149b5e25fSSatish Balay 249b5e25fSSatish Balay #if !defined(__SBAIJ_H) 349b5e25fSSatish Balay #define __SBAIJ_H 47c4f633dSBarry Smith #include "private/matimpl.h" 57c4f633dSBarry Smith #include "../src/mat/impls/baij/seq/baij.h" 649b5e25fSSatish Balay 749b5e25fSSatish Balay /* 849b5e25fSSatish Balay MATSEQSBAIJ format - Block compressed row storage. The i[] and j[] 949b5e25fSSatish Balay arrays start at 0. 1049b5e25fSSatish Balay */ 1149b5e25fSSatish Balay 1249b5e25fSSatish Balay typedef struct { 13dd6ea824SBarry Smith SEQAIJHEADER(MatScalar); 14e6b907acSBarry Smith SEQBAIJHEADER; 1513f74950SBarry Smith PetscInt *inew; /* pointer to beginning of each row of reordered matrix */ 1613f74950SBarry Smith PetscInt *jnew; /* column values: jnew + i[k] is start of row k */ 17a6175056SHong Zhang MatScalar *anew; /* nonzero diagonal and superdiagonal elements of reordered matrix */ 18d59c15a7SBarry Smith PetscScalar *solves_work; /* work space used in MatSolves */ 1913f74950SBarry Smith PetscInt solves_work_n;/* size of solves_work */ 2013f74950SBarry Smith PetscInt *a2anew; /* map used for symm permutation */ 21*ace3abfcSBarry Smith PetscBool permute; /* if true, a non-trivial permutation is used for factorization */ 22*ace3abfcSBarry Smith PetscBool ignore_ltriangular; /* if true, ignore the lower triangular values inserted by users */ 23*ace3abfcSBarry Smith PetscBool getrow_utriangular; /* if true, MatGetRow_SeqSBAIJ() is enabled to get the upper part of the row */ 244108e4d5SBarry Smith Mat_SeqAIJ_Inode inode; 2538702af4SBarry Smith unsigned short *jshort; 26*ace3abfcSBarry Smith PetscBool free_jshort; 2749b5e25fSSatish Balay } Mat_SeqSBAIJ; 2849b5e25fSSatish Balay 29f349cc81SSatish Balay EXTERN_C_BEGIN 30ab93d7beSBarry Smith EXTERN PetscErrorCode MatSeqSBAIJSetPreallocation_SeqSBAIJ(Mat,PetscInt,PetscInt,PetscInt*); 31f349cc81SSatish Balay EXTERN_C_END 320481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorSymbolic_SeqSBAIJ(Mat,Mat,IS,const MatFactorInfo*); 33d595f711SHong Zhang EXTERN PetscErrorCode MatCholeskyFactorSymbolic_SeqSBAIJ_inplace(Mat,Mat,IS,const MatFactorInfo*); 340481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactor_SeqSBAIJ(Mat,IS,const MatFactorInfo*); 350481f469SBarry Smith EXTERN PetscErrorCode MatICCFactorSymbolic_SeqSBAIJ(Mat,Mat,IS,const MatFactorInfo*); 36d595f711SHong Zhang EXTERN PetscErrorCode MatICCFactorSymbolic_SeqSBAIJ_inplace(Mat,Mat,IS,const MatFactorInfo*); 37dfbe8321SBarry Smith EXTERN PetscErrorCode MatDuplicate_SeqSBAIJ(Mat,MatDuplicateOption,Mat*); 38dfbe8321SBarry Smith EXTERN PetscErrorCode MatMarkDiagonal_SeqSBAIJ(Mat); 399495ac64SHong Zhang EXTERN PetscErrorCode MatIncreaseOverlap_SeqSBAIJ(Mat,PetscInt,IS[],PetscInt); 404aa3045dSJed Brown EXTERN PetscErrorCode MatGetSubMatrix_SeqSBAIJ(Mat,IS,IS,MatReuse,Mat*); 419495ac64SHong Zhang EXTERN PetscErrorCode MatGetSubMatrices_SeqSBAIJ(Mat,PetscInt,const IS[],const IS[],MatReuse,Mat*[]); 429495ac64SHong Zhang EXTERN PetscErrorCode MatScale_SeqSBAIJ(Mat,PetscScalar); 439495ac64SHong Zhang EXTERN PetscErrorCode MatNorm_SeqSBAIJ(Mat,NormType,PetscReal *); 44*ace3abfcSBarry Smith EXTERN PetscErrorCode MatEqual_SeqSBAIJ(Mat,Mat,PetscBool *); 459495ac64SHong Zhang EXTERN PetscErrorCode MatGetDiagonal_SeqSBAIJ(Mat,Vec); 469495ac64SHong Zhang EXTERN PetscErrorCode MatDiagonalScale_SeqSBAIJ(Mat,Vec,Vec); 479495ac64SHong Zhang EXTERN PetscErrorCode MatGetInfo_SeqSBAIJ(Mat,MatInfoType,MatInfo *); 489495ac64SHong Zhang EXTERN PetscErrorCode MatZeroEntries_SeqSBAIJ(Mat); 49985db425SBarry Smith EXTERN PetscErrorCode MatGetRowMaxAbs_SeqSBAIJ(Mat,Vec,PetscInt[]); 509495ac64SHong Zhang EXTERN PetscErrorCode MatGetInertia_SeqSBAIJ(Mat,PetscInt*,PetscInt*,PetscInt*); 5120db9a53SJed Brown EXTERN PetscErrorCode MatDestroy_SeqSBAIJ(Mat); 5220db9a53SJed Brown EXTERN PetscErrorCode MatView_SeqSBAIJ(Mat,PetscViewer); 5349b5e25fSSatish Balay 540481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 55d595f711SHong Zhang EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Mat,const MatFactorInfo*); 560a3c351aSHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec); 5735233d99SShri Abhyankar EXTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec); 580a3c351aSHong Zhang 590a3c351aSHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec); 600a3c351aSHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec); 610a3c351aSHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_inplace(Mat,Vec,Vec); 620a3c351aSHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_inplace(Mat,Vec,Vec); 630a3c351aSHong Zhang 6435233d99SShri Abhyankar EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec); 6535233d99SShri Abhyankar EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec); 6635233d99SShri Abhyankar EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1(Mat,Vec,Vec); 6735233d99SShri Abhyankar EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1(Mat,Vec,Vec); 68266135f8SHong Zhang 690481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 704f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec); 714f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec); 724f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec); 73266135f8SHong Zhang 740481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 754f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec); 764f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec); 774f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec); 78266135f8SHong Zhang 790481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 804f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec); 814f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec); 824f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec); 83266135f8SHong Zhang 840481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 854f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec); 864f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec); 874f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec); 88266135f8SHong Zhang 890481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 904f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec); 914f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec); 924f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec); 93266135f8SHong Zhang 940481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 954f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec); 964f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec); 974f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec); 9849b5e25fSSatish Balay 990481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_N_NaturalOrdering(Mat,Mat,const MatFactorInfo*); 1004f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec); 1014f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec); 1024f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec); 1034f79d315SHong Zhang EXTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_N_inplace(Mat,Vec,Vec); 1044f79d315SHong Zhang EXTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_N_inplace(Mat,Vec,Vec); 1059495ac64SHong Zhang 1060481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_N(Mat,Mat,const MatFactorInfo*); 107d595f711SHong Zhang EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_inplace(Mat,Mat,const MatFactorInfo*); 1080481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_2(Mat,Mat,const MatFactorInfo*); 1090481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_3(Mat,Mat,const MatFactorInfo*); 1100481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat,Mat,const MatFactorInfo*); 1110481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat,Mat,const MatFactorInfo*); 1120481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_6(Mat,Mat,const MatFactorInfo*); 1130481f469SBarry Smith EXTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_7(Mat,Mat,const MatFactorInfo*); 1149495ac64SHong Zhang 1154f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_N_inplace(Mat,Vec,Vec); 1160a3c351aSHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_1_inplace(Mat,Vec,Vec); 11735233d99SShri Abhyankar EXTERN PetscErrorCode MatSolve_SeqSBAIJ_1(Mat,Vec,Vec); 1184f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_2_inplace(Mat,Vec,Vec); 1194f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_3_inplace(Mat,Vec,Vec); 1204f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_4_inplace(Mat,Vec,Vec); 1214f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_5_inplace(Mat,Vec,Vec); 1224f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_6_inplace(Mat,Vec,Vec); 1234f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_7_inplace(Mat,Vec,Vec); 1249495ac64SHong Zhang 1254f79d315SHong Zhang EXTERN PetscErrorCode MatSolves_SeqSBAIJ_1_inplace(Mat,Vecs,Vecs); 1269dcdb97aSHong Zhang EXTERN PetscErrorCode MatSolves_SeqSBAIJ_1(Mat,Vecs,Vecs); 1279495ac64SHong Zhang 1280a3c351aSHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec); 12935233d99SShri Abhyankar EXTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec); 1304f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec); 1314f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec); 1324f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec); 1334f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec); 1344f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec); 1354f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec); 1364f79d315SHong Zhang EXTERN PetscErrorCode MatSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec); 1379495ac64SHong Zhang 1389495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_1(Mat,Vec,Vec); 1399495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_2(Mat,Vec,Vec); 1409495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_3(Mat,Vec,Vec); 1419495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_4(Mat,Vec,Vec); 1429495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_5(Mat,Vec,Vec); 1439495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_6(Mat,Vec,Vec); 1449495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_7(Mat,Vec,Vec); 1459495ac64SHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_N(Mat,Vec,Vec); 1469495ac64SHong Zhang 147eeffb40dSHong Zhang EXTERN PetscErrorCode MatMult_SeqSBAIJ_1_Hermitian(Mat,Vec,Vec); 148eeffb40dSHong Zhang 1499495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_1(Mat,Vec,Vec,Vec); 1509495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_2(Mat,Vec,Vec,Vec); 1519495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_3(Mat,Vec,Vec,Vec); 1529495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_4(Mat,Vec,Vec,Vec); 1539495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_5(Mat,Vec,Vec,Vec); 1549495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_6(Mat,Vec,Vec,Vec); 1559495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_7(Mat,Vec,Vec,Vec); 1569495ac64SHong Zhang EXTERN PetscErrorCode MatMultAdd_SeqSBAIJ_N(Mat,Vec,Vec,Vec); 157671cb588SHong Zhang 15841f059aeSBarry Smith EXTERN PetscErrorCode MatSOR_SeqSBAIJ(Mat,Vec,PetscReal,MatSORType,PetscReal,PetscInt,PetscInt,Vec); 159112444f4SShri Abhyankar EXTERN PetscErrorCode MatLoad_SeqSBAIJ(Mat,PetscViewer); 160*ace3abfcSBarry Smith EXTERN PetscErrorCode MatSeqSBAIJSetNumericFactorization_inplace(Mat,PetscBool ); 161d595f711SHong Zhang 16249b5e25fSSatish Balay #endif 163