xref: /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c (revision f4c0e9e4ebe8230159eb1fcc6659f554c3dc3baa)
1*f4c0e9e4SHong Zhang /*$Id: mpisbaij.c,v 1.28 2000/10/16 19:54:11 hzhang Exp hzhang $*/
2a30f8f8cSSatish Balay 
3c8117e22SSatish Balay #include "src/mat/impls/baij/mpi/mpibaij.h"    /*I "petscmat.h" I*/
4a30f8f8cSSatish Balay #include "src/vec/vecimpl.h"
5a30f8f8cSSatish Balay #include "mpisbaij.h"
6a30f8f8cSSatish Balay #include "src/mat/impls/sbaij/seq/sbaij.h"
7a30f8f8cSSatish Balay 
8a30f8f8cSSatish Balay extern int MatSetUpMultiply_MPISBAIJ(Mat);
9a30f8f8cSSatish Balay extern int DisAssemble_MPISBAIJ(Mat);
10a30f8f8cSSatish Balay extern int MatIncreaseOverlap_MPISBAIJ(Mat,int,IS *,int);
11a30f8f8cSSatish Balay extern int MatGetSubMatrices_MPISBAIJ(Mat,int,IS *,IS *,MatReuse,Mat **);
12a30f8f8cSSatish Balay extern int MatGetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *);
13a30f8f8cSSatish Balay extern int MatSetValues_SeqSBAIJ(Mat,int,int *,int,int *,Scalar *,InsertMode);
14a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ(Mat,int,int*,int,int*,Scalar*,InsertMode);
15a30f8f8cSSatish Balay extern int MatGetRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
16a30f8f8cSSatish Balay extern int MatRestoreRow_SeqSBAIJ(Mat,int,int*,int**,Scalar**);
17a30f8f8cSSatish Balay extern int MatPrintHelp_SeqSBAIJ(Mat);
18a30f8f8cSSatish Balay extern int MatZeroRows_SeqSBAIJ(Mat,IS,Scalar*);
1900319c27SSatish Balay extern int MatZeroRows_SeqBAIJ(Mat,IS,Scalar *);
20d0566740SHong Zhang extern int MatGetRowMax_MPISBAIJ(Mat,Vec);
21a30f8f8cSSatish Balay 
22a30f8f8cSSatish Balay /*  UGLY, ugly, ugly
23a30f8f8cSSatish Balay    When MatScalar == Scalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
24a30f8f8cSSatish Balay    not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
25a30f8f8cSSatish Balay    inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
26a30f8f8cSSatish Balay    converts the entries into single precision and then calls ..._MatScalar() to put them
27a30f8f8cSSatish Balay    into the single precision data structures.
28a30f8f8cSSatish Balay */
29a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
30a30f8f8cSSatish Balay extern int MatSetValuesBlocked_SeqSBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
31a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
32a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
33a30f8f8cSSatish Balay extern int MatSetValues_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
34a30f8f8cSSatish Balay extern int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
35a30f8f8cSSatish Balay #else
36a30f8f8cSSatish Balay #define MatSetValuesBlocked_SeqSBAIJ_MatScalar      MatSetValuesBlocked_SeqSBAIJ
37a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_MatScalar             MatSetValues_MPISBAIJ
38a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_MatScalar      MatSetValuesBlocked_MPISBAIJ
39a30f8f8cSSatish Balay #define MatSetValues_MPISBAIJ_HT_MatScalar          MatSetValues_MPISBAIJ_HT
40a30f8f8cSSatish Balay #define MatSetValuesBlocked_MPISBAIJ_HT_MatScalar   MatSetValuesBlocked_MPISBAIJ_HT
41a30f8f8cSSatish Balay #endif
42a30f8f8cSSatish Balay 
43a30f8f8cSSatish Balay EXTERN_C_BEGIN
44a30f8f8cSSatish Balay #undef __FUNC__
45f3566a2aSHong Zhang #define __FUNC__ /*<a name="MatStoreValues_MPISBAIJ"></a>*/"MatStoreValues_MPISBAIJ"
46a30f8f8cSSatish Balay int MatStoreValues_MPISBAIJ(Mat mat)
47a30f8f8cSSatish Balay {
48f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
49a30f8f8cSSatish Balay   int         ierr;
50a30f8f8cSSatish Balay 
51a30f8f8cSSatish Balay   PetscFunctionBegin;
52a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
53a30f8f8cSSatish Balay   ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
54a30f8f8cSSatish Balay   PetscFunctionReturn(0);
55a30f8f8cSSatish Balay }
56a30f8f8cSSatish Balay EXTERN_C_END
57a30f8f8cSSatish Balay 
58a30f8f8cSSatish Balay EXTERN_C_BEGIN
59a30f8f8cSSatish Balay #undef __FUNC__
60f3566a2aSHong Zhang #define __FUNC__ /*<a name="MatRetrieveValues_MPISBAIJ"></a>*/"MatRetrieveValues_MPISBAIJ"
61a30f8f8cSSatish Balay int MatRetrieveValues_MPISBAIJ(Mat mat)
62a30f8f8cSSatish Balay {
63f3566a2aSHong Zhang   Mat_MPISBAIJ *aij = (Mat_MPISBAIJ *)mat->data;
64a30f8f8cSSatish Balay   int         ierr;
65a30f8f8cSSatish Balay 
66a30f8f8cSSatish Balay   PetscFunctionBegin;
67a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
68a30f8f8cSSatish Balay   ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
69a30f8f8cSSatish Balay   PetscFunctionReturn(0);
70a30f8f8cSSatish Balay }
71a30f8f8cSSatish Balay EXTERN_C_END
72a30f8f8cSSatish Balay 
73a30f8f8cSSatish Balay /*
74a30f8f8cSSatish Balay      Local utility routine that creates a mapping from the global column
75a30f8f8cSSatish Balay    number to the local number in the off-diagonal part of the local
76a30f8f8cSSatish Balay    storage of the matrix.  This is done in a non scable way since the
77a30f8f8cSSatish Balay    length of colmap equals the global matrix length.
78a30f8f8cSSatish Balay */
79a30f8f8cSSatish Balay #undef __FUNC__
80a30f8f8cSSatish Balay #define __FUNC__ /*<a name="CreateColmap_MPISBAIJ_Private"></a>*/"CreateColmap_MPISBAIJ_Private"
81a30f8f8cSSatish Balay static int CreateColmap_MPISBAIJ_Private(Mat mat)
82a30f8f8cSSatish Balay {
83a30f8f8cSSatish Balay   PetscFunctionBegin;
8429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
8596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
86a30f8f8cSSatish Balay }
87a30f8f8cSSatish Balay 
88a30f8f8cSSatish Balay #define CHUNKSIZE  10
89a30f8f8cSSatish Balay 
90a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv) \
91a30f8f8cSSatish Balay { \
92a30f8f8cSSatish Balay  \
93a30f8f8cSSatish Balay     brow = row/bs;  \
94a30f8f8cSSatish Balay     rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
95a30f8f8cSSatish Balay     rmax = aimax[brow]; nrow = ailen[brow]; \
96a30f8f8cSSatish Balay       bcol = col/bs; \
97a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
98a30f8f8cSSatish Balay       low = 0; high = nrow; \
99a30f8f8cSSatish Balay       while (high-low > 3) { \
100a30f8f8cSSatish Balay         t = (low+high)/2; \
101a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
102a30f8f8cSSatish Balay         else              low  = t; \
103a30f8f8cSSatish Balay       } \
104a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
105a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
106a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
107a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
108a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
109a30f8f8cSSatish Balay           else                    *bap  = value;  \
110a30f8f8cSSatish Balay           goto a_noinsert; \
111a30f8f8cSSatish Balay         } \
112a30f8f8cSSatish Balay       } \
113a30f8f8cSSatish Balay       if (a->nonew == 1) goto a_noinsert; \
11429bbc08cSBarry Smith       else if (a->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
115a30f8f8cSSatish Balay       if (nrow >= rmax) { \
116a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
117a30f8f8cSSatish Balay         int       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
118a30f8f8cSSatish Balay         MatScalar *new_a; \
119a30f8f8cSSatish Balay  \
12029bbc08cSBarry Smith         if (a->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
121a30f8f8cSSatish Balay  \
122a30f8f8cSSatish Balay         /* malloc new storage space */ \
123a30f8f8cSSatish Balay         len     = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(int); \
124a30f8f8cSSatish Balay         new_a   = (MatScalar*)PetscMalloc(len);CHKPTRQ(new_a); \
125a30f8f8cSSatish Balay         new_j   = (int*)(new_a + bs2*new_nz); \
126a30f8f8cSSatish Balay         new_i   = new_j + new_nz; \
127a30f8f8cSSatish Balay  \
128a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
129a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
130a30f8f8cSSatish Balay         for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
131a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
132a30f8f8cSSatish Balay         len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
133a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
134a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
135a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(Scalar));CHKERRQ(ierr); \
136a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
137a30f8f8cSSatish Balay                     aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
138a30f8f8cSSatish Balay         /* free up old matrix storage */ \
139a30f8f8cSSatish Balay         ierr = PetscFree(a->a);CHKERRQ(ierr);  \
140a30f8f8cSSatish Balay         if (!a->singlemalloc) { \
141a30f8f8cSSatish Balay           ierr = PetscFree(a->i);CHKERRQ(ierr); \
142a30f8f8cSSatish Balay           ierr = PetscFree(a->j);CHKERRQ(ierr);\
143a30f8f8cSSatish Balay         } \
144a30f8f8cSSatish Balay         aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
145a30f8f8cSSatish Balay         a->singlemalloc = PETSC_TRUE; \
146a30f8f8cSSatish Balay  \
147a30f8f8cSSatish Balay         rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
148a30f8f8cSSatish Balay         rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
149a30f8f8cSSatish Balay         PLogObjectMemory(A,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
150a30f8f8cSSatish Balay         a->s_maxnz += bs2*CHUNKSIZE; \
151a30f8f8cSSatish Balay         a->reallocs++; \
152a30f8f8cSSatish Balay         a->s_nz++; \
153a30f8f8cSSatish Balay       } \
154a30f8f8cSSatish Balay       N = nrow++ - 1;  \
155a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
156a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
157a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
158a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
159a30f8f8cSSatish Balay       } \
160a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
161a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
162a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
163a30f8f8cSSatish Balay       a_noinsert:; \
164a30f8f8cSSatish Balay     ailen[brow] = nrow; \
165a30f8f8cSSatish Balay }
166a30f8f8cSSatish Balay #ifndef MatSetValues_SeqBAIJ_B_Private
167a30f8f8cSSatish Balay #define  MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv) \
168a30f8f8cSSatish Balay { \
169a30f8f8cSSatish Balay     brow = row/bs;  \
170a30f8f8cSSatish Balay     rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
171a30f8f8cSSatish Balay     rmax = bimax[brow]; nrow = bilen[brow]; \
172a30f8f8cSSatish Balay       bcol = col/bs; \
173a30f8f8cSSatish Balay       ridx = row % bs; cidx = col % bs; \
174a30f8f8cSSatish Balay       low = 0; high = nrow; \
175a30f8f8cSSatish Balay       while (high-low > 3) { \
176a30f8f8cSSatish Balay         t = (low+high)/2; \
177a30f8f8cSSatish Balay         if (rp[t] > bcol) high = t; \
178a30f8f8cSSatish Balay         else              low  = t; \
179a30f8f8cSSatish Balay       } \
180a30f8f8cSSatish Balay       for (_i=low; _i<high; _i++) { \
181a30f8f8cSSatish Balay         if (rp[_i] > bcol) break; \
182a30f8f8cSSatish Balay         if (rp[_i] == bcol) { \
183a30f8f8cSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
184a30f8f8cSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
185a30f8f8cSSatish Balay           else                    *bap  = value;  \
186a30f8f8cSSatish Balay           goto b_noinsert; \
187a30f8f8cSSatish Balay         } \
188a30f8f8cSSatish Balay       } \
189a30f8f8cSSatish Balay       if (b->nonew == 1) goto b_noinsert; \
19029bbc08cSBarry Smith       else if (b->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
191a30f8f8cSSatish Balay       if (nrow >= rmax) { \
192a30f8f8cSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
193a30f8f8cSSatish Balay         int       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
194a30f8f8cSSatish Balay         MatScalar *new_a; \
195a30f8f8cSSatish Balay  \
19629bbc08cSBarry Smith         if (b->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
197a30f8f8cSSatish Balay  \
198a30f8f8cSSatish Balay         /* malloc new storage space */ \
199a30f8f8cSSatish Balay         len     = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(int); \
200a30f8f8cSSatish Balay         new_a   = (MatScalar*)PetscMalloc(len);CHKPTRQ(new_a); \
201a30f8f8cSSatish Balay         new_j   = (int*)(new_a + bs2*new_nz); \
202a30f8f8cSSatish Balay         new_i   = new_j + new_nz; \
203a30f8f8cSSatish Balay  \
204a30f8f8cSSatish Balay         /* copy over old data into new slots */ \
205a30f8f8cSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
206a30f8f8cSSatish Balay         for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
207a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
208a30f8f8cSSatish Balay         len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
209a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
210a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
211a30f8f8cSSatish Balay         ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
212a30f8f8cSSatish Balay         ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
213a30f8f8cSSatish Balay                     ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
214a30f8f8cSSatish Balay         /* free up old matrix storage */ \
215a30f8f8cSSatish Balay         ierr = PetscFree(b->a);CHKERRQ(ierr);  \
216a30f8f8cSSatish Balay         if (!b->singlemalloc) { \
217a30f8f8cSSatish Balay           ierr = PetscFree(b->i);CHKERRQ(ierr); \
218a30f8f8cSSatish Balay           ierr = PetscFree(b->j);CHKERRQ(ierr); \
219a30f8f8cSSatish Balay         } \
220a30f8f8cSSatish Balay         ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
221a30f8f8cSSatish Balay         b->singlemalloc = PETSC_TRUE; \
222a30f8f8cSSatish Balay  \
223a30f8f8cSSatish Balay         rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
224a30f8f8cSSatish Balay         rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
225a30f8f8cSSatish Balay         PLogObjectMemory(B,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
226a30f8f8cSSatish Balay         b->maxnz += bs2*CHUNKSIZE; \
227a30f8f8cSSatish Balay         b->reallocs++; \
228a30f8f8cSSatish Balay         b->nz++; \
229a30f8f8cSSatish Balay       } \
230a30f8f8cSSatish Balay       N = nrow++ - 1;  \
231a30f8f8cSSatish Balay       /* shift up all the later entries in this row */ \
232a30f8f8cSSatish Balay       for (ii=N; ii>=_i; ii--) { \
233a30f8f8cSSatish Balay         rp[ii+1] = rp[ii]; \
234a30f8f8cSSatish Balay         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
235a30f8f8cSSatish Balay       } \
236a30f8f8cSSatish Balay       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
237a30f8f8cSSatish Balay       rp[_i]                      = bcol;  \
238a30f8f8cSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
239a30f8f8cSSatish Balay       b_noinsert:; \
240a30f8f8cSSatish Balay     bilen[brow] = nrow; \
241a30f8f8cSSatish Balay }
242a30f8f8cSSatish Balay #endif
243a30f8f8cSSatish Balay 
244a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
245a30f8f8cSSatish Balay #undef __FUNC__
246a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPISBAIJ"></a>*/"MatSetValues_MPISBAIJ"
247a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
248a30f8f8cSSatish Balay {
249a30f8f8cSSatish Balay   Mat_MPISBAIJ *b = (Mat_MPISBAIJ*)mat->data;
250a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
251a30f8f8cSSatish Balay   MatScalar   *vsingle;
252a30f8f8cSSatish Balay 
253a30f8f8cSSatish Balay   PetscFunctionBegin;
254a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
255a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
256a30f8f8cSSatish Balay     b->setvaluescopy = (MatScalar*)PetscMalloc(N*sizeof(MatScalar));CHKPTRQ(b->setvaluescopy);
257a30f8f8cSSatish Balay     b->setvalueslen  = N;
258a30f8f8cSSatish Balay   }
259a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
260a30f8f8cSSatish Balay 
261a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
262a30f8f8cSSatish Balay     vsingle[i] = v[i];
263a30f8f8cSSatish Balay   }
264a30f8f8cSSatish Balay   ierr = MatSetValues_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
265a30f8f8cSSatish Balay   PetscFunctionReturn(0);
266a30f8f8cSSatish Balay }
267a30f8f8cSSatish Balay 
268a30f8f8cSSatish Balay #undef __FUNC__
269a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValuesBlocked_MPISBAIJ"></a>*/"MatSetValuesBlocked_MPISBAIJ"
270a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
271a30f8f8cSSatish Balay {
272a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
273a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
274a30f8f8cSSatish Balay   MatScalar   *vsingle;
275a30f8f8cSSatish Balay 
276a30f8f8cSSatish Balay   PetscFunctionBegin;
277a30f8f8cSSatish Balay   if (N > b->setvalueslen) {
278a30f8f8cSSatish Balay     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
279a30f8f8cSSatish Balay     b->setvaluescopy = (MatScalar*)PetscMalloc(N*sizeof(MatScalar));CHKPTRQ(b->setvaluescopy);
280a30f8f8cSSatish Balay     b->setvalueslen  = N;
281a30f8f8cSSatish Balay   }
282a30f8f8cSSatish Balay   vsingle = b->setvaluescopy;
283a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
284a30f8f8cSSatish Balay     vsingle[i] = v[i];
285a30f8f8cSSatish Balay   }
286a30f8f8cSSatish Balay   ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
287a30f8f8cSSatish Balay   PetscFunctionReturn(0);
288a30f8f8cSSatish Balay }
289a30f8f8cSSatish Balay 
290a30f8f8cSSatish Balay #undef __FUNC__
291a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPISBAIJ_HT"></a>*/"MatSetValues_MPISBAIJ_HT"
292a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
293a30f8f8cSSatish Balay {
294a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
295a30f8f8cSSatish Balay   int         ierr,i,N = m*n;
296a30f8f8cSSatish Balay   MatScalar   *vsingle;
297a30f8f8cSSatish Balay 
298a30f8f8cSSatish Balay   PetscFunctionBegin;
29929bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3004d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
301a30f8f8cSSatish Balay }
302a30f8f8cSSatish Balay 
303a30f8f8cSSatish Balay #undef __FUNC__
304a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValuesBlocked_MPISBAIJ_HT"></a>*/"MatSetValuesBlocked_MPISBAIJ_HT"
305a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
306a30f8f8cSSatish Balay {
307a30f8f8cSSatish Balay   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
308a30f8f8cSSatish Balay   int         ierr,i,N = m*n*b->bs2;
309a30f8f8cSSatish Balay   MatScalar   *vsingle;
310a30f8f8cSSatish Balay 
311a30f8f8cSSatish Balay   PetscFunctionBegin;
31229bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
3134d76ade7SHong Zhang   /* PetscFunctionReturn(0); */
314a30f8f8cSSatish Balay }
315a30f8f8cSSatish Balay #endif
316a30f8f8cSSatish Balay 
317a30f8f8cSSatish Balay /* Only add/insert a(i,j) with i<=j (blocks).
318a30f8f8cSSatish Balay    Any a(i,j) with i>j input by user is ingored.
319a30f8f8cSSatish Balay */
320a30f8f8cSSatish Balay #undef __FUNC__
321a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPIBAIJ"></a>*/"MatSetValues_MPIBAIJ"
322a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
323a30f8f8cSSatish Balay {
324a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
325a30f8f8cSSatish Balay   MatScalar    value;
326b5df2d14SHong Zhang   PetscTruth   roworiented = baij->roworiented;
327a30f8f8cSSatish Balay   int          ierr,i,j,row,col;
328b5df2d14SHong Zhang   int          rstart_orig=baij->rstart_bs;
329a30f8f8cSSatish Balay   int          rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
330a30f8f8cSSatish Balay   int          cend_orig=baij->cend_bs,bs=baij->bs;
331a30f8f8cSSatish Balay 
332a30f8f8cSSatish Balay   /* Some Variables required in the macro */
333a30f8f8cSSatish Balay   Mat          A = baij->A;
334a30f8f8cSSatish Balay   Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)(A)->data;
335a30f8f8cSSatish Balay   int          *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
336a30f8f8cSSatish Balay   MatScalar    *aa=a->a;
337a30f8f8cSSatish Balay 
338a30f8f8cSSatish Balay   Mat          B = baij->B;
339a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(B)->data;
340a30f8f8cSSatish Balay   int          *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
341a30f8f8cSSatish Balay   MatScalar    *ba=b->a;
342a30f8f8cSSatish Balay 
343a30f8f8cSSatish Balay   int          *rp,ii,nrow,_i,rmax,N,brow,bcol;
344a30f8f8cSSatish Balay   int          low,high,t,ridx,cidx,bs2=a->bs2;
345a30f8f8cSSatish Balay   MatScalar    *ap,*bap;
346a30f8f8cSSatish Balay 
347a30f8f8cSSatish Balay   /* for stash */
348f65c83cfSHong Zhang   int          n_loc, *in_loc=0;
349f65c83cfSHong Zhang   MatScalar    *v_loc=0;
350a30f8f8cSSatish Balay 
351a30f8f8cSSatish Balay   PetscFunctionBegin;
352a30f8f8cSSatish Balay 
353a30f8f8cSSatish Balay   if(!baij->donotstash){
354a30f8f8cSSatish Balay     in_loc = (int*)PetscMalloc(n*sizeof(int));CHKPTRQ(in_loc);
355a30f8f8cSSatish Balay     v_loc  = (MatScalar*)PetscMalloc(n*sizeof(MatScalar));CHKPTRQ(v_loc);
356a30f8f8cSSatish Balay   }
357a30f8f8cSSatish Balay 
358a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
359a30f8f8cSSatish Balay     if (im[i] < 0) continue;
360a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
361b5df2d14SHong Zhang     if (im[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
362a30f8f8cSSatish Balay #endif
363a30f8f8cSSatish Balay     if (im[i] >= rstart_orig && im[i] < rend_orig) { /* this processor entry */
364a30f8f8cSSatish Balay       row = im[i] - rstart_orig;              /* local row index */
365a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
366f65c83cfSHong Zhang         if (im[i]/bs > in[j]/bs) continue;    /* ignore lower triangular blocks */
367a30f8f8cSSatish Balay         if (in[j] >= cstart_orig && in[j] < cend_orig){  /* diag entry (A) */
368a30f8f8cSSatish Balay           col = in[j] - cstart_orig;          /* local col index */
369a30f8f8cSSatish Balay           brow = row/bs; bcol = col/bs;
370a30f8f8cSSatish Balay           if (brow > bcol) continue;  /* ignore lower triangular blocks of A */
371a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
372a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_A_Private(row,col,value,addv);
373a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
374a30f8f8cSSatish Balay         } else if (in[j] < 0) continue;
375a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
376b5df2d14SHong Zhang         else if (in[j] >= mat->N) {SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Col too large");}
377a30f8f8cSSatish Balay #endif
378a30f8f8cSSatish Balay         else {  /* off-diag entry (B) */
379a30f8f8cSSatish Balay           if (mat->was_assembled) {
380a30f8f8cSSatish Balay             if (!baij->colmap) {
381a30f8f8cSSatish Balay               ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
382a30f8f8cSSatish Balay             }
383a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
384a30f8f8cSSatish Balay             ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
385a30f8f8cSSatish Balay             col  = col - 1 + in[j]%bs;
386a30f8f8cSSatish Balay #else
387a30f8f8cSSatish Balay             col = baij->colmap[in[j]/bs] - 1 + in[j]%bs;
388a30f8f8cSSatish Balay #endif
389a30f8f8cSSatish Balay             if (col < 0 && !((Mat_SeqSBAIJ*)(baij->A->data))->nonew) {
390a30f8f8cSSatish Balay               ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
391a30f8f8cSSatish Balay               col =  in[j];
392a30f8f8cSSatish Balay               /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
393a30f8f8cSSatish Balay               B = baij->B;
394a30f8f8cSSatish Balay               b = (Mat_SeqBAIJ*)(B)->data;
395a30f8f8cSSatish Balay               bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
396a30f8f8cSSatish Balay               ba=b->a;
397a30f8f8cSSatish Balay             }
398a30f8f8cSSatish Balay           } else col = in[j];
399a30f8f8cSSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
400a30f8f8cSSatish Balay           MatSetValues_SeqSBAIJ_B_Private(row,col,value,addv);
401a30f8f8cSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
402a30f8f8cSSatish Balay         }
403a30f8f8cSSatish Balay       }
404a30f8f8cSSatish Balay     } else {  /* off processor entry */
405a30f8f8cSSatish Balay       if (!baij->donotstash) {
406a30f8f8cSSatish Balay         n_loc = 0;
407a30f8f8cSSatish Balay         for (j=0; j<n; j++){
408f65c83cfSHong Zhang           if (im[i]/bs > in[j]/bs) continue; /* ignore lower triangular blocks */
409a30f8f8cSSatish Balay           in_loc[n_loc] = in[j];
410a30f8f8cSSatish Balay           if (roworiented) {
411a30f8f8cSSatish Balay             v_loc[n_loc] = v[i*n+j];
412a30f8f8cSSatish Balay           } else {
413a30f8f8cSSatish Balay             v_loc[n_loc] = v[j*m+i];
414a30f8f8cSSatish Balay           }
415a30f8f8cSSatish Balay           n_loc++;
416a30f8f8cSSatish Balay         }
417a30f8f8cSSatish Balay         ierr = MatStashValuesRow_Private(&mat->stash,im[i],n_loc,in_loc,v_loc);CHKERRQ(ierr);
418a30f8f8cSSatish Balay       }
419a30f8f8cSSatish Balay     }
420a30f8f8cSSatish Balay   }
421a30f8f8cSSatish Balay 
422a30f8f8cSSatish Balay   if(!baij->donotstash){
423a30f8f8cSSatish Balay     ierr = PetscFree(in_loc);CHKERRQ(ierr);
424a30f8f8cSSatish Balay     ierr = PetscFree(v_loc);CHKERRQ(ierr);
425a30f8f8cSSatish Balay   }
426a30f8f8cSSatish Balay   PetscFunctionReturn(0);
427a30f8f8cSSatish Balay }
428a30f8f8cSSatish Balay 
429a30f8f8cSSatish Balay #undef __FUNC__
430a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValuesBlocked_MPISBAIJ"></a>*/"MatSetValuesBlocked_MPISBAIJ"
431a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
432a30f8f8cSSatish Balay {
433a30f8f8cSSatish Balay   PetscFunctionBegin;
43429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
43596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
436a30f8f8cSSatish Balay }
437a30f8f8cSSatish Balay 
438a30f8f8cSSatish Balay #define HASH_KEY 0.6180339887
439a30f8f8cSSatish Balay #define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(int)((size)*(tmp-(int)tmp)))
440a30f8f8cSSatish Balay /* #define HASH(size,key) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
441a30f8f8cSSatish Balay /* #define HASH(size,key,tmp) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
442a30f8f8cSSatish Balay #undef __FUNC__
443a30f8f8cSSatish Balay #define __FUNC__ /*<a name="MatSetValues_MPISBAIJ_HT_MatScalar"></a>*/"MatSetValues_MPISBAIJ_HT_MatScalar"
444a30f8f8cSSatish Balay int MatSetValues_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
445a30f8f8cSSatish Balay {
446a30f8f8cSSatish Balay   PetscFunctionBegin;
44729bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
44896e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
449a30f8f8cSSatish Balay }
450a30f8f8cSSatish Balay 
451a30f8f8cSSatish Balay #undef __FUNC__
452a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatSetValuesBlocked_MPISBAIJ_HT_MatScalar"
453a30f8f8cSSatish Balay int MatSetValuesBlocked_MPISBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
454a30f8f8cSSatish Balay {
455a30f8f8cSSatish Balay   PetscFunctionBegin;
45629bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
45796e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
458a30f8f8cSSatish Balay }
459a30f8f8cSSatish Balay 
460a30f8f8cSSatish Balay #undef __FUNC__
461a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetValues_MPISBAIJ"
462a30f8f8cSSatish Balay int MatGetValues_MPISBAIJ(Mat mat,int m,int *idxm,int n,int *idxn,Scalar *v)
463a30f8f8cSSatish Balay {
464f3566a2aSHong Zhang   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
465a30f8f8cSSatish Balay   int          bs=baij->bs,ierr,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
466a30f8f8cSSatish Balay   int          bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;
467a30f8f8cSSatish Balay 
468a30f8f8cSSatish Balay   PetscFunctionBegin;
469a30f8f8cSSatish Balay   for (i=0; i<m; i++) {
47029bbc08cSBarry Smith     if (idxm[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
471b5df2d14SHong Zhang     if (idxm[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
472a30f8f8cSSatish Balay     if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
473a30f8f8cSSatish Balay       row = idxm[i] - bsrstart;
474a30f8f8cSSatish Balay       for (j=0; j<n; j++) {
47529bbc08cSBarry Smith         if (idxn[j] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative column");
476b5df2d14SHong Zhang         if (idxn[j] >= mat->N) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
477a30f8f8cSSatish Balay         if (idxn[j] >= bscstart && idxn[j] < bscend){
478a30f8f8cSSatish Balay           col = idxn[j] - bscstart;
479c8407628SSatish Balay           ierr = MatGetValues_SeqSBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
480a30f8f8cSSatish Balay         } else {
481a30f8f8cSSatish Balay           if (!baij->colmap) {
482a30f8f8cSSatish Balay             ierr = CreateColmap_MPISBAIJ_Private(mat);CHKERRQ(ierr);
483a30f8f8cSSatish Balay           }
484a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
485a30f8f8cSSatish Balay           ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
486a30f8f8cSSatish Balay           data --;
487a30f8f8cSSatish Balay #else
488a30f8f8cSSatish Balay           data = baij->colmap[idxn[j]/bs]-1;
489a30f8f8cSSatish Balay #endif
490a30f8f8cSSatish Balay           if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
491a30f8f8cSSatish Balay           else {
492a30f8f8cSSatish Balay             col  = data + idxn[j]%bs;
493c8407628SSatish Balay             ierr = MatGetValues_SeqSBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
494a30f8f8cSSatish Balay           }
495a30f8f8cSSatish Balay         }
496a30f8f8cSSatish Balay       }
497a30f8f8cSSatish Balay     } else {
49829bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
499a30f8f8cSSatish Balay     }
500a30f8f8cSSatish Balay   }
501a30f8f8cSSatish Balay  PetscFunctionReturn(0);
502a30f8f8cSSatish Balay }
503a30f8f8cSSatish Balay 
504a30f8f8cSSatish Balay #undef __FUNC__
505a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatNorm_MPISBAIJ"
506a30f8f8cSSatish Balay int MatNorm_MPISBAIJ(Mat mat,NormType type,PetscReal *norm)
507a30f8f8cSSatish Balay {
508a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
509bc0ba53dSHong Zhang   /* Mat_SeqSBAIJ *amat = (Mat_SeqSBAIJ*)baij->A->data; */
510bc0ba53dSHong Zhang   /* Mat_SeqBAIJ  *bmat = (Mat_SeqBAIJ*)baij->B->data; */
511a30f8f8cSSatish Balay   int        ierr;
512a30f8f8cSSatish Balay   PetscReal  sum[2],*lnorm2;
513a30f8f8cSSatish Balay 
514a30f8f8cSSatish Balay   PetscFunctionBegin;
515a30f8f8cSSatish Balay   if (baij->size == 1) {
516a30f8f8cSSatish Balay     ierr =  MatNorm(baij->A,type,norm);CHKERRQ(ierr);
517a30f8f8cSSatish Balay   } else {
518a30f8f8cSSatish Balay     if (type == NORM_FROBENIUS) {
519ee237329SHong Zhang       lnorm2 = (double*)PetscMalloc(2*sizeof(double));CHKPTRQ(lnorm2);
520a30f8f8cSSatish Balay       ierr =  MatNorm(baij->A,type,lnorm2);CHKERRQ(ierr);
521a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2++;            /* squar power of norm(A) */
522a30f8f8cSSatish Balay       ierr =  MatNorm(baij->B,type,lnorm2);CHKERRQ(ierr);
523a30f8f8cSSatish Balay       *lnorm2 = (*lnorm2)*(*lnorm2); lnorm2--;             /* squar power of norm(B) */
524a30f8f8cSSatish Balay       /*
525a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr);
526a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], lnorm2=%g, %g\n",rank,lnorm2[0],lnorm2[1]);
527a30f8f8cSSatish Balay       */
528a30f8f8cSSatish Balay       ierr = MPI_Allreduce(lnorm2,&sum,2,MPI_DOUBLE,MPI_SUM,mat->comm);CHKERRQ(ierr);
529a30f8f8cSSatish Balay       /*
530a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d], sum=%g, %g\n",rank,sum[0],sum[1]);
531a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD); */
532a30f8f8cSSatish Balay 
533a30f8f8cSSatish Balay       *norm = sqrt(sum[0] + 2*sum[1]);
534a30f8f8cSSatish Balay       ierr = PetscFree(lnorm2);CHKERRQ(ierr);
535a30f8f8cSSatish Balay     } else {
53629bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
537a30f8f8cSSatish Balay     }
538a30f8f8cSSatish Balay   }
539a30f8f8cSSatish Balay   PetscFunctionReturn(0);
540a30f8f8cSSatish Balay }
541a30f8f8cSSatish Balay 
542a30f8f8cSSatish Balay /*
543a30f8f8cSSatish Balay   Creates the hash table, and sets the table
544a30f8f8cSSatish Balay   This table is created only once.
545a30f8f8cSSatish Balay   If new entried need to be added to the matrix
546a30f8f8cSSatish Balay   then the hash table has to be destroyed and
547a30f8f8cSSatish Balay   recreated.
548a30f8f8cSSatish Balay */
549a30f8f8cSSatish Balay #undef __FUNC__
550a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatCreateHashTable_MPISBAIJ_Private"
551a30f8f8cSSatish Balay int MatCreateHashTable_MPISBAIJ_Private(Mat mat,PetscReal factor)
552a30f8f8cSSatish Balay {
553a30f8f8cSSatish Balay   PetscFunctionBegin;
55429bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
55596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
556a30f8f8cSSatish Balay }
557a30f8f8cSSatish Balay 
558a30f8f8cSSatish Balay #undef __FUNC__
559a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatAssemblyBegin_MPISBAIJ"
560a30f8f8cSSatish Balay int MatAssemblyBegin_MPISBAIJ(Mat mat,MatAssemblyType mode)
561a30f8f8cSSatish Balay {
562a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
563a30f8f8cSSatish Balay   int         ierr,nstash,reallocs;
564a30f8f8cSSatish Balay   InsertMode  addv;
565a30f8f8cSSatish Balay 
566a30f8f8cSSatish Balay   PetscFunctionBegin;
567a30f8f8cSSatish Balay   if (baij->donotstash) {
568a30f8f8cSSatish Balay     PetscFunctionReturn(0);
569a30f8f8cSSatish Balay   }
570a30f8f8cSSatish Balay 
571a30f8f8cSSatish Balay   /* make sure all processors are either in INSERTMODE or ADDMODE */
572a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
573a30f8f8cSSatish Balay   if (addv == (ADD_VALUES|INSERT_VALUES)) {
57429bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
575a30f8f8cSSatish Balay   }
576a30f8f8cSSatish Balay   mat->insertmode = addv; /* in case this processor had no cache */
577a30f8f8cSSatish Balay 
578a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
579a30f8f8cSSatish Balay   ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
580a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
581a30f8f8cSSatish Balay   PLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Stash has %d entries,uses %d mallocs.\n",nstash,reallocs);
582a30f8f8cSSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
583a30f8f8cSSatish Balay   PLogInfo(0,"MatAssemblyBegin_MPISBAIJ:Block-Stash has %d entries, uses %d mallocs.\n",nstash,reallocs);
584a30f8f8cSSatish Balay   PetscFunctionReturn(0);
585a30f8f8cSSatish Balay }
586a30f8f8cSSatish Balay 
587a30f8f8cSSatish Balay #undef __FUNC__
588a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatAssemblyEnd_MPISBAIJ"
589a30f8f8cSSatish Balay int MatAssemblyEnd_MPISBAIJ(Mat mat,MatAssemblyType mode)
590a30f8f8cSSatish Balay {
591a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij=(Mat_MPISBAIJ*)mat->data;
592a30f8f8cSSatish Balay   Mat_SeqSBAIJ  *a=(Mat_SeqSBAIJ*)baij->A->data;
593a30f8f8cSSatish Balay   Mat_SeqBAIJ  *b=(Mat_SeqBAIJ*)baij->B->data;
594a30f8f8cSSatish Balay   int         i,j,rstart,ncols,n,ierr,flg,bs2=baij->bs2;
595a30f8f8cSSatish Balay   int         *row,*col,other_disassembled;
596a30f8f8cSSatish Balay   PetscTruth  r1,r2,r3;
597a30f8f8cSSatish Balay   MatScalar   *val;
598a30f8f8cSSatish Balay   InsertMode  addv = mat->insertmode;
599a30f8f8cSSatish Balay   int         rank;
600a30f8f8cSSatish Balay 
601a30f8f8cSSatish Balay   PetscFunctionBegin;
602a30f8f8cSSatish Balay   /* remove 2 line below later */
603a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(PETSC_COMM_WORLD, &rank);CHKERRQ(ierr);
604a30f8f8cSSatish Balay 
605a30f8f8cSSatish Balay   if (!baij->donotstash) {
606a30f8f8cSSatish Balay     while (1) {
607a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
608a30f8f8cSSatish Balay       /*
609a30f8f8cSSatish Balay       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d]: in AssemblyEnd, stash, flg=%d\n",rank,flg);
610a30f8f8cSSatish Balay       PetscSynchronizedFlush(PETSC_COMM_WORLD);
611a30f8f8cSSatish Balay       */
612a30f8f8cSSatish Balay       if (!flg) break;
613a30f8f8cSSatish Balay 
614a30f8f8cSSatish Balay       for (i=0; i<n;) {
615a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
616a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
617a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
618a30f8f8cSSatish Balay         else       ncols = n-i;
619a30f8f8cSSatish Balay         /* Now assemble all these values with a single function call */
620a30f8f8cSSatish Balay         ierr = MatSetValues_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
621a30f8f8cSSatish Balay         i = j;
622a30f8f8cSSatish Balay       }
623a30f8f8cSSatish Balay     }
624a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
625a30f8f8cSSatish Balay     /* Now process the block-stash. Since the values are stashed column-oriented,
626a30f8f8cSSatish Balay        set the roworiented flag to column oriented, and after MatSetValues()
627a30f8f8cSSatish Balay        restore the original flags */
628a30f8f8cSSatish Balay     r1 = baij->roworiented;
629a30f8f8cSSatish Balay     r2 = a->roworiented;
630a30f8f8cSSatish Balay     r3 = b->roworiented;
631a30f8f8cSSatish Balay     baij->roworiented = PETSC_FALSE;
632a30f8f8cSSatish Balay     a->roworiented    = PETSC_FALSE;
633a30f8f8cSSatish Balay     b->roworiented    = PETSC_FALSE;
634a30f8f8cSSatish Balay     while (1) {
635a30f8f8cSSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
636a30f8f8cSSatish Balay       if (!flg) break;
637a30f8f8cSSatish Balay 
638a30f8f8cSSatish Balay       for (i=0; i<n;) {
639a30f8f8cSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
640a30f8f8cSSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
641a30f8f8cSSatish Balay         if (j < n) ncols = j-i;
642a30f8f8cSSatish Balay         else       ncols = n-i;
643a30f8f8cSSatish Balay         ierr = MatSetValuesBlocked_MPISBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
644a30f8f8cSSatish Balay         i = j;
645a30f8f8cSSatish Balay       }
646a30f8f8cSSatish Balay     }
647a30f8f8cSSatish Balay     ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
648a30f8f8cSSatish Balay     baij->roworiented = r1;
649a30f8f8cSSatish Balay     a->roworiented    = r2;
650a30f8f8cSSatish Balay     b->roworiented    = r3;
651a30f8f8cSSatish Balay   }
652a30f8f8cSSatish Balay 
653a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
654a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);
655a30f8f8cSSatish Balay 
656a30f8f8cSSatish Balay   /* determine if any processor has disassembled, if so we must
657a30f8f8cSSatish Balay      also disassemble ourselfs, in order that we may reassemble. */
658a30f8f8cSSatish Balay   /*
659a30f8f8cSSatish Balay      if nonzero structure of submatrix B cannot change then we know that
660a30f8f8cSSatish Balay      no processor disassembled thus we can skip this stuff
661a30f8f8cSSatish Balay   */
662a30f8f8cSSatish Balay   if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
663a30f8f8cSSatish Balay     ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
664a30f8f8cSSatish Balay     if (mat->was_assembled && !other_disassembled) {
665c8407628SSatish Balay       ierr = DisAssemble_MPISBAIJ(mat);CHKERRQ(ierr);
666a30f8f8cSSatish Balay     }
667a30f8f8cSSatish Balay   }
668a30f8f8cSSatish Balay 
669a30f8f8cSSatish Balay   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
670a30f8f8cSSatish Balay     ierr = MatSetUpMultiply_MPISBAIJ(mat);CHKERRQ(ierr);
671a30f8f8cSSatish Balay   }
672a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
673a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);
674a30f8f8cSSatish Balay 
675a30f8f8cSSatish Balay #if defined(PETSC_USE_BOPT_g)
676a30f8f8cSSatish Balay   if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
677a30f8f8cSSatish Balay     PLogInfo(0,"MatAssemblyEnd_MPISBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((double)baij->ht_total_ct)/baij->ht_insert_ct);
678a30f8f8cSSatish Balay     baij->ht_total_ct  = 0;
679a30f8f8cSSatish Balay     baij->ht_insert_ct = 0;
680a30f8f8cSSatish Balay   }
681a30f8f8cSSatish Balay #endif
682a30f8f8cSSatish Balay   if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
683c8407628SSatish Balay     ierr = MatCreateHashTable_MPISBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
684a30f8f8cSSatish Balay     mat->ops->setvalues        = MatSetValues_MPISBAIJ_HT;
685a30f8f8cSSatish Balay     mat->ops->setvaluesblocked = MatSetValuesBlocked_MPISBAIJ_HT;
686a30f8f8cSSatish Balay   }
687a30f8f8cSSatish Balay 
688a30f8f8cSSatish Balay   if (baij->rowvalues) {
689a30f8f8cSSatish Balay     ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
690a30f8f8cSSatish Balay     baij->rowvalues = 0;
691a30f8f8cSSatish Balay   }
692a30f8f8cSSatish Balay   PetscFunctionReturn(0);
693a30f8f8cSSatish Balay }
694a30f8f8cSSatish Balay 
695a30f8f8cSSatish Balay #undef __FUNC__
696a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatView_MPISBAIJ_ASCIIorDraworSocket"
697a30f8f8cSSatish Balay static int MatView_MPISBAIJ_ASCIIorDraworSocket(Mat mat,Viewer viewer)
698a30f8f8cSSatish Balay {
699a30f8f8cSSatish Balay   Mat_MPISBAIJ  *baij = (Mat_MPISBAIJ*)mat->data;
700a30f8f8cSSatish Balay   int          ierr,format,bs = baij->bs,size = baij->size,rank = baij->rank;
701a30f8f8cSSatish Balay   PetscTruth   isascii,isdraw;
70265d70643SHong Zhang   Viewer       sviewer;
703a30f8f8cSSatish Balay 
704a30f8f8cSSatish Balay   PetscFunctionBegin;
705a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,ASCII_VIEWER,&isascii);CHKERRQ(ierr);
706a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,DRAW_VIEWER,&isdraw);CHKERRQ(ierr);
707a30f8f8cSSatish Balay   if (isascii) {
708a30f8f8cSSatish Balay     ierr = ViewerGetFormat(viewer,&format);CHKERRQ(ierr);
709a30f8f8cSSatish Balay     if (format == VIEWER_FORMAT_ASCII_INFO_LONG) {
710a30f8f8cSSatish Balay       MatInfo info;
711a30f8f8cSSatish Balay       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
712a30f8f8cSSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
713a30f8f8cSSatish Balay       ierr = ViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %d nz %d nz alloced %d bs %d mem %d\n",
714b5df2d14SHong Zhang               rank,mat->m,(int)info.nz_used*bs,(int)info.nz_allocated*bs,
715a30f8f8cSSatish Balay               baij->bs,(int)info.memory);CHKERRQ(ierr);
716a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
717a30f8f8cSSatish Balay       ierr = ViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
718a30f8f8cSSatish Balay       ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
719a30f8f8cSSatish Balay       ierr = ViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
720a30f8f8cSSatish Balay       ierr = ViewerFlush(viewer);CHKERRQ(ierr);
721a30f8f8cSSatish Balay       ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
722a30f8f8cSSatish Balay       PetscFunctionReturn(0);
723a30f8f8cSSatish Balay     } else if (format == VIEWER_FORMAT_ASCII_INFO) {
724a30f8f8cSSatish Balay       ierr = ViewerASCIIPrintf(viewer,"  block size is %d\n",bs);CHKERRQ(ierr);
725a30f8f8cSSatish Balay       PetscFunctionReturn(0);
726a30f8f8cSSatish Balay     }
727a30f8f8cSSatish Balay   }
728a30f8f8cSSatish Balay 
729a30f8f8cSSatish Balay   if (isdraw) {
730a30f8f8cSSatish Balay     Draw       draw;
731a30f8f8cSSatish Balay     PetscTruth isnull;
732a30f8f8cSSatish Balay     ierr = ViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
733a30f8f8cSSatish Balay     ierr = DrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
734a30f8f8cSSatish Balay   }
735a30f8f8cSSatish Balay 
736a30f8f8cSSatish Balay   if (size == 1) {
737a30f8f8cSSatish Balay     ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
738a30f8f8cSSatish Balay   } else {
739a30f8f8cSSatish Balay     /* assemble the entire matrix onto first processor. */
740a30f8f8cSSatish Balay     Mat         A;
74165d70643SHong Zhang     Mat_SeqSBAIJ *Aloc;
74265d70643SHong Zhang     Mat_SeqBAIJ *Bloc;
743b5df2d14SHong Zhang     int         M = mat->M,N = mat->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
744a30f8f8cSSatish Balay     MatScalar   *a;
745a30f8f8cSSatish Balay 
746a30f8f8cSSatish Balay     if (!rank) {
747bc0ba53dSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,M,N,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
748a30f8f8cSSatish Balay     } else {
749f65c83cfSHong Zhang       ierr = MatCreateMPISBAIJ(mat->comm,baij->bs,0,0,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
750a30f8f8cSSatish Balay     }
751a30f8f8cSSatish Balay     PLogObjectParent(mat,A);
752a30f8f8cSSatish Balay 
753a30f8f8cSSatish Balay     /* copy over the A part */
75465d70643SHong Zhang     Aloc  = (Mat_SeqSBAIJ*)baij->A->data;
755a30f8f8cSSatish Balay     ai    = Aloc->i; aj = Aloc->j; a = Aloc->a;
756a30f8f8cSSatish Balay     rvals = (int*)PetscMalloc(bs*sizeof(int));CHKPTRQ(rvals);
757a30f8f8cSSatish Balay 
758a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
759a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
760a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
761a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
762a30f8f8cSSatish Balay         col = (baij->cstart+aj[j])*bs;
763a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
764a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
765a30f8f8cSSatish Balay           col++; a += bs;
766a30f8f8cSSatish Balay         }
767a30f8f8cSSatish Balay       }
768a30f8f8cSSatish Balay     }
769a30f8f8cSSatish Balay     /* copy over the B part */
77065d70643SHong Zhang     Bloc = (Mat_SeqBAIJ*)baij->B->data;
77165d70643SHong Zhang     ai = Bloc->i; aj = Bloc->j; a = Bloc->a;
772a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
773a30f8f8cSSatish Balay       rvals[0] = bs*(baij->rstart + i);
774a30f8f8cSSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
775a30f8f8cSSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
776a30f8f8cSSatish Balay         col = baij->garray[aj[j]]*bs;
777a30f8f8cSSatish Balay         for (k=0; k<bs; k++) {
778a30f8f8cSSatish Balay           ierr = MatSetValues_MPISBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
779a30f8f8cSSatish Balay           col++; a += bs;
780a30f8f8cSSatish Balay         }
781a30f8f8cSSatish Balay       }
782a30f8f8cSSatish Balay     }
783a30f8f8cSSatish Balay     ierr = PetscFree(rvals);CHKERRQ(ierr);
784a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
785a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
786a30f8f8cSSatish Balay     /*
787a30f8f8cSSatish Balay        Everyone has to call to draw the matrix since the graphics waits are
788a30f8f8cSSatish Balay        synchronized across all processors that share the Draw object
789a30f8f8cSSatish Balay     */
790a30f8f8cSSatish Balay     ierr = ViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
79165d70643SHong Zhang     if (!rank) {
792a30f8f8cSSatish Balay       ierr = MatView(((Mat_MPISBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
793a30f8f8cSSatish Balay     }
79465d70643SHong Zhang     ierr = ViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
795a30f8f8cSSatish Balay     ierr = MatDestroy(A);CHKERRQ(ierr);
796a30f8f8cSSatish Balay   }
797a30f8f8cSSatish Balay   PetscFunctionReturn(0);
798a30f8f8cSSatish Balay }
799a30f8f8cSSatish Balay 
800a30f8f8cSSatish Balay #undef __FUNC__
801a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatView_MPISBAIJ"
802a30f8f8cSSatish Balay int MatView_MPISBAIJ(Mat mat,Viewer viewer)
803a30f8f8cSSatish Balay {
804a30f8f8cSSatish Balay   int        ierr;
805a30f8f8cSSatish Balay   PetscTruth isascii,isdraw,issocket,isbinary;
806a30f8f8cSSatish Balay 
807a30f8f8cSSatish Balay   PetscFunctionBegin;
808a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,ASCII_VIEWER,&isascii);CHKERRQ(ierr);
809a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,DRAW_VIEWER,&isdraw);CHKERRQ(ierr);
810a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,SOCKET_VIEWER,&issocket);CHKERRQ(ierr);
811a30f8f8cSSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,BINARY_VIEWER,&isbinary);CHKERRQ(ierr);
812a30f8f8cSSatish Balay   if (isascii || isdraw || issocket || isbinary) {
813a30f8f8cSSatish Balay     ierr = MatView_MPISBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
814a30f8f8cSSatish Balay   } else {
81529bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by MPISBAIJ matrices",((PetscObject)viewer)->type_name);
816a30f8f8cSSatish Balay   }
817a30f8f8cSSatish Balay   PetscFunctionReturn(0);
818a30f8f8cSSatish Balay }
819a30f8f8cSSatish Balay 
820a30f8f8cSSatish Balay #undef __FUNC__
821a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatDestroy_MPISBAIJ"
822a30f8f8cSSatish Balay int MatDestroy_MPISBAIJ(Mat mat)
823a30f8f8cSSatish Balay {
824a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
825a30f8f8cSSatish Balay   int         ierr;
826a30f8f8cSSatish Balay 
827a30f8f8cSSatish Balay   PetscFunctionBegin;
828a30f8f8cSSatish Balay 
829a30f8f8cSSatish Balay   if (mat->mapping) {
830a30f8f8cSSatish Balay     ierr = ISLocalToGlobalMappingDestroy(mat->mapping);CHKERRQ(ierr);
831a30f8f8cSSatish Balay   }
832a30f8f8cSSatish Balay   if (mat->bmapping) {
833a30f8f8cSSatish Balay     ierr = ISLocalToGlobalMappingDestroy(mat->bmapping);CHKERRQ(ierr);
834a30f8f8cSSatish Balay   }
835a30f8f8cSSatish Balay   if (mat->rmap) {
836a30f8f8cSSatish Balay     ierr = MapDestroy(mat->rmap);CHKERRQ(ierr);
837a30f8f8cSSatish Balay   }
838a30f8f8cSSatish Balay   if (mat->cmap) {
839a30f8f8cSSatish Balay     ierr = MapDestroy(mat->cmap);CHKERRQ(ierr);
840a30f8f8cSSatish Balay   }
841a30f8f8cSSatish Balay #if defined(PETSC_USE_LOG)
842b5df2d14SHong Zhang   PLogObjectState((PetscObject)mat,"Rows=%d,Cols=%d",mat->M,mat->N);
843a30f8f8cSSatish Balay #endif
844a30f8f8cSSatish Balay 
845a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
846a30f8f8cSSatish Balay   ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
847a30f8f8cSSatish Balay 
848a30f8f8cSSatish Balay   ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
849a30f8f8cSSatish Balay   ierr = MatDestroy(baij->A);CHKERRQ(ierr);
850a30f8f8cSSatish Balay   ierr = MatDestroy(baij->B);CHKERRQ(ierr);
851a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
852a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
853a30f8f8cSSatish Balay #else
854a30f8f8cSSatish Balay   if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
855a30f8f8cSSatish Balay #endif
856a30f8f8cSSatish Balay   if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
857a30f8f8cSSatish Balay   if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
858a30f8f8cSSatish Balay   if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
859a30f8f8cSSatish Balay   if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
860a30f8f8cSSatish Balay   if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
861a30f8f8cSSatish Balay   if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
862a30f8f8cSSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
863a30f8f8cSSatish Balay   if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
864a30f8f8cSSatish Balay #endif
865a30f8f8cSSatish Balay   ierr = PetscFree(baij);CHKERRQ(ierr);
866a30f8f8cSSatish Balay   PLogObjectDestroy(mat);
867a30f8f8cSSatish Balay   PetscHeaderDestroy(mat);
868a30f8f8cSSatish Balay   PetscFunctionReturn(0);
869a30f8f8cSSatish Balay }
870a30f8f8cSSatish Balay 
871a30f8f8cSSatish Balay #undef __FUNC__
872a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMult_MPISBAIJ"
873a30f8f8cSSatish Balay int MatMult_MPISBAIJ(Mat A,Vec xx,Vec yy)
874a30f8f8cSSatish Balay {
875a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
876a30f8f8cSSatish Balay   int         ierr,nt;
877a30f8f8cSSatish Balay 
878a30f8f8cSSatish Balay   PetscFunctionBegin;
879a30f8f8cSSatish Balay   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
880b5df2d14SHong Zhang   if (nt != A->n) {
88129bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
882a30f8f8cSSatish Balay   }
883a30f8f8cSSatish Balay   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
884b5df2d14SHong Zhang   if (nt != A->m) {
88529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
886a30f8f8cSSatish Balay   }
88765d70643SHong Zhang 
888b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
889b941877fSHong Zhang   /* do diagonal part */
890b941877fSHong Zhang   ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
891b941877fSHong Zhang   /* do supperdiagonal part */
892b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
893b941877fSHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
894b941877fSHong Zhang   /* do subdiagonal part */
895b941877fSHong Zhang   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
896b941877fSHong Zhang   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
897b941877fSHong Zhang   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
89865d70643SHong Zhang 
899a30f8f8cSSatish Balay   PetscFunctionReturn(0);
900a30f8f8cSSatish Balay }
901a30f8f8cSSatish Balay 
902a30f8f8cSSatish Balay #undef __FUNC__
903a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMultAdd_MPISBAIJ"
904a30f8f8cSSatish Balay int MatMultAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
905a30f8f8cSSatish Balay {
906de8b6608SHong Zhang   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
907aa482183SHong Zhang   int        ierr;
908a30f8f8cSSatish Balay 
909a30f8f8cSSatish Balay   PetscFunctionBegin;
910b941877fSHong Zhang   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
911b941877fSHong Zhang   /* do diagonal part */
912b941877fSHong Zhang   ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
913b941877fSHong Zhang   /* do supperdiagonal part */
914b941877fSHong Zhang   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
915de8b6608SHong Zhang   ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
916de8b6608SHong Zhang 
917b941877fSHong Zhang   /* do subdiagonal part */
918a30f8f8cSSatish Balay   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
919a30f8f8cSSatish Balay   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
920a30f8f8cSSatish Balay   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
921aa482183SHong Zhang 
922a30f8f8cSSatish Balay   PetscFunctionReturn(0);
923a30f8f8cSSatish Balay }
924a30f8f8cSSatish Balay 
925a30f8f8cSSatish Balay #undef __FUNC__
926a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMultTranspose_MPISBAIJ"
927a30f8f8cSSatish Balay int MatMultTranspose_MPISBAIJ(Mat A,Vec xx,Vec yy)
928a30f8f8cSSatish Balay {
929a30f8f8cSSatish Balay   PetscFunctionBegin;
93029bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMult().");
93196e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
932a30f8f8cSSatish Balay }
933a30f8f8cSSatish Balay 
934a30f8f8cSSatish Balay #undef __FUNC__
935a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMultTransposeAdd_MPISBAIJ"
936a30f8f8cSSatish Balay int MatMultTransposeAdd_MPISBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
937a30f8f8cSSatish Balay {
938a30f8f8cSSatish Balay   PetscFunctionBegin;
93929bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. Call MatMultAdd().");
94096e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
941a30f8f8cSSatish Balay }
942a30f8f8cSSatish Balay 
943a30f8f8cSSatish Balay /*
944a30f8f8cSSatish Balay   This only works correctly for square matrices where the subblock A->A is the
945a30f8f8cSSatish Balay    diagonal block
946a30f8f8cSSatish Balay */
947a30f8f8cSSatish Balay #undef __FUNC__
948a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetDiagonal_MPISBAIJ"
949a30f8f8cSSatish Balay int MatGetDiagonal_MPISBAIJ(Mat A,Vec v)
950a30f8f8cSSatish Balay {
951a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
952a30f8f8cSSatish Balay   int         ierr;
953a30f8f8cSSatish Balay 
954a30f8f8cSSatish Balay   PetscFunctionBegin;
95529bbc08cSBarry Smith   /* if (a->M != a->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block"); */
956a30f8f8cSSatish Balay   ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
957a30f8f8cSSatish Balay   PetscFunctionReturn(0);
958a30f8f8cSSatish Balay }
959a30f8f8cSSatish Balay 
960a30f8f8cSSatish Balay #undef __FUNC__
961a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatScale_MPISBAIJ"
962a30f8f8cSSatish Balay int MatScale_MPISBAIJ(Scalar *aa,Mat A)
963a30f8f8cSSatish Balay {
964a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
965a30f8f8cSSatish Balay   int         ierr;
966a30f8f8cSSatish Balay 
967a30f8f8cSSatish Balay   PetscFunctionBegin;
968a30f8f8cSSatish Balay   ierr = MatScale(aa,a->A);CHKERRQ(ierr);
969a30f8f8cSSatish Balay   ierr = MatScale(aa,a->B);CHKERRQ(ierr);
970a30f8f8cSSatish Balay   PetscFunctionReturn(0);
971a30f8f8cSSatish Balay }
972a30f8f8cSSatish Balay 
973a30f8f8cSSatish Balay #undef __FUNC__
974a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetOwnershipRange_MPISBAIJ"
975a30f8f8cSSatish Balay int MatGetOwnershipRange_MPISBAIJ(Mat matin,int *m,int *n)
976a30f8f8cSSatish Balay {
977a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
978a30f8f8cSSatish Balay 
979a30f8f8cSSatish Balay   PetscFunctionBegin;
980a30f8f8cSSatish Balay   if (m) *m = mat->rstart*mat->bs;
981a30f8f8cSSatish Balay   if (n) *n = mat->rend*mat->bs;
982a30f8f8cSSatish Balay   PetscFunctionReturn(0);
983a30f8f8cSSatish Balay }
984a30f8f8cSSatish Balay 
985a30f8f8cSSatish Balay #undef __FUNC__
986a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetRow_MPISBAIJ"
987a30f8f8cSSatish Balay int MatGetRow_MPISBAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
988a30f8f8cSSatish Balay {
989a30f8f8cSSatish Balay   Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)matin->data;
990a30f8f8cSSatish Balay   Scalar     *vworkA,*vworkB,**pvA,**pvB,*v_p;
991a30f8f8cSSatish Balay   int        bs = mat->bs,bs2 = mat->bs2,i,ierr,*cworkA,*cworkB,**pcA,**pcB;
992a30f8f8cSSatish Balay   int        nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
993a30f8f8cSSatish Balay   int        *cmap,*idx_p,cstart = mat->cstart;
994a30f8f8cSSatish Balay 
995a30f8f8cSSatish Balay   PetscFunctionBegin;
99629bbc08cSBarry Smith   if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
997a30f8f8cSSatish Balay   mat->getrowactive = PETSC_TRUE;
998a30f8f8cSSatish Balay 
999a30f8f8cSSatish Balay   if (!mat->rowvalues && (idx || v)) {
1000a30f8f8cSSatish Balay     /*
1001a30f8f8cSSatish Balay         allocate enough space to hold information from the longest row.
1002a30f8f8cSSatish Balay     */
1003a30f8f8cSSatish Balay     Mat_SeqSBAIJ *Aa = (Mat_SeqSBAIJ*)mat->A->data;
1004a30f8f8cSSatish Balay     Mat_SeqBAIJ  *Ba = (Mat_SeqBAIJ*)mat->B->data;
1005a30f8f8cSSatish Balay     int     max = 1,mbs = mat->mbs,tmp;
1006a30f8f8cSSatish Balay     for (i=0; i<mbs; i++) {
1007a30f8f8cSSatish Balay       tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i]; /* row length */
1008a30f8f8cSSatish Balay       if (max < tmp) { max = tmp; }
1009a30f8f8cSSatish Balay     }
1010a30f8f8cSSatish Balay     mat->rowvalues = (Scalar*)PetscMalloc(max*bs2*(sizeof(int)+sizeof(Scalar)));CHKPTRQ(mat->rowvalues);
1011a30f8f8cSSatish Balay     mat->rowindices = (int*)(mat->rowvalues + max*bs2);
1012a30f8f8cSSatish Balay   }
1013a30f8f8cSSatish Balay 
101429bbc08cSBarry Smith   if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
1015a30f8f8cSSatish Balay   lrow = row - brstart;  /* local row index */
1016a30f8f8cSSatish Balay 
1017a30f8f8cSSatish Balay   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1018a30f8f8cSSatish Balay   if (!v)   {pvA = 0; pvB = 0;}
1019a30f8f8cSSatish Balay   if (!idx) {pcA = 0; if (!v) pcB = 0;}
1020a30f8f8cSSatish Balay   ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1021a30f8f8cSSatish Balay   ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1022a30f8f8cSSatish Balay   nztot = nzA + nzB;
1023a30f8f8cSSatish Balay 
1024a30f8f8cSSatish Balay   cmap  = mat->garray;
1025a30f8f8cSSatish Balay   if (v  || idx) {
1026a30f8f8cSSatish Balay     if (nztot) {
1027a30f8f8cSSatish Balay       /* Sort by increasing column numbers, assuming A and B already sorted */
1028a30f8f8cSSatish Balay       int imark = -1;
1029a30f8f8cSSatish Balay       if (v) {
1030a30f8f8cSSatish Balay         *v = v_p = mat->rowvalues;
1031a30f8f8cSSatish Balay         for (i=0; i<nzB; i++) {
1032a30f8f8cSSatish Balay           if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
1033a30f8f8cSSatish Balay           else break;
1034a30f8f8cSSatish Balay         }
1035a30f8f8cSSatish Balay         imark = i;
1036a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
1037a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
1038a30f8f8cSSatish Balay       }
1039a30f8f8cSSatish Balay       if (idx) {
1040a30f8f8cSSatish Balay         *idx = idx_p = mat->rowindices;
1041a30f8f8cSSatish Balay         if (imark > -1) {
1042a30f8f8cSSatish Balay           for (i=0; i<imark; i++) {
1043a30f8f8cSSatish Balay             idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
1044a30f8f8cSSatish Balay           }
1045a30f8f8cSSatish Balay         } else {
1046a30f8f8cSSatish Balay           for (i=0; i<nzB; i++) {
1047a30f8f8cSSatish Balay             if (cmap[cworkB[i]/bs] < cstart)
1048a30f8f8cSSatish Balay               idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1049a30f8f8cSSatish Balay             else break;
1050a30f8f8cSSatish Balay           }
1051a30f8f8cSSatish Balay           imark = i;
1052a30f8f8cSSatish Balay         }
1053a30f8f8cSSatish Balay         for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
1054a30f8f8cSSatish Balay         for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1055a30f8f8cSSatish Balay       }
1056a30f8f8cSSatish Balay     } else {
1057a30f8f8cSSatish Balay       if (idx) *idx = 0;
1058a30f8f8cSSatish Balay       if (v)   *v   = 0;
1059a30f8f8cSSatish Balay     }
1060a30f8f8cSSatish Balay   }
1061a30f8f8cSSatish Balay   *nz = nztot;
1062a30f8f8cSSatish Balay   ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1063a30f8f8cSSatish Balay   ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1064a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1065a30f8f8cSSatish Balay }
1066a30f8f8cSSatish Balay 
1067a30f8f8cSSatish Balay #undef __FUNC__
1068a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatRestoreRow_MPISBAIJ"
1069a30f8f8cSSatish Balay int MatRestoreRow_MPISBAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
1070a30f8f8cSSatish Balay {
1071a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1072a30f8f8cSSatish Balay 
1073a30f8f8cSSatish Balay   PetscFunctionBegin;
1074a30f8f8cSSatish Balay   if (baij->getrowactive == PETSC_FALSE) {
107529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
1076a30f8f8cSSatish Balay   }
1077a30f8f8cSSatish Balay   baij->getrowactive = PETSC_FALSE;
1078a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1079a30f8f8cSSatish Balay }
1080a30f8f8cSSatish Balay 
1081a30f8f8cSSatish Balay #undef __FUNC__
1082a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetBlockSize_MPISBAIJ"
1083a30f8f8cSSatish Balay int MatGetBlockSize_MPISBAIJ(Mat mat,int *bs)
1084a30f8f8cSSatish Balay {
1085a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1086a30f8f8cSSatish Balay 
1087a30f8f8cSSatish Balay   PetscFunctionBegin;
1088a30f8f8cSSatish Balay   *bs = baij->bs;
1089a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1090a30f8f8cSSatish Balay }
1091a30f8f8cSSatish Balay 
1092a30f8f8cSSatish Balay #undef __FUNC__
1093a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatZeroEntries_MPISBAIJ"
1094a30f8f8cSSatish Balay int MatZeroEntries_MPISBAIJ(Mat A)
1095a30f8f8cSSatish Balay {
1096a30f8f8cSSatish Balay   Mat_MPISBAIJ *l = (Mat_MPISBAIJ*)A->data;
1097a30f8f8cSSatish Balay   int         ierr;
1098a30f8f8cSSatish Balay 
1099a30f8f8cSSatish Balay   PetscFunctionBegin;
1100a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
1101a30f8f8cSSatish Balay   ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
1102a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1103a30f8f8cSSatish Balay }
1104a30f8f8cSSatish Balay 
1105a30f8f8cSSatish Balay #undef __FUNC__
1106a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetInfo_MPISBAIJ"
1107a30f8f8cSSatish Balay int MatGetInfo_MPISBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
1108a30f8f8cSSatish Balay {
1109a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)matin->data;
1110a30f8f8cSSatish Balay   Mat         A = a->A,B = a->B;
1111a30f8f8cSSatish Balay   int         ierr;
1112a30f8f8cSSatish Balay   PetscReal   isend[5],irecv[5];
1113a30f8f8cSSatish Balay 
1114a30f8f8cSSatish Balay   PetscFunctionBegin;
1115a30f8f8cSSatish Balay   info->block_size     = (double)a->bs;
1116a30f8f8cSSatish Balay   ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
1117a30f8f8cSSatish Balay   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
1118a30f8f8cSSatish Balay   isend[3] = info->memory;  isend[4] = info->mallocs;
1119a30f8f8cSSatish Balay   ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
1120a30f8f8cSSatish Balay   isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
1121a30f8f8cSSatish Balay   isend[3] += info->memory;  isend[4] += info->mallocs;
1122a30f8f8cSSatish Balay   if (flag == MAT_LOCAL) {
1123a30f8f8cSSatish Balay     info->nz_used      = isend[0];
1124a30f8f8cSSatish Balay     info->nz_allocated = isend[1];
1125a30f8f8cSSatish Balay     info->nz_unneeded  = isend[2];
1126a30f8f8cSSatish Balay     info->memory       = isend[3];
1127a30f8f8cSSatish Balay     info->mallocs      = isend[4];
1128a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_MAX) {
1129a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_MAX,matin->comm);CHKERRQ(ierr);
1130a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1131a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1132a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1133a30f8f8cSSatish Balay     info->memory       = irecv[3];
1134a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1135a30f8f8cSSatish Balay   } else if (flag == MAT_GLOBAL_SUM) {
1136a30f8f8cSSatish Balay     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_SUM,matin->comm);CHKERRQ(ierr);
1137a30f8f8cSSatish Balay     info->nz_used      = irecv[0];
1138a30f8f8cSSatish Balay     info->nz_allocated = irecv[1];
1139a30f8f8cSSatish Balay     info->nz_unneeded  = irecv[2];
1140a30f8f8cSSatish Balay     info->memory       = irecv[3];
1141a30f8f8cSSatish Balay     info->mallocs      = irecv[4];
1142a30f8f8cSSatish Balay   } else {
114329bbc08cSBarry Smith     SETERRQ1(1,"Unknown MatInfoType argument %d",flag);
1144a30f8f8cSSatish Balay   }
1145b5df2d14SHong Zhang   info->rows_global       = (double)A->M;
1146b5df2d14SHong Zhang   info->columns_global    = (double)A->N;
1147b5df2d14SHong Zhang   info->rows_local        = (double)A->m;
1148b5df2d14SHong Zhang   info->columns_local     = (double)A->N;
1149a30f8f8cSSatish Balay   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
1150a30f8f8cSSatish Balay   info->fill_ratio_needed = 0;
1151a30f8f8cSSatish Balay   info->factor_mallocs    = 0;
1152a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1153a30f8f8cSSatish Balay }
1154a30f8f8cSSatish Balay 
1155a30f8f8cSSatish Balay #undef __FUNC__
1156a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatSetOption_MPISBAIJ"
1157a30f8f8cSSatish Balay int MatSetOption_MPISBAIJ(Mat A,MatOption op)
1158a30f8f8cSSatish Balay {
1159a30f8f8cSSatish Balay   Mat_MPISBAIJ *a = (Mat_MPISBAIJ*)A->data;
1160a30f8f8cSSatish Balay   int         ierr;
1161a30f8f8cSSatish Balay 
1162a30f8f8cSSatish Balay   PetscFunctionBegin;
1163a30f8f8cSSatish Balay   if (op == MAT_NO_NEW_NONZERO_LOCATIONS ||
1164a30f8f8cSSatish Balay       op == MAT_YES_NEW_NONZERO_LOCATIONS ||
1165a30f8f8cSSatish Balay       op == MAT_COLUMNS_UNSORTED ||
1166a30f8f8cSSatish Balay       op == MAT_COLUMNS_SORTED ||
1167a30f8f8cSSatish Balay       op == MAT_NEW_NONZERO_ALLOCATION_ERR ||
1168a30f8f8cSSatish Balay       op == MAT_KEEP_ZEROED_ROWS ||
1169a30f8f8cSSatish Balay       op == MAT_NEW_NONZERO_LOCATION_ERR) {
1170a30f8f8cSSatish Balay         ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1171a30f8f8cSSatish Balay         ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1172a30f8f8cSSatish Balay   } else if (op == MAT_ROW_ORIENTED) {
1173a30f8f8cSSatish Balay         a->roworiented = PETSC_TRUE;
1174a30f8f8cSSatish Balay         ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1175a30f8f8cSSatish Balay         ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1176a30f8f8cSSatish Balay   } else if (op == MAT_ROWS_SORTED ||
1177a30f8f8cSSatish Balay              op == MAT_ROWS_UNSORTED ||
1178a30f8f8cSSatish Balay              op == MAT_SYMMETRIC ||
1179a30f8f8cSSatish Balay              op == MAT_STRUCTURALLY_SYMMETRIC ||
1180a30f8f8cSSatish Balay              op == MAT_YES_NEW_DIAGONALS ||
1181a30f8f8cSSatish Balay              op == MAT_USE_HASH_TABLE) {
1182a30f8f8cSSatish Balay     PLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
1183a30f8f8cSSatish Balay   } else if (op == MAT_COLUMN_ORIENTED) {
1184a30f8f8cSSatish Balay     a->roworiented = PETSC_FALSE;
1185a30f8f8cSSatish Balay     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
1186a30f8f8cSSatish Balay     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
1187a30f8f8cSSatish Balay   } else if (op == MAT_IGNORE_OFF_PROC_ENTRIES) {
1188a30f8f8cSSatish Balay     a->donotstash = PETSC_TRUE;
1189a30f8f8cSSatish Balay   } else if (op == MAT_NO_NEW_DIAGONALS) {
119029bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
1191a30f8f8cSSatish Balay   } else if (op == MAT_USE_HASH_TABLE) {
1192a30f8f8cSSatish Balay     a->ht_flag = PETSC_TRUE;
1193a30f8f8cSSatish Balay   } else {
119429bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"unknown option");
1195a30f8f8cSSatish Balay   }
1196a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1197a30f8f8cSSatish Balay }
1198a30f8f8cSSatish Balay 
1199a30f8f8cSSatish Balay #undef __FUNC__
1200a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatTranspose_MPISBAIJ("
1201a30f8f8cSSatish Balay int MatTranspose_MPISBAIJ(Mat A,Mat *matout)
1202a30f8f8cSSatish Balay {
1203a30f8f8cSSatish Balay   PetscFunctionBegin;
120429bbc08cSBarry Smith   SETERRQ(1,"Matrix is symmetric. MatTranspose() should not be called");
120596e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
1206a30f8f8cSSatish Balay }
1207a30f8f8cSSatish Balay 
1208a30f8f8cSSatish Balay #undef __FUNC__
1209a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatDiagonalScale_MPISBAIJ"
1210a30f8f8cSSatish Balay int MatDiagonalScale_MPISBAIJ(Mat mat,Vec ll,Vec rr)
1211a30f8f8cSSatish Balay {
1212a30f8f8cSSatish Balay   Mat_MPISBAIJ *baij = (Mat_MPISBAIJ*)mat->data;
1213a30f8f8cSSatish Balay   Mat         a = baij->A,b = baij->B;
1214a30f8f8cSSatish Balay   int         ierr,s1,s2,s3;
1215a30f8f8cSSatish Balay 
1216a30f8f8cSSatish Balay   PetscFunctionBegin;
1217a30f8f8cSSatish Balay   if (ll != rr) {
121829bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n");
1219a30f8f8cSSatish Balay   }
1220a30f8f8cSSatish Balay   ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
1221a30f8f8cSSatish Balay   if (rr) {
1222a30f8f8cSSatish Balay     ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
122329bbc08cSBarry Smith     if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
1224a30f8f8cSSatish Balay     /* Overlap communication with computation. */
1225a30f8f8cSSatish Balay     ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1226a30f8f8cSSatish Balay     /*} if (ll) { */
1227a30f8f8cSSatish Balay     ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
122829bbc08cSBarry Smith     if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
1229a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
1230a30f8f8cSSatish Balay     /* } */
1231a30f8f8cSSatish Balay   /* scale  the diagonal block */
1232a30f8f8cSSatish Balay   ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);
1233a30f8f8cSSatish Balay 
1234a30f8f8cSSatish Balay   /* if (rr) { */
1235a30f8f8cSSatish Balay     /* Do a scatter end and then right scale the off-diagonal block */
1236a30f8f8cSSatish Balay     ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1237a30f8f8cSSatish Balay     ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
1238a30f8f8cSSatish Balay   }
1239a30f8f8cSSatish Balay 
1240a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1241a30f8f8cSSatish Balay }
1242a30f8f8cSSatish Balay 
1243a30f8f8cSSatish Balay #undef __FUNC__
1244a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatZeroRows_MPISBAIJ"
1245a30f8f8cSSatish Balay int MatZeroRows_MPISBAIJ(Mat A,IS is,Scalar *diag)
1246a30f8f8cSSatish Balay {
1247a30f8f8cSSatish Balay   Mat_MPISBAIJ   *l = (Mat_MPISBAIJ*)A->data;
1248a30f8f8cSSatish Balay   int            i,ierr,N,*rows,*owners = l->rowners,size = l->size;
1249a30f8f8cSSatish Balay   int            *procs,*nprocs,j,found,idx,nsends,*work,row;
1250a30f8f8cSSatish Balay   int            nmax,*svalues,*starts,*owner,nrecvs,rank = l->rank;
1251a30f8f8cSSatish Balay   int            *rvalues,tag = A->tag,count,base,slen,n,*source;
1252a30f8f8cSSatish Balay   int            *lens,imdex,*lrows,*values,bs=l->bs,rstart_bs=l->rstart_bs;
1253a30f8f8cSSatish Balay   MPI_Comm       comm = A->comm;
1254a30f8f8cSSatish Balay   MPI_Request    *send_waits,*recv_waits;
1255a30f8f8cSSatish Balay   MPI_Status     recv_status,*send_status;
1256a30f8f8cSSatish Balay   IS             istmp;
1257a30f8f8cSSatish Balay 
1258a30f8f8cSSatish Balay   PetscFunctionBegin;
1259a30f8f8cSSatish Balay   ierr = ISGetSize(is,&N);CHKERRQ(ierr);
1260a30f8f8cSSatish Balay   ierr = ISGetIndices(is,&rows);CHKERRQ(ierr);
1261a30f8f8cSSatish Balay 
1262a30f8f8cSSatish Balay   /*  first count number of contributors to each processor */
1263a30f8f8cSSatish Balay   nprocs = (int*)PetscMalloc(2*size*sizeof(int));CHKPTRQ(nprocs);
1264a30f8f8cSSatish Balay   ierr   = PetscMemzero(nprocs,2*size*sizeof(int));CHKERRQ(ierr);
1265a30f8f8cSSatish Balay   procs  = nprocs + size;
1266a30f8f8cSSatish Balay   owner  = (int*)PetscMalloc((N+1)*sizeof(int));CHKPTRQ(owner); /* see note*/
1267a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1268a30f8f8cSSatish Balay     idx   = rows[i];
1269a30f8f8cSSatish Balay     found = 0;
1270a30f8f8cSSatish Balay     for (j=0; j<size; j++) {
1271a30f8f8cSSatish Balay       if (idx >= owners[j]*bs && idx < owners[j+1]*bs) {
1272a30f8f8cSSatish Balay         nprocs[j]++; procs[j] = 1; owner[i] = j; found = 1; break;
1273a30f8f8cSSatish Balay       }
1274a30f8f8cSSatish Balay     }
127529bbc08cSBarry Smith     if (!found) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
1276a30f8f8cSSatish Balay   }
1277a30f8f8cSSatish Balay   nsends = 0;  for (i=0; i<size; i++) { nsends += procs[i];}
1278a30f8f8cSSatish Balay 
1279a30f8f8cSSatish Balay   /* inform other processors of number of messages and max length*/
1280a30f8f8cSSatish Balay   work   = (int*)PetscMalloc(2*size*sizeof(int));CHKPTRQ(work);
1281a30f8f8cSSatish Balay   ierr   = MPI_Allreduce(nprocs,work,2*size,MPI_INT,PetscMaxSum_Op,comm);CHKERRQ(ierr);
1282a30f8f8cSSatish Balay   nmax   = work[rank];
1283a30f8f8cSSatish Balay   nrecvs = work[size+rank];
1284a30f8f8cSSatish Balay   ierr = PetscFree(work);CHKERRQ(ierr);
1285a30f8f8cSSatish Balay 
1286a30f8f8cSSatish Balay   /* post receives:   */
1287a30f8f8cSSatish Balay   rvalues = (int*)PetscMalloc((nrecvs+1)*(nmax+1)*sizeof(int));CHKPTRQ(rvalues);
1288a30f8f8cSSatish Balay   recv_waits = (MPI_Request*)PetscMalloc((nrecvs+1)*sizeof(MPI_Request));CHKPTRQ(recv_waits);
1289a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1290a30f8f8cSSatish Balay     ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPI_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
1291a30f8f8cSSatish Balay   }
1292a30f8f8cSSatish Balay 
1293a30f8f8cSSatish Balay   /* do sends:
1294a30f8f8cSSatish Balay      1) starts[i] gives the starting index in svalues for stuff going to
1295a30f8f8cSSatish Balay      the ith processor
1296a30f8f8cSSatish Balay   */
1297a30f8f8cSSatish Balay   svalues    = (int*)PetscMalloc((N+1)*sizeof(int));CHKPTRQ(svalues);
1298a30f8f8cSSatish Balay   send_waits = (MPI_Request*)PetscMalloc((nsends+1)*sizeof(MPI_Request));CHKPTRQ(send_waits);
1299a30f8f8cSSatish Balay   starts     = (int*)PetscMalloc((size+1)*sizeof(int));CHKPTRQ(starts);
1300a30f8f8cSSatish Balay   starts[0]  = 0;
1301a30f8f8cSSatish Balay   for (i=1; i<size; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1302a30f8f8cSSatish Balay   for (i=0; i<N; i++) {
1303a30f8f8cSSatish Balay     svalues[starts[owner[i]]++] = rows[i];
1304a30f8f8cSSatish Balay   }
1305a30f8f8cSSatish Balay   ierr = ISRestoreIndices(is,&rows);CHKERRQ(ierr);
1306a30f8f8cSSatish Balay 
1307a30f8f8cSSatish Balay   starts[0] = 0;
1308a30f8f8cSSatish Balay   for (i=1; i<size+1; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
1309a30f8f8cSSatish Balay   count = 0;
1310a30f8f8cSSatish Balay   for (i=0; i<size; i++) {
1311a30f8f8cSSatish Balay     if (procs[i]) {
1312a30f8f8cSSatish Balay       ierr = MPI_Isend(svalues+starts[i],nprocs[i],MPI_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
1313a30f8f8cSSatish Balay     }
1314a30f8f8cSSatish Balay   }
1315a30f8f8cSSatish Balay   ierr = PetscFree(starts);CHKERRQ(ierr);
1316a30f8f8cSSatish Balay 
1317a30f8f8cSSatish Balay   base = owners[rank]*bs;
1318a30f8f8cSSatish Balay 
1319a30f8f8cSSatish Balay   /*  wait on receives */
1320a30f8f8cSSatish Balay   lens   = (int*)PetscMalloc(2*(nrecvs+1)*sizeof(int));CHKPTRQ(lens);
1321a30f8f8cSSatish Balay   source = lens + nrecvs;
1322a30f8f8cSSatish Balay   count  = nrecvs; slen = 0;
1323a30f8f8cSSatish Balay   while (count) {
1324a30f8f8cSSatish Balay     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
1325a30f8f8cSSatish Balay     /* unpack receives into our local space */
1326a30f8f8cSSatish Balay     ierr = MPI_Get_count(&recv_status,MPI_INT,&n);CHKERRQ(ierr);
1327a30f8f8cSSatish Balay     source[imdex]  = recv_status.MPI_SOURCE;
1328a30f8f8cSSatish Balay     lens[imdex]    = n;
1329a30f8f8cSSatish Balay     slen          += n;
1330a30f8f8cSSatish Balay     count--;
1331a30f8f8cSSatish Balay   }
1332a30f8f8cSSatish Balay   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
1333a30f8f8cSSatish Balay 
1334a30f8f8cSSatish Balay   /* move the data into the send scatter */
1335a30f8f8cSSatish Balay   lrows = (int*)PetscMalloc((slen+1)*sizeof(int));CHKPTRQ(lrows);
1336a30f8f8cSSatish Balay   count = 0;
1337a30f8f8cSSatish Balay   for (i=0; i<nrecvs; i++) {
1338a30f8f8cSSatish Balay     values = rvalues + i*nmax;
1339a30f8f8cSSatish Balay     for (j=0; j<lens[i]; j++) {
1340a30f8f8cSSatish Balay       lrows[count++] = values[j] - base;
1341a30f8f8cSSatish Balay     }
1342a30f8f8cSSatish Balay   }
1343a30f8f8cSSatish Balay   ierr = PetscFree(rvalues);CHKERRQ(ierr);
1344a30f8f8cSSatish Balay   ierr = PetscFree(lens);CHKERRQ(ierr);
1345a30f8f8cSSatish Balay   ierr = PetscFree(owner);CHKERRQ(ierr);
1346a30f8f8cSSatish Balay   ierr = PetscFree(nprocs);CHKERRQ(ierr);
1347a30f8f8cSSatish Balay 
1348a30f8f8cSSatish Balay   /* actually zap the local rows */
1349a30f8f8cSSatish Balay   ierr = ISCreateGeneral(PETSC_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
1350a30f8f8cSSatish Balay   PLogObjectParent(A,istmp);
1351a30f8f8cSSatish Balay 
1352a30f8f8cSSatish Balay   /*
1353a30f8f8cSSatish Balay         Zero the required rows. If the "diagonal block" of the matrix
1354a30f8f8cSSatish Balay      is square and the user wishes to set the diagonal we use seperate
1355a30f8f8cSSatish Balay      code so that MatSetValues() is not called for each diagonal allocating
1356a30f8f8cSSatish Balay      new memory, thus calling lots of mallocs and slowing things down.
1357a30f8f8cSSatish Balay 
1358a30f8f8cSSatish Balay        Contributed by: Mathew Knepley
1359a30f8f8cSSatish Balay   */
1360a30f8f8cSSatish Balay   /* must zero l->B before l->A because the (diag) case below may put values into l->B*/
1361ff64ff16SBarry Smith   ierr = MatZeroRows_SeqBAIJ(l->B,istmp,0);CHKERRQ(ierr);
1362a30f8f8cSSatish Balay   if (diag && (l->A->M == l->A->N)) {
1363a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,diag);CHKERRQ(ierr);
1364a30f8f8cSSatish Balay   } else if (diag) {
1365a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1366a30f8f8cSSatish Balay     if (((Mat_SeqSBAIJ*)l->A->data)->nonew) {
136729bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\
1368a30f8f8cSSatish Balay MAT_NO_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR");
1369a30f8f8cSSatish Balay     }
1370a30f8f8cSSatish Balay     for (i=0; i<slen; i++) {
1371a30f8f8cSSatish Balay       row  = lrows[i] + rstart_bs;
1372a30f8f8cSSatish Balay       ierr = MatSetValues(A,1,&row,1,&row,diag,INSERT_VALUES);CHKERRQ(ierr);
1373a30f8f8cSSatish Balay     }
1374a30f8f8cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1375a30f8f8cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1376a30f8f8cSSatish Balay   } else {
1377a30f8f8cSSatish Balay     ierr = MatZeroRows_SeqSBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1378a30f8f8cSSatish Balay   }
1379a30f8f8cSSatish Balay 
1380a30f8f8cSSatish Balay   ierr = ISDestroy(istmp);CHKERRQ(ierr);
1381a30f8f8cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
1382a30f8f8cSSatish Balay 
1383a30f8f8cSSatish Balay   /* wait on sends */
1384a30f8f8cSSatish Balay   if (nsends) {
1385a30f8f8cSSatish Balay     send_status = (MPI_Status*)PetscMalloc(nsends*sizeof(MPI_Status));CHKPTRQ(send_status);
1386a30f8f8cSSatish Balay     ierr        = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
1387a30f8f8cSSatish Balay     ierr        = PetscFree(send_status);CHKERRQ(ierr);
1388a30f8f8cSSatish Balay   }
1389a30f8f8cSSatish Balay   ierr = PetscFree(send_waits);CHKERRQ(ierr);
1390a30f8f8cSSatish Balay   ierr = PetscFree(svalues);CHKERRQ(ierr);
1391a30f8f8cSSatish Balay 
1392a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1393a30f8f8cSSatish Balay }
1394a30f8f8cSSatish Balay 
1395a30f8f8cSSatish Balay #undef __FUNC__
1396a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatPrintHelp_MPISBAIJ"
1397a30f8f8cSSatish Balay int MatPrintHelp_MPISBAIJ(Mat A)
1398a30f8f8cSSatish Balay {
1399a30f8f8cSSatish Balay   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1400a30f8f8cSSatish Balay   MPI_Comm    comm = A->comm;
1401a30f8f8cSSatish Balay   static int  called = 0;
1402a30f8f8cSSatish Balay   int         ierr;
1403a30f8f8cSSatish Balay 
1404a30f8f8cSSatish Balay   PetscFunctionBegin;
1405a30f8f8cSSatish Balay   if (!a->rank) {
1406a30f8f8cSSatish Balay     ierr = MatPrintHelp_SeqSBAIJ(a->A);CHKERRQ(ierr);
1407a30f8f8cSSatish Balay   }
1408a30f8f8cSSatish Balay   if (called) {PetscFunctionReturn(0);} else called = 1;
1409a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm," Options for MATMPISBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
1410a30f8f8cSSatish Balay   ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
1411a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1412a30f8f8cSSatish Balay }
1413a30f8f8cSSatish Balay 
1414a30f8f8cSSatish Balay #undef __FUNC__
1415a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatSetUnfactored_MPISBAIJ"
1416a30f8f8cSSatish Balay int MatSetUnfactored_MPISBAIJ(Mat A)
1417a30f8f8cSSatish Balay {
1418f3566a2aSHong Zhang   Mat_MPISBAIJ *a   = (Mat_MPISBAIJ*)A->data;
1419a30f8f8cSSatish Balay   int         ierr;
1420a30f8f8cSSatish Balay 
1421a30f8f8cSSatish Balay   PetscFunctionBegin;
1422a30f8f8cSSatish Balay   ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
1423a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1424a30f8f8cSSatish Balay }
1425a30f8f8cSSatish Balay 
1426a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat,MatDuplicateOption,Mat *);
1427a30f8f8cSSatish Balay 
1428a30f8f8cSSatish Balay #undef __FUNC__
1429a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatEqual_MPISBAIJ"
1430a30f8f8cSSatish Balay int MatEqual_MPISBAIJ(Mat A,Mat B,PetscTruth *flag)
1431a30f8f8cSSatish Balay {
1432a30f8f8cSSatish Balay   Mat_MPISBAIJ *matB = (Mat_MPISBAIJ*)B->data,*matA = (Mat_MPISBAIJ*)A->data;
1433a30f8f8cSSatish Balay   Mat         a,b,c,d;
1434a30f8f8cSSatish Balay   PetscTruth  flg;
1435a30f8f8cSSatish Balay   int         ierr;
1436a30f8f8cSSatish Balay 
1437a30f8f8cSSatish Balay   PetscFunctionBegin;
1438b5df2d14SHong Zhang   ierr = PetscTypeCompare((PetscObject)B,MATMPISBAIJ,&flg);CHKERRQ(ierr);
1439b5df2d14SHong Zhang   if (!flg) SETERRQ(PETSC_ERR_ARG_INCOMP,"Matrices must be same type");
1440a30f8f8cSSatish Balay   a = matA->A; b = matA->B;
1441a30f8f8cSSatish Balay   c = matB->A; d = matB->B;
1442a30f8f8cSSatish Balay 
1443a30f8f8cSSatish Balay   ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
1444a30f8f8cSSatish Balay   if (flg == PETSC_TRUE) {
1445a30f8f8cSSatish Balay     ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
1446a30f8f8cSSatish Balay   }
1447a30f8f8cSSatish Balay   ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
1448a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1449a30f8f8cSSatish Balay }
1450a30f8f8cSSatish Balay 
1451a30f8f8cSSatish Balay /* -------------------------------------------------------------------*/
1452a30f8f8cSSatish Balay static struct _MatOps MatOps_Values = {
1453a30f8f8cSSatish Balay   MatSetValues_MPISBAIJ,
1454a30f8f8cSSatish Balay   MatGetRow_MPISBAIJ,
1455a30f8f8cSSatish Balay   MatRestoreRow_MPISBAIJ,
1456a30f8f8cSSatish Balay   MatMult_MPISBAIJ,
1457a30f8f8cSSatish Balay   MatMultAdd_MPISBAIJ,
1458a30f8f8cSSatish Balay   MatMultTranspose_MPISBAIJ,
1459a30f8f8cSSatish Balay   MatMultTransposeAdd_MPISBAIJ,
1460a30f8f8cSSatish Balay   0,
1461a30f8f8cSSatish Balay   0,
1462a30f8f8cSSatish Balay   0,
1463a30f8f8cSSatish Balay   0,
1464a30f8f8cSSatish Balay   0,
1465a30f8f8cSSatish Balay   0,
1466a30f8f8cSSatish Balay   0,
1467a30f8f8cSSatish Balay   MatTranspose_MPISBAIJ,
1468a30f8f8cSSatish Balay   MatGetInfo_MPISBAIJ,
1469a30f8f8cSSatish Balay   MatEqual_MPISBAIJ,
1470a30f8f8cSSatish Balay   MatGetDiagonal_MPISBAIJ,
1471a30f8f8cSSatish Balay   MatDiagonalScale_MPISBAIJ,
1472a30f8f8cSSatish Balay   MatNorm_MPISBAIJ,
1473a30f8f8cSSatish Balay   MatAssemblyBegin_MPISBAIJ,
1474a30f8f8cSSatish Balay   MatAssemblyEnd_MPISBAIJ,
1475a30f8f8cSSatish Balay   0,
1476a30f8f8cSSatish Balay   MatSetOption_MPISBAIJ,
1477a30f8f8cSSatish Balay   MatZeroEntries_MPISBAIJ,
1478a30f8f8cSSatish Balay   MatZeroRows_MPISBAIJ,
1479a30f8f8cSSatish Balay   0,
1480a30f8f8cSSatish Balay   0,
1481a30f8f8cSSatish Balay   0,
1482a30f8f8cSSatish Balay   0,
1483b5df2d14SHong Zhang   0,
1484b5df2d14SHong Zhang   0,
1485a30f8f8cSSatish Balay   MatGetOwnershipRange_MPISBAIJ,
1486a30f8f8cSSatish Balay   0,
1487a30f8f8cSSatish Balay   0,
1488a30f8f8cSSatish Balay   0,
1489a30f8f8cSSatish Balay   0,
1490a30f8f8cSSatish Balay   MatDuplicate_MPISBAIJ,
1491a30f8f8cSSatish Balay   0,
1492a30f8f8cSSatish Balay   0,
1493a30f8f8cSSatish Balay   0,
1494a30f8f8cSSatish Balay   0,
1495a30f8f8cSSatish Balay   0,
1496a30f8f8cSSatish Balay   MatGetSubMatrices_MPISBAIJ,
1497a30f8f8cSSatish Balay   MatIncreaseOverlap_MPISBAIJ,
1498a30f8f8cSSatish Balay   MatGetValues_MPISBAIJ,
1499a30f8f8cSSatish Balay   0,
1500a30f8f8cSSatish Balay   MatPrintHelp_MPISBAIJ,
1501a30f8f8cSSatish Balay   MatScale_MPISBAIJ,
1502a30f8f8cSSatish Balay   0,
1503a30f8f8cSSatish Balay   0,
1504a30f8f8cSSatish Balay   0,
1505a30f8f8cSSatish Balay   MatGetBlockSize_MPISBAIJ,
1506a30f8f8cSSatish Balay   0,
1507a30f8f8cSSatish Balay   0,
1508a30f8f8cSSatish Balay   0,
1509a30f8f8cSSatish Balay   0,
1510a30f8f8cSSatish Balay   0,
1511a30f8f8cSSatish Balay   0,
1512a30f8f8cSSatish Balay   MatSetUnfactored_MPISBAIJ,
1513a30f8f8cSSatish Balay   0,
1514a30f8f8cSSatish Balay   MatSetValuesBlocked_MPISBAIJ,
1515a30f8f8cSSatish Balay   0,
1516a30f8f8cSSatish Balay   0,
1517a30f8f8cSSatish Balay   0,
151824d5174aSHong Zhang   MatGetMaps_Petsc,
151924d5174aSHong Zhang   0,
152024d5174aSHong Zhang   0,
152124d5174aSHong Zhang   0,
152224d5174aSHong Zhang   0,
152324d5174aSHong Zhang   0,
152424d5174aSHong Zhang   0,
152524d5174aSHong Zhang   MatGetRowMax_MPISBAIJ};
1526a30f8f8cSSatish Balay 
1527a30f8f8cSSatish Balay 
1528a30f8f8cSSatish Balay EXTERN_C_BEGIN
1529a30f8f8cSSatish Balay #undef __FUNC__
1530a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatGetDiagonalBlock_MPISBAIJ"
1531a30f8f8cSSatish Balay int MatGetDiagonalBlock_MPISBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
1532a30f8f8cSSatish Balay {
1533a30f8f8cSSatish Balay   PetscFunctionBegin;
1534a30f8f8cSSatish Balay   *a      = ((Mat_MPISBAIJ *)A->data)->A;
1535a30f8f8cSSatish Balay   *iscopy = PETSC_FALSE;
1536a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1537a30f8f8cSSatish Balay }
1538a30f8f8cSSatish Balay EXTERN_C_END
1539a30f8f8cSSatish Balay 
1540a30f8f8cSSatish Balay #undef __FUNC__
1541b5df2d14SHong Zhang #define __FUNC__ /*<a name=""></a>*/"MatCreate_MPISBAIJ"
1542b5df2d14SHong Zhang int MatCreate_MPISBAIJ(Mat B)
1543b5df2d14SHong Zhang {
1544b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1545b5df2d14SHong Zhang   int          ierr,i;
1546b5df2d14SHong Zhang   PetscTruth   flg;
1547b5df2d14SHong Zhang 
1548b5df2d14SHong Zhang   PetscFunctionBegin;
1549b5df2d14SHong Zhang   if (B->M != B->N || B->m != B->n){ /* N and n are not used after this */
1550b5df2d14SHong Zhang     SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, set M=N and m=n");
1551b5df2d14SHong Zhang   }
1552b5df2d14SHong Zhang 
1553b5df2d14SHong Zhang   B->data = (void*)(b = PetscNew(Mat_MPISBAIJ));CHKPTRQ(b);
1554b5df2d14SHong Zhang   ierr    = PetscMemzero(b,sizeof(Mat_MPISBAIJ));CHKERRQ(ierr);
1555b5df2d14SHong Zhang   ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1556b5df2d14SHong Zhang 
1557b5df2d14SHong Zhang   B->ops->destroy    = MatDestroy_MPISBAIJ;
1558b5df2d14SHong Zhang   B->ops->view       = MatView_MPISBAIJ;
1559b5df2d14SHong Zhang   B->mapping    = 0;
1560b5df2d14SHong Zhang   B->factor     = 0;
1561b5df2d14SHong Zhang   B->assembled  = PETSC_FALSE;
1562b5df2d14SHong Zhang 
1563b5df2d14SHong Zhang   B->insertmode = NOT_SET_VALUES;
1564b5df2d14SHong Zhang   ierr = MPI_Comm_rank(B->comm,&b->rank);CHKERRQ(ierr);
1565b5df2d14SHong Zhang   ierr = MPI_Comm_size(B->comm,&b->size);CHKERRQ(ierr);
1566b5df2d14SHong Zhang 
1567b5df2d14SHong Zhang   ierr = PetscSplitOwnership(B->comm,&B->m,&B->M);CHKERRQ(ierr);
1568b5df2d14SHong Zhang   ierr = PetscSplitOwnership(B->comm,&B->n,&B->N);CHKERRQ(ierr);
1569b5df2d14SHong Zhang 
1570b5df2d14SHong Zhang   /* the information in the maps duplicates the information computed below, eventually
1571b5df2d14SHong Zhang      we should remove the duplicate information that is not contained in the maps */
1572b5df2d14SHong Zhang   ierr = MapCreateMPI(B->comm,B->m,B->M,&B->rmap);CHKERRQ(ierr);
1573b5df2d14SHong Zhang   ierr = MapCreateMPI(B->comm,B->m,B->M,&B->cmap);CHKERRQ(ierr);
1574b5df2d14SHong Zhang 
1575b5df2d14SHong Zhang   /* build local table of row and column ownerships */
1576b5df2d14SHong Zhang   b->rowners = (int*)PetscMalloc(3*(b->size+2)*sizeof(int));CHKPTRQ(b->rowners);
1577b5df2d14SHong Zhang   PLogObjectMemory(B,3*(b->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1578b5df2d14SHong Zhang 
1579b5df2d14SHong Zhang   /* build cache for off array entries formed */
1580b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
1581b5df2d14SHong Zhang   b->donotstash  = PETSC_FALSE;
1582b5df2d14SHong Zhang   b->colmap      = PETSC_NULL;
1583b5df2d14SHong Zhang   b->garray      = PETSC_NULL;
1584b5df2d14SHong Zhang   b->roworiented = PETSC_TRUE;
1585b5df2d14SHong Zhang 
1586b5df2d14SHong Zhang #if defined(PEYSC_USE_MAT_SINGLE)
1587b5df2d14SHong Zhang   /* stuff for MatSetValues_XXX in single precision */
1588b5df2d14SHong Zhang   b->lensetvalues     = 0;
1589b5df2d14SHong Zhang   b->setvaluescopy    = PETSC_NULL;
1590b5df2d14SHong Zhang #endif
1591b5df2d14SHong Zhang 
1592b5df2d14SHong Zhang   /* stuff used in block assembly */
1593b5df2d14SHong Zhang   b->barray       = 0;
1594b5df2d14SHong Zhang 
1595b5df2d14SHong Zhang   /* stuff used for matrix vector multiply */
1596b5df2d14SHong Zhang   b->lvec         = 0;
1597b5df2d14SHong Zhang   b->Mvctx        = 0;
1598b5df2d14SHong Zhang 
1599b5df2d14SHong Zhang   /* stuff for MatGetRow() */
1600b5df2d14SHong Zhang   b->rowindices   = 0;
1601b5df2d14SHong Zhang   b->rowvalues    = 0;
1602b5df2d14SHong Zhang   b->getrowactive = PETSC_FALSE;
1603b5df2d14SHong Zhang 
1604b5df2d14SHong Zhang   /* hash table stuff */
1605b5df2d14SHong Zhang   b->ht           = 0;
1606b5df2d14SHong Zhang   b->hd           = 0;
1607b5df2d14SHong Zhang   b->ht_size      = 0;
1608b5df2d14SHong Zhang   b->ht_flag      = PETSC_FALSE;
1609b5df2d14SHong Zhang   b->ht_fact      = 0;
1610b5df2d14SHong Zhang   b->ht_total_ct  = 0;
1611b5df2d14SHong Zhang   b->ht_insert_ct = 0;
1612b5df2d14SHong Zhang 
1613b5df2d14SHong Zhang   ierr = OptionsHasName(PETSC_NULL,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
1614b5df2d14SHong Zhang   if (flg) {
1615b5df2d14SHong Zhang     double fact = 1.39;
1616b5df2d14SHong Zhang     ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
1617b5df2d14SHong Zhang     ierr = OptionsGetDouble(PETSC_NULL,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
1618b5df2d14SHong Zhang     if (fact <= 1.0) fact = 1.39;
1619b5df2d14SHong Zhang     ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
1620b5df2d14SHong Zhang     PLogInfo(0,"MatCreateMPISBAIJ:Hash table Factor used %5.2f\n",fact);
1621b5df2d14SHong Zhang   }
1622b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
1623b5df2d14SHong Zhang                                      "MatStoreValues_MPISBAIJ",
1624b5df2d14SHong Zhang                                      MatStoreValues_MPISBAIJ);CHKERRQ(ierr);
1625b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
1626b5df2d14SHong Zhang                                      "MatRetrieveValues_MPISBAIJ",
1627b5df2d14SHong Zhang                                      MatRetrieveValues_MPISBAIJ);CHKERRQ(ierr);
1628b5df2d14SHong Zhang   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
1629b5df2d14SHong Zhang                                      "MatGetDiagonalBlock_MPISBAIJ",
1630b5df2d14SHong Zhang                                      MatGetDiagonalBlock_MPISBAIJ);CHKERRQ(ierr);
1631b5df2d14SHong Zhang   PetscFunctionReturn(0);
1632b5df2d14SHong Zhang }
1633b5df2d14SHong Zhang 
1634b5df2d14SHong Zhang #undef __FUNC__
1635b5df2d14SHong Zhang #define __FUNC__ /*<a name=""></a>*/"MatMPISBAIJSetPreallocation"
1636b5df2d14SHong Zhang /*@C
1637b5df2d14SHong Zhang    MatMPISBAIJSetPreallocation - For good matrix assembly performance
1638b5df2d14SHong Zhang    the user should preallocate the matrix storage by setting the parameters
1639b5df2d14SHong Zhang    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1640b5df2d14SHong Zhang    performance can be increased by more than a factor of 50.
1641b5df2d14SHong Zhang 
1642b5df2d14SHong Zhang    Collective on Mat
1643b5df2d14SHong Zhang 
1644b5df2d14SHong Zhang    Input Parameters:
1645b5df2d14SHong Zhang +  A - the matrix
1646b5df2d14SHong Zhang .  bs   - size of blockk
1647b5df2d14SHong Zhang .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1648b5df2d14SHong Zhang            submatrix  (same for all local rows)
1649b5df2d14SHong Zhang .  d_nnz - array containing the number of block nonzeros in the various block rows
1650b5df2d14SHong Zhang            of the in diagonal portion of the local (possibly different for each block
1651b5df2d14SHong Zhang            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1652b5df2d14SHong Zhang .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1653b5df2d14SHong Zhang            submatrix (same for all local rows).
1654b5df2d14SHong Zhang -  o_nnz - array containing the number of nonzeros in the various block rows of the
1655b5df2d14SHong Zhang            off-diagonal portion of the local submatrix (possibly different for
1656b5df2d14SHong Zhang            each block row) or PETSC_NULL.
1657b5df2d14SHong Zhang 
1658b5df2d14SHong Zhang 
1659b5df2d14SHong Zhang    Options Database Keys:
1660b5df2d14SHong Zhang .   -mat_no_unroll - uses code that does not unroll the loops in the
1661b5df2d14SHong Zhang                      block calculations (much slower)
1662b5df2d14SHong Zhang .   -mat_block_size - size of the blocks to use
1663b5df2d14SHong Zhang 
1664b5df2d14SHong Zhang    Notes:
1665b5df2d14SHong Zhang 
1666b5df2d14SHong Zhang    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1667b5df2d14SHong Zhang    than it must be used on all processors that share the object for that argument.
1668b5df2d14SHong Zhang 
1669b5df2d14SHong Zhang    Storage Information:
1670b5df2d14SHong Zhang    For a square global matrix we define each processor's diagonal portion
1671b5df2d14SHong Zhang    to be its local rows and the corresponding columns (a square submatrix);
1672b5df2d14SHong Zhang    each processor's off-diagonal portion encompasses the remainder of the
1673b5df2d14SHong Zhang    local matrix (a rectangular submatrix).
1674b5df2d14SHong Zhang 
1675b5df2d14SHong Zhang    The user can specify preallocated storage for the diagonal part of
1676b5df2d14SHong Zhang    the local submatrix with either d_nz or d_nnz (not both).  Set
1677b5df2d14SHong Zhang    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1678b5df2d14SHong Zhang    memory allocation.  Likewise, specify preallocated storage for the
1679b5df2d14SHong Zhang    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1680b5df2d14SHong Zhang 
1681b5df2d14SHong Zhang    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1682b5df2d14SHong Zhang    the figure below we depict these three local rows and all columns (0-11).
1683b5df2d14SHong Zhang 
1684b5df2d14SHong Zhang .vb
1685b5df2d14SHong Zhang            0 1 2 3 4 5 6 7 8 9 10 11
1686b5df2d14SHong Zhang           -------------------
1687b5df2d14SHong Zhang    row 3  |  o o o d d d o o o o o o
1688b5df2d14SHong Zhang    row 4  |  o o o d d d o o o o o o
1689b5df2d14SHong Zhang    row 5  |  o o o d d d o o o o o o
1690b5df2d14SHong Zhang           -------------------
1691b5df2d14SHong Zhang .ve
1692b5df2d14SHong Zhang 
1693b5df2d14SHong Zhang    Thus, any entries in the d locations are stored in the d (diagonal)
1694b5df2d14SHong Zhang    submatrix, and any entries in the o locations are stored in the
1695b5df2d14SHong Zhang    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1696b5df2d14SHong Zhang    stored simply in the MATSEQBAIJ format for compressed row storage.
1697b5df2d14SHong Zhang 
1698b5df2d14SHong Zhang    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1699b5df2d14SHong Zhang    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1700b5df2d14SHong Zhang    In general, for PDE problems in which most nonzeros are near the diagonal,
1701b5df2d14SHong Zhang    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1702b5df2d14SHong Zhang    or you will get TERRIBLE performance; see the users' manual chapter on
1703b5df2d14SHong Zhang    matrices.
1704b5df2d14SHong Zhang 
1705b5df2d14SHong Zhang    Level: intermediate
1706b5df2d14SHong Zhang 
1707b5df2d14SHong Zhang .keywords: matrix, block, aij, compressed row, sparse, parallel
1708b5df2d14SHong Zhang 
1709b5df2d14SHong Zhang .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1710b5df2d14SHong Zhang @*/
1711b5df2d14SHong Zhang 
1712b5df2d14SHong Zhang int MatMPISBAIJSetPreallocation(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz)
1713b5df2d14SHong Zhang {
1714b5df2d14SHong Zhang   Mat_MPISBAIJ *b;
1715b5df2d14SHong Zhang   int          ierr,i,mbs,Mbs=PETSC_DECIDE,size;
1716b5df2d14SHong Zhang 
1717b5df2d14SHong Zhang   PetscFunctionBegin;
1718b5df2d14SHong Zhang   ierr = OptionsGetInt(PETSC_NULL,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1719b5df2d14SHong Zhang 
1720b5df2d14SHong Zhang   if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
1721b5df2d14SHong Zhang   if (d_nz < -2) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than -2: value %d",d_nz);
1722b5df2d14SHong Zhang   if (o_nz < -2) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than -2: value %d",o_nz);
1723b5df2d14SHong Zhang   if (d_nnz) {
1724b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1725b5df2d14SHong Zhang       if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %d value %d",i,d_nnz[i]);
1726b5df2d14SHong Zhang     }
1727b5df2d14SHong Zhang   }
1728b5df2d14SHong Zhang   if (o_nnz) {
1729b5df2d14SHong Zhang     for (i=0; i<B->m/bs; i++) {
1730b5df2d14SHong Zhang       if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %d value %d",i,o_nnz[i]);
1731b5df2d14SHong Zhang     }
1732b5df2d14SHong Zhang   }
1733b5df2d14SHong Zhang 
1734b5df2d14SHong Zhang   b   = (Mat_MPISBAIJ*)B->data;
1735b5df2d14SHong Zhang   mbs = B->m/bs;
1736b5df2d14SHong Zhang   Mbs = B->M/bs;
1737b5df2d14SHong Zhang   if (mbs*bs != B->m) {
1738b5df2d14SHong Zhang     SETERRQ(PETSC_ERR_ARG_SIZ,"No of local rows/cols must be divisible by blocksize");
1739b5df2d14SHong Zhang   }
1740b5df2d14SHong Zhang 
1741b5df2d14SHong Zhang   b->bs  = bs;
1742b5df2d14SHong Zhang   b->bs2 = bs*bs;
1743b5df2d14SHong Zhang   b->mbs = mbs;
1744b5df2d14SHong Zhang   b->nbs = mbs;
1745b5df2d14SHong Zhang   b->Mbs = Mbs;
1746b5df2d14SHong Zhang   b->Nbs = Mbs;
1747b5df2d14SHong Zhang 
1748b5df2d14SHong Zhang   b->cowners    = b->rowners + b->size + 2;
1749b5df2d14SHong Zhang   b->rowners_bs = b->cowners + b->size + 2;
1750b5df2d14SHong Zhang   ierr = MPI_Allgather(&b->mbs,1,MPI_INT,b->rowners+1,1,MPI_INT,B->comm);CHKERRQ(ierr);
1751b5df2d14SHong Zhang   b->rowners[0]    = 0;
1752b5df2d14SHong Zhang   for (i=2; i<=b->size; i++) {
1753b5df2d14SHong Zhang     b->rowners[i] += b->rowners[i-1];
1754b5df2d14SHong Zhang   }
1755b5df2d14SHong Zhang   b->rstart    = b->rowners[b->rank];
1756b5df2d14SHong Zhang   b->rend      = b->rowners[b->rank+1];
1757b5df2d14SHong Zhang   b->cstart    = b->rstart;
1758b5df2d14SHong Zhang   b->cend      = b->rend;
1759b5df2d14SHong Zhang   for (i=0; i<=b->size; i++) {
1760b5df2d14SHong Zhang     b->rowners_bs[i] = b->rowners[i]*bs;
1761b5df2d14SHong Zhang   }
1762b5df2d14SHong Zhang   b->rstart_bs = b->rstart * bs;
1763b5df2d14SHong Zhang   b->rend_bs   = b->rend * bs;
1764b5df2d14SHong Zhang 
1765b5df2d14SHong Zhang   b->cstart_bs = b->cstart * bs;
1766b5df2d14SHong Zhang   b->cend_bs   = b->cend * bs;
1767b5df2d14SHong Zhang 
1768b5df2d14SHong Zhang 
1769b5df2d14SHong Zhang   if (d_nz == PETSC_DEFAULT) d_nz = 5;
1770b5df2d14SHong Zhang   ierr = MatCreateSeqSBAIJ(PETSC_COMM_SELF,bs,B->m,B->m,d_nz,d_nnz,&b->A);CHKERRQ(ierr);
1771b5df2d14SHong Zhang   PLogObjectParent(B,b->A);
1772b5df2d14SHong Zhang   if (o_nz == PETSC_DEFAULT) o_nz = 0;
1773b5df2d14SHong Zhang   ierr = MatCreateSeqBAIJ(PETSC_COMM_SELF,bs,B->m,B->M,o_nz,o_nnz,&b->B);CHKERRQ(ierr);
1774b5df2d14SHong Zhang   PLogObjectParent(B,b->B);
1775b5df2d14SHong Zhang 
1776b5df2d14SHong Zhang   /* build cache for off array entries formed */
1777b5df2d14SHong Zhang   ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);
1778b5df2d14SHong Zhang 
1779b5df2d14SHong Zhang   PetscFunctionReturn(0);
1780b5df2d14SHong Zhang }
1781b5df2d14SHong Zhang 
1782b5df2d14SHong Zhang #undef __FUNC__
1783a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatCreateMPISBAIJ"
1784a30f8f8cSSatish Balay /*@C
1785a30f8f8cSSatish Balay    MatCreateMPISBAIJ - Creates a sparse parallel matrix in symmetric block AIJ format
1786a30f8f8cSSatish Balay    (block compressed row).  For good matrix assembly performance
1787a30f8f8cSSatish Balay    the user should preallocate the matrix storage by setting the parameters
1788a30f8f8cSSatish Balay    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
1789a30f8f8cSSatish Balay    performance can be increased by more than a factor of 50.
1790a30f8f8cSSatish Balay 
1791a30f8f8cSSatish Balay    Collective on MPI_Comm
1792a30f8f8cSSatish Balay 
1793a30f8f8cSSatish Balay    Input Parameters:
1794a30f8f8cSSatish Balay +  comm - MPI communicator
1795a30f8f8cSSatish Balay .  bs   - size of blockk
1796a30f8f8cSSatish Balay .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
1797a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1798a30f8f8cSSatish Balay            y vector for the matrix-vector product y = Ax.
1799a30f8f8cSSatish Balay .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
1800a30f8f8cSSatish Balay            This value should be the same as the local size used in creating the
1801a30f8f8cSSatish Balay            x vector for the matrix-vector product y = Ax.
1802a30f8f8cSSatish Balay .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
1803a30f8f8cSSatish Balay .  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
1804a30f8f8cSSatish Balay .  d_nz  - number of block nonzeros per block row in diagonal portion of local
1805a30f8f8cSSatish Balay            submatrix  (same for all local rows)
1806a30f8f8cSSatish Balay .  d_nnz - array containing the number of block nonzeros in the various block rows
1807a30f8f8cSSatish Balay            of the in diagonal portion of the local (possibly different for each block
1808a30f8f8cSSatish Balay            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
1809a30f8f8cSSatish Balay .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
1810a30f8f8cSSatish Balay            submatrix (same for all local rows).
1811a30f8f8cSSatish Balay -  o_nnz - array containing the number of nonzeros in the various block rows of the
1812a30f8f8cSSatish Balay            off-diagonal portion of the local submatrix (possibly different for
1813a30f8f8cSSatish Balay            each block row) or PETSC_NULL.
1814a30f8f8cSSatish Balay 
1815a30f8f8cSSatish Balay    Output Parameter:
1816a30f8f8cSSatish Balay .  A - the matrix
1817a30f8f8cSSatish Balay 
1818a30f8f8cSSatish Balay    Options Database Keys:
1819a30f8f8cSSatish Balay .   -mat_no_unroll - uses code that does not unroll the loops in the
1820a30f8f8cSSatish Balay                      block calculations (much slower)
1821a30f8f8cSSatish Balay .   -mat_block_size - size of the blocks to use
1822a30f8f8cSSatish Balay .   -mat_mpi - use the parallel matrix data structures even on one processor
1823a30f8f8cSSatish Balay                (defaults to using SeqBAIJ format on one processor)
1824a30f8f8cSSatish Balay 
1825a30f8f8cSSatish Balay    Notes:
1826a30f8f8cSSatish Balay    The user MUST specify either the local or global matrix dimensions
1827a30f8f8cSSatish Balay    (possibly both).
1828a30f8f8cSSatish Balay 
1829a30f8f8cSSatish Balay    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
1830a30f8f8cSSatish Balay    than it must be used on all processors that share the object for that argument.
1831a30f8f8cSSatish Balay 
1832a30f8f8cSSatish Balay    Storage Information:
1833a30f8f8cSSatish Balay    For a square global matrix we define each processor's diagonal portion
1834a30f8f8cSSatish Balay    to be its local rows and the corresponding columns (a square submatrix);
1835a30f8f8cSSatish Balay    each processor's off-diagonal portion encompasses the remainder of the
1836a30f8f8cSSatish Balay    local matrix (a rectangular submatrix).
1837a30f8f8cSSatish Balay 
1838a30f8f8cSSatish Balay    The user can specify preallocated storage for the diagonal part of
1839a30f8f8cSSatish Balay    the local submatrix with either d_nz or d_nnz (not both).  Set
1840a30f8f8cSSatish Balay    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
1841a30f8f8cSSatish Balay    memory allocation.  Likewise, specify preallocated storage for the
1842a30f8f8cSSatish Balay    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
1843a30f8f8cSSatish Balay 
1844a30f8f8cSSatish Balay    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
1845a30f8f8cSSatish Balay    the figure below we depict these three local rows and all columns (0-11).
1846a30f8f8cSSatish Balay 
1847a30f8f8cSSatish Balay .vb
1848a30f8f8cSSatish Balay            0 1 2 3 4 5 6 7 8 9 10 11
1849a30f8f8cSSatish Balay           -------------------
1850a30f8f8cSSatish Balay    row 3  |  o o o d d d o o o o o o
1851a30f8f8cSSatish Balay    row 4  |  o o o d d d o o o o o o
1852a30f8f8cSSatish Balay    row 5  |  o o o d d d o o o o o o
1853a30f8f8cSSatish Balay           -------------------
1854a30f8f8cSSatish Balay .ve
1855a30f8f8cSSatish Balay 
1856a30f8f8cSSatish Balay    Thus, any entries in the d locations are stored in the d (diagonal)
1857a30f8f8cSSatish Balay    submatrix, and any entries in the o locations are stored in the
1858a30f8f8cSSatish Balay    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
1859a30f8f8cSSatish Balay    stored simply in the MATSEQBAIJ format for compressed row storage.
1860a30f8f8cSSatish Balay 
1861a30f8f8cSSatish Balay    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
1862a30f8f8cSSatish Balay    and o_nz should indicate the number of block nonzeros per row in the o matrix.
1863a30f8f8cSSatish Balay    In general, for PDE problems in which most nonzeros are near the diagonal,
1864a30f8f8cSSatish Balay    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
1865a30f8f8cSSatish Balay    or you will get TERRIBLE performance; see the users' manual chapter on
1866a30f8f8cSSatish Balay    matrices.
1867a30f8f8cSSatish Balay 
1868a30f8f8cSSatish Balay    Level: intermediate
1869a30f8f8cSSatish Balay 
1870a30f8f8cSSatish Balay .keywords: matrix, block, aij, compressed row, sparse, parallel
1871a30f8f8cSSatish Balay 
1872a209d233SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqSBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
1873a30f8f8cSSatish Balay @*/
1874a30f8f8cSSatish Balay 
1875a30f8f8cSSatish Balay int MatCreateMPISBAIJ(MPI_Comm comm,int bs,int m,int n,int M,int N,int d_nz,int *d_nnz,int o_nz,int *o_nnz,Mat *A)
1876a30f8f8cSSatish Balay {
1877b5df2d14SHong Zhang   int ierr;
1878a30f8f8cSSatish Balay 
1879a30f8f8cSSatish Balay   PetscFunctionBegin;
1880b5df2d14SHong Zhang   ierr = MatCreate(comm,m,n,M,N,A);CHKERRQ(ierr);
1881b5df2d14SHong Zhang   ierr = MatSetType(*A,MATMPISBAIJ);CHKERRQ(ierr);
1882b5df2d14SHong Zhang   ierr = MatMPISBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
1883a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1884a30f8f8cSSatish Balay }
1885a30f8f8cSSatish Balay 
1886a30f8f8cSSatish Balay 
1887a30f8f8cSSatish Balay #undef __FUNC__
1888a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatDuplicate_MPISBAIJ"
1889a30f8f8cSSatish Balay static int MatDuplicate_MPISBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
1890a30f8f8cSSatish Balay {
1891a30f8f8cSSatish Balay   Mat          mat;
1892a30f8f8cSSatish Balay   Mat_MPISBAIJ *a,*oldmat = (Mat_MPISBAIJ*)matin->data;
1893a30f8f8cSSatish Balay   int          ierr,len=0;
1894a30f8f8cSSatish Balay 
1895a30f8f8cSSatish Balay   PetscFunctionBegin;
1896a30f8f8cSSatish Balay   *newmat       = 0;
1897b5df2d14SHong Zhang   ierr = MatCreate(matin->comm,matin->m,matin->n,matin->M,matin->N,&mat);CHKERRQ(ierr);
1898b5df2d14SHong Zhang   ierr = MatSetType(mat,MATMPISBAIJ);CHKERRQ(ierr);
1899b5df2d14SHong Zhang   a = (Mat_MPISBAIJ*)mat->data;
1900a30f8f8cSSatish Balay   a->bs  = oldmat->bs;
1901a30f8f8cSSatish Balay   a->bs2 = oldmat->bs2;
1902a30f8f8cSSatish Balay   a->mbs = oldmat->mbs;
1903a30f8f8cSSatish Balay   a->nbs = oldmat->nbs;
1904a30f8f8cSSatish Balay   a->Mbs = oldmat->Mbs;
1905a30f8f8cSSatish Balay   a->Nbs = oldmat->Nbs;
1906a30f8f8cSSatish Balay 
1907a30f8f8cSSatish Balay   a->rstart       = oldmat->rstart;
1908a30f8f8cSSatish Balay   a->rend         = oldmat->rend;
1909a30f8f8cSSatish Balay   a->cstart       = oldmat->cstart;
1910a30f8f8cSSatish Balay   a->cend         = oldmat->cend;
1911a30f8f8cSSatish Balay   a->size         = oldmat->size;
1912a30f8f8cSSatish Balay   a->rank         = oldmat->rank;
1913a30f8f8cSSatish Balay   a->donotstash   = oldmat->donotstash;
1914a30f8f8cSSatish Balay   a->roworiented  = oldmat->roworiented;
1915a30f8f8cSSatish Balay   a->rowindices   = 0;
1916a30f8f8cSSatish Balay   a->rowvalues    = 0;
1917a30f8f8cSSatish Balay   a->getrowactive = PETSC_FALSE;
1918a30f8f8cSSatish Balay   a->barray       = 0;
1919a30f8f8cSSatish Balay   a->rstart_bs    = oldmat->rstart_bs;
1920a30f8f8cSSatish Balay   a->rend_bs      = oldmat->rend_bs;
1921a30f8f8cSSatish Balay   a->cstart_bs    = oldmat->cstart_bs;
1922a30f8f8cSSatish Balay   a->cend_bs      = oldmat->cend_bs;
1923a30f8f8cSSatish Balay 
1924a30f8f8cSSatish Balay   /* hash table stuff */
1925a30f8f8cSSatish Balay   a->ht           = 0;
1926a30f8f8cSSatish Balay   a->hd           = 0;
1927a30f8f8cSSatish Balay   a->ht_size      = 0;
1928a30f8f8cSSatish Balay   a->ht_flag      = oldmat->ht_flag;
1929a30f8f8cSSatish Balay   a->ht_fact      = oldmat->ht_fact;
1930a30f8f8cSSatish Balay   a->ht_total_ct  = 0;
1931a30f8f8cSSatish Balay   a->ht_insert_ct = 0;
1932a30f8f8cSSatish Balay 
1933a30f8f8cSSatish Balay   a->rowners = (int*)PetscMalloc(3*(a->size+2)*sizeof(int));CHKPTRQ(a->rowners);
1934a30f8f8cSSatish Balay   PLogObjectMemory(mat,3*(a->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPISBAIJ));
1935a30f8f8cSSatish Balay   a->cowners    = a->rowners + a->size + 2;
1936a30f8f8cSSatish Balay   a->rowners_bs = a->cowners + a->size + 2;
1937a30f8f8cSSatish Balay   ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(int));CHKERRQ(ierr);
1938a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
1939a30f8f8cSSatish Balay   ierr = MatStashCreate_Private(matin->comm,oldmat->bs,&mat->bstash);CHKERRQ(ierr);
1940a30f8f8cSSatish Balay   if (oldmat->colmap) {
1941a30f8f8cSSatish Balay #if defined (PETSC_USE_CTABLE)
1942a30f8f8cSSatish Balay   ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
1943a30f8f8cSSatish Balay #else
1944a30f8f8cSSatish Balay     a->colmap = (int*)PetscMalloc((a->Nbs)*sizeof(int));CHKPTRQ(a->colmap);
1945a30f8f8cSSatish Balay     PLogObjectMemory(mat,(a->Nbs)*sizeof(int));
1946a30f8f8cSSatish Balay     ierr      = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(int));CHKERRQ(ierr);
1947a30f8f8cSSatish Balay #endif
1948a30f8f8cSSatish Balay   } else a->colmap = 0;
1949a30f8f8cSSatish Balay   if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
1950a30f8f8cSSatish Balay     a->garray = (int*)PetscMalloc(len*sizeof(int));CHKPTRQ(a->garray);
1951a30f8f8cSSatish Balay     PLogObjectMemory(mat,len*sizeof(int));
1952a30f8f8cSSatish Balay     ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));CHKERRQ(ierr);
1953a30f8f8cSSatish Balay   } else a->garray = 0;
1954a30f8f8cSSatish Balay 
1955a30f8f8cSSatish Balay   ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
1956a30f8f8cSSatish Balay   PLogObjectParent(mat,a->lvec);
1957a30f8f8cSSatish Balay   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
1958a30f8f8cSSatish Balay 
1959a30f8f8cSSatish Balay   PLogObjectParent(mat,a->Mvctx);
1960a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
1961a30f8f8cSSatish Balay   PLogObjectParent(mat,a->A);
1962a30f8f8cSSatish Balay   ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
1963a30f8f8cSSatish Balay   PLogObjectParent(mat,a->B);
1964a30f8f8cSSatish Balay   ierr = FListDuplicate(mat->qlist,&matin->qlist);CHKERRQ(ierr);
1965a30f8f8cSSatish Balay   *newmat = mat;
1966a30f8f8cSSatish Balay   PetscFunctionReturn(0);
1967a30f8f8cSSatish Balay }
1968a30f8f8cSSatish Balay 
1969a30f8f8cSSatish Balay #include "petscsys.h"
1970a30f8f8cSSatish Balay 
1971a30f8f8cSSatish Balay #undef __FUNC__
1972a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatLoad_MPISBAIJ"
1973a30f8f8cSSatish Balay int MatLoad_MPISBAIJ(Viewer viewer,MatType type,Mat *newmat)
1974a30f8f8cSSatish Balay {
1975a30f8f8cSSatish Balay   Mat          A;
1976a30f8f8cSSatish Balay   int          i,nz,ierr,j,rstart,rend,fd;
1977a30f8f8cSSatish Balay   Scalar       *vals,*buf;
1978a30f8f8cSSatish Balay   MPI_Comm     comm = ((PetscObject)viewer)->comm;
1979a30f8f8cSSatish Balay   MPI_Status   status;
1980a30f8f8cSSatish Balay   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,*browners,maxnz,*cols;
1981a30f8f8cSSatish Balay   int          *locrowlens,*sndcounts = 0,*procsnz = 0,jj,*mycols,*ibuf;
1982a30f8f8cSSatish Balay   int          tag = ((PetscObject)viewer)->tag,bs=1,Mbs,mbs,extra_rows;
1983a30f8f8cSSatish Balay   int          *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
1984a30f8f8cSSatish Balay   int          dcount,kmax,k,nzcount,tmp;
1985a30f8f8cSSatish Balay 
1986a30f8f8cSSatish Balay   PetscFunctionBegin;
1987a30f8f8cSSatish Balay   ierr = OptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
1988a30f8f8cSSatish Balay 
1989a30f8f8cSSatish Balay   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1990a30f8f8cSSatish Balay   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
1991a30f8f8cSSatish Balay   if (!rank) {
1992a30f8f8cSSatish Balay     ierr = ViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
1993a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
199429bbc08cSBarry Smith     if (header[0] != MAT_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
1995a30f8f8cSSatish Balay     if (header[3] < 0) {
199629bbc08cSBarry Smith       SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format, cannot load as MPISBAIJ");
1997a30f8f8cSSatish Balay     }
1998a30f8f8cSSatish Balay   }
1999a30f8f8cSSatish Balay 
2000a30f8f8cSSatish Balay   ierr = MPI_Bcast(header+1,3,MPI_INT,0,comm);CHKERRQ(ierr);
2001a30f8f8cSSatish Balay   M = header[1]; N = header[2];
2002a30f8f8cSSatish Balay 
200329bbc08cSBarry Smith   if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");
2004a30f8f8cSSatish Balay 
2005a30f8f8cSSatish Balay   /*
2006a30f8f8cSSatish Balay      This code adds extra rows to make sure the number of rows is
2007a30f8f8cSSatish Balay      divisible by the blocksize
2008a30f8f8cSSatish Balay   */
2009a30f8f8cSSatish Balay   Mbs        = M/bs;
2010a30f8f8cSSatish Balay   extra_rows = bs - M + bs*(Mbs);
2011a30f8f8cSSatish Balay   if (extra_rows == bs) extra_rows = 0;
2012a30f8f8cSSatish Balay   else                  Mbs++;
2013a30f8f8cSSatish Balay   if (extra_rows &&!rank) {
2014a30f8f8cSSatish Balay     PLogInfo(0,"MatLoad_MPISBAIJ:Padding loaded matrix to match blocksize\n");
2015a30f8f8cSSatish Balay   }
2016a30f8f8cSSatish Balay 
2017a30f8f8cSSatish Balay   /* determine ownership of all rows */
2018a30f8f8cSSatish Balay   mbs = Mbs/size + ((Mbs % size) > rank);
2019a30f8f8cSSatish Balay   m   = mbs * bs;
2020a30f8f8cSSatish Balay   rowners = (int*)PetscMalloc(2*(size+2)*sizeof(int));CHKPTRQ(rowners);
2021a30f8f8cSSatish Balay   browners = rowners + size + 1;
2022a30f8f8cSSatish Balay   ierr = MPI_Allgather(&mbs,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
2023a30f8f8cSSatish Balay   rowners[0] = 0;
2024a30f8f8cSSatish Balay   for (i=2; i<=size; i++) rowners[i] += rowners[i-1];
2025a30f8f8cSSatish Balay   for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
2026a30f8f8cSSatish Balay   rstart = rowners[rank];
2027a30f8f8cSSatish Balay   rend   = rowners[rank+1];
2028a30f8f8cSSatish Balay 
2029a30f8f8cSSatish Balay   /* distribute row lengths to all processors */
2030a30f8f8cSSatish Balay   locrowlens = (int*)PetscMalloc((rend-rstart)*bs*sizeof(int));CHKPTRQ(locrowlens);
2031a30f8f8cSSatish Balay   if (!rank) {
2032a30f8f8cSSatish Balay     rowlengths = (int*)PetscMalloc((M+extra_rows)*sizeof(int));CHKPTRQ(rowlengths);
2033a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
2034a30f8f8cSSatish Balay     for (i=0; i<extra_rows; i++) rowlengths[M+i] = 1;
2035a30f8f8cSSatish Balay     sndcounts = (int*)PetscMalloc(size*sizeof(int));CHKPTRQ(sndcounts);
2036a30f8f8cSSatish Balay     for (i=0; i<size; i++) sndcounts[i] = browners[i+1] - browners[i];
2037a30f8f8cSSatish Balay     ierr = MPI_Scatterv(rowlengths,sndcounts,browners,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2038a30f8f8cSSatish Balay     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
2039a30f8f8cSSatish Balay   } else {
2040a30f8f8cSSatish Balay     ierr = MPI_Scatterv(0,0,0,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2041a30f8f8cSSatish Balay   }
2042a30f8f8cSSatish Balay 
20430222edb1SHong Zhang   if (!rank) {   /* procs[0] */
2044a30f8f8cSSatish Balay     /* calculate the number of nonzeros on each processor */
2045a30f8f8cSSatish Balay     procsnz = (int*)PetscMalloc(size*sizeof(int));CHKPTRQ(procsnz);
2046a30f8f8cSSatish Balay     ierr    = PetscMemzero(procsnz,size*sizeof(int));CHKERRQ(ierr);
2047a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2048a30f8f8cSSatish Balay       for (j=rowners[i]*bs; j< rowners[i+1]*bs; j++) {
2049a30f8f8cSSatish Balay         procsnz[i] += rowlengths[j];
2050a30f8f8cSSatish Balay       }
2051a30f8f8cSSatish Balay     }
2052a30f8f8cSSatish Balay     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
2053a30f8f8cSSatish Balay 
2054a30f8f8cSSatish Balay     /* determine max buffer needed and allocate it */
2055a30f8f8cSSatish Balay     maxnz = 0;
2056a30f8f8cSSatish Balay     for (i=0; i<size; i++) {
2057a30f8f8cSSatish Balay       maxnz = PetscMax(maxnz,procsnz[i]);
2058a30f8f8cSSatish Balay     }
2059a30f8f8cSSatish Balay     cols = (int*)PetscMalloc(maxnz*sizeof(int));CHKPTRQ(cols);
2060a30f8f8cSSatish Balay 
2061a30f8f8cSSatish Balay     /* read in my part of the matrix column indices  */
2062a30f8f8cSSatish Balay     nz = procsnz[0];
2063a30f8f8cSSatish Balay     ibuf = (int*)PetscMalloc(nz*sizeof(int));CHKPTRQ(ibuf);
2064a30f8f8cSSatish Balay     mycols = ibuf;
2065a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2066a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
2067a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }
2068a30f8f8cSSatish Balay 
2069a30f8f8cSSatish Balay     /* read in every ones (except the last) and ship off */
2070a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2071a30f8f8cSSatish Balay       nz   = procsnz[i];
2072a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2073a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz,MPI_INT,i,tag,comm);CHKERRQ(ierr);
2074a30f8f8cSSatish Balay     }
2075a30f8f8cSSatish Balay     /* read in the stuff for the last proc */
2076a30f8f8cSSatish Balay     if (size != 1) {
2077a30f8f8cSSatish Balay       nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
2078a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2079a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
2080a30f8f8cSSatish Balay       ierr = MPI_Send(cols,nz+extra_rows,MPI_INT,size-1,tag,comm);CHKERRQ(ierr);
2081a30f8f8cSSatish Balay     }
2082a30f8f8cSSatish Balay     ierr = PetscFree(cols);CHKERRQ(ierr);
20830222edb1SHong Zhang   } else {  /* procs[i], i>0 */
2084a30f8f8cSSatish Balay     /* determine buffer space needed for message */
2085a30f8f8cSSatish Balay     nz = 0;
2086a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2087a30f8f8cSSatish Balay       nz += locrowlens[i];
2088a30f8f8cSSatish Balay     }
2089a30f8f8cSSatish Balay     ibuf   = (int*)PetscMalloc(nz*sizeof(int));CHKPTRQ(ibuf);
2090a30f8f8cSSatish Balay     mycols = ibuf;
2091a30f8f8cSSatish Balay     /* receive message of column indices*/
2092a30f8f8cSSatish Balay     ierr = MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);CHKERRQ(ierr);
2093a30f8f8cSSatish Balay     ierr = MPI_Get_count(&status,MPI_INT,&maxnz);CHKERRQ(ierr);
209429bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2095a30f8f8cSSatish Balay   }
2096a30f8f8cSSatish Balay 
2097a30f8f8cSSatish Balay   /* loop over local rows, determining number of off diagonal entries */
2098a30f8f8cSSatish Balay   dlens  = (int*)PetscMalloc(2*(rend-rstart+1)*sizeof(int));CHKPTRQ(dlens);
2099a30f8f8cSSatish Balay   odlens = dlens + (rend-rstart);
2100a30f8f8cSSatish Balay   mask   = (int*)PetscMalloc(3*Mbs*sizeof(int));CHKPTRQ(mask);
2101a30f8f8cSSatish Balay   ierr   = PetscMemzero(mask,3*Mbs*sizeof(int));CHKERRQ(ierr);
2102a30f8f8cSSatish Balay   masked1 = mask    + Mbs;
2103a30f8f8cSSatish Balay   masked2 = masked1 + Mbs;
2104a30f8f8cSSatish Balay   rowcount = 0; nzcount = 0;
2105a30f8f8cSSatish Balay   for (i=0; i<mbs; i++) {
2106a30f8f8cSSatish Balay     dcount  = 0;
2107a30f8f8cSSatish Balay     odcount = 0;
2108a30f8f8cSSatish Balay     for (j=0; j<bs; j++) {
2109a30f8f8cSSatish Balay       kmax = locrowlens[rowcount];
2110a30f8f8cSSatish Balay       for (k=0; k<kmax; k++) {
21110222edb1SHong Zhang         tmp = mycols[nzcount++]/bs; /* block col. index */
2112a30f8f8cSSatish Balay         if (!mask[tmp]) {
2113a30f8f8cSSatish Balay           mask[tmp] = 1;
21140222edb1SHong Zhang           if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp; /* entry in off-diag portion */
21150222edb1SHong Zhang           else masked1[dcount++] = tmp; /* entry in diag portion */
2116a30f8f8cSSatish Balay         }
2117a30f8f8cSSatish Balay       }
2118a30f8f8cSSatish Balay       rowcount++;
2119a30f8f8cSSatish Balay     }
2120a30f8f8cSSatish Balay 
21210222edb1SHong Zhang     dlens[i]  = dcount;  /* d_nzz[i] */
21220222edb1SHong Zhang     odlens[i] = odcount; /* o_nzz[i] */
2123a30f8f8cSSatish Balay 
2124a30f8f8cSSatish Balay     /* zero out the mask elements we set */
2125a30f8f8cSSatish Balay     for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
2126a30f8f8cSSatish Balay     for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
2127a30f8f8cSSatish Balay   }
2128a30f8f8cSSatish Balay 
2129a30f8f8cSSatish Balay   /* create our matrix */
21307e06b45fSHong Zhang   ierr = MatCreateMPISBAIJ(comm,bs,m,m,PETSC_DETERMINE,PETSC_DETERMINE,0,dlens,0,odlens,newmat);
2131bfe19f1aSHong Zhang   CHKERRQ(ierr);
2132a30f8f8cSSatish Balay   A = *newmat;
2133a30f8f8cSSatish Balay   MatSetOption(A,MAT_COLUMNS_SORTED);
2134a30f8f8cSSatish Balay 
2135a30f8f8cSSatish Balay   if (!rank) {
2136a30f8f8cSSatish Balay     buf = (Scalar*)PetscMalloc(maxnz*sizeof(Scalar));CHKPTRQ(buf);
2137a30f8f8cSSatish Balay     /* read in my part of the matrix numerical values  */
2138a30f8f8cSSatish Balay     nz = procsnz[0];
2139a30f8f8cSSatish Balay     vals = buf;
2140a30f8f8cSSatish Balay     mycols = ibuf;
2141a30f8f8cSSatish Balay     if (size == 1)  nz -= extra_rows;
2142a30f8f8cSSatish Balay     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2143a30f8f8cSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }
2144a30f8f8cSSatish Balay 
2145a30f8f8cSSatish Balay     /* insert into matrix */
2146a30f8f8cSSatish Balay     jj      = rstart*bs;
2147a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
21487e06b45fSHong Zhang       ierr = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2149a30f8f8cSSatish Balay       mycols += locrowlens[i];
2150a30f8f8cSSatish Balay       vals   += locrowlens[i];
2151a30f8f8cSSatish Balay       jj++;
2152a30f8f8cSSatish Balay     }
21537e06b45fSHong Zhang 
2154a30f8f8cSSatish Balay     /* read in other processors (except the last one) and ship out */
2155a30f8f8cSSatish Balay     for (i=1; i<size-1; i++) {
2156a30f8f8cSSatish Balay       nz   = procsnz[i];
2157a30f8f8cSSatish Balay       vals = buf;
2158a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2159a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
2160a30f8f8cSSatish Balay     }
2161a30f8f8cSSatish Balay     /* the last proc */
2162a30f8f8cSSatish Balay     if (size != 1){
2163a30f8f8cSSatish Balay       nz   = procsnz[i] - extra_rows;
2164a30f8f8cSSatish Balay       vals = buf;
2165a30f8f8cSSatish Balay       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2166a30f8f8cSSatish Balay       for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
2167a30f8f8cSSatish Balay       ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
2168a30f8f8cSSatish Balay     }
2169a30f8f8cSSatish Balay     ierr = PetscFree(procsnz);CHKERRQ(ierr);
21707e06b45fSHong Zhang 
2171a30f8f8cSSatish Balay   } else {
2172a30f8f8cSSatish Balay     /* receive numeric values */
2173a30f8f8cSSatish Balay     buf = (Scalar*)PetscMalloc(nz*sizeof(Scalar));CHKPTRQ(buf);
2174a30f8f8cSSatish Balay 
2175a30f8f8cSSatish Balay     /* receive message of values*/
2176a30f8f8cSSatish Balay     vals   = buf;
2177a30f8f8cSSatish Balay     mycols = ibuf;
2178a30f8f8cSSatish Balay     ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
2179a30f8f8cSSatish Balay     ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
218029bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
2181a30f8f8cSSatish Balay 
2182a30f8f8cSSatish Balay     /* insert into matrix */
2183a30f8f8cSSatish Balay     jj      = rstart*bs;
2184a30f8f8cSSatish Balay     for (i=0; i<m; i++) {
2185a30f8f8cSSatish Balay       ierr    = MatSetValues_MPISBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
2186a30f8f8cSSatish Balay       mycols += locrowlens[i];
2187a30f8f8cSSatish Balay       vals   += locrowlens[i];
2188a30f8f8cSSatish Balay       jj++;
2189a30f8f8cSSatish Balay     }
2190a30f8f8cSSatish Balay   }
21917e06b45fSHong Zhang 
2192a30f8f8cSSatish Balay   ierr = PetscFree(locrowlens);CHKERRQ(ierr);
2193a30f8f8cSSatish Balay   ierr = PetscFree(buf);CHKERRQ(ierr);
2194a30f8f8cSSatish Balay   ierr = PetscFree(ibuf);CHKERRQ(ierr);
2195a30f8f8cSSatish Balay   ierr = PetscFree(rowners);CHKERRQ(ierr);
2196a30f8f8cSSatish Balay   ierr = PetscFree(dlens);CHKERRQ(ierr);
2197a30f8f8cSSatish Balay   ierr = PetscFree(mask);CHKERRQ(ierr);
2198a30f8f8cSSatish Balay   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2199a30f8f8cSSatish Balay   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2200a30f8f8cSSatish Balay   PetscFunctionReturn(0);
2201a30f8f8cSSatish Balay }
2202a30f8f8cSSatish Balay 
2203a30f8f8cSSatish Balay #undef __FUNC__
2204a30f8f8cSSatish Balay #define __FUNC__ /*<a name=""></a>*/"MatMPISBAIJSetHashTableFactor"
2205a30f8f8cSSatish Balay /*@
2206a30f8f8cSSatish Balay    MatMPISBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.
2207a30f8f8cSSatish Balay 
2208a30f8f8cSSatish Balay    Input Parameters:
2209a30f8f8cSSatish Balay .  mat  - the matrix
2210a30f8f8cSSatish Balay .  fact - factor
2211a30f8f8cSSatish Balay 
2212a30f8f8cSSatish Balay    Collective on Mat
2213a30f8f8cSSatish Balay 
2214a30f8f8cSSatish Balay    Level: advanced
2215a30f8f8cSSatish Balay 
2216a30f8f8cSSatish Balay   Notes:
2217a30f8f8cSSatish Balay    This can also be set by the command line option: -mat_use_hash_table fact
2218a30f8f8cSSatish Balay 
2219a30f8f8cSSatish Balay .keywords: matrix, hashtable, factor, HT
2220a30f8f8cSSatish Balay 
2221a30f8f8cSSatish Balay .seealso: MatSetOption()
2222a30f8f8cSSatish Balay @*/
2223a30f8f8cSSatish Balay int MatMPISBAIJSetHashTableFactor(Mat mat,PetscReal fact)
2224a30f8f8cSSatish Balay {
2225a30f8f8cSSatish Balay   PetscFunctionBegin;
222629bbc08cSBarry Smith   SETERRQ(1,"Function not yet written for SBAIJ format");
222796e2eec7SHong Zhang   /* PetscFunctionReturn(0); */
2228a30f8f8cSSatish Balay }
222924d5174aSHong Zhang 
223024d5174aSHong Zhang #undef __FUNC__
2231d0566740SHong Zhang #define __FUNC__ /*<a name=""></a>*/"MatGetRowMax_MPISBAIJ"
223224d5174aSHong Zhang int MatGetRowMax_MPISBAIJ(Mat A,Vec v)
223324d5174aSHong Zhang {
223424d5174aSHong Zhang   Mat_MPISBAIJ  *a = (Mat_MPISBAIJ*)A->data;
2235*f4c0e9e4SHong Zhang   int          ierr,i;
2236*f4c0e9e4SHong Zhang   PetscReal    *va,*vb,atmp;
2237*f4c0e9e4SHong Zhang   double       *work,*svalues,*rvalues;
2238*f4c0e9e4SHong Zhang   Vec          vtmp;
2239*f4c0e9e4SHong Zhang   Mat_SeqBAIJ  *b = (Mat_SeqBAIJ*)(a->B)->data;
2240*f4c0e9e4SHong Zhang   int          bs,mbs,*bi,*bj,brow,j,ncols,krow,kcol,col,row,Mbs,bcol;
2241*f4c0e9e4SHong Zhang   int          rank,size,*rowners,*rowners_bs,dest,count,tag,source;
2242*f4c0e9e4SHong Zhang   Scalar       *ba;
2243*f4c0e9e4SHong Zhang   MPI_Status   stat;
224424d5174aSHong Zhang 
224524d5174aSHong Zhang   PetscFunctionBegin;
2246d36791b2SHong Zhang   ierr = MatGetRowMax(a->A,v);CHKERRQ(ierr);
2247*f4c0e9e4SHong Zhang   ierr = VecGetArray(v,&va);CHKERRQ(ierr);
2248*f4c0e9e4SHong Zhang 
2249*f4c0e9e4SHong Zhang   ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRA(ierr);
2250*f4c0e9e4SHong Zhang   ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRA(ierr);
2251*f4c0e9e4SHong Zhang 
2252*f4c0e9e4SHong Zhang   bs   = a->bs;
2253*f4c0e9e4SHong Zhang   mbs  = a->mbs;
2254*f4c0e9e4SHong Zhang   Mbs  = a->Mbs;
2255*f4c0e9e4SHong Zhang   ba   = b->a;
2256*f4c0e9e4SHong Zhang   bi   = b->i;
2257*f4c0e9e4SHong Zhang   bj   = b->j;
2258*f4c0e9e4SHong Zhang   PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] M: %d, bs: %d, mbs: %d \n",rank,bs*Mbs,bs,mbs);
2259*f4c0e9e4SHong Zhang   PetscSynchronizedFlush(PETSC_COMM_WORLD);
2260*f4c0e9e4SHong Zhang 
2261*f4c0e9e4SHong Zhang   /* find ownerships */
2262*f4c0e9e4SHong Zhang   rowners    = a->rowners;
2263*f4c0e9e4SHong Zhang   rowners_bs = a->rowners_bs;
2264*f4c0e9e4SHong Zhang   /*
2265*f4c0e9e4SHong Zhang   for (i=0; i<size+1; i++) {
2266*f4c0e9e4SHong Zhang     PetscPrintf(PETSC_COMM_SELF,"rowners[%d]: %d, rowners_bs: %d\n",i,rowners[i],rowners_bs[i]);
2267*f4c0e9e4SHong Zhang   }
2268*f4c0e9e4SHong Zhang   */
2269*f4c0e9e4SHong Zhang 
2270*f4c0e9e4SHong Zhang   /* each proc creates an array to be distributed */
2271*f4c0e9e4SHong Zhang   work    = (double*)malloc(bs*Mbs*sizeof(double));
2272*f4c0e9e4SHong Zhang   ierr  = PetscMemzero(work,bs*Mbs*sizeof(double));CHKERRQ(ierr);
2273*f4c0e9e4SHong Zhang 
2274*f4c0e9e4SHong Zhang   /* row_max for B */
2275*f4c0e9e4SHong Zhang   for (i=0; i<mbs; i++) {
2276*f4c0e9e4SHong Zhang     ncols = bi[1] - bi[0]; bi++;
2277*f4c0e9e4SHong Zhang     brow  = bs*i;
2278*f4c0e9e4SHong Zhang     for (j=0; j<ncols; j++){
2279*f4c0e9e4SHong Zhang       bcol = bs*(*bj);
2280*f4c0e9e4SHong Zhang       for (kcol=0; kcol<bs; kcol++){
2281*f4c0e9e4SHong Zhang         col = bcol + kcol;      /* col index */
2282*f4c0e9e4SHong Zhang         PetscPrintf(PETSC_COMM_SELF,"[%d], col: %d\n",rank,col);
2283*f4c0e9e4SHong Zhang         for (krow=0; krow<bs; krow++){
2284*f4c0e9e4SHong Zhang           atmp = PetscAbsScalar(*ba); ba++;
2285*f4c0e9e4SHong Zhang           row = brow + krow;    /* row index */
2286*f4c0e9e4SHong Zhang           /* printf("val[%d,%d]: %g\n",row,col,atmp); */
2287*f4c0e9e4SHong Zhang           if (va[row] < atmp) va[row] = atmp;
2288*f4c0e9e4SHong Zhang           if (work[col] < atmp) work[col] = atmp;
2289*f4c0e9e4SHong Zhang         }
2290*f4c0e9e4SHong Zhang       }
2291*f4c0e9e4SHong Zhang       bj++;
2292*f4c0e9e4SHong Zhang     }
2293*f4c0e9e4SHong Zhang   }
2294*f4c0e9e4SHong Zhang 
2295*f4c0e9e4SHong Zhang   /* send values to its owners */
2296*f4c0e9e4SHong Zhang   if (rank != size-1){
2297*f4c0e9e4SHong Zhang     for (dest=rank+1; dest<size; dest++){
2298*f4c0e9e4SHong Zhang       svalues = work + rowners_bs[dest];
2299*f4c0e9e4SHong Zhang       count = rowners[dest+1]-rowners[dest];
2300*f4c0e9e4SHong Zhang       MPI_Send(svalues,count,MPI_DOUBLE_PRECISION,dest,rank,PETSC_COMM_WORLD);
2301*f4c0e9e4SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] sends to [%d]\n",rank,dest);
2302*f4c0e9e4SHong Zhang     }
2303*f4c0e9e4SHong Zhang     PetscSynchronizedFlush(PETSC_COMM_WORLD);
2304*f4c0e9e4SHong Zhang   }
2305*f4c0e9e4SHong Zhang 
2306*f4c0e9e4SHong Zhang   /* receive values */
2307*f4c0e9e4SHong Zhang   if (rank != 0){
2308*f4c0e9e4SHong Zhang     rvalues = work;
2309*f4c0e9e4SHong Zhang     count = mbs*bs;
2310*f4c0e9e4SHong Zhang     for (source=0; source<rank; source++){
2311*f4c0e9e4SHong Zhang       MPI_Recv(rvalues,count,MPI_DOUBLE_PRECISION,MPI_ANY_SOURCE,MPI_ANY_TAG,PETSC_COMM_WORLD,&stat);
2312*f4c0e9e4SHong Zhang       /* process values */
2313*f4c0e9e4SHong Zhang       for (i=0; i<count; i++){
2314*f4c0e9e4SHong Zhang         if (va[i] < rvalues[i]) {
2315*f4c0e9e4SHong Zhang           va[i] = rvalues[i];
2316*f4c0e9e4SHong Zhang           PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] recv a larger val from [%d]\n",rank,stat.MPI_SOURCE);
2317*f4c0e9e4SHong Zhang           PetscSynchronizedFlush(PETSC_COMM_WORLD);
2318*f4c0e9e4SHong Zhang         }
2319*f4c0e9e4SHong Zhang       }
2320*f4c0e9e4SHong Zhang       PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] received from [%d] \n",rank,stat.MPI_SOURCE);
2321*f4c0e9e4SHong Zhang     }
2322*f4c0e9e4SHong Zhang     PetscSynchronizedFlush(PETSC_COMM_WORLD);
2323*f4c0e9e4SHong Zhang   }
2324*f4c0e9e4SHong Zhang 
2325*f4c0e9e4SHong Zhang   for (i=0; i<10000; i++) j=i; /* delay for print output */
2326*f4c0e9e4SHong Zhang 
2327*f4c0e9e4SHong Zhang   PetscSynchronizedPrintf(PETSC_COMM_WORLD,"[%d] is done. \n",rank);
2328*f4c0e9e4SHong Zhang   PetscSynchronizedFlush(PETSC_COMM_WORLD);
2329*f4c0e9e4SHong Zhang 
2330*f4c0e9e4SHong Zhang   ierr = VecRestoreArray(v,&va);CHKERRQ(ierr);
2331*f4c0e9e4SHong Zhang   free(work);
233224d5174aSHong Zhang   PetscFunctionReturn(0);
233324d5174aSHong Zhang }
2334