
2241a30f8f8cSSatish Balay     /* read in the stuff for the last proc */
2242a30f8f8cSSatish Balay     if (size != 1) {
2243a30f8f8cSSatish Balay       nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
2244a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2245a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
2246a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz+extra_rows,MPI_INT,size-1,tag,comm);CHKERRQ(ierr);
2247a30f8f8cSSatish Balay     }
2248a30f8f8cSSatish Balay     ierr = PetscFree(cols);CHKERRQ(ierr);
22490222edb1SHong Zhang   } else {  /* procs[i], i>0 */
2250a30f8f8cSSatish Balay     /* determine buffer space needed for message */
2251a30f8f8cSSatish Balay     nz = 0;
2252a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2253a30f8f8cSSatish Balay       nz += locrowlens[i];
2254a30f8f8cSSatish Balay     }
225582502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2256a30f8f8cSSatish Balay     mycols = ibuf;
2257a30f8f8cSSatish Balay     /* receive message of column indices*/
2258a30f8f8cSSatish Balay     ierr = MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);CHKERRQ(ierr);
2259a30f8f8cSSatish Balay     ierr = MPI_Get_count(&status,MPI_INT,&maxnz);CHKERRQ(ierr);
226029bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2261a30f8f8cSSatish Balay   }
2262a30f8f8cSSatish Balay 
2263a30f8f8cSSatish Balay   /* loop over local rows, determining number of off diagonal entries */
226482502324SSatish Balay   ierr     = PetscMalloc(2*(rend-rstart+1)*sizeof(int),&dlens);CHKERRQ(ierr);
2265a30f8f8cSSatish Balay   odlens   = dlens + (rend-rstart);
226682502324SSatish Balay   ierr     = PetscMalloc(3*Mbs*sizeof(int),&mask);CHKERRQ(ierr);
2267a30f8f8cSSatish Balay   ierr     = PetscMemzero(mask,3*Mbs*sizeof(int));CHKERRQ(ierr);
2268a30f8f8cSSatish Balay   masked1  = mask    + Mbs;
2269a30f8f8cSSatish Balay   masked2  = masked1 + Mbs;
2270a30f8f8cSSatish Balay   rowcount = 0; nzcount = 0;
2271a30f8f8cSSatish Balay   for (i=0; i<mbs; i++) {
2272a30f8f8cSSatish Balay     dcount  = 0;
2273a30f8f8cSSatish Balay     odcount = 0;
2274a30f8f8cSSatish Balay     for (j=0; j<bs; j++) {
2275a30f8f8cSSatish Balay       kmax = locrowlens[rowcount];
2276a30f8f8cSSatish Balay       for (k=0; k<kmax; k++) {
22770222edb1SHong Zhang         tmp = mycols[nzcount++]/bs; /* block col. index */
2278a30f8f8cSSatish Balay         if (!mask[tmp]) {
2279a30f8f8cSSatish Balay           mask[tmp] = 1;
22800222edb1SHong Zhang           if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp; /* entry in off-diag portion */
22810222edb1SHong Zhang           else masked1[dcount++] = tmp; /* entry in diag portion */
2282a30f8f8cSSatish Balay         }
2283a30f8f8cSSatish Balay       }
2284a30f8f8cSSatish Balay       rowcount++;
2285a30f8f8cSSatish Balay     }
2286a30f8f8cSSatish Balay 
22870222edb1SHong Zhang     dlens[i]  = dcount;  /* d_nzz[i] */
22880222edb1SHong Zhang     odlens[i] = odcount; /* o_nzz[i] */
2289a30f8f8cSSatish Balay 
2290a30f8f8cSSatish Balay     /* zero out the mask elements we set */
2291a30f8f8cSSatish Balay     for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
2292a30f8f8cSSatish Balay     for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
2293a30f8f8cSSatish Balay   }
2294a30f8f8cSSatish Balay 
2295a30f8f8cSSatish Balay   /* create our matrix */
229622191285SKris Buschelman   ierr = MatCreate(comm,m,m,PETSC_DETERMINE,PETSC_DETERMINE,&A);CHKERRQ(ierr);
229722191285SKris Buschelman   ierr = MatSetType(A,type);CHKERRQ(ierr);
229822191285SKris Buschelman   ierr = MatMPISBAIJSetPreallocation(A,bs,0,dlens,0,odlens);CHKERRQ(ierr);
2299273d9f13SBarry Smith   ierr = MatSetOption(A,MAT_COLUMNS_SORTED);CHKERRQ(ierr);
2300a30f8f8cSSatish Balay 
2301a30f8f8cSSatish Balay   if (!rank) {
230287828ca2SBarry Smith     ierr = PetscMalloc(maxnz*sizeof(PetscScalar),&buf);CHKERRQ(ierr);
2303a30f8f8cSSatish Balay     /* read in my part of the matrix numerical values  */
2304a30f8f8cSSatish Balay     nz = procsnz[0];
2305a30f8f8cSSatish Balay     vals = buf;
2306a30f8f8cSSatish Balay     mycols = ibuf;
2307a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2308a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2309a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }
2310a30f8f8cSSatish Balay 
2311a30f8f8cSSatish Balay     /* insert into matrix */
2312a30f8f8cSSatish Balay     jj      = rstart*bs;
2313a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
23147e06b45fSHong Zhang       ierr = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2315a30f8f8cSSatish Balay       mycols += locrowlens[i];
2316a30f8f8cSSatish Balay       vals   += locrowlens[i];
2317a30f8f8cSSatish Balay       jj++;
2318a30f8f8cSSatish Balay     }
23197e06b45fSHong Zhang 
2320a30f8f8cSSatish Balay     /* read in other processors (except the last one) and ship out */
2321a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2322a30f8f8cSSatish Balay       nz   = procsnz[i];
2323a30f8f8cSSatish Balay       vals = buf;
2324a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2325a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
2326a30f8f8cSSatish Balay     }
2327a30f8f8cSSatish Balay     /* the last proc */
2328a30f8f8cSSatish Balay     if (size != 1){
2329a30f8f8cSSatish Balay       nz   = procsnz[i] - extra_rows;
2330a30f8f8cSSatish Balay       vals = buf;
2331a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2332a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
2333a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
2334a30f8f8cSSatish Balay     }
2335a30f8f8cSSatish Balay     ierr = PetscFree(procsnz);CHKERRQ(ierr);
23367e06b45fSHong Zhang 
2337a30f8f8cSSatish Balay   } else {
2338a30f8f8cSSatish Balay     /* receive numeric values */
233987828ca2SBarry Smith     ierr = PetscMalloc(nz*sizeof(PetscScalar),&buf);CHKERRQ(ierr);
2340a30f8f8cSSatish Balay 
2341a30f8f8cSSatish Balay     /* receive message of values*/
2342a30f8f8cSSatish Balay     vals   = buf;
2343a30f8f8cSSatish Balay     mycols = ibuf;
2344a30f8f8cSSatish Balay     ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
2345a30f8f8cSSatish Balay     ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
234629bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2347a30f8f8cSSatish Balay 
2348a30f8f8cSSatish Balay     /* insert into matrix */
2349a30f8f8cSSatish Balay     jj      = rstart*bs;
2350a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2351a30f8f8cSSatish Balay       ierr    = MatSetValues_MPISBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2352a30f8f8cSSatish Balay       mycols += locrowlens[i];
2353a30f8f8cSSatish Balay       vals   += locrowlens[i];
2354a30f8f8cSSatish Balay       jj++;
2355a30f8f8cSSatish Balay     }
2356a30f8f8cSSatish Balay   }
23577e06b45fSHong Zhang 
2358a30f8f8cSSatish Balay   ierr = PetscFree(locrowlens);CHKERRQ(ierr);
2359a30f8f8cSSatish Balay   ierr = PetscFree(buf);CHKERRQ(ierr);
2360a30f8f8cSSatish Balay   ierr = PetscFree(ibuf);CHKERRQ(ierr);
2361a30f8f8cSSatish Balay   ierr = PetscFree(rowners);CHKERRQ(ierr);
2362a30f8f8cSSatish Balay   ierr = PetscFree(dlens);CHKERRQ(ierr);
2363a30f8f8cSSatish Balay   ierr = PetscFree(mask);CHKERRQ(ierr);
2364a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2365a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
236622191285SKris Buschelman   *newmat = A;
2367a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2368a30f8f8cSSatish Balay }
2369a30f8f8cSSatish Balay 
23704a2ae208SSatish Balay #undef __FUNCT__
23714a2ae208SSatish Balay #define __FUNCT__ "MatMPISBAIJSetHashTableFactor"
2372a30f8f8cSSatish Balay /*@
2373a30f8f8cSSatish Balay    MatMPISBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.
2374a30f8f8cSSatish Balay 
2375a30f8f8cSSatish Balay    Input Parameters:
2376a30f8f8cSSatish Balay .  mat  - the matrix
2377a30f8f8cSSatish Balay .  fact - factor
2378a30f8f8cSSatish Balay 
2379a30f8f8cSSatish Balay    Collective on Mat
2380a30f8f8cSSatish Balay 
2381a30f8f8cSSatish Balay    Level: advanced
2382a30f8f8cSSatish Balay 
2383a30f8f8cSSatish Balay   Notes:
2384a30f8f8cSSatish Balay    This can also be set by the command line option: -mat_use_hash_table fact
2385a30f8f8cSSatish Balay 
2386a30f8f8cSSatish Balay .keywords: matrix, hashtable, factor, HT
2387a30f8f8cSSatish Balay 
2388a30f8f8cSSatish Balay .seealso: MatSetOption()
2389a30f8f8cSSatish Balay @*/
2390a30f8f8cSSatish Balay int MatMPISBAIJSetHashTableFactor(Mat mat,PetscReal fact)
2391a30f8f8cSSatish Balay {
2392a30f8f8cSSatish Balay   PetscFunctionBegin;
239329bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
239496e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
2395a30f8f8cSSatish Balay }
239624d5174aSHong Zhang 
23974a2ae208SSatish Balay #undef __FUNCT__
23984a2ae208SSatish Balay #define __FUNCT__ "MatGetRowMax_MPISBAIJ"
239924d5174aSHong Zhang int MatGetRowMax_MPISBAIJ(Mat A,Vec v)
240024d5174aSHong Zhang {
240124d5174aSHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
2402f4c0e9e4SHong Zhang   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(a->B)->data;
2403ca54ac64SHong Zhang   PetscReal    atmp;
240487828ca2SBarry Smith   PetscReal    *work,*svalues,*rvalues;
2405ca54ac64SHong Zhang   int          ierr,i,bs,mbs,*bi,*bj,brow,j,ncols,krow,kcol,col,row,Mbs,bcol;
2406154bba0bSHong Zhang   int          rank,size,*rowners_bs,dest,count,source;
240787828ca2SBarry Smith   PetscScalar  *va;
24088a1c53f2SBarry Smith   MatScalar    *ba;
2409f4c0e9e4SHong Zhang   MPI_Status   stat;
241024d5174aSHong Zhang 
241124d5174aSHong Zhang   PetscFunctionBegin;
2412d36791b2SHong Zhang   ierr = MatGetRowMax(a->A,v);CHKERRQ(ierr);
2413b1d4fb26SBarry Smith   ierr = VecGetArrayFast(v,&va);CHKERRQ(ierr);
2414f4c0e9e4SHong Zhang 
241556faa61eSBarry Smith   ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr);
241656faa61eSBarry Smith   ierr = MPI_Comm_rank(A->comm,&rank);CHKERRQ(ierr);
2417f4c0e9e4SHong Zhang 
2418f4c0e9e4SHong Zhang   bs   = a->bs;
2419f4c0e9e4SHong Zhang   mbs  = a->mbs;
2420f4c0e9e4SHong Zhang   Mbs  = a->Mbs;
2421f4c0e9e4SHong Zhang   ba   = b->a;
2422f4c0e9e4SHong Zhang   bi   = b->i;
2423f4c0e9e4SHong Zhang   bj   = b->j;
2424ca54ac64SHong Zhang   /*
242556faa61eSBarry Smith   PetscSynchronizedPrintf(A->comm,"[%d] M: %d, bs: %d, mbs: %d \n",rank,bs*Mbs,bs,mbs);
242656faa61eSBarry Smith   PetscSynchronizedFlush(A->comm);
2427ca54ac64SHong Zhang   */
2428f4c0e9e4SHong Zhang 
2429f4c0e9e4SHong Zhang   /* find ownerships */
2430f4c0e9e4SHong Zhang   rowners_bs = a->rowners_bs;
2431f4c0e9e4SHong Zhang   /*
243204d41228SHong Zhang   if (!rank){
243304d41228SHong Zhang     for (i=0; i<size+1; i++) PetscPrintf(PETSC_COMM_SELF," rowners_bs[%d]: %d\n",i,rowners_bs[i]);
2434f4c0e9e4SHong Zhang   }
2435f4c0e9e4SHong Zhang   */
2436f4c0e9e4SHong Zhang 
2437f4c0e9e4SHong Zhang   /* each proc creates an array to be distributed */
243882502324SSatish Balay   ierr = PetscMalloc(bs*Mbs*sizeof(PetscReal),&work);CHKERRQ(ierr);
2439ca54ac64SHong Zhang   ierr = PetscMemzero(work,bs*Mbs*sizeof(PetscReal));CHKERRQ(ierr);
2440f4c0e9e4SHong Zhang 
2441f4c0e9e4SHong Zhang   /* row_max for B */
2442b8475685SHong Zhang   if (rank != size-1){
2443f4c0e9e4SHong Zhang     for (i=0; i<mbs; i++) {
2444f4c0e9e4SHong Zhang       ncols = bi[1] - bi[0]; bi++;
2445f4c0e9e4SHong Zhang       brow  = bs*i;
2446f4c0e9e4SHong Zhang       for (j=0; j<ncols; j++){
2447f4c0e9e4SHong Zhang         bcol = bs*(*bj);
2448f4c0e9e4SHong Zhang         for (kcol=0; kcol<bs; kcol++){
2449ca54ac64SHong Zhang           col = bcol + kcol;                 /* local col index */
245004d41228SHong Zhang           col += rowners_bs[rank+1];      /* global col index */
2451ca54ac64SHong Zhang           /* PetscPrintf(PETSC_COMM_SELF,"[%d], col: %d\n",rank,col); */
2452f4c0e9e4SHong Zhang           for (krow=0; krow<bs; krow++){
2453f4c0e9e4SHong Zhang             atmp = PetscAbsScalar(*ba); ba++;
2454ca54ac64SHong Zhang             row = brow + krow;    /* local row index */
2455f4c0e9e4SHong Zhang             /* printf("val[%d,%d]: %g\n",row,col,atmp); */
2456ca54ac64SHong Zhang             if (PetscRealPart(va[row]) < atmp) va[row] = atmp;
2457f4c0e9e4SHong Zhang             if (work[col] < atmp) work[col] = atmp;
2458f4c0e9e4SHong Zhang           }
2459f4c0e9e4SHong Zhang         }
2460f4c0e9e4SHong Zhang         bj++;
2461f4c0e9e4SHong Zhang       }
2462f4c0e9e4SHong Zhang     }
246304d41228SHong Zhang     /*
246404d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d], work: ",rank);
246504d41228SHong Zhang       for (i=0; i<bs*Mbs; i++) PetscPrintf(PETSC_COMM_SELF,"%g ",work[i]);
246604d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d]: \n");
246704d41228SHong Zhang       */
2468f4c0e9e4SHong Zhang 
2469f4c0e9e4SHong Zhang     /* send values to its owners */
2470f4c0e9e4SHong Zhang     for (dest=rank+1; dest<size; dest++){
2471f4c0e9e4SHong Zhang       svalues = work + rowners_bs[dest];
2472ca54ac64SHong Zhang       count   = rowners_bs[dest+1]-rowners_bs[dest];
247356faa61eSBarry Smith       ierr    = MPI_Send(svalues,count,MPIU_REAL,dest,rank,A->comm);CHKERRQ(ierr);
2474ca54ac64SHong Zhang       /*
247556faa61eSBarry Smith       PetscSynchronizedPrintf(A->comm,"[%d] sends %d values to [%d]: %g, %g, %g, %g\n",rank,count,dest,svalues[0],svalues[1],svalues[2],svalues[3]);
247656faa61eSBarry Smith       PetscSynchronizedFlush(A->comm);
2477ca54ac64SHong Zhang       */
2478ca54ac64SHong Zhang     }
2479f4c0e9e4SHong Zhang   }
2480f4c0e9e4SHong Zhang 
2481f4c0e9e4SHong Zhang   /* receive values */
2482ca54ac64SHong Zhang   if (rank){
2483f4c0e9e4SHong Zhang     rvalues = work;
2484ca54ac64SHong Zhang     count   = rowners_bs[rank+1]-rowners_bs[rank];
2485f4c0e9e4SHong Zhang     for (source=0; source<rank; source++){
248656faa61eSBarry Smith       ierr = MPI_Recv(rvalues,count,MPIU_REAL,MPI_ANY_SOURCE,MPI_ANY_TAG,A->comm,&stat);CHKERRQ(ierr);
2487f4c0e9e4SHong Zhang       /* process values */
2488f4c0e9e4SHong Zhang       for (i=0; i<count; i++){
2489ca54ac64SHong Zhang         if (PetscRealPart(va[i]) < rvalues[i]) va[i] = rvalues[i];
2490f4c0e9e4SHong Zhang       }
2491ca54ac64SHong Zhang       /*
249256faa61eSBarry Smith       PetscSynchronizedPrintf(A->comm,"[%d] received %d values from [%d]: %g, %g, %g, %g \n",rank,count,stat.MPI_SOURCE,rvalues[0],rvalues[1],rvalues[2],rvalues[3]);
249356faa61eSBarry Smith       PetscSynchronizedFlush(A->comm);
2494ca54ac64SHong Zhang       */
2495f4c0e9e4SHong Zhang     }
2496ca54ac64SHong Zhang   }
2497f4c0e9e4SHong Zhang 
2498b1d4fb26SBarry Smith   ierr = VecRestoreArrayFast(v,&va);CHKERRQ(ierr);
2499ac355199SBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
250024d5174aSHong Zhang   PetscFunctionReturn(0);
250124d5174aSHong Zhang }
25022798e883SHong Zhang 
25032798e883SHong Zhang #undef __FUNCT__
25042798e883SHong Zhang #define __FUNCT__ "MatRelax_MPISBAIJ"
2505c14dc6b6SHong Zhang int MatRelax_MPISBAIJ(Mat matin,Vec bb,PetscReal omega,MatSORType flag,PetscReal fshift,int its,int lits,Vec xx)
25062798e883SHong Zhang {
25072798e883SHong Zhang   Mat_MPISBAIJ   *mat = (Mat_MPISBAIJ*)matin->data;
2508ffe4fb16SHong Zhang   int            ierr,mbs=mat->mbs,bs=mat->bs;
2509ffe4fb16SHong Zhang   PetscScalar    mone=-1.0,*x,*b,*ptr,zero=0.0;
2510ffe4fb16SHong Zhang   Vec            bb1;
2511ffe4fb16SHong Zhang 
2512ffe4fb16SHong Zhang   PetscFunctionBegin;
2513ffe4fb16SHong Zhang   if (its <= 0 || lits <= 0) SETERRQ2(PETSC_ERR_ARG_WRONG,"Relaxation requires global its %d and local its %d both positive",its,lits);
2514ffe4fb16SHong Zhang   if (bs > 1)
2515ffe4fb16SHong Zhang     SETERRQ(PETSC_ERR_SUP,"SSOR for block size > 1 is not yet implemented");
2516ffe4fb16SHong Zhang 
2517ffe4fb16SHong Zhang   if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){
2518ffe4fb16SHong Zhang     if ( flag & SOR_ZERO_INITIAL_GUESS ) {
2519ffe4fb16SHong Zhang       ierr = (*mat->A->ops->relax)(mat->A,bb,omega,flag,fshift,lits,lits,xx);CHKERRQ(ierr);
2520ffe4fb16SHong Zhang       its--;
2521ffe4fb16SHong Zhang     }
2522ffe4fb16SHong Zhang 
2523ffe4fb16SHong Zhang     ierr = VecDuplicate(bb,&bb1);CHKERRQ(ierr);
2524ffe4fb16SHong Zhang     while (its--){
2525ffe4fb16SHong Zhang 
2526ffe4fb16SHong Zhang       /* lower triangular part: slvec0b = - B^T*xx */
2527ffe4fb16SHong Zhang       ierr = (*mat->B->ops->multtranspose)(mat->B,xx,mat->slvec0b);CHKERRQ(ierr);
2528ffe4fb16SHong Zhang 
2529ffe4fb16SHong Zhang       /* copy xx into slvec0a */
2530b1d4fb26SBarry Smith       ierr = VecGetArrayFast(mat->slvec0,&ptr);CHKERRQ(ierr);
2531b1d4fb26SBarry Smith       ierr = VecGetArrayFast(xx,&x);CHKERRQ(ierr);
2532ffe4fb16SHong Zhang       ierr = PetscMemcpy(ptr,x,bs*mbs*sizeof(MatScalar));CHKERRQ(ierr);
2533b1d4fb26SBarry Smith       ierr = VecRestoreArrayFast(mat->slvec0,&ptr);CHKERRQ(ierr);
2534ffe4fb16SHong Zhang 
2535ffe4fb16SHong Zhang       ierr = VecScale(&mone,mat->slvec0);CHKERRQ(ierr);
2536ffe4fb16SHong Zhang 
2537ffe4fb16SHong Zhang       /* copy bb into slvec1a */
2538b1d4fb26SBarry Smith       ierr = VecGetArrayFast(mat->slvec1,&ptr);CHKERRQ(ierr);
2539b1d4fb26SBarry Smith       ierr = VecGetArrayFast(bb,&b);CHKERRQ(ierr);
2540ffe4fb16SHong Zhang       ierr = PetscMemcpy(ptr,b,bs*mbs*sizeof(MatScalar));CHKERRQ(ierr);
2541b1d4fb26SBarry Smith       ierr = VecRestoreArrayFast(mat->slvec1,&ptr);CHKERRQ(ierr);
2542ffe4fb16SHong Zhang 
2543ffe4fb16SHong Zhang       /* set slvec1b = 0 */
2544ffe4fb16SHong Zhang       ierr = VecSet(&zero,mat->slvec1b);CHKERRQ(ierr);
2545ffe4fb16SHong Zhang 
2546ffe4fb16SHong Zhang       ierr = VecScatterBegin(mat->slvec0,mat->slvec1,ADD_VALUES,SCATTER_FORWARD,mat->sMvctx);CHKERRQ(ierr);
2547b1d4fb26SBarry Smith       ierr = VecRestoreArrayFast(xx,&x);CHKERRQ(ierr);
2548b1d4fb26SBarry Smith       ierr = VecRestoreArrayFast(bb,&b);CHKERRQ(ierr);
2549ffe4fb16SHong Zhang       ierr = VecScatterEnd(mat->slvec0,mat->slvec1,ADD_VALUES,SCATTER_FORWARD,mat->sMvctx);CHKERRQ(ierr);
2550ffe4fb16SHong Zhang 
2551ffe4fb16SHong Zhang       /* upper triangular part: bb1 = bb1 - B*x */
2552ffe4fb16SHong Zhang       ierr = (*mat->B->ops->multadd)(mat->B,mat->slvec1b,mat->slvec1a,bb1);CHKERRQ(ierr);
2553ffe4fb16SHong Zhang 
2554ffe4fb16SHong Zhang       /* local diagonal sweep */
2555ffe4fb16SHong Zhang       ierr = (*mat->A->ops->relax)(mat->A,bb1,omega,SOR_SYMMETRIC_SWEEP,fshift,lits,lits,xx);CHKERRQ(ierr);
2556ffe4fb16SHong Zhang     }
2557ffe4fb16SHong Zhang     ierr = VecDestroy(bb1);CHKERRQ(ierr);
2558ffe4fb16SHong Zhang   } else {
2559ffe4fb16SHong Zhang     SETERRQ(PETSC_ERR_SUP,"MatSORType is not supported for SBAIJ matrix format");
2560ffe4fb16SHong Zhang   }
2561ffe4fb16SHong Zhang   PetscFunctionReturn(0);
2562ffe4fb16SHong Zhang }
2563ffe4fb16SHong Zhang 
2564ffe4fb16SHong Zhang #undef __FUNCT__
2565ffe4fb16SHong Zhang #define __FUNCT__ "MatRelax_MPISBAIJ_2comm"
2566ffe4fb16SHong Zhang int MatRelax_MPISBAIJ_2comm(Mat matin,Vec bb,PetscReal omega,MatSORType flag,PetscReal fshift,int its,int lits,Vec xx)
2567ffe4fb16SHong Zhang {
2568ffe4fb16SHong Zhang   Mat_MPISBAIJ   *mat = (Mat_MPISBAIJ*)matin->data;
25692798e883SHong Zhang   int            ierr;
2570d05c616dSSatish Balay   PetscScalar    mone=-1.0;
25712798e883SHong Zhang   Vec            lvec1,bb1;
25722798e883SHong Zhang 
25732798e883SHong Zhang   PetscFunctionBegin;
257491723122SBarry Smith   if (its <= 0 || lits <= 0) SETERRQ2(PETSC_ERR_ARG_WRONG,"Relaxation requires global its %d and local its %d both positive",its,lits);
25752798e883SHong Zhang   if (mat->bs > 1)
25762798e883SHong Zhang     SETERRQ(PETSC_ERR_SUP,"SSOR for block size > 1 is not yet implemented");
25772798e883SHong Zhang 
2578c14dc6b6SHong Zhang   if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP){
25792798e883SHong Zhang     if ( flag & SOR_ZERO_INITIAL_GUESS ) {
2580bd3bf7d3SHong Zhang       ierr = (*mat->A->ops->relax)(mat->A,bb,omega,flag,fshift,lits,lits,xx);CHKERRQ(ierr);
25812798e883SHong Zhang       its--;
25822798e883SHong Zhang     }
25832798e883SHong Zhang 
25842798e883SHong Zhang     ierr = VecDuplicate(mat->lvec,&lvec1);CHKERRQ(ierr);
25852798e883SHong Zhang     ierr = VecDuplicate(bb,&bb1);CHKERRQ(ierr);
25862798e883SHong Zhang     while (its--){
25872798e883SHong Zhang       ierr = VecScatterBegin(xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD,mat->Mvctx);CHKERRQ(ierr);
25882798e883SHong Zhang 
25892798e883SHong Zhang       /* lower diagonal part: bb1 = bb - B^T*xx */
25902798e883SHong Zhang       ierr = (*mat->B->ops->multtranspose)(mat->B,xx,lvec1);CHKERRQ(ierr);
25912798e883SHong Zhang       ierr = VecScale(&mone,lvec1);CHKERRQ(ierr);
25922798e883SHong Zhang 
25932798e883SHong Zhang       ierr = VecScatterEnd(xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD,mat->Mvctx);CHKERRQ(ierr);
25942798e883SHong Zhang       ierr = VecCopy(bb,bb1);CHKERRQ(ierr);
25952798e883SHong Zhang       ierr = VecScatterBegin(lvec1,bb1,ADD_VALUES,SCATTER_REVERSE,mat->Mvctx);CHKERRQ(ierr);
25962798e883SHong Zhang 
25972798e883SHong Zhang       /* upper diagonal part: bb1 = bb1 - B*x */
25982798e883SHong Zhang       ierr = VecScale(&mone,mat->lvec);CHKERRQ(ierr);
25992798e883SHong Zhang       ierr = (*mat->B->ops->multadd)(mat->B,mat->lvec,bb1,bb1);CHKERRQ(ierr);
26002798e883SHong Zhang 
26012798e883SHong Zhang       ierr = VecScatterEnd(lvec1,bb1,ADD_VALUES,SCATTER_REVERSE,mat->Mvctx);CHKERRQ(ierr);
26022798e883SHong Zhang 
2603c14dc6b6SHong Zhang       /* diagonal sweep */
2604bd3bf7d3SHong Zhang       ierr = (*mat->A->ops->relax)(mat->A,bb1,omega,SOR_SYMMETRIC_SWEEP,fshift,lits,lits,xx);CHKERRQ(ierr);
26052798e883SHong Zhang     }
26062798e883SHong Zhang     ierr = VecDestroy(lvec1);CHKERRQ(ierr);
26072798e883SHong Zhang     ierr = VecDestroy(bb1);CHKERRQ(ierr);
2608c14dc6b6SHong Zhang   } else {
2609c14dc6b6SHong Zhang     SETERRQ(PETSC_ERR_SUP,"MatSORType is not supported for SBAIJ matrix format");
2610c14dc6b6SHong Zhang   }
26112798e883SHong Zhang   PetscFunctionReturn(0);
26122798e883SHong Zhang }
26132798e883SHong Zhang 
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