xref: /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c (revision f2a5309cf2bd60e875de7457ab3728dd4e42fdc5)
1*f2a5309cSSatish Balay /*$Id: mpisbaij.c,v 1.45 2001/03/07 19:05:15 balay Exp balay $*/
2a30f8f8cSSatish Balay 
3c8117e22SSatish Balay #include "src/mat/impls/baij/mpi/mpibaij.h"    /*I "petscmat.h" I*/
4a30f8f8cSSatish Balay #include "src/vec/vecimpl.h"
5a30f8f8cSSatish Balay #include "mpisbaij.h"
6a30f8f8cSSatish Balay #include "src/mat/impls/sbaij/seq/sbaij.h"
7a30f8f8cSSatish Balay 
8a30f8f8cSSatish Balay extern int MatSetUpMultiply_MPISBAIJ(Mat);
9a30f8f8cSSatish Balay extern int DisAssemble_MPISBAIJ(Mat);
10a30f8f8cSSatish Balay extern int MatIncreaseOverlap_MPISBAIJ(Mat,int,IS *,int);
11a30f8f8cSSatish Balay extern int MatGetSubMatrices_MPISBAIJ(Mat,int,IS *,IS *,MatReuse,Mat **);
12a30f8f8cSSatish Balay extern int MatGetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *);
13a30f8f8cSSatish Balay extern int MatSetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *,InsertMode);
14a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ(Mat,int,int*,int,int*,Scalar*,InsertMode);
15a30f8f8cSSatish Balay extern int MatGetRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
16a30f8f8cSSatish Balay extern int MatRestoreRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
17a30f8f8cSSatish Balay extern int MatPrintHelp_SeqSBAIJ(Mat);
18a30f8f8cSSatish Balay extern int MatZeroRows_SeqSBAIJ(Mat,IS,Scalar*);
1900319c27SSatish Balay extern int MatZeroRows_SeqBAIJ(Mat,IS,Scalar *);
20d0566740SHong Zhang extern int MatGetRowMax_MPISBAIJ(Mat,Vec);
21a30f8f8cSSatish Balay 
22a30f8f8cSSatish Balay /*  UGLY, ugly, ugly
23a30f8f8cSSatish Balay    When MatScalar == Scalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
24a30f8f8cSSatish Balay    not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
25a30f8f8cSSatish Balay    inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
26a30f8f8cSSatish Balay    converts the entries into single precision and then calls ..._MatScalar() to put them
27a30f8f8cSSatish Balay    into the single precision data structures.
28a30f8f8cSSatish Balay */
29a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
30a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
31a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
32a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
33a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
34a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
35a30f8f8cSSatish Balay #else
36a30f8f8cSSatish Balay #define MatSetValuesBlocked_SeqSBAIJ_MatScalar      MatSetValuesBlocked_SeqSBAIJ
37a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_MatScalar             MatSetValues_MPISBAIJ
38a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_MatScalar      MatSetValuesBlocked_MPISBAIJ
39a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_HT_MatScalar          MatSetValues_MPISBAIJ_HT
40a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_HT_MatScalar   MatSetValuesBlocked_MPISBAIJ_HT
41a30f8f8cSSatish Balay #endif
42a30f8f8cSSatish Balay 
43a30f8f8cSSatish Balay EXTERN_C_BEGIN
44a30f8f8cSSatish Balay #undef __FUNC__
45b0a32e0cSBarry Smith #define __FUNC__ "MatStoreValues_MPISBAIJ"
46a30f8f8cSSatish Balay int MatStoreValues_MPISBAIJ(Mat mat)
47a30f8f8cSSatish Balay {
48f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
49a30f8f8cSSatish Balay   int          ierr;
50a30f8f8cSSatish Balay 
51a30f8f8cSSatish Balay   PetscFunctionBegin;
52a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
53a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
54a30f8f8cSSatish Balay   PetscFunctionReturn(0);
55a30f8f8cSSatish Balay }
56a30f8f8cSSatish Balay EXTERN_C_END
57a30f8f8cSSatish Balay 
58a30f8f8cSSatish Balay EXTERN_C_BEGIN
59a30f8f8cSSatish Balay #undef __FUNC__
60b0a32e0cSBarry Smith #define __FUNC__ "MatRetrieveValues_MPISBAIJ"
61a30f8f8cSSatish Balay int MatRetrieveValues_MPISBAIJ(Mat mat)
62a30f8f8cSSatish Balay {
63f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
64a30f8f8cSSatish Balay   int          ierr;
65a30f8f8cSSatish Balay 
66a30f8f8cSSatish Balay   PetscFunctionBegin;
67a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
68a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
69a30f8f8cSSatish Balay   PetscFunctionReturn(0);
70a30f8f8cSSatish Balay }
71a30f8f8cSSatish Balay EXTERN_C_END
72a30f8f8cSSatish Balay 
73a30f8f8cSSatish Balay /*
74a30f8f8cSSatish Balay      Local utility routine that creates a mapping from the global column
75a30f8f8cSSatish Balay    number to the local number in the off-diagonal part of the local
76a30f8f8cSSatish Balay    storage of the matrix.  This is done in a non scable way since the
77a30f8f8cSSatish Balay    length of colmap equals the global matrix length.
78a30f8f8cSSatish Balay */
79a30f8f8cSSatish Balay #undef __FUNC__
80b0a32e0cSBarry Smith #define __FUNC__ "CreateColmap_MPISBAIJ_Private"
81a30f8f8cSSatish Balay static int CreateColmap_MPISBAIJ_Private(Mat mat)
82a30f8f8cSSatish Balay {
83a30f8f8cSSatish Balay   PetscFunctionBegin;
8429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
8596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
86a30f8f8cSSatish Balay }
87a30f8f8cSSatish Balay 
88a30f8f8cSSatish Balay #define CHUNKSIZE  10
89a30f8f8cSSatish Balay 
90a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv) \
91a30f8f8cSSatish Balay { \
92a30f8f8cSSatish Balay  \
93a30f8f8cSSatish Balay     brow = row/bs;  \
94a30f8f8cSSatish Balay     rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
95a30f8f8cSSatish Balay     rmax = aimax[brow]; nrow = ailen[brow]; \
96a30f8f8cSSatish Balay       bcol = col/bs; \
97a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
98a30f8f8cSSatish Balay       low = 0; high = nrow; \
99a30f8f8cSSatish Balay       while (high-low > 3) { \
100a30f8f8cSSatish Balay         t = (low+high)/2; \
101a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
102a30f8f8cSSatish Balay         else              low  = t; \
103a30f8f8cSSatish Balay       } \
104a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
105a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
106a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
107a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
108a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
109a30f8f8cSSatish Balay           else                    *bap  = value;  \
110a30f8f8cSSatish Balay           goto a_noinsert; \
111a30f8f8cSSatish Balay         } \
112a30f8f8cSSatish Balay       } \
113a30f8f8cSSatish Balay       if (a->nonew == 1) goto a_noinsert; \
11429bbc08cSBarry Smith       else if (a->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
115a30f8f8cSSatish Balay       if (nrow >= rmax) { \
116a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
117a30f8f8cSSatish Balay         int       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
118a30f8f8cSSatish Balay         MatScalar *new_a; \
119a30f8f8cSSatish Balay  \
12029bbc08cSBarry Smith         if (a->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
121a30f8f8cSSatish Balay  \
122a30f8f8cSSatish Balay         /* malloc new storage space */ \
123a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(int); \
12482502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
125a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
126a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
127a30f8f8cSSatish Balay  \
128a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
129a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
130a30f8f8cSSatish Balay         for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
131a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
132a30f8f8cSSatish Balay         len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
133a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
134a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
135a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(Scalar));CHKERRQ(ierr); \
136a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
137a30f8f8cSSatish Balay                     aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
138a30f8f8cSSatish Balay         /* free up old matrix storage */ \
139a30f8f8cSSatish Balay         ierr = PetscFree(a->a);CHKERRQ(ierr);  \
140a30f8f8cSSatish Balay         if (!a->singlemalloc) { \
141a30f8f8cSSatish Balay           ierr = PetscFree(a->i);CHKERRQ(ierr); \
142a30f8f8cSSatish Balay           ierr = PetscFree(a->j);CHKERRQ(ierr);\
143a30f8f8cSSatish Balay         } \
144a30f8f8cSSatish Balay         aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
145a30f8f8cSSatish Balay         a->singlemalloc = PETSC_TRUE; \
146a30f8f8cSSatish Balay  \
147a30f8f8cSSatish Balay         rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
148a30f8f8cSSatish Balay         rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
149b0a32e0cSBarry Smith         PetscLogObjectMemory(A,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
150a30f8f8cSSatish Balay         a->s_maxnz += bs2*CHUNKSIZE; \
151a30f8f8cSSatish Balay         a->reallocs++; \
152a30f8f8cSSatish Balay         a->s_nz++; \
153a30f8f8cSSatish Balay       } \
154a30f8f8cSSatish Balay       N = nrow++ - 1;  \
155a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
156a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
157a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
158a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
159a30f8f8cSSatish Balay       } \
160a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
161a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
162a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
163a30f8f8cSSatish Balay       a_noinsert:; \
164a30f8f8cSSatish Balay     ailen[brow] = nrow; \
165a30f8f8cSSatish Balay }
166a30f8f8cSSatish Balay #ifndef MatSetValues_SeqBAIJ_B_Private
167a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv) \
168a30f8f8cSSatish Balay { \
169a30f8f8cSSatish Balay     brow = row/bs;  \
170a30f8f8cSSatish Balay     rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
171a30f8f8cSSatish Balay     rmax = bimax[brow]; nrow = bilen[brow]; \
172a30f8f8cSSatish Balay       bcol = col/bs; \
173a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
174a30f8f8cSSatish Balay       low = 0; high = nrow; \
175a30f8f8cSSatish Balay       while (high-low > 3) { \
176a30f8f8cSSatish Balay         t = (low+high)/2; \
177a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
178a30f8f8cSSatish Balay         else              low  = t; \
179a30f8f8cSSatish Balay       } \
180a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
181a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
182a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
183a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
184a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
185a30f8f8cSSatish Balay           else                    *bap  = value;  \
186a30f8f8cSSatish Balay           goto b_noinsert; \
187a30f8f8cSSatish Balay         } \
188a30f8f8cSSatish Balay       } \
189a30f8f8cSSatish Balay       if (b->nonew == 1) goto b_noinsert; \
19029bbc08cSBarry Smith       else if (b->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
191a30f8f8cSSatish Balay       if (nrow >= rmax) { \
192a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
193a30f8f8cSSatish Balay         int       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
194a30f8f8cSSatish Balay         MatScalar *new_a; \
195a30f8f8cSSatish Balay  \
19629bbc08cSBarry Smith         if (b->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
197a30f8f8cSSatish Balay  \
198a30f8f8cSSatish Balay         /* malloc new storage space */ \
199a30f8f8cSSatish Balay         len   = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(int); \
20082502324SSatish Balay         ierr  = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
201a30f8f8cSSatish Balay         new_j = (int*)(new_a + bs2*new_nz); \
202a30f8f8cSSatish Balay         new_i = new_j + new_nz; \
203a30f8f8cSSatish Balay  \
204a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
205a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
206a30f8f8cSSatish Balay         for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
207a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
208a30f8f8cSSatish Balay         len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
209a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
210a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
211a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
212a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
213a30f8f8cSSatish Balay                     ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
214a30f8f8cSSatish Balay         /* free up old matrix storage */ \
215a30f8f8cSSatish Balay         ierr = PetscFree(b->a);CHKERRQ(ierr);  \
216a30f8f8cSSatish Balay         if (!b->singlemalloc) { \
217a30f8f8cSSatish Balay           ierr = PetscFree(b->i);CHKERRQ(ierr); \
218a30f8f8cSSatish Balay           ierr = PetscFree(b->j);CHKERRQ(ierr); \
219a30f8f8cSSatish Balay         } \
220a30f8f8cSSatish Balay         ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
221a30f8f8cSSatish Balay         b->singlemalloc = PETSC_TRUE; \
222a30f8f8cSSatish Balay  \
223a30f8f8cSSatish Balay         rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
224a30f8f8cSSatish Balay         rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
225b0a32e0cSBarry Smith         PetscLogObjectMemory(B,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
226a30f8f8cSSatish Balay         b->maxnz += bs2*CHUNKSIZE; \
227a30f8f8cSSatish Balay         b->reallocs++; \
228a30f8f8cSSatish Balay         b->nz++; \
229a30f8f8cSSatish Balay       } \
230a30f8f8cSSatish Balay       N = nrow++ - 1;  \
231a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
232a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
233a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
234a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
235a30f8f8cSSatish Balay       } \
236a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
237a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
238a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
239a30f8f8cSSatish Balay       b_noinsert:; \
240a30f8f8cSSatish Balay     bilen[brow] = nrow; \
241a30f8f8cSSatish Balay }
242a30f8f8cSSatish Balay #endif
243a30f8f8cSSatish Balay 
244a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
245a30f8f8cSSatish Balay #undef __FUNC__
246b0a32e0cSBarry Smith #define __FUNC__ "MatSetValues_MPISBAIJ"
247a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
248a30f8f8cSSatish Balay {
249a30f8f8cSSatish Balay   Mat_MPISBAIJ *b = (Mat_MPISBAIJ*)mat->data;
250a30f8f8cSSatish Balay   int          ierr,i,N = m*n;
251a30f8f8cSSatish Balay   MatScalar    *vsingle;
252a30f8f8cSSatish Balay 
253a30f8f8cSSatish Balay   PetscFunctionBegin;
254a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
255a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
25682502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
257a30f8f8cSSatish Balay     b->setvalueslen  = N;
258a30f8f8cSSatish Balay   }
259a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
260a30f8f8cSSatish Balay 
261a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
262a30f8f8cSSatish Balay     vsingle[i] = v[i];
263a30f8f8cSSatish Balay   }
264a30f8f8cSSatish Balay   ierr = MatSetValues_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
265a30f8f8cSSatish Balay   PetscFunctionReturn(0);
266a30f8f8cSSatish Balay }
267a30f8f8cSSatish Balay 
268a30f8f8cSSatish Balay #undef __FUNC__
269b0a32e0cSBarry Smith #define __FUNC__ "MatSetValuesBlocked_MPISBAIJ"
270a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
271a30f8f8cSSatish Balay {
272a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
273a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
274a30f8f8cSSatish Balay   MatScalar   *vsingle;
275a30f8f8cSSatish Balay 
276a30f8f8cSSatish Balay   PetscFunctionBegin;
277a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
278a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
27982502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
280a30f8f8cSSatish Balay     b->setvalueslen  = N;
281a30f8f8cSSatish Balay   }
282a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
283a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
284a30f8f8cSSatish Balay     vsingle[i] = v[i];
285a30f8f8cSSatish Balay   }
286a30f8f8cSSatish Balay   ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
287a30f8f8cSSatish Balay   PetscFunctionReturn(0);
288a30f8f8cSSatish Balay }
289a30f8f8cSSatish Balay 
290a30f8f8cSSatish Balay #undef __FUNC__
291b0a32e0cSBarry Smith #define __FUNC__ "MatSetValues_MPISBAIJ_HT"
292a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
293a30f8f8cSSatish Balay {
294a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
295a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
296a30f8f8cSSatish Balay   MatScalar   *vsingle;
297a30f8f8cSSatish Balay 
298a30f8f8cSSatish Balay   PetscFunctionBegin;
29929bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3004d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
301a30f8f8cSSatish Balay }
302a30f8f8cSSatish Balay 
303a30f8f8cSSatish Balay #undef __FUNC__
304b0a32e0cSBarry Smith #define __FUNC__ "MatSetValuesBlocked_MPISBAIJ_HT"
305a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
306a30f8f8cSSatish Balay {
307a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
308a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
309a30f8f8cSSatish Balay   MatScalar   *vsingle;
310a30f8f8cSSatish Balay 
311a30f8f8cSSatish Balay   PetscFunctionBegin;
31229bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3134d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
314a30f8f8cSSatish Balay }
315a30f8f8cSSatish Balay #endif
316a30f8f8cSSatish Balay 
317a30f8f8cSSatish Balay /* Only add/insert a(i,j) with i<=j (blocks).
318a30f8f8cSSatish Balay    Any a(i,j) with i>j input by user is ingored.
319a30f8f8cSSatish Balay */
320a30f8f8cSSatish Balay #undef __FUNC__
321b0a32e0cSBarry Smith #define __FUNC__ "MatSetValues_MPIBAIJ"
322a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
323a30f8f8cSSatish Balay {
324a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
325a30f8f8cSSatish Balay   MatScalar    value;
326b5df2d14SHong Zhang   PetscTruth   roworiented = baij->roworiented;
327a30f8f8cSSatish Balay   int          ierr,i,j,row,col;
328b5df2d14SHong Zhang   int          rstart_orig=baij->rstart_bs;
329a30f8f8cSSatish Balay   int          rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
330a30f8f8cSSatish Balay   int          cend_orig=baij->cend_bs,bs=baij->bs;
331a30f8f8cSSatish Balay 
332a30f8f8cSSatish Balay   /* Some Variables required in the macro */
333a30f8f8cSSatish Balay   Mat          A = baij->A;
334a30f8f8cSSatish Balay   Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)(A)->data;
335a30f8f8cSSatish Balay   int          *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
336a30f8f8cSSatish Balay   MatScalar    *aa=a->a;
337a30f8f8cSSatish Balay 
338a30f8f8cSSatish Balay   Mat          B = baij->B;
339a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(B)->data;
340a30f8f8cSSatish Balay   int          *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
341a30f8f8cSSatish Balay   MatScalar    *ba=b->a;
342a30f8f8cSSatish Balay 
343a30f8f8cSSatish Balay   int          *rp,ii,nrow,_i,rmax,N,brow,bcol;
344a30f8f8cSSatish Balay   int          low,high,t,ridx,cidx,bs2=a->bs2;
345a30f8f8cSSatish Balay   MatScalar    *ap,*bap;
346a30f8f8cSSatish Balay 
347a30f8f8cSSatish Balay   /* for stash */
348f65c83cfSHong Zhang   int          n_loc, *in_loc=0;
349f65c83cfSHong Zhang   MatScalar    *v_loc=0;
350a30f8f8cSSatish Balay 
351a30f8f8cSSatish Balay   PetscFunctionBegin;
352a30f8f8cSSatish Balay 
353a30f8f8cSSatish Balay   if(!baij->donotstash){
35482502324SSatish Balay     ierr = PetscMalloc(n*sizeof(int),&in_loc);CHKERRQ(ierr);
35582502324SSatish Balay     ierr = PetscMalloc(n*sizeof(MatScalar),&v_loc);CHKERRQ(ierr);
356a30f8f8cSSatish Balay   }
357a30f8f8cSSatish Balay 
358a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
359a30f8f8cSSatish Balay     if (im[i] < 0) continue;
360a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
361b5df2d14SHong Zhang     if (im[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
362a30f8f8cSSatish Balay #endif
363a30f8f8cSSatish Balay     if (im[i] >= rstart_orig && im[i] < rend_orig) { /* this processor entry */
364a30f8f8cSSatish Balay       row = im[i] - rstart_orig;              /* local row index */
365a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
366f65c83cfSHong Zhang         if (im[i]/bs > in[j]/bs) continue;    /* ignore lower triangular blocks */
367a30f8f8cSSatish Balay         if (in[j] >= cstart_orig && in[j] < cend_orig){  /* diag entry (A) */
368a30f8f8cSSatish Balay           col = in[j] - cstart_orig;          /* local col index */
369a30f8f8cSSatish Balay           brow = row/bs; bcol = col/bs;
370a30f8f8cSSatish Balay           if (brow > bcol) continue;  /* ignore lower triangular blocks of A */
371a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
372a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv);
373a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
374a30f8f8cSSatish Balay         } else if (in[j] < 0) continue;
375a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
376b5df2d14SHong Zhang         else if (in[j] >= mat->N) {SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Col too large");}
377a30f8f8cSSatish Balay #endif
378a30f8f8cSSatish Balay         else {  /* off-diag entry (B) */
379a30f8f8cSSatish Balay           if (mat->was_assembled) {
380a30f8f8cSSatish Balay             if (!baij->colmap) {
381a30f8f8cSSatish Balay               ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
382a30f8f8cSSatish Balay             }
383a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
384a30f8f8cSSatish Balay             ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
385a30f8f8cSSatish Balay             col  = col - 1 + in[j]%bs;
386a30f8f8cSSatish Balay #else
387a30f8f8cSSatish Balay             col = baij->colmap[in[j]/bs] - 1 + in[j]%bs;
388a30f8f8cSSatish Balay #endif
389a30f8f8cSSatish Balay             if (col < 0 && !((Mat_SeqSBAIJ*)(baij->A->data))->nonew) {
390a30f8f8cSSatish Balay               ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
391a30f8f8cSSatish Balay               col =  in[j];
392a30f8f8cSSatish Balay               /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
393a30f8f8cSSatish Balay               B = baij->B;
394a30f8f8cSSatish Balay               b = (Mat_SeqBAIJ*)(B)->data;
395a30f8f8cSSatish Balay               bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
396a30f8f8cSSatish Balay               ba=b->a;
397a30f8f8cSSatish Balay             }
398a30f8f8cSSatish Balay           } else col = in[j];
399a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
400a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv);
401a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
402a30f8f8cSSatish Balay         }
403a30f8f8cSSatish Balay       }
404a30f8f8cSSatish Balay     } else {  /* off processor entry */
405a30f8f8cSSatish Balay       if (!baij->donotstash) {
406a30f8f8cSSatish Balay         n_loc = 0;
407a30f8f8cSSatish Balay         for (j=0; j<n; j++){
408f65c83cfSHong Zhang           if (im[i]/bs > in[j]/bs) continue; /* ignore lower triangular blocks */
409a30f8f8cSSatish Balay           in_loc[n_loc] = in[j];
410a30f8f8cSSatish Balay           if (roworiented) {
411a30f8f8cSSatish Balay             v_loc[n_loc] = v[i*n+j];
412a30f8f8cSSatish Balay           } else {
413a30f8f8cSSatish Balay             v_loc[n_loc] = v[j*m+i];
414a30f8f8cSSatish Balay           }
415a30f8f8cSSatish Balay           n_loc++;
416a30f8f8cSSatish Balay         }
417a30f8f8cSSatish Balay         ierr = MatStashValuesRow_Private(&mat->stash,im[i],n_loc,in_loc,v_loc);CHKERRQ(ierr);
418a30f8f8cSSatish Balay       }
419a30f8f8cSSatish Balay     }
420a30f8f8cSSatish Balay   }
421a30f8f8cSSatish Balay 
422a30f8f8cSSatish Balay   if(!baij->donotstash){
423a30f8f8cSSatish Balay     ierr = PetscFree(in_loc);CHKERRQ(ierr);
424a30f8f8cSSatish Balay     ierr = PetscFree(v_loc);CHKERRQ(ierr);
425a30f8f8cSSatish Balay   }
426a30f8f8cSSatish Balay   PetscFunctionReturn(0);
427a30f8f8cSSatish Balay }
428a30f8f8cSSatish Balay 
429a30f8f8cSSatish Balay #undef __FUNC__
430b0a32e0cSBarry Smith #define __FUNC__ "MatSetValuesBlocked_MPISBAIJ"
431a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
432a30f8f8cSSatish Balay {
433a30f8f8cSSatish Balay   PetscFunctionBegin;
43429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
43596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
436a30f8f8cSSatish Balay }
437a30f8f8cSSatish Balay 
438a30f8f8cSSatish Balay #define HASH_KEY 0.6180339887
439a30f8f8cSSatish Balay #define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(int)((size)*(tmp-(int)tmp)))
440a30f8f8cSSatish Balay /* #define HASH(size,key) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
441a30f8f8cSSatish Balay /* #define HASH(size,key,tmp) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
442a30f8f8cSSatish Balay #undef __FUNC__
443b0a32e0cSBarry Smith #define __FUNC__ "MatSetValues_MPISBAIJ_HT_MatScalar"
444a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
445a30f8f8cSSatish Balay {
446a30f8f8cSSatish Balay   PetscFunctionBegin;
44729bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
44896e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
449a30f8f8cSSatish Balay }
450a30f8f8cSSatish Balay 
451a30f8f8cSSatish Balay #undef __FUNC__
452b0a32e0cSBarry Smith #define __FUNC__ "MatSetValuesBlocked_MPISBAIJ_HT_MatScalar"
453a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
454a30f8f8cSSatish Balay {
455a30f8f8cSSatish Balay   PetscFunctionBegin;
45629bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
45796e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
458a30f8f8cSSatish Balay }
459a30f8f8cSSatish Balay 
460a30f8f8cSSatish Balay #undef __FUNC__
461b0a32e0cSBarry Smith #define __FUNC__ "MatGetValues_MPISBAIJ"
462a30f8f8cSSatish Balay int MatGetValues_MPISBAIJ(Mat mat,int m,int *idxm,int n,int *idxn,Scalar *v)
463a30f8f8cSSatish Balay {
464f3566a2aSHong Zhang   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
465a30f8f8cSSatish Balay   int          bs=baij->bs,ierr,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
466a30f8f8cSSatish Balay   int          bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;
467a30f8f8cSSatish Balay 
468a30f8f8cSSatish Balay   PetscFunctionBegin;
469a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
47029bbc08cSBarry Smith     if (idxm[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
471b5df2d14SHong Zhang     if (idxm[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
472a30f8f8cSSatish Balay     if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
473a30f8f8cSSatish Balay       row = idxm[i] - bsrstart;
474a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
47529bbc08cSBarry Smith         if (idxn[j] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative column");
476b5df2d14SHong Zhang         if (idxn[j] >= mat->N) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
477a30f8f8cSSatish Balay         if (idxn[j] >= bscstart && idxn[j] < bscend){
478a30f8f8cSSatish Balay           col = idxn[j] - bscstart;
479c8407628SSatish Balay           ierr = MatGetValues_SeqSBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
480a30f8f8cSSatish Balay         } else {
481a30f8f8cSSatish Balay           if (!baij->colmap) {
482a30f8f8cSSatish Balay             ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
483a30f8f8cSSatish Balay           }
484a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
485a30f8f8cSSatish Balay           ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
486a30f8f8cSSatish Balay           data --;
487a30f8f8cSSatish Balay #else
488a30f8f8cSSatish Balay           data = baij->colmap[idxn[j]/bs]-1;
489a30f8f8cSSatish Balay #endif
490a30f8f8cSSatish Balay           if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
491a30f8f8cSSatish Balay           else {
492a30f8f8cSSatish Balay             col  = data + idxn[j]%bs;
493c8407628SSatish Balay             ierr = MatGetValues_SeqSBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
494a30f8f8cSSatish Balay           }
495a30f8f8cSSatish Balay         }
496a30f8f8cSSatish Balay       }
497a30f8f8cSSatish Balay     } else {
49829bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
499a30f8f8cSSatish Balay     }
500a30f8f8cSSatish Balay   }
501a30f8f8cSSatish Balay  PetscFunctionReturn(0);
502a30f8f8cSSatish Balay }
503a30f8f8cSSatish Balay 
504a30f8f8cSSatish Balay #undef __FUNC__
505b0a32e0cSBarry Smith #define __FUNC__ "MatNorm_MPISBAIJ"
506a30f8f8cSSatish Balay int MatNorm_MPISBAIJ(Mat mat,NormType type,PetscReal *norm)
507a30f8f8cSSatish Balay {
508a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
509bc0ba53dSHong Zhang   /* Mat_SeqSBAIJ *amat = (Mat_SeqSBAIJ*)baij->A->data; */
510bc0ba53dSHong Zhang   /* Mat_SeqBAIJ  *bmat = (Mat_SeqBAIJ*)baij->B->data; */
511a30f8f8cSSatish Balay   int        ierr;
512a30f8f8cSSatish Balay   PetscReal  sum[2],*lnorm2;
513a30f8f8cSSatish Balay 
514a30f8f8cSSatish Balay   PetscFunctionBegin;
515a30f8f8cSSatish Balay   if (baij->size == 1) {
516a30f8f8cSSatish Balay     ierr =  MatNorm(baij->A,type,norm);CHKERRQ(ierr);
517a30f8f8cSSatish Balay   } else {
518a30f8f8cSSatish Balay     if (type == NORM_FROBENIUS) {
51982502324SSatish Balay       ierr = PetscMalloc(2*sizeof(double),&lnorm2);CHKERRQ(ierr);
520a30f8f8cSSatish Balay       ierr =  MatNorm(baij->A,type,lnorm2);CHKERRQ(ierr);
521a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2++;            /* squar power of norm(A) */
522a30f8f8cSSatish Balay       ierr =  MatNorm(baij->B,type,lnorm2);CHKERRQ(ierr);
523a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2--;             /* squar power of norm(B) */
524a30f8f8cSSatish Balay       /*
525a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
526a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], lnorm2=%g, %g\n",rank,lnorm2[0],lnorm2[1]);
527a30f8f8cSSatish Balay       */
528a30f8f8cSSatish Balay       ierr = MPI_Allreduce(lnorm2,&sum,2,MPI_DOUBLE,MPI_SUM,mat->comm);CHKERRQ(ierr);
529a30f8f8cSSatish Balay       /*
530a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], sum=%g, %g\n",rank,sum[0],sum[1]);
531a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD); */
532a30f8f8cSSatish Balay 
533a30f8f8cSSatish Balay       *norm = sqrt(sum[0] + 2*sum[1]);
534a30f8f8cSSatish Balay       ierr = PetscFree(lnorm2);CHKERRQ(ierr);
535a30f8f8cSSatish Balay     } else {
53629bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
537a30f8f8cSSatish Balay     }
538a30f8f8cSSatish Balay   }
539a30f8f8cSSatish Balay   PetscFunctionReturn(0);
540a30f8f8cSSatish Balay }
541a30f8f8cSSatish Balay 
542a30f8f8cSSatish Balay /*
543a30f8f8cSSatish Balay   Creates the hash table, and sets the table
544a30f8f8cSSatish Balay   This table is created only once.
545a30f8f8cSSatish Balay   If new entried need to be added to the matrix
546a30f8f8cSSatish Balay   then the hash table has to be destroyed and
547a30f8f8cSSatish Balay   recreated.
548a30f8f8cSSatish Balay */
549a30f8f8cSSatish Balay #undef __FUNC__
550b0a32e0cSBarry Smith #define __FUNC__ "MatCreateHashTable_MPISBAIJ_Private"
551a30f8f8cSSatish Balay int MatCreateHashTable_MPISBAIJ_Private(Mat mat,PetscReal factor)
552a30f8f8cSSatish Balay {
553a30f8f8cSSatish Balay   PetscFunctionBegin;
55429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
55596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
556a30f8f8cSSatish Balay }
557a30f8f8cSSatish Balay 
558a30f8f8cSSatish Balay #undef __FUNC__
559b0a32e0cSBarry Smith #define __FUNC__ "MatAssemblyBegin_MPISBAIJ"
560a30f8f8cSSatish Balay int MatAssemblyBegin_MPISBAIJ(Mat mat,MatAssemblyType mode)
561a30f8f8cSSatish Balay {
562a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
563a30f8f8cSSatish Balay   int         ierr,nstash,reallocs;
564a30f8f8cSSatish Balay   InsertMode  addv;
565a30f8f8cSSatish Balay 
566a30f8f8cSSatish Balay   PetscFunctionBegin;
567a30f8f8cSSatish Balay   if (baij->donotstash) {
568a30f8f8cSSatish Balay     PetscFunctionReturn(0);
569a30f8f8cSSatish Balay   }
570a30f8f8cSSatish Balay 
571a30f8f8cSSatish Balay   /* make sure all processors are either in INSERTMODE or ADDMODE */
572a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
573a30f8f8cSSatish Balay   if (addv == (ADD_VALUES|INSERT_VALUES)) {
57429bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
575a30f8f8cSSatish Balay   }
576a30f8f8cSSatish Balay   mat->insertmode = addv; /* in case this processor had no cache */
577a30f8f8cSSatish Balay 
578a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
579a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
580a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
581b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Stash has %d entries,uses %d mallocs.\n",nstash,reallocs);
582a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
583b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Block-Stash has %d entries, uses %d mallocs.\n",nstash,reallocs);
584a30f8f8cSSatish Balay   PetscFunctionReturn(0);
585a30f8f8cSSatish Balay }
586a30f8f8cSSatish Balay 
587a30f8f8cSSatish Balay #undef __FUNC__
588b0a32e0cSBarry Smith #define __FUNC__ "MatAssemblyEnd_MPISBAIJ"
589a30f8f8cSSatish Balay int MatAssemblyEnd_MPISBAIJ(Mat mat,MatAssemblyType mode)
590a30f8f8cSSatish Balay {
591a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij=(Mat_MPISBAIJ*)mat->data;
592a30f8f8cSSatish Balay   Mat_SeqSBAIJ  *a=(Mat_SeqSBAIJ*)baij->A->data;
593a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b=(Mat_SeqBAIJ*)baij->B->data;
594a30f8f8cSSatish Balay   int         i,j,rstart,ncols,n,ierr,flg,bs2=baij->bs2;
595a30f8f8cSSatish Balay   int         *row,*col,other_disassembled;
596a30f8f8cSSatish Balay   PetscTruth  r1,r2,r3;
597a30f8f8cSSatish Balay   MatScalar   *val;
598a30f8f8cSSatish Balay   InsertMode  addv = mat->insertmode;
5996f651dedSSatish Balay   /* int         rank;*/
600a30f8f8cSSatish Balay 
601a30f8f8cSSatish Balay   PetscFunctionBegin;
602a30f8f8cSSatish Balay   /* remove 2 line below later */
6036f651dedSSatish Balay   /*ierr = MPI_Comm_rank(PETSC_COMM_WORLD, &rank);CHKERRQ(ierr); */
604a30f8f8cSSatish Balay 
605a30f8f8cSSatish Balay   if (!baij->donotstash) {
606a30f8f8cSSatish Balay     while (1) {
607a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
608a30f8f8cSSatish Balay       /*
609a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d]: in AssemblyEnd, stash, flg=%d\n",rank,flg);
610a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD);
611a30f8f8cSSatish Balay       */
612a30f8f8cSSatish Balay       if (!flg) break;
613a30f8f8cSSatish Balay 
614a30f8f8cSSatish Balay       for (i=0; i<n;) {
615a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
616a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
617a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
618a30f8f8cSSatish Balay         else       ncols = n-i;
619a30f8f8cSSatish Balay         /* Now assemble all these values with a single function call */
620a30f8f8cSSatish Balay         ierr = MatSetValues_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
621a30f8f8cSSatish Balay         i = j;
622a30f8f8cSSatish Balay       }
623a30f8f8cSSatish Balay     }
624a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
625a30f8f8cSSatish Balay     /* Now process the block-stash. Since the values are stashed column-oriented,
626a30f8f8cSSatish Balay        set the roworiented flag to column oriented, and after MatSetValues()
627a30f8f8cSSatish Balay        restore the original flags */
628a30f8f8cSSatish Balay     r1 = baij->roworiented;
629a30f8f8cSSatish Balay     r2 = a->roworiented;
630a30f8f8cSSatish Balay     r3 = b->roworiented;
631a30f8f8cSSatish Balay     baij->roworiented = PETSC_FALSE;
632a30f8f8cSSatish Balay     a->roworiented    = PETSC_FALSE;
633a30f8f8cSSatish Balay     b->roworiented    = PETSC_FALSE;
634a30f8f8cSSatish Balay     while (1) {
635a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
636a30f8f8cSSatish Balay       if (!flg) break;
637a30f8f8cSSatish Balay 
638a30f8f8cSSatish Balay       for (i=0; i<n;) {
639a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
640a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
641a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
642a30f8f8cSSatish Balay         else       ncols = n-i;
643a30f8f8cSSatish Balay         ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
644a30f8f8cSSatish Balay         i = j;
645a30f8f8cSSatish Balay       }
646a30f8f8cSSatish Balay     }
647a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
648a30f8f8cSSatish Balay     baij->roworiented = r1;
649a30f8f8cSSatish Balay     a->roworiented    = r2;
650a30f8f8cSSatish Balay     b->roworiented    = r3;
651a30f8f8cSSatish Balay   }
652a30f8f8cSSatish Balay 
653a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
654a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);
655a30f8f8cSSatish Balay 
656a30f8f8cSSatish Balay   /* determine if any processor has disassembled, if so we must
657a30f8f8cSSatish Balay      also disassemble ourselfs, in order that we may reassemble. */
658a30f8f8cSSatish Balay   /*
659a30f8f8cSSatish Balay      if nonzero structure of submatrix B cannot change then we know that
660a30f8f8cSSatish Balay      no processor disassembled thus we can skip this stuff
661a30f8f8cSSatish Balay   */
662a30f8f8cSSatish Balay   if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
663a30f8f8cSSatish Balay     ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
664a30f8f8cSSatish Balay     if (mat->was_assembled && !other_disassembled) {
665c8407628SSatish Balay       ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
666a30f8f8cSSatish Balay     }
667a30f8f8cSSatish Balay   }
668a30f8f8cSSatish Balay 
669a30f8f8cSSatish Balay   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
670a30f8f8cSSatish Balay     ierr = MatSetUpMultiply_MPISBAIJ(mat);CHKERRQ(ierr);
671a30f8f8cSSatish Balay   }
672a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
673a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);
674a30f8f8cSSatish Balay 
675a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
676a30f8f8cSSatish Balay   if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
677b0a32e0cSBarry Smith     PetscLogInfo(0,"MatAssemblyEnd_MPISBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((double)baij->ht_total_ct)/baij->ht_insert_ct);
678a30f8f8cSSatish Balay     baij->ht_total_ct  = 0;
679a30f8f8cSSatish Balay     baij->ht_insert_ct = 0;
680a30f8f8cSSatish Balay   }
681a30f8f8cSSatish Balay #endif
682a30f8f8cSSatish Balay   if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
683c8407628SSatish Balay     ierr = MatCreateHashTable_MPISBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
684a30f8f8cSSatish Balay     mat->ops->setvalues        = MatSetValues_MPISBAIJ_HT;
685a30f8f8cSSatish Balay     mat->ops->setvaluesblocked = MatSetValuesBlocked_MPISBAIJ_HT;
686a30f8f8cSSatish Balay   }
687a30f8f8cSSatish Balay 
688a30f8f8cSSatish Balay   if (baij->rowvalues) {
689a30f8f8cSSatish Balay     ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
690a30f8f8cSSatish Balay     baij->rowvalues = 0;
691a30f8f8cSSatish Balay   }
692a30f8f8cSSatish Balay   PetscFunctionReturn(0);
693a30f8f8cSSatish Balay }
694a30f8f8cSSatish Balay 
695a30f8f8cSSatish Balay #undef __FUNC__
696b0a32e0cSBarry Smith #define __FUNC__ "MatView_MPISBAIJ_ASCIIorDraworSocket"
697b0a32e0cSBarry Smith static int MatView_MPISBAIJ_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
698a30f8f8cSSatish Balay {
699a30f8f8cSSatish Balay   Mat_MPISBAIJ      *baij = (Mat_MPISBAIJ*)mat->data;
700fb9695e5SSatish Balay   int               ierr,bs = baij->bs,size = baij->size,rank = baij->rank;
701a30f8f8cSSatish Balay   PetscTruth        isascii,isdraw;
702b0a32e0cSBarry Smith   PetscViewer       sviewer;
703f3ef73ceSBarry Smith   PetscViewerFormat format;
704a30f8f8cSSatish Balay 
705a30f8f8cSSatish Balay   PetscFunctionBegin;
706b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
707fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
708a30f8f8cSSatish Balay   if (isascii) {
709b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
710fb9695e5SSatish Balay     if (format == PETSC_VIEWER_ASCII_INFO_LONG) {
711a30f8f8cSSatish Balay       MatInfo info;
712a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
713a30f8f8cSSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
714b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %d nz %d nz alloced %d bs %d mem %d\n",
715b5df2d14SHong Zhang               rank,mat->m,(int)info.nz_used*bs,(int)info.nz_allocated*bs,
716a30f8f8cSSatish Balay               baij->bs,(int)info.memory);CHKERRQ(ierr);
717a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
718b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
719a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
720b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
721b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
722a30f8f8cSSatish Balay       ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
723a30f8f8cSSatish Balay       PetscFunctionReturn(0);
724fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
725b0a32e0cSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  block size is %d\n",bs);CHKERRQ(ierr);
726a30f8f8cSSatish Balay       PetscFunctionReturn(0);
727a30f8f8cSSatish Balay     }
728a30f8f8cSSatish Balay   }
729a30f8f8cSSatish Balay 
730a30f8f8cSSatish Balay   if (isdraw) {
731b0a32e0cSBarry Smith     PetscDraw       draw;
732a30f8f8cSSatish Balay     PetscTruth isnull;
733b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
734b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
735a30f8f8cSSatish Balay   }
736a30f8f8cSSatish Balay 
737a30f8f8cSSatish Balay   if (size == 1) {
738a30f8f8cSSatish Balay     ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
739a30f8f8cSSatish Balay   } else {
740a30f8f8cSSatish Balay     /* assemble the entire matrix onto first processor. */
741a30f8f8cSSatish Balay     Mat         A;
74265d70643SHong Zhang     Mat_SeqSBAIJ *Aloc;
74365d70643SHong Zhang     Mat_SeqBAIJ *Bloc;
744b5df2d14SHong Zhang     int         M = mat->M,N = mat->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
745a30f8f8cSSatish Balay     MatScalar   *a;
746a30f8f8cSSatish Balay 
747a30f8f8cSSatish Balay     if (!rank) {
748bc0ba53dSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,M,N,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
749a30f8f8cSSatish Balay     } else {
750f65c83cfSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,0,0,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
751a30f8f8cSSatish Balay     }
752b0a32e0cSBarry Smith     PetscLogObjectParent(mat,A);
753a30f8f8cSSatish Balay 
754a30f8f8cSSatish Balay     /* copy over the A part */
75565d70643SHong Zhang     Aloc  = (Mat_SeqSBAIJ*)baij->A->data;
756a30f8f8cSSatish Balay     ai    = Aloc->i; aj = Aloc->j; a = Aloc->a;
75782502324SSatish Balay     ierr  = PetscMalloc(bs*sizeof(int),&rvals);CHKERRQ(ierr);
758a30f8f8cSSatish Balay 
759a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
760a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
761a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
762a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
763a30f8f8cSSatish Balay         col = (baij->cstart+aj[j])*bs;
764a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
765a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
766a30f8f8cSSatish Balay           col++; a += bs;
767a30f8f8cSSatish Balay         }
768a30f8f8cSSatish Balay       }
769a30f8f8cSSatish Balay     }
770a30f8f8cSSatish Balay     /* copy over the B part */
77165d70643SHong Zhang     Bloc = (Mat_SeqBAIJ*)baij->B->data;
77265d70643SHong Zhang     ai = Bloc->i; aj = Bloc->j; a = Bloc->a;
773a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
774a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
775a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
776a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
777a30f8f8cSSatish Balay         col = baij->garray[aj[j]]*bs;
778a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
779a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
780a30f8f8cSSatish Balay           col++; a += bs;
781a30f8f8cSSatish Balay         }
782a30f8f8cSSatish Balay       }
783a30f8f8cSSatish Balay     }
784a30f8f8cSSatish Balay     ierr = PetscFree(rvals);CHKERRQ(ierr);
785a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
786a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
787a30f8f8cSSatish Balay     /*
788a30f8f8cSSatish Balay        Everyone has to call to draw the matrix since the graphics waits are
789b0a32e0cSBarry Smith        synchronized across all processors that share the PetscDraw object
790a30f8f8cSSatish Balay     */
791b0a32e0cSBarry Smith     ierr = PetscViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
79265d70643SHong Zhang     if (!rank) {
793a30f8f8cSSatish Balay       ierr = MatView(((Mat_MPISBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
794a30f8f8cSSatish Balay     }
795b0a32e0cSBarry Smith     ierr = PetscViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
796a30f8f8cSSatish Balay     ierr = MatDestroy(A);CHKERRQ(ierr);
797a30f8f8cSSatish Balay   }
798a30f8f8cSSatish Balay   PetscFunctionReturn(0);
799a30f8f8cSSatish Balay }
800a30f8f8cSSatish Balay 
801a30f8f8cSSatish Balay #undef __FUNC__
802b0a32e0cSBarry Smith #define __FUNC__ "MatView_MPISBAIJ"
803b0a32e0cSBarry Smith int MatView_MPISBAIJ(Mat mat,PetscViewer viewer)
804a30f8f8cSSatish Balay {
805a30f8f8cSSatish Balay   int        ierr;
806a30f8f8cSSatish Balay   PetscTruth isascii,isdraw,issocket,isbinary;
807a30f8f8cSSatish Balay 
808a30f8f8cSSatish Balay   PetscFunctionBegin;
809b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
810fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
811b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_SOCKET,&issocket);CHKERRQ(ierr);
812fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_BINARY,&isbinary);CHKERRQ(ierr);
813a30f8f8cSSatish Balay   if (isascii || isdraw || issocket || isbinary) {
814a30f8f8cSSatish Balay     ierr = MatView_MPISBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
815a30f8f8cSSatish Balay   } else {
81629bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by MPISBAIJ matrices",((PetscObject)viewer)->type_name);
817a30f8f8cSSatish Balay   }
818a30f8f8cSSatish Balay   PetscFunctionReturn(0);
819a30f8f8cSSatish Balay }
820a30f8f8cSSatish Balay 
821a30f8f8cSSatish Balay #undef __FUNC__
822b0a32e0cSBarry Smith #define __FUNC__ "MatDestroy_MPISBAIJ"
823a30f8f8cSSatish Balay int MatDestroy_MPISBAIJ(Mat mat)
824a30f8f8cSSatish Balay {
825a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
826a30f8f8cSSatish Balay   int         ierr;
827a30f8f8cSSatish Balay 
828a30f8f8cSSatish Balay   PetscFunctionBegin;
829a30f8f8cSSatish Balay #if defined(PETSC_USE_LOG)
830b0a32e0cSBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%d,Cols=%d",mat->M,mat->N);
831a30f8f8cSSatish Balay #endif
832a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
833a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
834a30f8f8cSSatish Balay   ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
835a30f8f8cSSatish Balay   ierr = MatDestroy(baij->A);CHKERRQ(ierr);
836a30f8f8cSSatish Balay   ierr = MatDestroy(baij->B);CHKERRQ(ierr);
837a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
838a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
839a30f8f8cSSatish Balay #else
840a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
841a30f8f8cSSatish Balay #endif
842a30f8f8cSSatish Balay   if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
843a30f8f8cSSatish Balay   if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
844a30f8f8cSSatish Balay   if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
845a30f8f8cSSatish Balay   if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
846a30f8f8cSSatish Balay   if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
847a30f8f8cSSatish Balay   if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
848a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
849a30f8f8cSSatish Balay   if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
850a30f8f8cSSatish Balay #endif
851a30f8f8cSSatish Balay   ierr = PetscFree(baij);CHKERRQ(ierr);
852a30f8f8cSSatish Balay   PetscFunctionReturn(0);
853a30f8f8cSSatish Balay }
854a30f8f8cSSatish Balay 
855a30f8f8cSSatish Balay #undef __FUNC__
856b0a32e0cSBarry Smith #define __FUNC__ "MatMult_MPISBAIJ"
857a30f8f8cSSatish Balay int MatMult_MPISBAIJ(Mat A,Vec xx,Vec yy)
858a30f8f8cSSatish Balay {
859a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
860a30f8f8cSSatish Balay   int         ierr,nt;
861a30f8f8cSSatish Balay 
862a30f8f8cSSatish Balay   PetscFunctionBegin;
863a30f8f8cSSatish Balay   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
864b5df2d14SHong Zhang   if (nt != A->n) {
86529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
866a30f8f8cSSatish Balay   }
867a30f8f8cSSatish Balay   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
868b5df2d14SHong Zhang   if (nt != A->m) {
86929bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
870a30f8f8cSSatish Balay   }
87165d70643SHong Zhang 
872b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
873b941877fSHong Zhang   /* do diagonal part */
874b941877fSHong Zhang   ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
875b941877fSHong Zhang   /* do supperdiagonal part */
876b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
877b941877fSHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
878b941877fSHong Zhang   /* do subdiagonal part */
879b941877fSHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
880b941877fSHong Zhang   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
881b941877fSHong Zhang   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
88265d70643SHong Zhang 
883a30f8f8cSSatish Balay   PetscFunctionReturn(0);
884a30f8f8cSSatish Balay }
885a30f8f8cSSatish Balay 
886a30f8f8cSSatish Balay #undef __FUNC__
887b0a32e0cSBarry Smith #define __FUNC__ "MatMultAdd_MPISBAIJ"
888a30f8f8cSSatish Balay int MatMultAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
889a30f8f8cSSatish Balay {
890de8b6608SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
891aa482183SHong Zhang   int        ierr;
892a30f8f8cSSatish Balay 
893a30f8f8cSSatish Balay   PetscFunctionBegin;
894b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
895b941877fSHong Zhang   /* do diagonal part */
896b941877fSHong Zhang   ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
897b941877fSHong Zhang   /* do supperdiagonal part */
898b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
899de8b6608SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
900de8b6608SHong Zhang 
901b941877fSHong Zhang   /* do subdiagonal part */
902a30f8f8cSSatish Balay   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
903a30f8f8cSSatish Balay   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
904a30f8f8cSSatish Balay   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
905aa482183SHong Zhang 
906a30f8f8cSSatish Balay   PetscFunctionReturn(0);
907a30f8f8cSSatish Balay }
908a30f8f8cSSatish Balay 
909a30f8f8cSSatish Balay #undef __FUNC__
910b0a32e0cSBarry Smith #define __FUNC__ "MatMultTranspose_MPISBAIJ"
911a30f8f8cSSatish Balay int MatMultTranspose_MPISBAIJ(Mat A,Vec xx,Vec yy)
912a30f8f8cSSatish Balay {
913a30f8f8cSSatish Balay   PetscFunctionBegin;
91429bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMult().");
91596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
916a30f8f8cSSatish Balay }
917a30f8f8cSSatish Balay 
918a30f8f8cSSatish Balay #undef __FUNC__
919b0a32e0cSBarry Smith #define __FUNC__ "MatMultTransposeAdd_MPISBAIJ"
920a30f8f8cSSatish Balay int MatMultTransposeAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
921a30f8f8cSSatish Balay {
922a30f8f8cSSatish Balay   PetscFunctionBegin;
92329bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMultAdd().");
92496e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
925a30f8f8cSSatish Balay }
926a30f8f8cSSatish Balay 
927a30f8f8cSSatish Balay /*
928a30f8f8cSSatish Balay   This only works correctly for square matrices where the subblock A->A is the
929a30f8f8cSSatish Balay    diagonal block
930a30f8f8cSSatish Balay */
931a30f8f8cSSatish Balay #undef __FUNC__
932b0a32e0cSBarry Smith #define __FUNC__ "MatGetDiagonal_MPISBAIJ"
933a30f8f8cSSatish Balay int MatGetDiagonal_MPISBAIJ(Mat A,Vec v)
934a30f8f8cSSatish Balay {
935a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
936a30f8f8cSSatish Balay   int         ierr;
937a30f8f8cSSatish Balay 
938a30f8f8cSSatish Balay   PetscFunctionBegin;
93929bbc08cSBarry Smith   /* if (a->M != a->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block"); */
940a30f8f8cSSatish Balay   ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
941a30f8f8cSSatish Balay   PetscFunctionReturn(0);
942a30f8f8cSSatish Balay }
943a30f8f8cSSatish Balay 
944a30f8f8cSSatish Balay #undef __FUNC__
945b0a32e0cSBarry Smith #define __FUNC__ "MatScale_MPISBAIJ"
946a30f8f8cSSatish Balay int MatScale_MPISBAIJ(Scalar *aa,Mat A)
947a30f8f8cSSatish Balay {
948a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
949a30f8f8cSSatish Balay   int         ierr;
950a30f8f8cSSatish Balay 
951a30f8f8cSSatish Balay   PetscFunctionBegin;
952a30f8f8cSSatish Balay   ierr = MatScale(aa,a->A);CHKERRQ(ierr);
953a30f8f8cSSatish Balay   ierr = MatScale(aa,a->B);CHKERRQ(ierr);
954a30f8f8cSSatish Balay   PetscFunctionReturn(0);
955a30f8f8cSSatish Balay }
956a30f8f8cSSatish Balay 
957a30f8f8cSSatish Balay #undef __FUNC__
958b0a32e0cSBarry Smith #define __FUNC__ "MatGetOwnershipRange_MPISBAIJ"
959a30f8f8cSSatish Balay int MatGetOwnershipRange_MPISBAIJ(Mat matin,int *m,int *n)
960a30f8f8cSSatish Balay {
961a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
962a30f8f8cSSatish Balay 
963a30f8f8cSSatish Balay   PetscFunctionBegin;
964a30f8f8cSSatish Balay   if (m) *m = mat->rstart*mat->bs;
965a30f8f8cSSatish Balay   if (n) *n = mat->rend*mat->bs;
966a30f8f8cSSatish Balay   PetscFunctionReturn(0);
967a30f8f8cSSatish Balay }
968a30f8f8cSSatish Balay 
969a30f8f8cSSatish Balay #undef __FUNC__
970b0a32e0cSBarry Smith #define __FUNC__ "MatGetRow_MPISBAIJ"
971a30f8f8cSSatish Balay int MatGetRow_MPISBAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
972a30f8f8cSSatish Balay {
973a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
974a30f8f8cSSatish Balay   Scalar     *vworkA,*vworkB,**pvA,**pvB,*v_p;
975a30f8f8cSSatish Balay   int        bs = mat->bs,bs2 = mat->bs2,i,ierr,*cworkA,*cworkB,**pcA,**pcB;
976a30f8f8cSSatish Balay   int        nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
977a30f8f8cSSatish Balay   int        *cmap,*idx_p,cstart = mat->cstart;
978a30f8f8cSSatish Balay 
979a30f8f8cSSatish Balay   PetscFunctionBegin;
98029bbc08cSBarry Smith   if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
981a30f8f8cSSatish Balay   mat->getrowactive = PETSC_TRUE;
982a30f8f8cSSatish Balay 
983a30f8f8cSSatish Balay   if (!mat->rowvalues && (idx || v)) {
984a30f8f8cSSatish Balay     /*
985a30f8f8cSSatish Balay         allocate enough space to hold information from the longest row.
986a30f8f8cSSatish Balay     */
987a30f8f8cSSatish Balay     Mat_SeqSBAIJ *Aa = (Mat_SeqSBAIJ*)mat->A->data;
988a30f8f8cSSatish Balay     Mat_SeqBAIJ  *Ba = (Mat_SeqBAIJ*)mat->B->data;
989a30f8f8cSSatish Balay     int     max = 1,mbs = mat->mbs,tmp;
990a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
991a30f8f8cSSatish Balay       tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i]; /* row length */
992a30f8f8cSSatish Balay       if (max < tmp) { max = tmp; }
993a30f8f8cSSatish Balay     }
994b0a32e0cSBarry Smith     ierr = PetscMalloc(max*bs2*(sizeof(int)+sizeof(Scalar)),&mat->rowvalues);CHKERRQ(ierr);
995a30f8f8cSSatish Balay     mat->rowindices = (int*)(mat->rowvalues + max*bs2);
996a30f8f8cSSatish Balay   }
997a30f8f8cSSatish Balay 
99829bbc08cSBarry Smith   if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
999a30f8f8cSSatish Balay   lrow = row - brstart;  /* local row index */
1000a30f8f8cSSatish Balay 
1001a30f8f8cSSatish Balay   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1002a30f8f8cSSatish Balay   if (!v)   {pvA = 0; pvB = 0;}
1003a30f8f8cSSatish Balay   if (!idx) {pcA = 0; if (!v) pcB = 0;}
1004a30f8f8cSSatish Balay   ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1005a30f8f8cSSatish Balay   ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1006a30f8f8cSSatish Balay   nztot = nzA + nzB;
1007a30f8f8cSSatish Balay 
1008a30f8f8cSSatish Balay   cmap  = mat->garray;
1009a30f8f8cSSatish Balay   if (v  || idx) {
1010a30f8f8cSSatish Balay     if (nztot) {
1011a30f8f8cSSatish Balay       /* Sort by increasing column numbers, assuming A and B already sorted */
1012a30f8f8cSSatish Balay       int imark = -1;
1013a30f8f8cSSatish Balay       if (v) {
1014a30f8f8cSSatish Balay         *v = v_p = mat->rowvalues;
1015a30f8f8cSSatish Balay         for (i=0; i<nzB; i++) {
1016a30f8f8cSSatish Balay           if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
1017a30f8f8cSSatish Balay           else break;
1018a30f8f8cSSatish Balay         }
1019a30f8f8cSSatish Balay         imark = i;
1020a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
1021a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
1022a30f8f8cSSatish Balay       }
1023a30f8f8cSSatish Balay       if (idx) {
1024a30f8f8cSSatish Balay         *idx = idx_p = mat->rowindices;
1025a30f8f8cSSatish Balay         if (imark > -1) {
1026a30f8f8cSSatish Balay           for (i=0; i<imark; i++) {
1027a30f8f8cSSatish Balay             idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
1028a30f8f8cSSatish Balay           }
1029a30f8f8cSSatish Balay         } else {
1030a30f8f8cSSatish Balay           for (i=0; i<nzB; i++) {
1031a30f8f8cSSatish Balay             if (cmap[cworkB[i]/bs] < cstart)
1032a30f8f8cSSatish Balay               idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1033a30f8f8cSSatish Balay             else break;
1034a30f8f8cSSatish Balay           }
1035a30f8f8cSSatish Balay           imark = i;
1036a30f8f8cSSatish Balay         }
1037a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
1038a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1039a30f8f8cSSatish Balay       }
1040a30f8f8cSSatish Balay     } else {
1041a30f8f8cSSatish Balay       if (idx) *idx = 0;
1042a30f8f8cSSatish Balay       if (v)   *v   = 0;
1043a30f8f8cSSatish Balay     }
1044a30f8f8cSSatish Balay   }
1045a30f8f8cSSatish Balay   *nz = nztot;
1046a30f8f8cSSatish Balay   ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1047a30f8f8cSSatish Balay   ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1048a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1049a30f8f8cSSatish Balay }
1050a30f8f8cSSatish Balay 
1051a30f8f8cSSatish Balay #undef __FUNC__
1052b0a32e0cSBarry Smith #define __FUNC__ "MatRestoreRow_MPISBAIJ"
1053a30f8f8cSSatish Balay int MatRestoreRow_MPISBAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
1054a30f8f8cSSatish Balay {
1055a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1056a30f8f8cSSatish Balay 
1057a30f8f8cSSatish Balay   PetscFunctionBegin;
1058a30f8f8cSSatish Balay   if (baij->getrowactive == PETSC_FALSE) {
105929bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
1060a30f8f8cSSatish Balay   }
1061a30f8f8cSSatish Balay   baij->getrowactive = PETSC_FALSE;
1062a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1063a30f8f8cSSatish Balay }
1064a30f8f8cSSatish Balay 
1065a30f8f8cSSatish Balay #undef __FUNC__
1066b0a32e0cSBarry Smith #define __FUNC__ "MatGetBlockSize_MPISBAIJ"
1067a30f8f8cSSatish Balay int MatGetBlockSize_MPISBAIJ(Mat mat,int *bs)
1068a30f8f8cSSatish Balay {
1069a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1070a30f8f8cSSatish Balay 
1071a30f8f8cSSatish Balay   PetscFunctionBegin;
1072a30f8f8cSSatish Balay   *bs = baij->bs;
1073a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1074a30f8f8cSSatish Balay }
1075a30f8f8cSSatish Balay 
1076a30f8f8cSSatish Balay #undef __FUNC__
1077b0a32e0cSBarry Smith #define __FUNC__ "MatZeroEntries_MPISBAIJ"
1078a30f8f8cSSatish Balay int MatZeroEntries_MPISBAIJ(Mat A)
1079a30f8f8cSSatish Balay {
1080a30f8f8cSSatish Balay   Mat_MPISBAIJ *l = (Mat_MPISBAIJ*)A->data;
1081a30f8f8cSSatish Balay   int         ierr;
1082a30f8f8cSSatish Balay 
1083a30f8f8cSSatish Balay   PetscFunctionBegin;
1084a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
1085a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
1086a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1087a30f8f8cSSatish Balay }
1088a30f8f8cSSatish Balay 
1089a30f8f8cSSatish Balay #undef __FUNC__
1090b0a32e0cSBarry Smith #define __FUNC__ "MatGetInfo_MPISBAIJ"
1091a30f8f8cSSatish Balay int MatGetInfo_MPISBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
1092a30f8f8cSSatish Balay {
1093a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)matin->data;
1094a30f8f8cSSatish Balay   Mat         A = a->A,B = a->B;
1095a30f8f8cSSatish Balay   int         ierr;
1096a30f8f8cSSatish Balay   PetscReal   isend[5],irecv[5];
1097a30f8f8cSSatish Balay 
1098a30f8f8cSSatish Balay   PetscFunctionBegin;
1099a30f8f8cSSatish Balay   info->block_size     = (double)a->bs;
1100a30f8f8cSSatish Balay   ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
1101a30f8f8cSSatish Balay   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
1102a30f8f8cSSatish Balay   isend[3] = info->memory;  isend[4] = info->mallocs;
1103a30f8f8cSSatish Balay   ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
1104a30f8f8cSSatish Balay   isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
1105a30f8f8cSSatish Balay   isend[3] += info->memory;  isend[4] += info->mallocs;
1106a30f8f8cSSatish Balay   if (flag == MAT_LOCAL) {
1107a30f8f8cSSatish Balay     info->nz_used      = isend[0];
1108a30f8f8cSSatish Balay     info->nz_allocated = isend[1];
1109a30f8f8cSSatish Balay     info->nz_unneeded  = isend[2];
1110a30f8f8cSSatish Balay     info->memory       = isend[3];
1111a30f8f8cSSatish Balay     info->mallocs      = isend[4];
1112a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_MAX) {
1113a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_MAX,matin->comm);CHKERRQ(ierr);
1114a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1115a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1116a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1117a30f8f8cSSatish Balay     info->memory       = irecv[3];
1118a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1119a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_SUM) {
1120a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_SUM,matin->comm);CHKERRQ(ierr);
1121a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1122a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1123a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1124a30f8f8cSSatish Balay     info->memory       = irecv[3];
1125a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1126a30f8f8cSSatish Balay   } else {
112729bbc08cSBarry Smith     SETERRQ1(1,"Unknown MatInfoType argument %d",flag);
1128a30f8f8cSSatish Balay   }
1129b5df2d14SHong Zhang   info->rows_global       = (double)A->M;
1130b5df2d14SHong Zhang   info->columns_global    = (double)A->N;
1131b5df2d14SHong Zhang   info->rows_local        = (double)A->m;
1132b5df2d14SHong Zhang   info->columns_local     = (double)A->N;
1133a30f8f8cSSatish Balay   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
1134a30f8f8cSSatish Balay   info->fill_ratio_needed = 0;
1135a30f8f8cSSatish Balay   info->factor_mallocs    = 0;
1136a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1137a30f8f8cSSatish Balay }
1138a30f8f8cSSatish Balay 
1139a30f8f8cSSatish Balay #undef __FUNC__
1140b0a32e0cSBarry Smith #define __FUNC__ "MatSetOption_MPISBAIJ"
1141a30f8f8cSSatish Balay int MatSetOption_MPISBAIJ(Mat A,MatOption op)
1142a30f8f8cSSatish Balay {
1143a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1144a30f8f8cSSatish Balay   int         ierr;
1145a30f8f8cSSatish Balay 
1146a30f8f8cSSatish Balay   PetscFunctionBegin;
1147a30f8f8cSSatish Balay   if (op == MAT_NO_NEW_NONZERO_LOCATIONS ||
1148a30f8f8cSSatish Balay       op == MAT_YES_NEW_NONZERO_LOCATIONS ||
1149a30f8f8cSSatish Balay       op == MAT_COLUMNS_UNSORTED ||
1150a30f8f8cSSatish Balay       op == MAT_COLUMNS_SORTED ||
1151a30f8f8cSSatish Balay       op == MAT_NEW_NONZERO_ALLOCATION_ERR ||
1152a30f8f8cSSatish Balay       op == MAT_KEEP_ZEROED_ROWS ||
1153a30f8f8cSSatish Balay       op == MAT_NEW_NONZERO_LOCATION_ERR) {
1154a30f8f8cSSatish Balay         ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1155a30f8f8cSSatish Balay         ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1156a30f8f8cSSatish Balay   } else if (op == MAT_ROW_ORIENTED) {
1157a30f8f8cSSatish Balay         a->roworiented = PETSC_TRUE;
1158a30f8f8cSSatish Balay         ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1159a30f8f8cSSatish Balay         ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1160a30f8f8cSSatish Balay   } else if (op == MAT_ROWS_SORTED ||
1161a30f8f8cSSatish Balay              op == MAT_ROWS_UNSORTED ||
1162a30f8f8cSSatish Balay              op == MAT_SYMMETRIC ||
1163a30f8f8cSSatish Balay              op == MAT_STRUCTURALLY_SYMMETRIC ||
1164a30f8f8cSSatish Balay              op == MAT_YES_NEW_DIAGONALS ||
1165a30f8f8cSSatish Balay              op == MAT_USE_HASH_TABLE) {
1166b0a32e0cSBarry Smith     PetscLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
1167a30f8f8cSSatish Balay   } else if (op == MAT_COLUMN_ORIENTED) {
1168a30f8f8cSSatish Balay     a->roworiented = PETSC_FALSE;
1169a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1170a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1171a30f8f8cSSatish Balay   } else if (op == MAT_IGNORE_OFF_PROC_ENTRIES) {
1172a30f8f8cSSatish Balay     a->donotstash = PETSC_TRUE;
1173a30f8f8cSSatish Balay   } else if (op == MAT_NO_NEW_DIAGONALS) {
117429bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
1175a30f8f8cSSatish Balay   } else if (op == MAT_USE_HASH_TABLE) {
1176a30f8f8cSSatish Balay     a->ht_flag = PETSC_TRUE;
1177a30f8f8cSSatish Balay   } else {
117829bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"unknown option");
1179a30f8f8cSSatish Balay   }
1180a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1181a30f8f8cSSatish Balay }
1182a30f8f8cSSatish Balay 
1183a30f8f8cSSatish Balay #undef __FUNC__
1184b0a32e0cSBarry Smith #define __FUNC__ "MatTranspose_MPISBAIJ("
1185a30f8f8cSSatish Balay int MatTranspose_MPISBAIJ(Mat A,Mat *matout)
1186a30f8f8cSSatish Balay {
1187a30f8f8cSSatish Balay   PetscFunctionBegin;
118829bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. MatTranspose() should not be called");
118996e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
1190a30f8f8cSSatish Balay }
1191a30f8f8cSSatish Balay 
1192a30f8f8cSSatish Balay #undef __FUNC__
1193b0a32e0cSBarry Smith #define __FUNC__ "MatDiagonalScale_MPISBAIJ"
1194a30f8f8cSSatish Balay int MatDiagonalScale_MPISBAIJ(Mat mat,Vec ll,Vec rr)
1195a30f8f8cSSatish Balay {
1196a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1197a30f8f8cSSatish Balay   Mat         a = baij->A,b = baij->B;
1198a30f8f8cSSatish Balay   int         ierr,s1,s2,s3;
1199a30f8f8cSSatish Balay 
1200a30f8f8cSSatish Balay   PetscFunctionBegin;
1201a30f8f8cSSatish Balay   if (ll != rr) {
120229bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n");
1203a30f8f8cSSatish Balay   }
1204a30f8f8cSSatish Balay   ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
1205a30f8f8cSSatish Balay   if (rr) {
1206a30f8f8cSSatish Balay     ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
120729bbc08cSBarry Smith     if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
1208a30f8f8cSSatish Balay     /* Overlap communication with computation. */
1209a30f8f8cSSatish Balay     ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1210a30f8f8cSSatish Balay     /*} if (ll) { */
1211a30f8f8cSSatish Balay     ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
121229bbc08cSBarry Smith     if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
1213a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
1214a30f8f8cSSatish Balay     /* } */
1215a30f8f8cSSatish Balay   /* scale  the diagonal block */
1216a30f8f8cSSatish Balay   ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);
1217a30f8f8cSSatish Balay 
1218a30f8f8cSSatish Balay   /* if (rr) { */
1219a30f8f8cSSatish Balay     /* Do a scatter end and then right scale the off-diagonal block */
1220a30f8f8cSSatish Balay     ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1221a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
1222a30f8f8cSSatish Balay   }
1223a30f8f8cSSatish Balay 
1224a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1225a30f8f8cSSatish Balay }
1226a30f8f8cSSatish Balay 
1227a30f8f8cSSatish Balay #undef __FUNC__
1228b0a32e0cSBarry Smith #define __FUNC__ "MatZeroRows_MPISBAIJ"
1229a30f8f8cSSatish Balay int MatZeroRows_MPISBAIJ(Mat A,IS is,Scalar *diag)
1230a30f8f8cSSatish Balay {
1231a30f8f8cSSatish Balay   Mat_MPISBAIJ   *l = (Mat_MPISBAIJ*)A->data;
1232a30f8f8cSSatish Balay   int            i,ierr,N,*rows,*owners = l->rowners,size = l->size;
123335d8aa7fSBarry Smith   int            *procs,*nprocs,j,idx,nsends,*work,row;
1234a30f8f8cSSatish Balay   int            nmax,*svalues,*starts,*owner,nrecvs,rank = l->rank;
1235a30f8f8cSSatish Balay   int            *rvalues,tag = A->tag,count,base,slen,n,*source;
1236a30f8f8cSSatish Balay   int            *lens,imdex,*lrows,*values,bs=l->bs,rstart_bs=l->rstart_bs;
1237a30f8f8cSSatish Balay   MPI_Comm       comm = A->comm;
1238a30f8f8cSSatish Balay   MPI_Request    *send_waits,*recv_waits;
1239a30f8f8cSSatish Balay   MPI_Status     recv_status,*send_status;
1240a30f8f8cSSatish Balay   IS             istmp;
124135d8aa7fSBarry Smith   PetscTruth     found;
1242a30f8f8cSSatish Balay 
1243a30f8f8cSSatish Balay   PetscFunctionBegin;
1244a30f8f8cSSatish Balay   ierr = ISGetSize(is,&N);CHKERRQ(ierr);
1245a30f8f8cSSatish Balay   ierr = ISGetIndices(is,&rows);CHKERRQ(ierr);
1246a30f8f8cSSatish Balay 
1247a30f8f8cSSatish Balay   /*  first count number of contributors to each processor */
124882502324SSatish Balay   ierr  = PetscMalloc(2*size*sizeof(int),&nprocs);CHKERRQ(ierr);
1249a30f8f8cSSatish Balay   ierr  = PetscMemzero(nprocs,2*size*sizeof(int));CHKERRQ(ierr);
1250a30f8f8cSSatish Balay   procs = nprocs + size;
1251b0a32e0cSBarry Smith   ierr  = PetscMalloc((N+1)*sizeof(int),&owner);CHKERRQ(ierr); /* see note*/
1252a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1253a30f8f8cSSatish Balay     idx   = rows[i];
125435d8aa7fSBarry Smith     found = PETSC_FALSE;
1255a30f8f8cSSatish Balay     for (j=0; j<size; j++) {
1256a30f8f8cSSatish Balay       if (idx >= owners[j]*bs && idx < owners[j+1]*bs) {
125735d8aa7fSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = PETSC_TRUE; break;
1258a30f8f8cSSatish Balay       }
1259a30f8f8cSSatish Balay     }
126029bbc08cSBarry Smith     if (!found) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
1261a30f8f8cSSatish Balay   }
1262a30f8f8cSSatish Balay   nsends = 0;  for (i=0; i<size; i++) { nsends += procs[i];}
1263a30f8f8cSSatish Balay 
1264a30f8f8cSSatish Balay   /* inform other processors of number of messages and max length*/
126582502324SSatish Balay   ierr   = PetscMalloc(2*size*sizeof(int),&work);CHKERRQ(ierr);
1266a30f8f8cSSatish Balay   ierr   = MPI_Allreduce(nprocs,work,2*size,MPI_INT,PetscMaxSum_Op,comm);CHKERRQ(ierr);
1267a30f8f8cSSatish Balay   nmax   = work[rank];
1268a30f8f8cSSatish Balay   nrecvs = work[size+rank];
1269a30f8f8cSSatish Balay   ierr   = PetscFree(work);CHKERRQ(ierr);
1270a30f8f8cSSatish Balay 
1271a30f8f8cSSatish Balay   /* post receives:   */
1272b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*(nmax+1)*sizeof(int),&rvalues);CHKERRQ(ierr);
1273b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
1274a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1275a30f8f8cSSatish Balay     ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPI_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
1276a30f8f8cSSatish Balay   }
1277a30f8f8cSSatish Balay 
1278a30f8f8cSSatish Balay   /* do sends:
1279a30f8f8cSSatish Balay      1) starts[i] gives the starting index in svalues for stuff going to
1280a30f8f8cSSatish Balay      the ith processor
1281a30f8f8cSSatish Balay   */
1282b0a32e0cSBarry Smith   ierr = PetscMalloc((N+1)*sizeof(int),&svalues);CHKERRQ(ierr);
1283b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
1284b0a32e0cSBarry Smith   ierr = PetscMalloc((size+1)*sizeof(int),&starts);CHKERRQ(ierr);
1285a30f8f8cSSatish Balay   starts[0]  = 0;
1286a30f8f8cSSatish Balay   for (i=1; i<size; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1287a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1288a30f8f8cSSatish Balay     svalues[starts[owner[i]]++] = rows[i];
1289a30f8f8cSSatish Balay   }
1290a30f8f8cSSatish Balay   ierr = ISRestoreIndices(is,&rows);CHKERRQ(ierr);
1291a30f8f8cSSatish Balay 
1292a30f8f8cSSatish Balay   starts[0] = 0;
1293a30f8f8cSSatish Balay   for (i=1; i<size+1; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1294a30f8f8cSSatish Balay   count = 0;
1295a30f8f8cSSatish Balay   for (i=0; i<size; i++) {
1296a30f8f8cSSatish Balay     if (procs[i]) {
1297a30f8f8cSSatish Balay       ierr = MPI_Isend(svalues+starts[i],nprocs[i],MPI_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
1298a30f8f8cSSatish Balay     }
1299a30f8f8cSSatish Balay   }
1300a30f8f8cSSatish Balay   ierr = PetscFree(starts);CHKERRQ(ierr);
1301a30f8f8cSSatish Balay 
1302a30f8f8cSSatish Balay   base = owners[rank]*bs;
1303a30f8f8cSSatish Balay 
1304a30f8f8cSSatish Balay   /*  wait on receives */
1305b0a32e0cSBarry Smith   ierr   = PetscMalloc(2*(nrecvs+1)*sizeof(int),&lens);CHKERRQ(ierr);
1306a30f8f8cSSatish Balay   source = lens + nrecvs;
1307a30f8f8cSSatish Balay   count  = nrecvs; slen = 0;
1308a30f8f8cSSatish Balay   while (count) {
1309a30f8f8cSSatish Balay     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
1310a30f8f8cSSatish Balay     /* unpack receives into our local space */
1311a30f8f8cSSatish Balay     ierr = MPI_Get_count(&recv_status,MPI_INT,&n);CHKERRQ(ierr);
1312a30f8f8cSSatish Balay     source[imdex]  = recv_status.MPI_SOURCE;
1313a30f8f8cSSatish Balay     lens[imdex]    = n;
1314a30f8f8cSSatish Balay     slen          += n;
1315a30f8f8cSSatish Balay     count--;
1316a30f8f8cSSatish Balay   }
1317a30f8f8cSSatish Balay   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
1318a30f8f8cSSatish Balay 
1319a30f8f8cSSatish Balay   /* move the data into the send scatter */
1320b0a32e0cSBarry Smith   ierr = PetscMalloc((slen+1)*sizeof(int),&lrows);CHKERRQ(ierr);
1321a30f8f8cSSatish Balay   count = 0;
1322a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1323a30f8f8cSSatish Balay     values = rvalues + i*nmax;
1324a30f8f8cSSatish Balay     for (j=0; j<lens[i]; j++) {
1325a30f8f8cSSatish Balay       lrows[count++] = values[j] - base;
1326a30f8f8cSSatish Balay     }
1327a30f8f8cSSatish Balay   }
1328a30f8f8cSSatish Balay   ierr = PetscFree(rvalues);CHKERRQ(ierr);
1329a30f8f8cSSatish Balay   ierr = PetscFree(lens);CHKERRQ(ierr);
1330a30f8f8cSSatish Balay   ierr = PetscFree(owner);CHKERRQ(ierr);
1331a30f8f8cSSatish Balay   ierr = PetscFree(nprocs);CHKERRQ(ierr);
1332a30f8f8cSSatish Balay 
1333a30f8f8cSSatish Balay   /* actually zap the local rows */
1334a30f8f8cSSatish Balay   ierr = ISCreateGeneral(PETSC_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
1335b0a32e0cSBarry Smith   PetscLogObjectParent(A,istmp);
1336a30f8f8cSSatish Balay 
1337a30f8f8cSSatish Balay   /*
1338a30f8f8cSSatish Balay         Zero the required rows. If the "diagonal block" of the matrix
1339a30f8f8cSSatish Balay      is square and the user wishes to set the diagonal we use seperate
1340a30f8f8cSSatish Balay      code so that MatSetValues() is not called for each diagonal allocating
1341a30f8f8cSSatish Balay      new memory, thus calling lots of mallocs and slowing things down.
1342a30f8f8cSSatish Balay 
1343a30f8f8cSSatish Balay        Contributed by: Mathew Knepley
1344a30f8f8cSSatish Balay   */
1345a30f8f8cSSatish Balay   /* must zero l->B before l->A because the (diag) case below may put values into l->B*/
1346ff64ff16SBarry Smith   ierr = MatZeroRows_SeqBAIJ(l->B,istmp,0);CHKERRQ(ierr);
1347a30f8f8cSSatish Balay   if (diag && (l->A->M == l->A->N)) {
1348a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,diag);CHKERRQ(ierr);
1349a30f8f8cSSatish Balay   } else if (diag) {
1350a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1351a30f8f8cSSatish Balay     if (((Mat_SeqSBAIJ*)l->A->data)->nonew) {
135229bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\
1353a30f8f8cSSatish Balay MAT_NO_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR");
1354a30f8f8cSSatish Balay     }
1355a30f8f8cSSatish Balay     for (i=0; i<slen; i++) {
1356a30f8f8cSSatish Balay       row  = lrows[i] + rstart_bs;
1357a30f8f8cSSatish Balay       ierr = MatSetValues(A,1,&row,1,&row,diag,INSERT_VALUES);CHKERRQ(ierr);
1358a30f8f8cSSatish Balay     }
1359a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1360a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1361a30f8f8cSSatish Balay   } else {
1362a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1363a30f8f8cSSatish Balay   }
1364a30f8f8cSSatish Balay 
1365a30f8f8cSSatish Balay   ierr = ISDestroy(istmp);CHKERRQ(ierr);
1366a30f8f8cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
1367a30f8f8cSSatish Balay 
1368a30f8f8cSSatish Balay   /* wait on sends */
1369a30f8f8cSSatish Balay   if (nsends) {
137082502324SSatish Balay     ierr = PetscMalloc(nsends*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
1371a30f8f8cSSatish Balay     ierr        = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
1372a30f8f8cSSatish Balay     ierr        = PetscFree(send_status);CHKERRQ(ierr);
1373a30f8f8cSSatish Balay   }
1374a30f8f8cSSatish Balay   ierr = PetscFree(send_waits);CHKERRQ(ierr);
1375a30f8f8cSSatish Balay   ierr = PetscFree(svalues);CHKERRQ(ierr);
1376a30f8f8cSSatish Balay 
1377a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1378a30f8f8cSSatish Balay }
1379a30f8f8cSSatish Balay 
1380a30f8f8cSSatish Balay #undef __FUNC__
1381b0a32e0cSBarry Smith #define __FUNC__ "MatPrintHelp_MPISBAIJ"
1382a30f8f8cSSatish Balay int MatPrintHelp_MPISBAIJ(Mat A)
1383a30f8f8cSSatish Balay {
1384a30f8f8cSSatish Balay   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1385a30f8f8cSSatish Balay   MPI_Comm    comm = A->comm;
1386a30f8f8cSSatish Balay   static int  called = 0;
1387a30f8f8cSSatish Balay   int         ierr;
1388a30f8f8cSSatish Balay 
1389a30f8f8cSSatish Balay   PetscFunctionBegin;
1390a30f8f8cSSatish Balay   if (!a->rank) {
1391a30f8f8cSSatish Balay     ierr = MatPrintHelp_SeqSBAIJ(a->A);CHKERRQ(ierr);
1392a30f8f8cSSatish Balay   }
1393a30f8f8cSSatish Balay   if (called) {PetscFunctionReturn(0);} else called = 1;
1394a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm," Options for MATMPISBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
1395a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
1396a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1397a30f8f8cSSatish Balay }
1398a30f8f8cSSatish Balay 
1399a30f8f8cSSatish Balay #undef __FUNC__
1400b0a32e0cSBarry Smith #define __FUNC__ "MatSetUnfactored_MPISBAIJ"
1401a30f8f8cSSatish Balay int MatSetUnfactored_MPISBAIJ(Mat A)
1402a30f8f8cSSatish Balay {
1403f3566a2aSHong Zhang   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1404a30f8f8cSSatish Balay   int         ierr;
1405a30f8f8cSSatish Balay 
1406a30f8f8cSSatish Balay   PetscFunctionBegin;
1407a30f8f8cSSatish Balay   ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
1408a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1409a30f8f8cSSatish Balay }
1410a30f8f8cSSatish Balay 
1411a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat,MatDuplicateOption,Mat *);
1412a30f8f8cSSatish Balay 
1413a30f8f8cSSatish Balay #undef __FUNC__
1414b0a32e0cSBarry Smith #define __FUNC__ "MatEqual_MPISBAIJ"
1415a30f8f8cSSatish Balay int MatEqual_MPISBAIJ(Mat A,Mat B,PetscTruth *flag)
1416a30f8f8cSSatish Balay {
1417a30f8f8cSSatish Balay   Mat_MPISBAIJ *matB = (Mat_MPISBAIJ*)B->data,*matA = (Mat_MPISBAIJ*)A->data;
1418a30f8f8cSSatish Balay   Mat         a,b,c,d;
1419a30f8f8cSSatish Balay   PetscTruth  flg;
1420a30f8f8cSSatish Balay   int         ierr;
1421a30f8f8cSSatish Balay 
1422a30f8f8cSSatish Balay   PetscFunctionBegin;
1423b5df2d14SHong Zhang   ierr = PetscTypeCompare((PetscObject)B,MATMPISBAIJ,&flg);CHKERRQ(ierr);
1424b5df2d14SHong Zhang   if (!flg) SETERRQ(PETSC_ERR_ARG_INCOMP,"Matrices must be same type");
1425a30f8f8cSSatish Balay   a = matA->A; b = matA->B;
1426a30f8f8cSSatish Balay   c = matB->A; d = matB->B;
1427a30f8f8cSSatish Balay 
1428a30f8f8cSSatish Balay   ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
1429a30f8f8cSSatish Balay   if (flg == PETSC_TRUE) {
1430a30f8f8cSSatish Balay     ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
1431a30f8f8cSSatish Balay   }
1432a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
1433a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1434a30f8f8cSSatish Balay }
1435a30f8f8cSSatish Balay 
1436273d9f13SBarry Smith #undef __FUNC__
1437b0a32e0cSBarry Smith #define __FUNC__ "MatSetUpPreallocation_MPISBAIJ"
1438273d9f13SBarry Smith int MatSetUpPreallocation_MPISBAIJ(Mat A)
1439273d9f13SBarry Smith {
1440273d9f13SBarry Smith   int        ierr;
1441273d9f13SBarry Smith 
1442273d9f13SBarry Smith   PetscFunctionBegin;
1443273d9f13SBarry Smith   ierr = MatMPISBAIJSetPreallocation(A,1,PETSC_DEFAULT,0,PETSC_DEFAULT,0);CHKERRQ(ierr);
1444273d9f13SBarry Smith   PetscFunctionReturn(0);
1445273d9f13SBarry Smith }
1446a30f8f8cSSatish Balay /* -------------------------------------------------------------------*/
1447a30f8f8cSSatish Balay static struct _MatOps MatOps_Values = {
1448a30f8f8cSSatish Balay   MatSetValues_MPISBAIJ,
1449a30f8f8cSSatish Balay   MatGetRow_MPISBAIJ,
1450a30f8f8cSSatish Balay   MatRestoreRow_MPISBAIJ,
1451a30f8f8cSSatish Balay   MatMult_MPISBAIJ,
1452a30f8f8cSSatish Balay   MatMultAdd_MPISBAIJ,
1453a30f8f8cSSatish Balay   MatMultTranspose_MPISBAIJ,
1454a30f8f8cSSatish Balay   MatMultTransposeAdd_MPISBAIJ,
1455a30f8f8cSSatish Balay   0,
1456a30f8f8cSSatish Balay   0,
1457a30f8f8cSSatish Balay   0,
1458a30f8f8cSSatish Balay   0,
1459a30f8f8cSSatish Balay   0,
1460a30f8f8cSSatish Balay   0,
1461a30f8f8cSSatish Balay   0,
1462a30f8f8cSSatish Balay   MatTranspose_MPISBAIJ,
1463a30f8f8cSSatish Balay   MatGetInfo_MPISBAIJ,
1464a30f8f8cSSatish Balay   MatEqual_MPISBAIJ,
1465a30f8f8cSSatish Balay   MatGetDiagonal_MPISBAIJ,
1466a30f8f8cSSatish Balay   MatDiagonalScale_MPISBAIJ,
1467a30f8f8cSSatish Balay   MatNorm_MPISBAIJ,
1468a30f8f8cSSatish Balay   MatAssemblyBegin_MPISBAIJ,
1469a30f8f8cSSatish Balay   MatAssemblyEnd_MPISBAIJ,
1470a30f8f8cSSatish Balay   0,
1471a30f8f8cSSatish Balay   MatSetOption_MPISBAIJ,
1472a30f8f8cSSatish Balay   MatZeroEntries_MPISBAIJ,
1473a30f8f8cSSatish Balay   MatZeroRows_MPISBAIJ,
1474a30f8f8cSSatish Balay   0,
1475a30f8f8cSSatish Balay   0,
1476a30f8f8cSSatish Balay   0,
1477a30f8f8cSSatish Balay   0,
1478273d9f13SBarry Smith   MatSetUpPreallocation_MPISBAIJ,
1479b5df2d14SHong Zhang   0,
1480a30f8f8cSSatish Balay   MatGetOwnershipRange_MPISBAIJ,
1481a30f8f8cSSatish Balay   0,
1482a30f8f8cSSatish Balay   0,
1483a30f8f8cSSatish Balay   0,
1484a30f8f8cSSatish Balay   0,
1485a30f8f8cSSatish Balay   MatDuplicate_MPISBAIJ,
1486a30f8f8cSSatish Balay   0,
1487a30f8f8cSSatish Balay   0,
1488a30f8f8cSSatish Balay   0,
1489a30f8f8cSSatish Balay   0,
1490a30f8f8cSSatish Balay   0,
1491a30f8f8cSSatish Balay   MatGetSubMatrices_MPISBAIJ,
1492a30f8f8cSSatish Balay   MatIncreaseOverlap_MPISBAIJ,
1493a30f8f8cSSatish Balay   MatGetValues_MPISBAIJ,
1494a30f8f8cSSatish Balay   0,
1495a30f8f8cSSatish Balay   MatPrintHelp_MPISBAIJ,
1496a30f8f8cSSatish Balay   MatScale_MPISBAIJ,
1497a30f8f8cSSatish Balay   0,
1498a30f8f8cSSatish Balay   0,
1499a30f8f8cSSatish Balay   0,
1500a30f8f8cSSatish Balay   MatGetBlockSize_MPISBAIJ,
1501a30f8f8cSSatish Balay   0,
1502a30f8f8cSSatish Balay   0,
1503a30f8f8cSSatish Balay   0,
1504a30f8f8cSSatish Balay   0,
1505a30f8f8cSSatish Balay   0,
1506a30f8f8cSSatish Balay   0,
1507a30f8f8cSSatish Balay   MatSetUnfactored_MPISBAIJ,
1508a30f8f8cSSatish Balay   0,
1509a30f8f8cSSatish Balay   MatSetValuesBlocked_MPISBAIJ,
1510a30f8f8cSSatish Balay   0,
1511a30f8f8cSSatish Balay   0,
1512a30f8f8cSSatish Balay   0,
151324d5174aSHong Zhang   MatGetMaps_Petsc,
151424d5174aSHong Zhang   0,
151524d5174aSHong Zhang   0,
151624d5174aSHong Zhang   0,
151724d5174aSHong Zhang   0,
151824d5174aSHong Zhang   0,
151924d5174aSHong Zhang   0,
152024d5174aSHong Zhang   MatGetRowMax_MPISBAIJ};
1521a30f8f8cSSatish Balay 
1522a30f8f8cSSatish Balay 
1523a30f8f8cSSatish Balay EXTERN_C_BEGIN
1524a30f8f8cSSatish Balay #undef __FUNC__
1525b0a32e0cSBarry Smith #define __FUNC__ "MatGetDiagonalBlock_MPISBAIJ"
1526a30f8f8cSSatish Balay int MatGetDiagonalBlock_MPISBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
1527a30f8f8cSSatish Balay {
1528a30f8f8cSSatish Balay   PetscFunctionBegin;
1529a30f8f8cSSatish Balay   *a      = ((Mat_MPISBAIJ *)A->data)->A;
1530a30f8f8cSSatish Balay   *iscopy = PETSC_FALSE;
1531a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1532a30f8f8cSSatish Balay }
1533a30f8f8cSSatish Balay EXTERN_C_END
1534a30f8f8cSSatish Balay 
1535273d9f13SBarry Smith EXTERN_C_BEGIN
1536a30f8f8cSSatish Balay #undef __FUNC__
1537b0a32e0cSBarry Smith #define __FUNC__ "MatCreate_MPISBAIJ"
1538b5df2d14SHong Zhang int MatCreate_MPISBAIJ(Mat B)
1539b5df2d14SHong Zhang {
1540b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1541ca54ac64SHong Zhang   int          ierr;
1542b5df2d14SHong Zhang   PetscTruth   flg;
1543b5df2d14SHong Zhang 
1544b5df2d14SHong Zhang   PetscFunctionBegin;
1545b5df2d14SHong Zhang 
1546b0a32e0cSBarry Smith   ierr    = PetscNew(Mat_MPISBAIJ,&b);CHKERRQ(ierr);
1547b0a32e0cSBarry Smith   B->data = (void*)b;
1548b5df2d14SHong Zhang   ierr    = PetscMemzero(b,sizeof(Mat_MPISBAIJ));CHKERRQ(ierr);
1549b5df2d14SHong Zhang   ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1550b5df2d14SHong Zhang 
1551b5df2d14SHong Zhang   B->ops->destroy    = MatDestroy_MPISBAIJ;
1552b5df2d14SHong Zhang   B->ops->view       = MatView_MPISBAIJ;
1553b5df2d14SHong Zhang   B->mapping    = 0;
1554b5df2d14SHong Zhang   B->factor     = 0;
1555b5df2d14SHong Zhang   B->assembled  = PETSC_FALSE;
1556b5df2d14SHong Zhang 
1557b5df2d14SHong Zhang   B->insertmode = NOT_SET_VALUES;
1558b5df2d14SHong Zhang   ierr = MPI_Comm_rank(B->comm,&b->rank);CHKERRQ(ierr);
1559b5df2d14SHong Zhang   ierr = MPI_Comm_size(B->comm,&b->size);CHKERRQ(ierr);
1560b5df2d14SHong Zhang 
1561b5df2d14SHong Zhang   /* build local table of row and column ownerships */
156282502324SSatish Balay   ierr          = PetscMalloc(3*(b->size+2)*sizeof(int),&b->rowners);CHKERRQ(ierr);
1563273d9f13SBarry Smith   b->cowners    = b->rowners + b->size + 2;
1564273d9f13SBarry Smith   b->rowners_bs = b->cowners + b->size + 2;
1565b0a32e0cSBarry Smith   PetscLogObjectMemory(B,3*(b->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1566b5df2d14SHong Zhang 
1567b5df2d14SHong Zhang   /* build cache for off array entries formed */
1568b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
1569b5df2d14SHong Zhang   b->donotstash  = PETSC_FALSE;
1570b5df2d14SHong Zhang   b->colmap      = PETSC_NULL;
1571b5df2d14SHong Zhang   b->garray      = PETSC_NULL;
1572b5df2d14SHong Zhang   b->roworiented = PETSC_TRUE;
1573b5df2d14SHong Zhang 
1574*f2a5309cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
1575b5df2d14SHong Zhang   /* stuff for MatSetValues_XXX in single precision */
1576b5df2d14SHong Zhang   b->lensetvalues     = 0;
1577b5df2d14SHong Zhang   b->setvaluescopy    = PETSC_NULL;
1578b5df2d14SHong Zhang #endif
1579b5df2d14SHong Zhang 
1580b5df2d14SHong Zhang   /* stuff used in block assembly */
1581b5df2d14SHong Zhang   b->barray       = 0;
1582b5df2d14SHong Zhang 
1583b5df2d14SHong Zhang   /* stuff used for matrix vector multiply */
1584b5df2d14SHong Zhang   b->lvec         = 0;
1585b5df2d14SHong Zhang   b->Mvctx        = 0;
1586b5df2d14SHong Zhang 
1587b5df2d14SHong Zhang   /* stuff for MatGetRow() */
1588b5df2d14SHong Zhang   b->rowindices   = 0;
1589b5df2d14SHong Zhang   b->rowvalues    = 0;
1590b5df2d14SHong Zhang   b->getrowactive = PETSC_FALSE;
1591b5df2d14SHong Zhang 
1592b5df2d14SHong Zhang   /* hash table stuff */
1593b5df2d14SHong Zhang   b->ht           = 0;
1594b5df2d14SHong Zhang   b->hd           = 0;
1595b5df2d14SHong Zhang   b->ht_size      = 0;
1596b5df2d14SHong Zhang   b->ht_flag      = PETSC_FALSE;
1597b5df2d14SHong Zhang   b->ht_fact      = 0;
1598b5df2d14SHong Zhang   b->ht_total_ct  = 0;
1599b5df2d14SHong Zhang   b->ht_insert_ct = 0;
1600b5df2d14SHong Zhang 
1601b0a32e0cSBarry Smith   ierr = PetscOptionsHasName(PETSC_NULL,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
1602b5df2d14SHong Zhang   if (flg) {
1603b5df2d14SHong Zhang     double fact = 1.39;
1604b5df2d14SHong Zhang     ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
1605b0a32e0cSBarry Smith     ierr = PetscOptionsGetDouble(PETSC_NULL,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
1606b5df2d14SHong Zhang     if (fact <= 1.0) fact = 1.39;
1607b5df2d14SHong Zhang     ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
1608b0a32e0cSBarry Smith     PetscLogInfo(0,"MatCreateMPISBAIJ:Hash table Factor used %5.2f\n",fact);
1609b5df2d14SHong Zhang   }
1610b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
1611b5df2d14SHong Zhang                                      "MatStoreValues_MPISBAIJ",
1612b5df2d14SHong Zhang                                      MatStoreValues_MPISBAIJ);CHKERRQ(ierr);
1613b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
1614b5df2d14SHong Zhang                                      "MatRetrieveValues_MPISBAIJ",
1615b5df2d14SHong Zhang                                      MatRetrieveValues_MPISBAIJ);CHKERRQ(ierr);
1616b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
1617b5df2d14SHong Zhang                                      "MatGetDiagonalBlock_MPISBAIJ",
1618b5df2d14SHong Zhang                                      MatGetDiagonalBlock_MPISBAIJ);CHKERRQ(ierr);
1619b5df2d14SHong Zhang   PetscFunctionReturn(0);
1620b5df2d14SHong Zhang }
1621273d9f13SBarry Smith EXTERN_C_END
1622b5df2d14SHong Zhang 
1623b5df2d14SHong Zhang #undef __FUNC__
1624b0a32e0cSBarry Smith #define __FUNC__ "MatMPISBAIJSetPreallocation"
1625b5df2d14SHong Zhang /*@C
1626b5df2d14SHong Zhang    MatMPISBAIJSetPreallocation - For good matrix assembly performance
1627b5df2d14SHong Zhang    the user should preallocate the matrix storage by setting the parameters
1628b5df2d14SHong Zhang    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1629b5df2d14SHong Zhang    performance can be increased by more than a factor of 50.
1630b5df2d14SHong Zhang 
1631b5df2d14SHong Zhang    Collective on Mat
1632b5df2d14SHong Zhang 
1633b5df2d14SHong Zhang    Input Parameters:
1634b5df2d14SHong Zhang +  A - the matrix
1635b5df2d14SHong Zhang .  bs   - size of blockk
1636b5df2d14SHong Zhang .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1637b5df2d14SHong Zhang            submatrix  (same for all local rows)
1638b5df2d14SHong Zhang .  d_nnz - array containing the number of block nonzeros in the various block rows
1639b5df2d14SHong Zhang            of the in diagonal portion of the local (possibly different for each block
1640b5df2d14SHong Zhang            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1641b5df2d14SHong Zhang .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1642b5df2d14SHong Zhang            submatrix (same for all local rows).
1643b5df2d14SHong Zhang -  o_nnz - array containing the number of nonzeros in the various block rows of the
1644b5df2d14SHong Zhang            off-diagonal portion of the local submatrix (possibly different for
1645b5df2d14SHong Zhang            each block row) or PETSC_NULL.
1646b5df2d14SHong Zhang 
1647b5df2d14SHong Zhang 
1648b5df2d14SHong Zhang    Options Database Keys:
1649b5df2d14SHong Zhang .   -mat_no_unroll - uses code that does not unroll the loops in the
1650b5df2d14SHong Zhang                      block calculations (much slower)
1651b5df2d14SHong Zhang .   -mat_block_size - size of the blocks to use
1652b5df2d14SHong Zhang 
1653b5df2d14SHong Zhang    Notes:
1654b5df2d14SHong Zhang 
1655b5df2d14SHong Zhang    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1656b5df2d14SHong Zhang    than it must be used on all processors that share the object for that argument.
1657b5df2d14SHong Zhang 
1658b5df2d14SHong Zhang    Storage Information:
1659b5df2d14SHong Zhang    For a square global matrix we define each processor's diagonal portion
1660b5df2d14SHong Zhang    to be its local rows and the corresponding columns (a square submatrix);
1661b5df2d14SHong Zhang    each processor's off-diagonal portion encompasses the remainder of the
1662b5df2d14SHong Zhang    local matrix (a rectangular submatrix).
1663b5df2d14SHong Zhang 
1664b5df2d14SHong Zhang    The user can specify preallocated storage for the diagonal part of
1665b5df2d14SHong Zhang    the local submatrix with either d_nz or d_nnz (not both).  Set
1666b5df2d14SHong Zhang    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1667b5df2d14SHong Zhang    memory allocation.  Likewise, specify preallocated storage for the
1668b5df2d14SHong Zhang    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1669b5df2d14SHong Zhang 
1670b5df2d14SHong Zhang    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1671b5df2d14SHong Zhang    the figure below we depict these three local rows and all columns (0-11).
1672b5df2d14SHong Zhang 
1673b5df2d14SHong Zhang .vb
1674b5df2d14SHong Zhang            0 1 2 3 4 5 6 7 8 9 10 11
1675b5df2d14SHong Zhang           -------------------
1676b5df2d14SHong Zhang    row 3  |  o o o d d d o o o o o o
1677b5df2d14SHong Zhang    row 4  |  o o o d d d o o o o o o
1678b5df2d14SHong Zhang    row 5  |  o o o d d d o o o o o o
1679b5df2d14SHong Zhang           -------------------
1680b5df2d14SHong Zhang .ve
1681b5df2d14SHong Zhang 
1682b5df2d14SHong Zhang    Thus, any entries in the d locations are stored in the d (diagonal)
1683b5df2d14SHong Zhang    submatrix, and any entries in the o locations are stored in the
1684b5df2d14SHong Zhang    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1685b5df2d14SHong Zhang    stored simply in the MATSEQBAIJ format for compressed row storage.
1686b5df2d14SHong Zhang 
1687b5df2d14SHong Zhang    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1688b5df2d14SHong Zhang    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1689b5df2d14SHong Zhang    In general, for PDE problems in which most nonzeros are near the diagonal,
1690b5df2d14SHong Zhang    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1691b5df2d14SHong Zhang    or you will get TERRIBLE performance; see the users' manual chapter on
1692b5df2d14SHong Zhang    matrices.
1693b5df2d14SHong Zhang 
1694b5df2d14SHong Zhang    Level: intermediate
1695b5df2d14SHong Zhang 
1696b5df2d14SHong Zhang .keywords: matrix, block, aij, compressed row, sparse, parallel
1697b5df2d14SHong Zhang 
1698b5df2d14SHong Zhang .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1699b5df2d14SHong Zhang @*/
1700b5df2d14SHong Zhang 
1701b5df2d14SHong Zhang int MatMPISBAIJSetPreallocation(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz)
1702b5df2d14SHong Zhang {
1703b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1704ca54ac64SHong Zhang   int          ierr,i,mbs,Mbs=PETSC_DECIDE;
1705273d9f13SBarry Smith   PetscTruth   flg2;
1706b5df2d14SHong Zhang 
1707b5df2d14SHong Zhang   PetscFunctionBegin;
1708273d9f13SBarry Smith   ierr = PetscTypeCompare((PetscObject)B,MATMPISBAIJ,&flg2);CHKERRQ(ierr);
1709273d9f13SBarry Smith   if (!flg2) PetscFunctionReturn(0);
1710273d9f13SBarry Smith 
1711b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1712b5df2d14SHong Zhang 
1713b5df2d14SHong Zhang   if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
1714b5df2d14SHong Zhang   if (d_nz < -2) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than -2: value %d",d_nz);
1715b5df2d14SHong Zhang   if (o_nz < -2) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than -2: value %d",o_nz);
1716b5df2d14SHong Zhang   if (d_nnz) {
1717b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1718b5df2d14SHong Zhang       if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %d value %d",i,d_nnz[i]);
1719b5df2d14SHong Zhang     }
1720b5df2d14SHong Zhang   }
1721b5df2d14SHong Zhang   if (o_nnz) {
1722b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1723b5df2d14SHong Zhang       if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %d value %d",i,o_nnz[i]);
1724b5df2d14SHong Zhang     }
1725b5df2d14SHong Zhang   }
172619138431SHong Zhang   B->preallocated = PETSC_TRUE;
172719138431SHong Zhang   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->m,&B->M);CHKERRQ(ierr);
172819138431SHong Zhang   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->n,&B->N);CHKERRQ(ierr);
172919138431SHong Zhang   ierr = MapCreateMPI(B->comm,B->m,B->M,&B->rmap);CHKERRQ(ierr);
173019138431SHong Zhang   ierr = MapCreateMPI(B->comm,B->m,B->M,&B->cmap);CHKERRQ(ierr);
1731b5df2d14SHong Zhang 
1732b5df2d14SHong Zhang   b   = (Mat_MPISBAIJ*)B->data;
1733b5df2d14SHong Zhang   mbs = B->m/bs;
1734b5df2d14SHong Zhang   Mbs = B->M/bs;
1735b5df2d14SHong Zhang   if (mbs*bs != B->m) {
173619138431SHong Zhang     SETERRQ2(PETSC_ERR_ARG_SIZ,"No of local rows %d must be divisible by blocksize %d",B->m,bs);
1737b5df2d14SHong Zhang   }
1738b5df2d14SHong Zhang 
1739b5df2d14SHong Zhang   b->bs  = bs;
1740b5df2d14SHong Zhang   b->bs2 = bs*bs;
1741b5df2d14SHong Zhang   b->mbs = mbs;
1742b5df2d14SHong Zhang   b->nbs = mbs;
1743b5df2d14SHong Zhang   b->Mbs = Mbs;
1744b5df2d14SHong Zhang   b->Nbs = Mbs;
1745b5df2d14SHong Zhang 
1746b5df2d14SHong Zhang   ierr = MPI_Allgather(&b->mbs,1,MPI_INT,b->rowners+1,1,MPI_INT,B->comm);CHKERRQ(ierr);
1747b5df2d14SHong Zhang   b->rowners[0]    = 0;
1748b5df2d14SHong Zhang   for (i=2; i<=b->size; i++) {
1749b5df2d14SHong Zhang     b->rowners[i] += b->rowners[i-1];
1750b5df2d14SHong Zhang   }
1751b5df2d14SHong Zhang   b->rstart    = b->rowners[b->rank];
1752b5df2d14SHong Zhang   b->rend      = b->rowners[b->rank+1];
1753b5df2d14SHong Zhang   b->cstart    = b->rstart;
1754b5df2d14SHong Zhang   b->cend      = b->rend;
1755b5df2d14SHong Zhang   for (i=0; i<=b->size; i++) {
1756b5df2d14SHong Zhang     b->rowners_bs[i] = b->rowners[i]*bs;
1757b5df2d14SHong Zhang   }
1758b5df2d14SHong Zhang   b->rstart_bs = b-> rstart*bs;
1759b5df2d14SHong Zhang   b->rend_bs   = b->rend*bs;
1760b5df2d14SHong Zhang 
1761b5df2d14SHong Zhang   b->cstart_bs = b->cstart*bs;
1762b5df2d14SHong Zhang   b->cend_bs   = b->cend*bs;
1763b5df2d14SHong Zhang 
1764b5df2d14SHong Zhang 
1765b5df2d14SHong Zhang   if (d_nz == PETSC_DEFAULT) d_nz = 5;
1766b5df2d14SHong Zhang   ierr = MatCreateSeqSBAIJ(PETSC_COMM_SELF,bs,B->m,B->m,d_nz,d_nnz,&b->A);CHKERRQ(ierr);
1767b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->A);
1768b5df2d14SHong Zhang   if (o_nz == PETSC_DEFAULT) o_nz = 0;
1769b5df2d14SHong Zhang   ierr = MatCreateSeqBAIJ(PETSC_COMM_SELF,bs,B->m,B->M,o_nz,o_nnz,&b->B);CHKERRQ(ierr);
1770b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->B);
1771b5df2d14SHong Zhang 
1772b5df2d14SHong Zhang   /* build cache for off array entries formed */
1773b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);
1774b5df2d14SHong Zhang 
1775b5df2d14SHong Zhang   PetscFunctionReturn(0);
1776b5df2d14SHong Zhang }
1777b5df2d14SHong Zhang 
1778b5df2d14SHong Zhang #undef __FUNC__
1779b0a32e0cSBarry Smith #define __FUNC__ "MatCreateMPISBAIJ"
1780a30f8f8cSSatish Balay /*@C
1781a30f8f8cSSatish Balay    MatCreateMPISBAIJ - Creates a sparse parallel matrix in symmetric block AIJ format
1782a30f8f8cSSatish Balay    (block compressed row).  For good matrix assembly performance
1783a30f8f8cSSatish Balay    the user should preallocate the matrix storage by setting the parameters
1784a30f8f8cSSatish Balay    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1785a30f8f8cSSatish Balay    performance can be increased by more than a factor of 50.
1786a30f8f8cSSatish Balay 
1787a30f8f8cSSatish Balay    Collective on MPI_Comm
1788a30f8f8cSSatish Balay 
1789a30f8f8cSSatish Balay    Input Parameters:
1790a30f8f8cSSatish Balay +  comm - MPI communicator
1791a30f8f8cSSatish Balay .  bs   - size of blockk
1792a30f8f8cSSatish Balay .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
1793a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1794a30f8f8cSSatish Balay            y vector for the matrix-vector product y = Ax.
1795a30f8f8cSSatish Balay .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
1796a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1797a30f8f8cSSatish Balay            x vector for the matrix-vector product y = Ax.
1798a30f8f8cSSatish Balay .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
1799a30f8f8cSSatish Balay .  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
1800a30f8f8cSSatish Balay .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1801a30f8f8cSSatish Balay            submatrix  (same for all local rows)
1802a30f8f8cSSatish Balay .  d_nnz - array containing the number of block nonzeros in the various block rows
1803a30f8f8cSSatish Balay            of the in diagonal portion of the local (possibly different for each block
1804a30f8f8cSSatish Balay            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1805a30f8f8cSSatish Balay .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1806a30f8f8cSSatish Balay            submatrix (same for all local rows).
1807a30f8f8cSSatish Balay -  o_nnz - array containing the number of nonzeros in the various block rows of the
1808a30f8f8cSSatish Balay            off-diagonal portion of the local submatrix (possibly different for
1809a30f8f8cSSatish Balay            each block row) or PETSC_NULL.
1810a30f8f8cSSatish Balay 
1811a30f8f8cSSatish Balay    Output Parameter:
1812a30f8f8cSSatish Balay .  A - the matrix
1813a30f8f8cSSatish Balay 
1814a30f8f8cSSatish Balay    Options Database Keys:
1815a30f8f8cSSatish Balay .   -mat_no_unroll - uses code that does not unroll the loops in the
1816a30f8f8cSSatish Balay                      block calculations (much slower)
1817a30f8f8cSSatish Balay .   -mat_block_size - size of the blocks to use
1818a30f8f8cSSatish Balay .   -mat_mpi - use the parallel matrix data structures even on one processor
1819a30f8f8cSSatish Balay                (defaults to using SeqBAIJ format on one processor)
1820a30f8f8cSSatish Balay 
1821a30f8f8cSSatish Balay    Notes:
1822a30f8f8cSSatish Balay    The user MUST specify either the local or global matrix dimensions
1823a30f8f8cSSatish Balay    (possibly both).
1824a30f8f8cSSatish Balay 
1825a30f8f8cSSatish Balay    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1826a30f8f8cSSatish Balay    than it must be used on all processors that share the object for that argument.
1827a30f8f8cSSatish Balay 
1828a30f8f8cSSatish Balay    Storage Information:
1829a30f8f8cSSatish Balay    For a square global matrix we define each processor's diagonal portion
1830a30f8f8cSSatish Balay    to be its local rows and the corresponding columns (a square submatrix);
1831a30f8f8cSSatish Balay    each processor's off-diagonal portion encompasses the remainder of the
1832a30f8f8cSSatish Balay    local matrix (a rectangular submatrix).
1833a30f8f8cSSatish Balay 
1834a30f8f8cSSatish Balay    The user can specify preallocated storage for the diagonal part of
1835a30f8f8cSSatish Balay    the local submatrix with either d_nz or d_nnz (not both).  Set
1836a30f8f8cSSatish Balay    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1837a30f8f8cSSatish Balay    memory allocation.  Likewise, specify preallocated storage for the
1838a30f8f8cSSatish Balay    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1839a30f8f8cSSatish Balay 
1840a30f8f8cSSatish Balay    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1841a30f8f8cSSatish Balay    the figure below we depict these three local rows and all columns (0-11).
1842a30f8f8cSSatish Balay 
1843a30f8f8cSSatish Balay .vb
1844a30f8f8cSSatish Balay            0 1 2 3 4 5 6 7 8 9 10 11
1845a30f8f8cSSatish Balay           -------------------
1846a30f8f8cSSatish Balay    row 3  |  o o o d d d o o o o o o
1847a30f8f8cSSatish Balay    row 4  |  o o o d d d o o o o o o
1848a30f8f8cSSatish Balay    row 5  |  o o o d d d o o o o o o
1849a30f8f8cSSatish Balay           -------------------
1850a30f8f8cSSatish Balay .ve
1851a30f8f8cSSatish Balay 
1852a30f8f8cSSatish Balay    Thus, any entries in the d locations are stored in the d (diagonal)
1853a30f8f8cSSatish Balay    submatrix, and any entries in the o locations are stored in the
1854a30f8f8cSSatish Balay    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1855a30f8f8cSSatish Balay    stored simply in the MATSEQBAIJ format for compressed row storage.
1856a30f8f8cSSatish Balay 
1857a30f8f8cSSatish Balay    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1858a30f8f8cSSatish Balay    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1859a30f8f8cSSatish Balay    In general, for PDE problems in which most nonzeros are near the diagonal,
1860a30f8f8cSSatish Balay    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1861a30f8f8cSSatish Balay    or you will get TERRIBLE performance; see the users' manual chapter on
1862a30f8f8cSSatish Balay    matrices.
1863a30f8f8cSSatish Balay 
1864a30f8f8cSSatish Balay    Level: intermediate
1865a30f8f8cSSatish Balay 
1866a30f8f8cSSatish Balay .keywords: matrix, block, aij, compressed row, sparse, parallel
1867a30f8f8cSSatish Balay 
1868a209d233SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1869a30f8f8cSSatish Balay @*/
1870a30f8f8cSSatish Balay 
1871a30f8f8cSSatish Balay int MatCreateMPISBAIJ(MPI_Comm comm,int bs,int m,int n,int M,int N,int d_nz,int *d_nnz,int o_nz,int *o_nnz,Mat *A)
1872a30f8f8cSSatish Balay {
1873273d9f13SBarry Smith   int ierr,size;
1874a30f8f8cSSatish Balay 
1875a30f8f8cSSatish Balay   PetscFunctionBegin;
1876b5df2d14SHong Zhang   ierr = MatCreate(comm,m,n,M,N,A);CHKERRQ(ierr);
1877273d9f13SBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1878273d9f13SBarry Smith   if (size > 1) {
1879b5df2d14SHong Zhang     ierr = MatSetType(*A,MATMPISBAIJ);CHKERRQ(ierr);
1880b5df2d14SHong Zhang     ierr = MatMPISBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
1881273d9f13SBarry Smith   } else {
1882273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQSBAIJ);CHKERRQ(ierr);
1883273d9f13SBarry Smith     ierr = MatSeqSBAIJSetPreallocation(*A,bs,d_nz,d_nnz);CHKERRQ(ierr);
1884273d9f13SBarry Smith   }
1885a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1886a30f8f8cSSatish Balay }
1887a30f8f8cSSatish Balay 
1888a30f8f8cSSatish Balay 
1889a30f8f8cSSatish Balay #undef __FUNC__
1890b0a32e0cSBarry Smith #define __FUNC__ "MatDuplicate_MPISBAIJ"
1891a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
1892a30f8f8cSSatish Balay {
1893a30f8f8cSSatish Balay   Mat          mat;
1894a30f8f8cSSatish Balay   Mat_MPISBAIJ *a,*oldmat = (Mat_MPISBAIJ*)matin->data;
1895a30f8f8cSSatish Balay   int          ierr,len=0;
1896a30f8f8cSSatish Balay 
1897a30f8f8cSSatish Balay   PetscFunctionBegin;
1898a30f8f8cSSatish Balay   *newmat       = 0;
1899b5df2d14SHong Zhang   ierr = MatCreate(matin->comm,matin->m,matin->n,matin->M,matin->N,&mat);CHKERRQ(ierr);
1900b5df2d14SHong Zhang   ierr = MatSetType(mat,MATMPISBAIJ);CHKERRQ(ierr);
1901273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
1902b5df2d14SHong Zhang   a = (Mat_MPISBAIJ*)mat->data;
1903a30f8f8cSSatish Balay   a->bs  = oldmat->bs;
1904a30f8f8cSSatish Balay   a->bs2 = oldmat->bs2;
1905a30f8f8cSSatish Balay   a->mbs = oldmat->mbs;
1906a30f8f8cSSatish Balay   a->nbs = oldmat->nbs;
1907a30f8f8cSSatish Balay   a->Mbs = oldmat->Mbs;
1908a30f8f8cSSatish Balay   a->Nbs = oldmat->Nbs;
1909a30f8f8cSSatish Balay 
1910a30f8f8cSSatish Balay   a->rstart       = oldmat->rstart;
1911a30f8f8cSSatish Balay   a->rend         = oldmat->rend;
1912a30f8f8cSSatish Balay   a->cstart       = oldmat->cstart;
1913a30f8f8cSSatish Balay   a->cend         = oldmat->cend;
1914a30f8f8cSSatish Balay   a->size         = oldmat->size;
1915a30f8f8cSSatish Balay   a->rank         = oldmat->rank;
1916a30f8f8cSSatish Balay   a->donotstash   = oldmat->donotstash;
1917a30f8f8cSSatish Balay   a->roworiented  = oldmat->roworiented;
1918a30f8f8cSSatish Balay   a->rowindices   = 0;
1919a30f8f8cSSatish Balay   a->rowvalues    = 0;
1920a30f8f8cSSatish Balay   a->getrowactive = PETSC_FALSE;
1921a30f8f8cSSatish Balay   a->barray       = 0;
1922a30f8f8cSSatish Balay   a->rstart_bs    = oldmat->rstart_bs;
1923a30f8f8cSSatish Balay   a->rend_bs      = oldmat->rend_bs;
1924a30f8f8cSSatish Balay   a->cstart_bs    = oldmat->cstart_bs;
1925a30f8f8cSSatish Balay   a->cend_bs      = oldmat->cend_bs;
1926a30f8f8cSSatish Balay 
1927a30f8f8cSSatish Balay   /* hash table stuff */
1928a30f8f8cSSatish Balay   a->ht           = 0;
1929a30f8f8cSSatish Balay   a->hd           = 0;
1930a30f8f8cSSatish Balay   a->ht_size      = 0;
1931a30f8f8cSSatish Balay   a->ht_flag      = oldmat->ht_flag;
1932a30f8f8cSSatish Balay   a->ht_fact      = oldmat->ht_fact;
1933a30f8f8cSSatish Balay   a->ht_total_ct  = 0;
1934a30f8f8cSSatish Balay   a->ht_insert_ct = 0;
1935a30f8f8cSSatish Balay 
193682502324SSatish Balay   ierr = PetscMalloc(3*(a->size+2)*sizeof(int),&a->rowners);CHKERRQ(ierr);
1937b0a32e0cSBarry Smith   PetscLogObjectMemory(mat,3*(a->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1938a30f8f8cSSatish Balay   a->cowners    = a->rowners + a->size + 2;
1939a30f8f8cSSatish Balay   a->rowners_bs = a->cowners + a->size + 2;
1940a30f8f8cSSatish Balay   ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(int));CHKERRQ(ierr);
1941a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
1942a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,oldmat->bs,&mat->bstash);CHKERRQ(ierr);
1943a30f8f8cSSatish Balay   if (oldmat->colmap) {
1944a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
1945a30f8f8cSSatish Balay     ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
1946a30f8f8cSSatish Balay #else
194782502324SSatish Balay     ierr = PetscMalloc((a->Nbs)*sizeof(int),&a->colmap);CHKERRQ(ierr);
1948b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,(a->Nbs)*sizeof(int));
1949a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(int));CHKERRQ(ierr);
1950a30f8f8cSSatish Balay #endif
1951a30f8f8cSSatish Balay   } else a->colmap = 0;
1952a30f8f8cSSatish Balay   if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
195382502324SSatish Balay     ierr = PetscMalloc(len*sizeof(int),&a->garray);CHKERRQ(ierr);
1954b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,len*sizeof(int));
1955a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));CHKERRQ(ierr);
1956a30f8f8cSSatish Balay   } else a->garray = 0;
1957a30f8f8cSSatish Balay 
1958a30f8f8cSSatish Balay   ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
1959b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->lvec);
1960a30f8f8cSSatish Balay   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
1961a30f8f8cSSatish Balay 
1962b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->Mvctx);
1963a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
1964b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->A);
1965a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
1966b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->B);
1967b0a32e0cSBarry Smith   ierr = PetscFListDuplicate(mat->qlist,&matin->qlist);CHKERRQ(ierr);
1968a30f8f8cSSatish Balay   *newmat = mat;
1969a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1970a30f8f8cSSatish Balay }
1971a30f8f8cSSatish Balay 
1972a30f8f8cSSatish Balay #include "petscsys.h"
1973a30f8f8cSSatish Balay 
1974273d9f13SBarry Smith EXTERN_C_BEGIN
1975a30f8f8cSSatish Balay #undef __FUNC__
1976b0a32e0cSBarry Smith #define __FUNC__ "MatLoad_MPISBAIJ"
1977b0a32e0cSBarry Smith int MatLoad_MPISBAIJ(PetscViewer viewer,MatType type,Mat *newmat)
1978a30f8f8cSSatish Balay {
1979a30f8f8cSSatish Balay   Mat          A;
1980a30f8f8cSSatish Balay   int          i,nz,ierr,j,rstart,rend,fd;
1981a30f8f8cSSatish Balay   Scalar       *vals,*buf;
1982a30f8f8cSSatish Balay   MPI_Comm     comm = ((PetscObject)viewer)->comm;
1983a30f8f8cSSatish Balay   MPI_Status   status;
1984a30f8f8cSSatish Balay   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,*browners,maxnz,*cols;
1985a30f8f8cSSatish Balay   int          *locrowlens,*sndcounts = 0,*procsnz = 0,jj,*mycols,*ibuf;
1986a30f8f8cSSatish Balay   int          tag = ((PetscObject)viewer)->tag,bs=1,Mbs,mbs,extra_rows;
1987a30f8f8cSSatish Balay   int          *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
1988a30f8f8cSSatish Balay   int          dcount,kmax,k,nzcount,tmp;
1989a30f8f8cSSatish Balay 
1990a30f8f8cSSatish Balay   PetscFunctionBegin;
1991b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1992a30f8f8cSSatish Balay 
1993a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1994a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
1995a30f8f8cSSatish Balay   if (!rank) {
1996b0a32e0cSBarry Smith     ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
1997a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
199829bbc08cSBarry Smith     if (header[0] != MAT_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
1999a30f8f8cSSatish Balay     if (header[3] < 0) {
200029bbc08cSBarry Smith       SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format, cannot load as MPISBAIJ");
2001a30f8f8cSSatish Balay     }
2002a30f8f8cSSatish Balay   }
2003a30f8f8cSSatish Balay 
2004a30f8f8cSSatish Balay   ierr = MPI_Bcast(header+1,3,MPI_INT,0,comm);CHKERRQ(ierr);
2005a30f8f8cSSatish Balay   M = header[1]; N = header[2];
2006a30f8f8cSSatish Balay 
200729bbc08cSBarry Smith   if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");
2008a30f8f8cSSatish Balay 
2009a30f8f8cSSatish Balay   /*
2010a30f8f8cSSatish Balay      This code adds extra rows to make sure the number of rows is
2011a30f8f8cSSatish Balay      divisible by the blocksize
2012a30f8f8cSSatish Balay   */
2013a30f8f8cSSatish Balay   Mbs        = M/bs;
2014a30f8f8cSSatish Balay   extra_rows = bs - M + bs*(Mbs);
2015a30f8f8cSSatish Balay   if (extra_rows == bs) extra_rows = 0;
2016a30f8f8cSSatish Balay   else                  Mbs++;
2017a30f8f8cSSatish Balay   if (extra_rows &&!rank) {
2018b0a32e0cSBarry Smith     PetscLogInfo(0,"MatLoad_MPISBAIJ:Padding loaded matrix to match blocksize\n");
2019a30f8f8cSSatish Balay   }
2020a30f8f8cSSatish Balay 
2021a30f8f8cSSatish Balay   /* determine ownership of all rows */
2022a30f8f8cSSatish Balay   mbs        = Mbs/size + ((Mbs % size) > rank);
2023a30f8f8cSSatish Balay   m          = mbs*bs;
2024b0a32e0cSBarry Smith   ierr       = PetscMalloc(2*(size+2)*sizeof(int),&rowners);CHKERRQ(ierr);
2025a30f8f8cSSatish Balay   browners   = rowners + size + 1;
2026a30f8f8cSSatish Balay   ierr       = MPI_Allgather(&mbs,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
2027a30f8f8cSSatish Balay   rowners[0] = 0;
2028a30f8f8cSSatish Balay   for (i=2; i<=size; i++) rowners[i] += rowners[i-1];
2029a30f8f8cSSatish Balay   for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
2030a30f8f8cSSatish Balay   rstart = rowners[rank];
2031a30f8f8cSSatish Balay   rend   = rowners[rank+1];
2032a30f8f8cSSatish Balay 
2033a30f8f8cSSatish Balay   /* distribute row lengths to all processors */
203482502324SSatish Balay   ierr = PetscMalloc((rend-rstart)*bs*sizeof(int),&locrowlens);CHKERRQ(ierr);
2035a30f8f8cSSatish Balay   if (!rank) {
2036b0a32e0cSBarry Smith     ierr = PetscMalloc((M+extra_rows)*sizeof(int),&rowlengths);CHKERRQ(ierr);
2037a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
2038a30f8f8cSSatish Balay     for (i=0; i<extra_rows; i++) rowlengths[M+i] = 1;
203982502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&sndcounts);CHKERRQ(ierr);
2040a30f8f8cSSatish Balay     for (i=0; i<size; i++) sndcounts[i] = browners[i+1] - browners[i];
2041a30f8f8cSSatish Balay     ierr = MPI_Scatterv(rowlengths,sndcounts,browners,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2042a30f8f8cSSatish Balay     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
2043a30f8f8cSSatish Balay   } else {
2044a30f8f8cSSatish Balay     ierr = MPI_Scatterv(0,0,0,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2045a30f8f8cSSatish Balay   }
2046a30f8f8cSSatish Balay 
20470222edb1SHong Zhang   if (!rank) {   /* procs[0] */
2048a30f8f8cSSatish Balay     /* calculate the number of nonzeros on each processor */
204982502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&procsnz);CHKERRQ(ierr);
2050a30f8f8cSSatish Balay     ierr = PetscMemzero(procsnz,size*sizeof(int));CHKERRQ(ierr);
2051a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2052a30f8f8cSSatish Balay       for (j=rowners[i]*bs; j< rowners[i+1]*bs; j++) {
2053a30f8f8cSSatish Balay         procsnz[i] += rowlengths[j];
2054a30f8f8cSSatish Balay       }
2055a30f8f8cSSatish Balay     }
2056a30f8f8cSSatish Balay     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
2057a30f8f8cSSatish Balay 
2058a30f8f8cSSatish Balay     /* determine max buffer needed and allocate it */
2059a30f8f8cSSatish Balay     maxnz = 0;
2060a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2061a30f8f8cSSatish Balay       maxnz = PetscMax(maxnz,procsnz[i]);
2062a30f8f8cSSatish Balay     }
206382502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(int),&cols);CHKERRQ(ierr);
2064a30f8f8cSSatish Balay 
2065a30f8f8cSSatish Balay     /* read in my part of the matrix column indices  */
2066a30f8f8cSSatish Balay     nz     = procsnz[0];
206782502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2068a30f8f8cSSatish Balay     mycols = ibuf;
2069a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2070a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
2071a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }
2072a30f8f8cSSatish Balay 
2073a30f8f8cSSatish Balay     /* read in every ones (except the last) and ship off */
2074a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2075a30f8f8cSSatish Balay       nz   = procsnz[i];
2076a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2077a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz,MPI_INT,i,tag,comm);CHKERRQ(ierr);
2078a30f8f8cSSatish Balay     }
2079a30f8f8cSSatish Balay     /* read in the stuff for the last proc */
2080a30f8f8cSSatish Balay     if (size != 1) {
2081a30f8f8cSSatish Balay       nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
2082a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2083a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
2084a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz+extra_rows,MPI_INT,size-1,tag,comm);CHKERRQ(ierr);
2085a30f8f8cSSatish Balay     }
2086a30f8f8cSSatish Balay     ierr = PetscFree(cols);CHKERRQ(ierr);
20870222edb1SHong Zhang   } else {  /* procs[i], i>0 */
2088a30f8f8cSSatish Balay     /* determine buffer space needed for message */
2089a30f8f8cSSatish Balay     nz = 0;
2090a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2091a30f8f8cSSatish Balay       nz += locrowlens[i];
2092a30f8f8cSSatish Balay     }
209382502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
2094a30f8f8cSSatish Balay     mycols = ibuf;
2095a30f8f8cSSatish Balay     /* receive message of column indices*/
2096a30f8f8cSSatish Balay     ierr = MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);CHKERRQ(ierr);
2097a30f8f8cSSatish Balay     ierr = MPI_Get_count(&status,MPI_INT,&maxnz);CHKERRQ(ierr);
209829bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2099a30f8f8cSSatish Balay   }
2100a30f8f8cSSatish Balay 
2101a30f8f8cSSatish Balay   /* loop over local rows, determining number of off diagonal entries */
210282502324SSatish Balay   ierr     = PetscMalloc(2*(rend-rstart+1)*sizeof(int),&dlens);CHKERRQ(ierr);
2103a30f8f8cSSatish Balay   odlens   = dlens + (rend-rstart);
210482502324SSatish Balay   ierr     = PetscMalloc(3*Mbs*sizeof(int),&mask);CHKERRQ(ierr);
2105a30f8f8cSSatish Balay   ierr     = PetscMemzero(mask,3*Mbs*sizeof(int));CHKERRQ(ierr);
2106a30f8f8cSSatish Balay   masked1  = mask    + Mbs;
2107a30f8f8cSSatish Balay   masked2  = masked1 + Mbs;
2108a30f8f8cSSatish Balay   rowcount = 0; nzcount = 0;
2109a30f8f8cSSatish Balay   for (i=0; i<mbs; i++) {
2110a30f8f8cSSatish Balay     dcount  = 0;
2111a30f8f8cSSatish Balay     odcount = 0;
2112a30f8f8cSSatish Balay     for (j=0; j<bs; j++) {
2113a30f8f8cSSatish Balay       kmax = locrowlens[rowcount];
2114a30f8f8cSSatish Balay       for (k=0; k<kmax; k++) {
21150222edb1SHong Zhang         tmp = mycols[nzcount++]/bs; /* block col. index */
2116a30f8f8cSSatish Balay         if (!mask[tmp]) {
2117a30f8f8cSSatish Balay           mask[tmp] = 1;
21180222edb1SHong Zhang           if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp; /* entry in off-diag portion */
21190222edb1SHong Zhang           else masked1[dcount++] = tmp; /* entry in diag portion */
2120a30f8f8cSSatish Balay         }
2121a30f8f8cSSatish Balay       }
2122a30f8f8cSSatish Balay       rowcount++;
2123a30f8f8cSSatish Balay     }
2124a30f8f8cSSatish Balay 
21250222edb1SHong Zhang     dlens[i]  = dcount;  /* d_nzz[i] */
21260222edb1SHong Zhang     odlens[i] = odcount; /* o_nzz[i] */
2127a30f8f8cSSatish Balay 
2128a30f8f8cSSatish Balay     /* zero out the mask elements we set */
2129a30f8f8cSSatish Balay     for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
2130a30f8f8cSSatish Balay     for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
2131a30f8f8cSSatish Balay   }
2132a30f8f8cSSatish Balay 
2133a30f8f8cSSatish Balay   /* create our matrix */
21347e06b45fSHong Zhang   ierr = MatCreateMPISBAIJ(comm,bs,m,m,PETSC_DETERMINE,PETSC_DETERMINE,0,dlens,0,odlens,newmat);
2135bfe19f1aSHong Zhang   CHKERRQ(ierr);
2136a30f8f8cSSatish Balay   A = *newmat;
2137273d9f13SBarry Smith   ierr = MatSetOption(A,MAT_COLUMNS_SORTED);CHKERRQ(ierr);
2138a30f8f8cSSatish Balay 
2139a30f8f8cSSatish Balay   if (!rank) {
214082502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(Scalar),&buf);CHKERRQ(ierr);
2141a30f8f8cSSatish Balay     /* read in my part of the matrix numerical values  */
2142a30f8f8cSSatish Balay     nz = procsnz[0];
2143a30f8f8cSSatish Balay     vals = buf;
2144a30f8f8cSSatish Balay     mycols = ibuf;
2145a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2146a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2147a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }
2148a30f8f8cSSatish Balay 
2149a30f8f8cSSatish Balay     /* insert into matrix */
2150a30f8f8cSSatish Balay     jj      = rstart*bs;
2151a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
21527e06b45fSHong Zhang       ierr = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2153a30f8f8cSSatish Balay       mycols += locrowlens[i];
2154a30f8f8cSSatish Balay       vals   += locrowlens[i];
2155a30f8f8cSSatish Balay       jj++;
2156a30f8f8cSSatish Balay     }
21577e06b45fSHong Zhang 
2158a30f8f8cSSatish Balay     /* read in other processors (except the last one) and ship out */
2159a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2160a30f8f8cSSatish Balay       nz   = procsnz[i];
2161a30f8f8cSSatish Balay       vals = buf;
2162a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2163a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
2164a30f8f8cSSatish Balay     }
2165a30f8f8cSSatish Balay     /* the last proc */
2166a30f8f8cSSatish Balay     if (size != 1){
2167a30f8f8cSSatish Balay       nz   = procsnz[i] - extra_rows;
2168a30f8f8cSSatish Balay       vals = buf;
2169a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2170a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
2171a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
2172a30f8f8cSSatish Balay     }
2173a30f8f8cSSatish Balay     ierr = PetscFree(procsnz);CHKERRQ(ierr);
21747e06b45fSHong Zhang 
2175a30f8f8cSSatish Balay   } else {
2176a30f8f8cSSatish Balay     /* receive numeric values */
217782502324SSatish Balay     ierr = PetscMalloc(nz*sizeof(Scalar),&buf);CHKERRQ(ierr);
2178a30f8f8cSSatish Balay 
2179a30f8f8cSSatish Balay     /* receive message of values*/
2180a30f8f8cSSatish Balay     vals   = buf;
2181a30f8f8cSSatish Balay     mycols = ibuf;
2182a30f8f8cSSatish Balay     ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
2183a30f8f8cSSatish Balay     ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
218429bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2185a30f8f8cSSatish Balay 
2186a30f8f8cSSatish Balay     /* insert into matrix */
2187a30f8f8cSSatish Balay     jj      = rstart*bs;
2188a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2189a30f8f8cSSatish Balay       ierr    = MatSetValues_MPISBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2190a30f8f8cSSatish Balay       mycols += locrowlens[i];
2191a30f8f8cSSatish Balay       vals   += locrowlens[i];
2192a30f8f8cSSatish Balay       jj++;
2193a30f8f8cSSatish Balay     }
2194a30f8f8cSSatish Balay   }
21957e06b45fSHong Zhang 
2196a30f8f8cSSatish Balay   ierr = PetscFree(locrowlens);CHKERRQ(ierr);
2197a30f8f8cSSatish Balay   ierr = PetscFree(buf);CHKERRQ(ierr);
2198a30f8f8cSSatish Balay   ierr = PetscFree(ibuf);CHKERRQ(ierr);
2199a30f8f8cSSatish Balay   ierr = PetscFree(rowners);CHKERRQ(ierr);
2200a30f8f8cSSatish Balay   ierr = PetscFree(dlens);CHKERRQ(ierr);
2201a30f8f8cSSatish Balay   ierr = PetscFree(mask);CHKERRQ(ierr);
2202a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2203a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2204a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2205a30f8f8cSSatish Balay }
2206273d9f13SBarry Smith EXTERN_C_END
2207a30f8f8cSSatish Balay 
2208a30f8f8cSSatish Balay #undef __FUNC__
2209b0a32e0cSBarry Smith #define __FUNC__ "MatMPISBAIJSetHashTableFactor"
2210a30f8f8cSSatish Balay /*@
2211a30f8f8cSSatish Balay    MatMPISBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.
2212a30f8f8cSSatish Balay 
2213a30f8f8cSSatish Balay    Input Parameters:
2214a30f8f8cSSatish Balay .  mat  - the matrix
2215a30f8f8cSSatish Balay .  fact - factor
2216a30f8f8cSSatish Balay 
2217a30f8f8cSSatish Balay    Collective on Mat
2218a30f8f8cSSatish Balay 
2219a30f8f8cSSatish Balay    Level: advanced
2220a30f8f8cSSatish Balay 
2221a30f8f8cSSatish Balay   Notes:
2222a30f8f8cSSatish Balay    This can also be set by the command line option: -mat_use_hash_table fact
2223a30f8f8cSSatish Balay 
2224a30f8f8cSSatish Balay .keywords: matrix, hashtable, factor, HT
2225a30f8f8cSSatish Balay 
2226a30f8f8cSSatish Balay .seealso: MatSetOption()
2227a30f8f8cSSatish Balay @*/
2228a30f8f8cSSatish Balay int MatMPISBAIJSetHashTableFactor(Mat mat,PetscReal fact)
2229a30f8f8cSSatish Balay {
2230a30f8f8cSSatish Balay   PetscFunctionBegin;
223129bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
223296e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
2233a30f8f8cSSatish Balay }
223424d5174aSHong Zhang 
223524d5174aSHong Zhang #undef __FUNC__
2236b0a32e0cSBarry Smith #define __FUNC__ "MatGetRowMax_MPISBAIJ"
223724d5174aSHong Zhang int MatGetRowMax_MPISBAIJ(Mat A,Vec v)
223824d5174aSHong Zhang {
223924d5174aSHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
2240f4c0e9e4SHong Zhang   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(a->B)->data;
2241ca54ac64SHong Zhang   PetscReal    atmp;
2242ca54ac64SHong Zhang   double       *work,*svalues,*rvalues;
2243ca54ac64SHong Zhang   int          ierr,i,bs,mbs,*bi,*bj,brow,j,ncols,krow,kcol,col,row,Mbs,bcol;
2244154bba0bSHong Zhang   int          rank,size,*rowners_bs,dest,count,source;
2245ca54ac64SHong Zhang   Scalar       *ba,*va;
2246f4c0e9e4SHong Zhang   MPI_Status   stat;
224724d5174aSHong Zhang 
224824d5174aSHong Zhang   PetscFunctionBegin;
2249d36791b2SHong Zhang   ierr = MatGetRowMax(a->A,v);CHKERRQ(ierr);
2250f4c0e9e4SHong Zhang   ierr = VecGetArray(v,&va);CHKERRQ(ierr);
2251f4c0e9e4SHong Zhang 
2252ac355199SBarry Smith   ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr);
2253ac355199SBarry Smith   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
2254f4c0e9e4SHong Zhang 
2255f4c0e9e4SHong Zhang   bs   = a->bs;
2256f4c0e9e4SHong Zhang   mbs  = a->mbs;
2257f4c0e9e4SHong Zhang   Mbs  = a->Mbs;
2258f4c0e9e4SHong Zhang   ba   = b->a;
2259f4c0e9e4SHong Zhang   bi   = b->i;
2260f4c0e9e4SHong Zhang   bj   = b->j;
2261ca54ac64SHong Zhang   /*
2262f4c0e9e4SHong Zhang   PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] M: %d, bs: %d, mbs: %d \n",rank,bs*Mbs,bs,mbs);
2263f4c0e9e4SHong Zhang   PetscSynchronizedFlush(PETSC_COMM_WORLD);
2264ca54ac64SHong Zhang   */
2265f4c0e9e4SHong Zhang 
2266f4c0e9e4SHong Zhang   /* find ownerships */
2267f4c0e9e4SHong Zhang   rowners_bs = a->rowners_bs;
2268f4c0e9e4SHong Zhang   /*
226904d41228SHong Zhang   if (!rank){
227004d41228SHong Zhang     for (i=0; i<size+1; i++) PetscPrintf(PETSC_COMM_SELF," rowners_bs[%d]: %d\n",i,rowners_bs[i]);
2271f4c0e9e4SHong Zhang   }
2272f4c0e9e4SHong Zhang   */
2273f4c0e9e4SHong Zhang 
2274f4c0e9e4SHong Zhang   /* each proc creates an array to be distributed */
227582502324SSatish Balay   ierr = PetscMalloc(bs*Mbs*sizeof(PetscReal),&work);CHKERRQ(ierr);
2276ca54ac64SHong Zhang   ierr = PetscMemzero(work,bs*Mbs*sizeof(PetscReal));CHKERRQ(ierr);
2277f4c0e9e4SHong Zhang 
2278f4c0e9e4SHong Zhang   /* row_max for B */
2279b8475685SHong Zhang   if (rank != size-1){
2280f4c0e9e4SHong Zhang     for (i=0; i<mbs; i++) {
2281f4c0e9e4SHong Zhang       ncols = bi[1] - bi[0]; bi++;
2282f4c0e9e4SHong Zhang       brow  = bs*i;
2283f4c0e9e4SHong Zhang       for (j=0; j<ncols; j++){
2284f4c0e9e4SHong Zhang         bcol = bs*(*bj);
2285f4c0e9e4SHong Zhang         for (kcol=0; kcol<bs; kcol++){
2286ca54ac64SHong Zhang           col = bcol + kcol;                 /* local col index */
228704d41228SHong Zhang           col += rowners_bs[rank+1];      /* global col index */
2288ca54ac64SHong Zhang           /* PetscPrintf(PETSC_COMM_SELF,"[%d], col: %d\n",rank,col); */
2289f4c0e9e4SHong Zhang           for (krow=0; krow<bs; krow++){
2290f4c0e9e4SHong Zhang             atmp = PetscAbsScalar(*ba); ba++;
2291ca54ac64SHong Zhang             row = brow + krow;    /* local row index */
2292f4c0e9e4SHong Zhang             /* printf("val[%d,%d]: %g\n",row,col,atmp); */
2293ca54ac64SHong Zhang             if (PetscRealPart(va[row]) < atmp) va[row] = atmp;
2294f4c0e9e4SHong Zhang             if (work[col] < atmp) work[col] = atmp;
2295f4c0e9e4SHong Zhang           }
2296f4c0e9e4SHong Zhang         }
2297f4c0e9e4SHong Zhang         bj++;
2298f4c0e9e4SHong Zhang       }
2299f4c0e9e4SHong Zhang     }
230004d41228SHong Zhang     /*
230104d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d], work: ",rank);
230204d41228SHong Zhang       for (i=0; i<bs*Mbs; i++) PetscPrintf(PETSC_COMM_SELF,"%g ",work[i]);
230304d41228SHong Zhang       PetscPrintf(PETSC_COMM_SELF,"[%d]: \n");
230404d41228SHong Zhang       */
2305f4c0e9e4SHong Zhang 
2306f4c0e9e4SHong Zhang     /* send values to its owners */
2307f4c0e9e4SHong Zhang     for (dest=rank+1; dest<size; dest++){
2308f4c0e9e4SHong Zhang       svalues = work + rowners_bs[dest];
2309ca54ac64SHong Zhang       count = rowners_bs[dest+1]-rowners_bs[dest];
2310273d9f13SBarry Smith       ierr = MPI_Send(svalues,count,MPI_DOUBLE,dest,rank,PETSC_COMM_WORLD);CHKERRQ(ierr);
2311ca54ac64SHong Zhang       /*
231204d41228SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] sends %d values to [%d]: %g, %g, %g, %g\n",rank,count,dest,svalues[0],svalues[1],svalues[2],svalues[3]);
2313f4c0e9e4SHong Zhang       PetscSynchronizedFlush(PETSC_COMM_WORLD);
2314ca54ac64SHong Zhang       */
2315ca54ac64SHong Zhang     }
2316f4c0e9e4SHong Zhang   }
2317f4c0e9e4SHong Zhang 
2318f4c0e9e4SHong Zhang   /* receive values */
2319ca54ac64SHong Zhang   if (rank){
2320f4c0e9e4SHong Zhang     rvalues = work;
2321ca54ac64SHong Zhang     count = rowners_bs[rank+1]-rowners_bs[rank];
2322f4c0e9e4SHong Zhang     for (source=0; source<rank; source++){
2323154bba0bSHong Zhang       ierr = MPI_Recv(rvalues,count,MPI_DOUBLE,MPI_ANY_SOURCE,MPI_ANY_TAG,PETSC_COMM_WORLD,&stat);CHKERRQ(ierr);
2324f4c0e9e4SHong Zhang       /* process values */
2325f4c0e9e4SHong Zhang       for (i=0; i<count; i++){
2326ca54ac64SHong Zhang         if (PetscRealPart(va[i]) < rvalues[i]) va[i] = rvalues[i];
2327f4c0e9e4SHong Zhang       }
2328ca54ac64SHong Zhang       /*
232904d41228SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] received %d values from [%d]: %g, %g, %g, %g \n",rank,count,stat.MPI_SOURCE,rvalues[0],rvalues[1],rvalues[2],rvalues[3]);
2330f4c0e9e4SHong Zhang       PetscSynchronizedFlush(PETSC_COMM_WORLD);
2331ca54ac64SHong Zhang       */
2332f4c0e9e4SHong Zhang     }
2333ca54ac64SHong Zhang   }
2334f4c0e9e4SHong Zhang 
2335f4c0e9e4SHong Zhang   ierr = VecRestoreArray(v,&va);CHKERRQ(ierr);
2336ac355199SBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
233724d5174aSHong Zhang   PetscFunctionReturn(0);
233824d5174aSHong Zhang }
2339