xref: /petsc/src/mat/impls/sbaij/seq/sbaij.h (revision 6524c165f7ddaf30fd7457737f668f984c8ababf) 
149b5e25fSSatish Balay 
2*6524c165SJacob Faibussowitsch #ifndef __SBAIJ_H
349b5e25fSSatish Balay #define __SBAIJ_H
4af0996ceSBarry Smith #include <petsc/private/matimpl.h>
5c6db04a5SJed Brown #include <../src/mat/impls/baij/seq/baij.h>
649b5e25fSSatish Balay 
749b5e25fSSatish Balay /*
849b5e25fSSatish Balay   MATSEQSBAIJ format - Block compressed row storage. The i[] and j[]
949b5e25fSSatish Balay   arrays start at 0.
1049b5e25fSSatish Balay */
1149b5e25fSSatish Balay 
1249b5e25fSSatish Balay typedef struct {
13dd6ea824SBarry Smith   SEQAIJHEADER(MatScalar);
14e6b907acSBarry Smith   SEQBAIJHEADER;
1513f74950SBarry Smith   PetscInt        *inew;               /* pointer to beginning of each row of reordered matrix */
1613f74950SBarry Smith   PetscInt        *jnew;               /* column values: jnew + i[k] is start of row k */
17a6175056SHong Zhang   MatScalar       *anew;               /* nonzero diagonal and superdiagonal elements of reordered matrix */
18d59c15a7SBarry Smith   PetscScalar     *solves_work;        /* work space used in MatSolves */
1913f74950SBarry Smith   PetscInt         solves_work_n;      /* size of solves_work */
2013f74950SBarry Smith   PetscInt        *a2anew;             /* map used for symm permutation */
21ace3abfcSBarry Smith   PetscBool        permute;            /* if true, a non-trivial permutation is used for factorization */
22ace3abfcSBarry Smith   PetscBool        ignore_ltriangular; /* if true, ignore the lower triangular values inserted by users */
23ace3abfcSBarry Smith   PetscBool        getrow_utriangular; /* if true, MatGetRow_SeqSBAIJ() is enabled to get the upper part of the row */
244108e4d5SBarry Smith   Mat_SeqAIJ_Inode inode;
2538702af4SBarry Smith   unsigned short  *jshort;
26ace3abfcSBarry Smith   PetscBool        free_jshort;
2749b5e25fSSatish Balay } Mat_SeqSBAIJ;
2849b5e25fSSatish Balay 
295a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorSymbolic_SeqSBAIJ(Mat, Mat, IS, const MatFactorInfo *);
305a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorSymbolic_SeqSBAIJ_inplace(Mat, Mat, IS, const MatFactorInfo *);
315a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactor_SeqSBAIJ(Mat, IS, const MatFactorInfo *);
325a576424SJed Brown PETSC_INTERN PetscErrorCode MatICCFactorSymbolic_SeqSBAIJ(Mat, Mat, IS, const MatFactorInfo *);
335a576424SJed Brown PETSC_INTERN PetscErrorCode MatICCFactorSymbolic_SeqSBAIJ_inplace(Mat, Mat, IS, const MatFactorInfo *);
345a576424SJed Brown PETSC_INTERN PetscErrorCode MatDuplicate_SeqSBAIJ(Mat, MatDuplicateOption, Mat *);
355a576424SJed Brown PETSC_INTERN PetscErrorCode MatMarkDiagonal_SeqSBAIJ(Mat);
365a576424SJed Brown PETSC_INTERN PetscErrorCode MatIncreaseOverlap_SeqSBAIJ(Mat, PetscInt, IS[], PetscInt);
37b2fa50c1SHong Zhang PETSC_INTERN PetscErrorCode MatSeqSBAIJZeroOps_Private(Mat);
387dae84e0SHong Zhang PETSC_INTERN PetscErrorCode MatCreateSubMatrix_SeqSBAIJ(Mat, IS, IS, MatReuse, Mat *);
397dae84e0SHong Zhang PETSC_INTERN PetscErrorCode MatCreateSubMatrices_SeqSBAIJ(Mat, PetscInt, const IS[], const IS[], MatReuse, Mat *[]);
405a576424SJed Brown PETSC_INTERN PetscErrorCode MatScale_SeqSBAIJ(Mat, PetscScalar);
415a576424SJed Brown PETSC_INTERN PetscErrorCode MatNorm_SeqSBAIJ(Mat, NormType, PetscReal *);
425a576424SJed Brown PETSC_INTERN PetscErrorCode MatEqual_SeqSBAIJ(Mat, Mat, PetscBool *);
435a576424SJed Brown PETSC_INTERN PetscErrorCode MatGetDiagonal_SeqSBAIJ(Mat, Vec);
445a576424SJed Brown PETSC_INTERN PetscErrorCode MatDiagonalScale_SeqSBAIJ(Mat, Vec, Vec);
455a576424SJed Brown PETSC_INTERN PetscErrorCode MatGetInfo_SeqSBAIJ(Mat, MatInfoType, MatInfo *);
465a576424SJed Brown PETSC_INTERN PetscErrorCode MatZeroEntries_SeqSBAIJ(Mat);
475a576424SJed Brown PETSC_INTERN PetscErrorCode MatGetRowMaxAbs_SeqSBAIJ(Mat, Vec, PetscInt[]);
485a576424SJed Brown PETSC_INTERN PetscErrorCode MatGetInertia_SeqSBAIJ(Mat, PetscInt *, PetscInt *, PetscInt *);
495a576424SJed Brown PETSC_INTERN PetscErrorCode MatDestroy_SeqSBAIJ(Mat);
505a576424SJed Brown PETSC_INTERN PetscErrorCode MatView_SeqSBAIJ(Mat, PetscViewer);
5149b5e25fSSatish Balay 
525a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
535a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_NaturalOrdering_inplace(Mat, Mat, const MatFactorInfo *);
545a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat, Vec, Vec);
555a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering(Mat, Vec, Vec);
56910cf402Sprj- PETSC_INTERN PetscErrorCode MatMatSolve_SeqSBAIJ_1_NaturalOrdering(Mat, Mat, Mat);
570a3c351aSHong Zhang 
585a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat, Vec, Vec);
595a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat, Vec, Vec);
605a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_inplace(Mat, Vec, Vec);
615a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_inplace(Mat, Vec, Vec);
620a3c351aSHong Zhang 
635a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_NaturalOrdering(Mat, Vec, Vec);
645a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_NaturalOrdering(Mat, Vec, Vec);
655a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1(Mat, Vec, Vec);
665a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1(Mat, Vec, Vec);
67266135f8SHong Zhang 
685a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
695a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat, Vec, Vec);
705a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat, Vec, Vec);
715a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat, Vec, Vec);
72266135f8SHong Zhang 
735a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
745a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat, Vec, Vec);
755a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat, Vec, Vec);
765a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat, Vec, Vec);
77266135f8SHong Zhang 
785a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
795a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat, Vec, Vec);
805a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat, Vec, Vec);
815a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat, Vec, Vec);
82266135f8SHong Zhang 
835a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
845a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat, Vec, Vec);
855a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat, Vec, Vec);
865a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat, Vec, Vec);
87266135f8SHong Zhang 
885a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
895a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat, Vec, Vec);
905a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat, Vec, Vec);
915a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat, Vec, Vec);
92266135f8SHong Zhang 
935a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
945a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat, Vec, Vec);
955a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat, Vec, Vec);
965a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat, Vec, Vec);
9749b5e25fSSatish Balay 
985a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_N_NaturalOrdering(Mat, Mat, const MatFactorInfo *);
995a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat, Vec, Vec);
1005a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat, Vec, Vec);
1015a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat, Vec, Vec);
1025a576424SJed Brown PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_N_inplace(Mat, Vec, Vec);
1035a576424SJed Brown PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_N_inplace(Mat, Vec, Vec);
1049495ac64SHong Zhang 
1055a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_N(Mat, Mat, const MatFactorInfo *);
1065a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_inplace(Mat, Mat, const MatFactorInfo *);
1075a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_2(Mat, Mat, const MatFactorInfo *);
1085a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_3(Mat, Mat, const MatFactorInfo *);
1095a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat, Mat, const MatFactorInfo *);
1105a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat, Mat, const MatFactorInfo *);
1115a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_6(Mat, Mat, const MatFactorInfo *);
1125a576424SJed Brown PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_7(Mat, Mat, const MatFactorInfo *);
1139495ac64SHong Zhang 
1145a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_N_inplace(Mat, Vec, Vec);
1155a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_inplace(Mat, Vec, Vec);
1165a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1(Mat, Vec, Vec);
1175a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_2_inplace(Mat, Vec, Vec);
1185a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_3_inplace(Mat, Vec, Vec);
1195a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_4_inplace(Mat, Vec, Vec);
1205a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_5_inplace(Mat, Vec, Vec);
1215a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_6_inplace(Mat, Vec, Vec);
1225a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_7_inplace(Mat, Vec, Vec);
1239495ac64SHong Zhang 
1245a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolves_SeqSBAIJ_1_inplace(Mat, Vecs, Vecs);
1255a576424SJed Brown PETSC_INTERN PetscErrorCode MatSolves_SeqSBAIJ_1(Mat, Vecs, Vecs);
1269495ac64SHong Zhang 
1275a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_1(Mat, Vec, Vec);
1285a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_2(Mat, Vec, Vec);
1295a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_3(Mat, Vec, Vec);
1305a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_4(Mat, Vec, Vec);
1315a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_5(Mat, Vec, Vec);
1325a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_6(Mat, Vec, Vec);
1335a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_7(Mat, Vec, Vec);
1345a576424SJed Brown PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_N(Mat, Vec, Vec);
1359495ac64SHong Zhang 
1365a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_1(Mat, Vec, Vec, Vec);
1375a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_2(Mat, Vec, Vec, Vec);
1385a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_3(Mat, Vec, Vec, Vec);
1395a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_4(Mat, Vec, Vec, Vec);
1405a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_5(Mat, Vec, Vec, Vec);
1415a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_6(Mat, Vec, Vec, Vec);
1425a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_7(Mat, Vec, Vec, Vec);
1435a576424SJed Brown PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_N(Mat, Vec, Vec, Vec);
144671cb588SHong Zhang 
1455a576424SJed Brown PETSC_INTERN PetscErrorCode MatSOR_SeqSBAIJ(Mat, Vec, PetscReal, MatSORType, PetscReal, PetscInt, PetscInt, Vec);
1465a576424SJed Brown PETSC_INTERN PetscErrorCode MatLoad_SeqSBAIJ(Mat, PetscViewer);
1475a576424SJed Brown PETSC_INTERN PetscErrorCode MatSeqSBAIJSetNumericFactorization_inplace(Mat, PetscBool);
148d595f711SHong Zhang 
1494de5dceeSHong Zhang PETSC_INTERN PetscErrorCode MatAXPYGetPreallocation_SeqSBAIJ(Mat, Mat, PetscInt *);
1504de5dceeSHong Zhang 
15159f5e6ceSHong Zhang PETSC_INTERN PetscErrorCode MatCreateMPIMatConcatenateSeqMat_SeqSBAIJ(MPI_Comm, Mat, PetscInt, MatReuse, Mat *);
15259f5e6ceSHong Zhang PETSC_INTERN PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPISBAIJ(MPI_Comm, Mat, PetscInt, MatReuse, Mat *);
153d79853d5SSatish Balay /* required by mpisbaij.c */
154d79853d5SSatish Balay PETSC_INTERN PetscErrorCode MatGetValues_SeqSBAIJ(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], PetscScalar[]);
155d79853d5SSatish Balay PETSC_INTERN PetscErrorCode MatSetValues_SeqSBAIJ(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
156d79853d5SSatish Balay PETSC_INTERN PetscErrorCode MatSetValuesBlocked_SeqSBAIJ(Mat, PetscInt, const PetscInt[], PetscInt, const PetscInt[], const PetscScalar[], InsertMode);
157d79853d5SSatish Balay PETSC_INTERN PetscErrorCode MatGetRow_SeqSBAIJ(Mat, PetscInt, PetscInt *, PetscInt **, PetscScalar **);
158d79853d5SSatish Balay PETSC_INTERN PetscErrorCode MatRestoreRow_SeqSBAIJ(Mat, PetscInt, PetscInt *, PetscInt **, PetscScalar **);
159d79853d5SSatish Balay PETSC_INTERN PetscErrorCode MatZeroRows_SeqSBAIJ(Mat, IS, PetscScalar *, Vec, Vec);
160d79853d5SSatish Balay 
16149b5e25fSSatish Balay #endif
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