xref: /petsc/src/mat/impls/sbaij/seq/sbaij.h (revision 2c3ca321cdac8b3d77d0c0c1d47582abc00b7bcd)
1 
2 #if !defined(__SBAIJ_H)
3 #define __SBAIJ_H
4 #include <petsc-private/matimpl.h>
5 #include <../src/mat/impls/baij/seq/baij.h>
6 
7 /*
8   MATSEQSBAIJ format - Block compressed row storage. The i[] and j[]
9   arrays start at 0.
10 */
11 
12 typedef struct {
13   SEQAIJHEADER(MatScalar);
14   SEQBAIJHEADER;
15   PetscInt         *inew;        /* pointer to beginning of each row of reordered matrix */
16   PetscInt         *jnew;        /* column values: jnew + i[k] is start of row k */
17   MatScalar        *anew;        /* nonzero diagonal and superdiagonal elements of reordered matrix */
18   PetscScalar      *solves_work; /* work space used in MatSolves */
19   PetscInt         solves_work_n; /* size of solves_work */
20   PetscInt         *a2anew;        /* map used for symm permutation */
21   PetscBool        permute;        /* if true, a non-trivial permutation is used for factorization */
22   PetscBool        ignore_ltriangular; /* if true, ignore the lower triangular values inserted by users */
23   PetscBool        getrow_utriangular; /* if true, MatGetRow_SeqSBAIJ() is enabled to get the upper part of the row */
24   Mat_SeqAIJ_Inode inode;
25   unsigned short   *jshort;
26   PetscBool        free_jshort;
27 } Mat_SeqSBAIJ;
28 
29 EXTERN_C_BEGIN
30 PETSC_INTERN PetscErrorCode MatSeqSBAIJSetPreallocation_SeqSBAIJ(Mat,PetscInt,PetscInt,PetscInt*);
31 EXTERN_C_END
32 PETSC_INTERN PetscErrorCode MatCholeskyFactorSymbolic_SeqSBAIJ(Mat,Mat,IS,const MatFactorInfo*);
33 PETSC_INTERN PetscErrorCode MatCholeskyFactorSymbolic_SeqSBAIJ_inplace(Mat,Mat,IS,const MatFactorInfo*);
34 PETSC_INTERN PetscErrorCode MatCholeskyFactor_SeqSBAIJ(Mat,IS,const MatFactorInfo*);
35 PETSC_INTERN PetscErrorCode MatICCFactorSymbolic_SeqSBAIJ(Mat,Mat,IS,const MatFactorInfo*);
36 PETSC_INTERN PetscErrorCode MatICCFactorSymbolic_SeqSBAIJ_inplace(Mat,Mat,IS,const MatFactorInfo*);
37 PETSC_INTERN PetscErrorCode MatDuplicate_SeqSBAIJ(Mat,MatDuplicateOption,Mat*);
38 PETSC_INTERN PetscErrorCode MatMarkDiagonal_SeqSBAIJ(Mat);
39 PETSC_INTERN PetscErrorCode MatIncreaseOverlap_SeqSBAIJ(Mat,PetscInt,IS[],PetscInt);
40 PETSC_INTERN PetscErrorCode MatGetSubMatrix_SeqSBAIJ(Mat,IS,IS,MatReuse,Mat*);
41 PETSC_INTERN PetscErrorCode MatGetSubMatrices_SeqSBAIJ(Mat,PetscInt,const IS[],const IS[],MatReuse,Mat*[]);
42 PETSC_INTERN PetscErrorCode MatScale_SeqSBAIJ(Mat,PetscScalar);
43 PETSC_INTERN PetscErrorCode MatNorm_SeqSBAIJ(Mat,NormType,PetscReal*);
44 PETSC_INTERN PetscErrorCode MatEqual_SeqSBAIJ(Mat,Mat,PetscBool*);
45 PETSC_INTERN PetscErrorCode MatGetDiagonal_SeqSBAIJ(Mat,Vec);
46 PETSC_INTERN PetscErrorCode MatDiagonalScale_SeqSBAIJ(Mat,Vec,Vec);
47 PETSC_INTERN PetscErrorCode MatGetInfo_SeqSBAIJ(Mat,MatInfoType,MatInfo*);
48 PETSC_INTERN PetscErrorCode MatZeroEntries_SeqSBAIJ(Mat);
49 PETSC_INTERN PetscErrorCode MatGetRowMaxAbs_SeqSBAIJ(Mat,Vec,PetscInt[]);
50 PETSC_INTERN PetscErrorCode MatGetInertia_SeqSBAIJ(Mat,PetscInt*,PetscInt*,PetscInt*);
51 PETSC_INTERN PetscErrorCode MatDestroy_SeqSBAIJ(Mat);
52 PETSC_INTERN PetscErrorCode MatView_SeqSBAIJ(Mat,PetscViewer);
53 
54 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
55 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Mat,const MatFactorInfo*);
56 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec);
57 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec);
58 
59 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec);
60 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec);
61 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_inplace(Mat,Vec,Vec);
62 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_inplace(Mat,Vec,Vec);
63 
64 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec);
65 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec);
66 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_1(Mat,Vec,Vec);
67 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_1(Mat,Vec,Vec);
68 
69 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
70 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec);
71 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec);
72 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec);
73 
74 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
75 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec);
76 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec);
77 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec);
78 
79 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
80 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec);
81 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec);
82 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec);
83 
84 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
85 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec);
86 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec);
87 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec);
88 
89 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
90 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec);
91 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec);
92 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec);
93 
94 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
95 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec);
96 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec);
97 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec);
98 
99 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_N_NaturalOrdering(Mat,Mat,const MatFactorInfo*);
100 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec);
101 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec);
102 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec);
103 PETSC_INTERN PetscErrorCode MatForwardSolve_SeqSBAIJ_N_inplace(Mat,Vec,Vec);
104 PETSC_INTERN PetscErrorCode MatBackwardSolve_SeqSBAIJ_N_inplace(Mat,Vec,Vec);
105 
106 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_N(Mat,Mat,const MatFactorInfo*);
107 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_1_inplace(Mat,Mat,const MatFactorInfo*);
108 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_2(Mat,Mat,const MatFactorInfo*);
109 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_3(Mat,Mat,const MatFactorInfo*);
110 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat,Mat,const MatFactorInfo*);
111 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat,Mat,const MatFactorInfo*);
112 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_6(Mat,Mat,const MatFactorInfo*);
113 PETSC_INTERN PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_7(Mat,Mat,const MatFactorInfo*);
114 
115 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_N_inplace(Mat,Vec,Vec);
116 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_inplace(Mat,Vec,Vec);
117 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1(Mat,Vec,Vec);
118 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_2_inplace(Mat,Vec,Vec);
119 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_3_inplace(Mat,Vec,Vec);
120 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_4_inplace(Mat,Vec,Vec);
121 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_5_inplace(Mat,Vec,Vec);
122 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_6_inplace(Mat,Vec,Vec);
123 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_7_inplace(Mat,Vec,Vec);
124 
125 PETSC_INTERN PetscErrorCode MatSolves_SeqSBAIJ_1_inplace(Mat,Vecs,Vecs);
126 PETSC_INTERN PetscErrorCode MatSolves_SeqSBAIJ_1(Mat,Vecs,Vecs);
127 
128 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering_inplace(Mat,Vec,Vec);
129 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_1_NaturalOrdering(Mat,Vec,Vec);
130 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_2_NaturalOrdering_inplace(Mat,Vec,Vec);
131 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_3_NaturalOrdering_inplace(Mat,Vec,Vec);
132 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_4_NaturalOrdering_inplace(Mat,Vec,Vec);
133 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_5_NaturalOrdering_inplace(Mat,Vec,Vec);
134 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_6_NaturalOrdering_inplace(Mat,Vec,Vec);
135 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_7_NaturalOrdering_inplace(Mat,Vec,Vec);
136 PETSC_INTERN PetscErrorCode MatSolve_SeqSBAIJ_N_NaturalOrdering_inplace(Mat,Vec,Vec);
137 
138 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_1(Mat,Vec,Vec);
139 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_2(Mat,Vec,Vec);
140 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_3(Mat,Vec,Vec);
141 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_4(Mat,Vec,Vec);
142 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_5(Mat,Vec,Vec);
143 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_6(Mat,Vec,Vec);
144 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_7(Mat,Vec,Vec);
145 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_N(Mat,Vec,Vec);
146 
147 PETSC_INTERN PetscErrorCode MatMult_SeqSBAIJ_1_Hermitian(Mat,Vec,Vec);
148 
149 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_1(Mat,Vec,Vec,Vec);
150 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_2(Mat,Vec,Vec,Vec);
151 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_3(Mat,Vec,Vec,Vec);
152 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_4(Mat,Vec,Vec,Vec);
153 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_5(Mat,Vec,Vec,Vec);
154 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_6(Mat,Vec,Vec,Vec);
155 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_7(Mat,Vec,Vec,Vec);
156 PETSC_INTERN PetscErrorCode MatMultAdd_SeqSBAIJ_N(Mat,Vec,Vec,Vec);
157 
158 PETSC_INTERN PetscErrorCode MatSOR_SeqSBAIJ(Mat,Vec,PetscReal,MatSORType,PetscReal,PetscInt,PetscInt,Vec);
159 PETSC_INTERN PetscErrorCode MatLoad_SeqSBAIJ(Mat,PetscViewer);
160 PETSC_INTERN PetscErrorCode MatSeqSBAIJSetNumericFactorization_inplace(Mat,PetscBool);
161 
162 #endif
163