1be1d678aSKris Buschelman #define PETSCMAT_DLL 249b5e25fSSatish Balay 37c4f633dSBarry Smith #include "../src/mat/impls/baij/seq/baij.h" 4c60f0209SBarry Smith #include "../src/mat/blockinvert.h" 549b5e25fSSatish Balay #include "petscbt.h" 67c4f633dSBarry Smith #include "../src/mat/impls/sbaij/seq/sbaij.h" 7f3da1532SBarry Smith #include "petscblaslapack.h" 849b5e25fSSatish Balay 94a2ae208SSatish Balay #undef __FUNCT__ 104a2ae208SSatish Balay #define __FUNCT__ "MatIncreaseOverlap_SeqSBAIJ" 1113f74950SBarry Smith PetscErrorCode MatIncreaseOverlap_SeqSBAIJ(Mat A,PetscInt is_max,IS is[],PetscInt ov) 1249b5e25fSSatish Balay { 135eee224dSHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 146849ba73SBarry Smith PetscErrorCode ierr; 155d0c19d7SBarry Smith PetscInt brow,i,j,k,l,mbs,n,*nidx,isz,bcol,bcol_max,start,end,*ai,*aj,bs,*nidx2; 165d0c19d7SBarry Smith const PetscInt *idx; 17521d7252SBarry Smith PetscBT table,table0; 18d94109b8SHong Zhang 19d94109b8SHong Zhang PetscFunctionBegin; 20e32f2f54SBarry Smith if (ov < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative overlap specified"); 21d94109b8SHong Zhang mbs = a->mbs; 22d94109b8SHong Zhang ai = a->i; 23d94109b8SHong Zhang aj = a->j; 24d0f46423SBarry Smith bs = A->rmap->bs; 25d94109b8SHong Zhang ierr = PetscBTCreate(mbs,table);CHKERRQ(ierr); 2613f74950SBarry Smith ierr = PetscMalloc((mbs+1)*sizeof(PetscInt),&nidx);CHKERRQ(ierr); 27d0f46423SBarry Smith ierr = PetscMalloc((A->rmap->N+1)*sizeof(PetscInt),&nidx2);CHKERRQ(ierr); 28d94109b8SHong Zhang ierr = PetscBTCreate(mbs,table0);CHKERRQ(ierr); 29d94109b8SHong Zhang 30d94109b8SHong Zhang for (i=0; i<is_max; i++) { /* for each is */ 31d94109b8SHong Zhang isz = 0; 32d94109b8SHong Zhang ierr = PetscBTMemzero(mbs,table);CHKERRQ(ierr); 33d94109b8SHong Zhang 34d94109b8SHong Zhang /* Extract the indices, assume there can be duplicate entries */ 35d94109b8SHong Zhang ierr = ISGetIndices(is[i],&idx);CHKERRQ(ierr); 36d94109b8SHong Zhang ierr = ISGetLocalSize(is[i],&n);CHKERRQ(ierr); 37d94109b8SHong Zhang 38d94109b8SHong Zhang /* Enter these into the temp arrays i.e mark table[brow], enter brow into new index */ 39dbe03f88SHong Zhang bcol_max = 0; 40d94109b8SHong Zhang for (j=0; j<n ; ++j){ 41d94109b8SHong Zhang brow = idx[j]/bs; /* convert the indices into block indices */ 42e32f2f54SBarry Smith if (brow >= mbs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"index greater than mat-dim"); 43dbe03f88SHong Zhang if(!PetscBTLookupSet(table,brow)) { 44dbe03f88SHong Zhang nidx[isz++] = brow; 45dbe03f88SHong Zhang if (bcol_max < brow) bcol_max = brow; 46dbe03f88SHong Zhang } 47d94109b8SHong Zhang } 48d94109b8SHong Zhang ierr = ISRestoreIndices(is[i],&idx);CHKERRQ(ierr); 49d94109b8SHong Zhang ierr = ISDestroy(is[i]);CHKERRQ(ierr); 50d94109b8SHong Zhang 51d94109b8SHong Zhang k = 0; 52d94109b8SHong Zhang for (j=0; j<ov; j++){ /* for each overlap */ 53d94109b8SHong Zhang /* set table0 for lookup - only mark entries that are added onto nidx in (j-1)-th overlap */ 54d94109b8SHong Zhang ierr = PetscBTMemzero(mbs,table0);CHKERRQ(ierr); 55efee365bSSatish Balay for (l=k; l<isz; l++) { ierr = PetscBTSet(table0,nidx[l]);CHKERRQ(ierr); } 56d94109b8SHong Zhang 57d94109b8SHong Zhang n = isz; /* length of the updated is[i] */ 58d94109b8SHong Zhang for (brow=0; brow<mbs; brow++){ 59d94109b8SHong Zhang start = ai[brow]; end = ai[brow+1]; 60d94109b8SHong Zhang if (PetscBTLookup(table0,brow)){ /* brow is on nidx - row search: collect all bcol in this brow */ 61d94109b8SHong Zhang for (l = start; l<end ; l++){ 62d94109b8SHong Zhang bcol = aj[l]; 63d94109b8SHong Zhang if (!PetscBTLookupSet(table,bcol)) {nidx[isz++] = bcol;} 64d94109b8SHong Zhang } 65d94109b8SHong Zhang k++; 66d94109b8SHong Zhang if (k >= n) break; /* for (brow=0; brow<mbs; brow++) */ 67d94109b8SHong Zhang } else { /* brow is not on nidx - col serach: add brow onto nidx if there is a bcol in nidx */ 68d94109b8SHong Zhang for (l = start; l<end ; l++){ 69d94109b8SHong Zhang bcol = aj[l]; 70dbe03f88SHong Zhang if (bcol > bcol_max) break; 71d94109b8SHong Zhang if (PetscBTLookup(table0,bcol)){ 72d94109b8SHong Zhang if (!PetscBTLookupSet(table,brow)) {nidx[isz++] = brow;} 73d94109b8SHong Zhang break; /* for l = start; l<end ; l++) */ 74d94109b8SHong Zhang } 75d94109b8SHong Zhang } 76d94109b8SHong Zhang } 77d94109b8SHong Zhang } 78d94109b8SHong Zhang } /* for each overlap */ 79d94109b8SHong Zhang 80d94109b8SHong Zhang /* expand the Index Set */ 81d94109b8SHong Zhang for (j=0; j<isz; j++) { 82d94109b8SHong Zhang for (k=0; k<bs; k++) 83d94109b8SHong Zhang nidx2[j*bs+k] = nidx[j]*bs+k; 84d94109b8SHong Zhang } 8570b3c8c7SBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,isz*bs,nidx2,PETSC_COPY_VALUES,is+i);CHKERRQ(ierr); 86d94109b8SHong Zhang } 87d94109b8SHong Zhang ierr = PetscBTDestroy(table);CHKERRQ(ierr); 88d94109b8SHong Zhang ierr = PetscFree(nidx);CHKERRQ(ierr); 89d94109b8SHong Zhang ierr = PetscFree(nidx2);CHKERRQ(ierr); 90d94109b8SHong Zhang ierr = PetscBTDestroy(table0);CHKERRQ(ierr); 915eee224dSHong Zhang PetscFunctionReturn(0); 9249b5e25fSSatish Balay } 9349b5e25fSSatish Balay 944a2ae208SSatish Balay #undef __FUNCT__ 954a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqSBAIJ_Private" 964aa3045dSJed Brown PetscErrorCode MatGetSubMatrix_SeqSBAIJ_Private(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 9749b5e25fSSatish Balay { 9849b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*c; 996849ba73SBarry Smith PetscErrorCode ierr; 10013f74950SBarry Smith PetscInt *smap,i,k,kstart,kend,oldcols = a->mbs,*lens; 10113f74950SBarry Smith PetscInt row,mat_i,*mat_j,tcol,*mat_ilen; 1025d0c19d7SBarry Smith PetscInt nrows,*ssmap,bs=A->rmap->bs,bs2=a->bs2; 1035d0c19d7SBarry Smith const PetscInt *irow,*aj = a->j,*ai = a->i; 10449b5e25fSSatish Balay MatScalar *mat_a; 10549b5e25fSSatish Balay Mat C; 106ace3abfcSBarry Smith PetscBool flag,sorted; 10749b5e25fSSatish Balay 10849b5e25fSSatish Balay PetscFunctionBegin; 109e32f2f54SBarry Smith if (isrow != iscol) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"For symmetric format, iscol must equal isro"); 11014ca34e6SBarry Smith ierr = ISSorted(iscol,&sorted);CHKERRQ(ierr); 111e32f2f54SBarry Smith if (!sorted) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"IS is not sorted"); 11249b5e25fSSatish Balay 11349b5e25fSSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 11449b5e25fSSatish Balay ierr = ISGetSize(isrow,&nrows);CHKERRQ(ierr); 11549b5e25fSSatish Balay 11674ed9c26SBarry Smith ierr = PetscMalloc(oldcols*sizeof(PetscInt),&smap);CHKERRQ(ierr); 11774ed9c26SBarry Smith ierr = PetscMemzero(smap,oldcols*sizeof(PetscInt));CHKERRQ(ierr); 11849b5e25fSSatish Balay ssmap = smap; 11913f74950SBarry Smith ierr = PetscMalloc((1+nrows)*sizeof(PetscInt),&lens);CHKERRQ(ierr); 12049b5e25fSSatish Balay for (i=0; i<nrows; i++) smap[irow[i]] = i+1; /* nrows = ncols */ 12149b5e25fSSatish Balay /* determine lens of each row */ 12249b5e25fSSatish Balay for (i=0; i<nrows; i++) { 12349b5e25fSSatish Balay kstart = ai[irow[i]]; 12449b5e25fSSatish Balay kend = kstart + a->ilen[irow[i]]; 12549b5e25fSSatish Balay lens[i] = 0; 12649b5e25fSSatish Balay for (k=kstart; k<kend; k++) { 12749b5e25fSSatish Balay if (ssmap[aj[k]]) { 12849b5e25fSSatish Balay lens[i]++; 12949b5e25fSSatish Balay } 13049b5e25fSSatish Balay } 13149b5e25fSSatish Balay } 13249b5e25fSSatish Balay /* Create and fill new matrix */ 13349b5e25fSSatish Balay if (scall == MAT_REUSE_MATRIX) { 13449b5e25fSSatish Balay c = (Mat_SeqSBAIJ *)((*B)->data); 13549b5e25fSSatish Balay 136e32f2f54SBarry Smith if (c->mbs!=nrows || (*B)->rmap->bs!=bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Submatrix wrong size"); 13713f74950SBarry Smith ierr = PetscMemcmp(c->ilen,lens,c->mbs *sizeof(PetscInt),&flag);CHKERRQ(ierr); 138e7e72b3dSBarry Smith if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Cannot reuse matrix. wrong no of nonzeros"); 13913f74950SBarry Smith ierr = PetscMemzero(c->ilen,c->mbs*sizeof(PetscInt));CHKERRQ(ierr); 14049b5e25fSSatish Balay C = *B; 14149b5e25fSSatish Balay } else { 1427adad957SLisandro Dalcin ierr = MatCreate(((PetscObject)A)->comm,&C);CHKERRQ(ierr); 143f69a0ea3SMatthew Knepley ierr = MatSetSizes(C,nrows*bs,nrows*bs,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 1447adad957SLisandro Dalcin ierr = MatSetType(C,((PetscObject)A)->type_name);CHKERRQ(ierr); 145ab93d7beSBarry Smith ierr = MatSeqSBAIJSetPreallocation_SeqSBAIJ(C,bs,0,lens);CHKERRQ(ierr); 14649b5e25fSSatish Balay } 14749b5e25fSSatish Balay c = (Mat_SeqSBAIJ *)(C->data); 14849b5e25fSSatish Balay for (i=0; i<nrows; i++) { 14949b5e25fSSatish Balay row = irow[i]; 15049b5e25fSSatish Balay kstart = ai[row]; 15149b5e25fSSatish Balay kend = kstart + a->ilen[row]; 15249b5e25fSSatish Balay mat_i = c->i[i]; 15349b5e25fSSatish Balay mat_j = c->j + mat_i; 15449b5e25fSSatish Balay mat_a = c->a + mat_i*bs2; 15549b5e25fSSatish Balay mat_ilen = c->ilen + i; 15649b5e25fSSatish Balay for (k=kstart; k<kend; k++) { 15749b5e25fSSatish Balay if ((tcol=ssmap[a->j[k]])) { 15849b5e25fSSatish Balay *mat_j++ = tcol - 1; 15949b5e25fSSatish Balay ierr = PetscMemcpy(mat_a,a->a+k*bs2,bs2*sizeof(MatScalar));CHKERRQ(ierr); 16049b5e25fSSatish Balay mat_a += bs2; 16149b5e25fSSatish Balay (*mat_ilen)++; 16249b5e25fSSatish Balay } 16349b5e25fSSatish Balay } 16449b5e25fSSatish Balay } 16549b5e25fSSatish Balay 16649b5e25fSSatish Balay /* Free work space */ 16749b5e25fSSatish Balay ierr = PetscFree(smap);CHKERRQ(ierr); 16849b5e25fSSatish Balay ierr = PetscFree(lens);CHKERRQ(ierr); 16949b5e25fSSatish Balay ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 17049b5e25fSSatish Balay ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 17149b5e25fSSatish Balay 17249b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 17349b5e25fSSatish Balay *B = C; 17449b5e25fSSatish Balay PetscFunctionReturn(0); 17549b5e25fSSatish Balay } 17649b5e25fSSatish Balay 1774a2ae208SSatish Balay #undef __FUNCT__ 1784a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqSBAIJ" 1794aa3045dSJed Brown PetscErrorCode MatGetSubMatrix_SeqSBAIJ(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 18049b5e25fSSatish Balay { 18149b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 18249b5e25fSSatish Balay IS is1; 1836849ba73SBarry Smith PetscErrorCode ierr; 1845d0c19d7SBarry Smith PetscInt *vary,*iary,nrows,i,bs=A->rmap->bs,count; 1855d0c19d7SBarry Smith const PetscInt *irow; 18649b5e25fSSatish Balay 18749b5e25fSSatish Balay PetscFunctionBegin; 188e32f2f54SBarry Smith if (isrow != iscol) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"For symmetric format, iscol must equal isro"); 18949b5e25fSSatish Balay 19049b5e25fSSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 19149b5e25fSSatish Balay ierr = ISGetSize(isrow,&nrows);CHKERRQ(ierr); 19249b5e25fSSatish Balay 19349b5e25fSSatish Balay /* Verify if the indices corespond to each element in a block 19449b5e25fSSatish Balay and form the IS with compressed IS */ 19574ed9c26SBarry Smith ierr = PetscMalloc2(a->mbs,PetscInt,&vary,a->mbs,PetscInt,&iary);CHKERRQ(ierr); 19674ed9c26SBarry Smith ierr = PetscMemzero(vary,a->mbs*sizeof(PetscInt));CHKERRQ(ierr); 19749b5e25fSSatish Balay for (i=0; i<nrows; i++) vary[irow[i]/bs]++; 19849b5e25fSSatish Balay 19949b5e25fSSatish Balay count = 0; 20049b5e25fSSatish Balay for (i=0; i<a->mbs; i++) { 201e32f2f54SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Index set does not match blocks"); 20249b5e25fSSatish Balay if (vary[i]==bs) iary[count++] = i; 20349b5e25fSSatish Balay } 20449b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 20570b3c8c7SBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,PETSC_COPY_VALUES,&is1);CHKERRQ(ierr); 20674ed9c26SBarry Smith ierr = PetscFree2(vary,iary);CHKERRQ(ierr); 20749b5e25fSSatish Balay 2084aa3045dSJed Brown ierr = MatGetSubMatrix_SeqSBAIJ_Private(A,is1,is1,scall,B);CHKERRQ(ierr); 20974ed9c26SBarry Smith ierr = ISDestroy(is1);CHKERRQ(ierr); 21049b5e25fSSatish Balay PetscFunctionReturn(0); 21149b5e25fSSatish Balay } 21249b5e25fSSatish Balay 2134a2ae208SSatish Balay #undef __FUNCT__ 2144a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrices_SeqSBAIJ" 21513f74950SBarry Smith PetscErrorCode MatGetSubMatrices_SeqSBAIJ(Mat A,PetscInt n,const IS irow[],const IS icol[],MatReuse scall,Mat *B[]) 21649b5e25fSSatish Balay { 2176849ba73SBarry Smith PetscErrorCode ierr; 21813f74950SBarry Smith PetscInt i; 21949b5e25fSSatish Balay 22049b5e25fSSatish Balay PetscFunctionBegin; 22149b5e25fSSatish Balay if (scall == MAT_INITIAL_MATRIX) { 22282502324SSatish Balay ierr = PetscMalloc((n+1)*sizeof(Mat),B);CHKERRQ(ierr); 22349b5e25fSSatish Balay } 22449b5e25fSSatish Balay 22549b5e25fSSatish Balay for (i=0; i<n; i++) { 2264aa3045dSJed Brown ierr = MatGetSubMatrix_SeqSBAIJ(A,irow[i],icol[i],scall,&(*B)[i]);CHKERRQ(ierr); 22749b5e25fSSatish Balay } 22849b5e25fSSatish Balay PetscFunctionReturn(0); 22949b5e25fSSatish Balay } 23049b5e25fSSatish Balay 23149b5e25fSSatish Balay /* -------------------------------------------------------*/ 23249b5e25fSSatish Balay /* Should check that shapes of vectors and matrices match */ 23349b5e25fSSatish Balay /* -------------------------------------------------------*/ 23449b5e25fSSatish Balay 2354a2ae208SSatish Balay #undef __FUNCT__ 2364a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqSBAIJ_2" 237dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_2(Mat A,Vec xx,Vec zz) 23849b5e25fSSatish Balay { 23949b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 24087828ca2SBarry Smith PetscScalar *x,*z,*xb,x1,x2,zero=0.0; 24149b5e25fSSatish Balay MatScalar *v; 2426849ba73SBarry Smith PetscErrorCode ierr; 24313f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 24498c9bda7SSatish Balay PetscInt nonzerorow=0; 24549b5e25fSSatish Balay 24649b5e25fSSatish Balay PetscFunctionBegin; 2472dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 2481ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2491ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 25049b5e25fSSatish Balay 25149b5e25fSSatish Balay v = a->a; 25249b5e25fSSatish Balay xb = x; 25349b5e25fSSatish Balay 25449b5e25fSSatish Balay for (i=0; i<mbs; i++) { 25549b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 25649b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; 25749b5e25fSSatish Balay ib = aj + *ai; 258831a3094SHong Zhang jmin = 0; 25998c9bda7SSatish Balay nonzerorow += (n>0); 2607fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 26149b5e25fSSatish Balay z[2*i] += v[0]*x1 + v[2]*x2; 26249b5e25fSSatish Balay z[2*i+1] += v[2]*x1 + v[3]*x2; 263831a3094SHong Zhang v += 4; jmin++; 2647fbae186SHong Zhang } 265*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 266*444d8c10SJed Brown PetscPrefetchBlock(v+4*n,4*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 267831a3094SHong Zhang for (j=jmin; j<n; j++) { 26849b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 26949b5e25fSSatish Balay cval = ib[j]*2; 27049b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2; 27149b5e25fSSatish Balay z[cval+1] += v[2]*x1 + v[3]*x2; 27249b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 27349b5e25fSSatish Balay z[2*i] += v[0]*x[cval] + v[2]*x[cval+1]; 27449b5e25fSSatish Balay z[2*i+1] += v[1]*x[cval] + v[3]*x[cval+1]; 27549b5e25fSSatish Balay v += 4; 27649b5e25fSSatish Balay } 27749b5e25fSSatish Balay xb +=2; ai++; 27849b5e25fSSatish Balay } 27949b5e25fSSatish Balay 2801ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2811ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 282dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 28349b5e25fSSatish Balay PetscFunctionReturn(0); 28449b5e25fSSatish Balay } 28549b5e25fSSatish Balay 2864a2ae208SSatish Balay #undef __FUNCT__ 2874a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqSBAIJ_3" 288dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_3(Mat A,Vec xx,Vec zz) 28949b5e25fSSatish Balay { 29049b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 29187828ca2SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,zero=0.0; 29249b5e25fSSatish Balay MatScalar *v; 2936849ba73SBarry Smith PetscErrorCode ierr; 29413f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 29598c9bda7SSatish Balay PetscInt nonzerorow=0; 29649b5e25fSSatish Balay 29749b5e25fSSatish Balay PetscFunctionBegin; 2982dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 2991ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3001ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 30149b5e25fSSatish Balay 30249b5e25fSSatish Balay v = a->a; 30349b5e25fSSatish Balay xb = x; 30449b5e25fSSatish Balay 30549b5e25fSSatish Balay for (i=0; i<mbs; i++) { 30649b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 30749b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 30849b5e25fSSatish Balay ib = aj + *ai; 309831a3094SHong Zhang jmin = 0; 31098c9bda7SSatish Balay nonzerorow += (n>0); 3117fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 31249b5e25fSSatish Balay z[3*i] += v[0]*x1 + v[3]*x2 + v[6]*x3; 31349b5e25fSSatish Balay z[3*i+1] += v[3]*x1 + v[4]*x2 + v[7]*x3; 31449b5e25fSSatish Balay z[3*i+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 315831a3094SHong Zhang v += 9; jmin++; 3167fbae186SHong Zhang } 317*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 318*444d8c10SJed Brown PetscPrefetchBlock(v+9*n,9*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 319831a3094SHong Zhang for (j=jmin; j<n; j++) { 32049b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 32149b5e25fSSatish Balay cval = ib[j]*3; 32249b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3; 32349b5e25fSSatish Balay z[cval+1] += v[3]*x1 + v[4]*x2 + v[5]*x3; 32449b5e25fSSatish Balay z[cval+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 32549b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 32649b5e25fSSatish Balay z[3*i] += v[0]*x[cval] + v[3]*x[cval+1]+ v[6]*x[cval+2]; 32749b5e25fSSatish Balay z[3*i+1] += v[1]*x[cval] + v[4]*x[cval+1]+ v[7]*x[cval+2]; 32849b5e25fSSatish Balay z[3*i+2] += v[2]*x[cval] + v[5]*x[cval+1]+ v[8]*x[cval+2]; 32949b5e25fSSatish Balay v += 9; 33049b5e25fSSatish Balay } 33149b5e25fSSatish Balay xb +=3; ai++; 33249b5e25fSSatish Balay } 33349b5e25fSSatish Balay 3341ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3351ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 336dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 33749b5e25fSSatish Balay PetscFunctionReturn(0); 33849b5e25fSSatish Balay } 33949b5e25fSSatish Balay 3404a2ae208SSatish Balay #undef __FUNCT__ 3414a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqSBAIJ_4" 342dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_4(Mat A,Vec xx,Vec zz) 34349b5e25fSSatish Balay { 34449b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 34587828ca2SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4,zero=0.0; 34649b5e25fSSatish Balay MatScalar *v; 3476849ba73SBarry Smith PetscErrorCode ierr; 34813f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 34998c9bda7SSatish Balay PetscInt nonzerorow=0; 35049b5e25fSSatish Balay 35149b5e25fSSatish Balay PetscFunctionBegin; 3522dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 3531ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3541ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 35549b5e25fSSatish Balay 35649b5e25fSSatish Balay v = a->a; 35749b5e25fSSatish Balay xb = x; 35849b5e25fSSatish Balay 35949b5e25fSSatish Balay for (i=0; i<mbs; i++) { 36049b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 36149b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 36249b5e25fSSatish Balay ib = aj + *ai; 363831a3094SHong Zhang jmin = 0; 36498c9bda7SSatish Balay nonzerorow += (n>0); 3657fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 36649b5e25fSSatish Balay z[4*i] += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 36749b5e25fSSatish Balay z[4*i+1] += v[4]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 36849b5e25fSSatish Balay z[4*i+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[14]*x4; 36949b5e25fSSatish Balay z[4*i+3] += v[12]*x1+ v[13]*x2+ v[14]*x3 + v[15]*x4; 370831a3094SHong Zhang v += 16; jmin++; 3717fbae186SHong Zhang } 372*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 373*444d8c10SJed Brown PetscPrefetchBlock(v+16*n,16*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 374831a3094SHong Zhang for (j=jmin; j<n; j++) { 37549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 37649b5e25fSSatish Balay cval = ib[j]*4; 37749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 37849b5e25fSSatish Balay z[cval+1] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 37949b5e25fSSatish Balay z[cval+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 38049b5e25fSSatish Balay z[cval+3] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 38149b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 38249b5e25fSSatish Balay z[4*i] += v[0]*x[cval] + v[4]*x[cval+1]+ v[8]*x[cval+2] + v[12]*x[cval+3]; 38349b5e25fSSatish Balay z[4*i+1] += v[1]*x[cval] + v[5]*x[cval+1]+ v[9]*x[cval+2] + v[13]*x[cval+3]; 38449b5e25fSSatish Balay z[4*i+2] += v[2]*x[cval] + v[6]*x[cval+1]+ v[10]*x[cval+2]+ v[14]*x[cval+3]; 38549b5e25fSSatish Balay z[4*i+3] += v[3]*x[cval] + v[7]*x[cval+1]+ v[11]*x[cval+2]+ v[15]*x[cval+3]; 38649b5e25fSSatish Balay v += 16; 38749b5e25fSSatish Balay } 38849b5e25fSSatish Balay xb +=4; ai++; 38949b5e25fSSatish Balay } 39049b5e25fSSatish Balay 3911ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 3921ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 393dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 39449b5e25fSSatish Balay PetscFunctionReturn(0); 39549b5e25fSSatish Balay } 39649b5e25fSSatish Balay 3974a2ae208SSatish Balay #undef __FUNCT__ 3984a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqSBAIJ_5" 399dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_5(Mat A,Vec xx,Vec zz) 40049b5e25fSSatish Balay { 40149b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 40287828ca2SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4,x5,zero=0.0; 40349b5e25fSSatish Balay MatScalar *v; 4046849ba73SBarry Smith PetscErrorCode ierr; 40513f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 40698c9bda7SSatish Balay PetscInt nonzerorow=0; 40749b5e25fSSatish Balay 40849b5e25fSSatish Balay PetscFunctionBegin; 4092dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 4101ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 4111ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 41249b5e25fSSatish Balay 41349b5e25fSSatish Balay v = a->a; 41449b5e25fSSatish Balay xb = x; 41549b5e25fSSatish Balay 41649b5e25fSSatish Balay for (i=0; i<mbs; i++) { 41749b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 41849b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; 41949b5e25fSSatish Balay ib = aj + *ai; 420831a3094SHong Zhang jmin = 0; 42198c9bda7SSatish Balay nonzerorow += (n>0); 4227fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 42349b5e25fSSatish Balay z[5*i] += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4+ v[20]*x5; 42449b5e25fSSatish Balay z[5*i+1] += v[5]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4+ v[21]*x5; 42549b5e25fSSatish Balay z[5*i+2] += v[10]*x1 +v[11]*x2 + v[12]*x3 + v[17]*x4+ v[22]*x5; 42649b5e25fSSatish Balay z[5*i+3] += v[15]*x1 +v[16]*x2 + v[17]*x3 + v[18]*x4+ v[23]*x5; 42749b5e25fSSatish Balay z[5*i+4] += v[20]*x1 +v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 428831a3094SHong Zhang v += 25; jmin++; 4297fbae186SHong Zhang } 430*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 431*444d8c10SJed Brown PetscPrefetchBlock(v+25*n,25*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 432831a3094SHong Zhang for (j=jmin; j<n; j++) { 43349b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 43449b5e25fSSatish Balay cval = ib[j]*5; 43549b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 43649b5e25fSSatish Balay z[cval+1] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 43749b5e25fSSatish Balay z[cval+2] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4+ v[14]*x5; 43849b5e25fSSatish Balay z[cval+3] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4+ v[19]*x5; 43949b5e25fSSatish Balay z[cval+4] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 44049b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 44149b5e25fSSatish Balay z[5*i] +=v[0]*x[cval]+v[5]*x[cval+1]+v[10]*x[cval+2]+v[15]*x[cval+3]+v[20]*x[cval+4]; 44249b5e25fSSatish Balay z[5*i+1] +=v[1]*x[cval]+v[6]*x[cval+1]+v[11]*x[cval+2]+v[16]*x[cval+3]+v[21]*x[cval+4]; 44349b5e25fSSatish Balay z[5*i+2] +=v[2]*x[cval]+v[7]*x[cval+1]+v[12]*x[cval+2]+v[17]*x[cval+3]+v[22]*x[cval+4]; 44449b5e25fSSatish Balay z[5*i+3] +=v[3]*x[cval]+v[8]*x[cval+1]+v[13]*x[cval+2]+v[18]*x[cval+3]+v[23]*x[cval+4]; 44549b5e25fSSatish Balay z[5*i+4] +=v[4]*x[cval]+v[9]*x[cval+1]+v[14]*x[cval+2]+v[19]*x[cval+3]+v[24]*x[cval+4]; 44649b5e25fSSatish Balay v += 25; 44749b5e25fSSatish Balay } 44849b5e25fSSatish Balay xb +=5; ai++; 44949b5e25fSSatish Balay } 45049b5e25fSSatish Balay 4511ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 4521ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 453dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 45449b5e25fSSatish Balay PetscFunctionReturn(0); 45549b5e25fSSatish Balay } 45649b5e25fSSatish Balay 45749b5e25fSSatish Balay 4584a2ae208SSatish Balay #undef __FUNCT__ 4594a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqSBAIJ_6" 460dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_6(Mat A,Vec xx,Vec zz) 46149b5e25fSSatish Balay { 46249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 46387828ca2SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4,x5,x6,zero=0.0; 46449b5e25fSSatish Balay MatScalar *v; 4656849ba73SBarry Smith PetscErrorCode ierr; 46613f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 46798c9bda7SSatish Balay PetscInt nonzerorow=0; 46849b5e25fSSatish Balay 46949b5e25fSSatish Balay PetscFunctionBegin; 4702dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 4711ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 4721ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 47349b5e25fSSatish Balay 47449b5e25fSSatish Balay v = a->a; 47549b5e25fSSatish Balay xb = x; 47649b5e25fSSatish Balay 47749b5e25fSSatish Balay for (i=0; i<mbs; i++) { 47849b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 47949b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; 48049b5e25fSSatish Balay ib = aj + *ai; 481831a3094SHong Zhang jmin = 0; 48298c9bda7SSatish Balay nonzerorow += (n>0); 4837fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 48449b5e25fSSatish Balay z[6*i] += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4+ v[24]*x5 + v[30]*x6; 48549b5e25fSSatish Balay z[6*i+1] += v[6]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4+ v[25]*x5 + v[31]*x6; 48649b5e25fSSatish Balay z[6*i+2] += v[12]*x1 +v[13]*x2 + v[14]*x3 + v[20]*x4+ v[26]*x5 + v[32]*x6; 48749b5e25fSSatish Balay z[6*i+3] += v[18]*x1 +v[19]*x2 + v[20]*x3 + v[21]*x4+ v[27]*x5 + v[33]*x6; 48849b5e25fSSatish Balay z[6*i+4] += v[24]*x1 +v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[34]*x6; 48949b5e25fSSatish Balay z[6*i+5] += v[30]*x1 +v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 490831a3094SHong Zhang v += 36; jmin++; 4917fbae186SHong Zhang } 492*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 493*444d8c10SJed Brown PetscPrefetchBlock(v+36*n,36*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 494831a3094SHong Zhang for (j=jmin; j<n; j++) { 49549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 49649b5e25fSSatish Balay cval = ib[j]*6; 49749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6; 49849b5e25fSSatish Balay z[cval+1] += v[6]*x1 + v[7]*x2 + v[8]*x3 + v[9]*x4+ v[10]*x5 + v[11]*x6; 49949b5e25fSSatish Balay z[cval+2] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4+ v[16]*x5 + v[17]*x6; 50049b5e25fSSatish Balay z[cval+3] += v[18]*x1 + v[19]*x2 + v[20]*x3 + v[21]*x4+ v[22]*x5 + v[23]*x6; 50149b5e25fSSatish Balay z[cval+4] += v[24]*x1 + v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[29]*x6; 50249b5e25fSSatish Balay z[cval+5] += v[30]*x1 + v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 50349b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 50449b5e25fSSatish Balay z[6*i] +=v[0]*x[cval]+v[6]*x[cval+1]+v[12]*x[cval+2]+v[18]*x[cval+3]+v[24]*x[cval+4]+v[30]*x[cval+5]; 50549b5e25fSSatish Balay z[6*i+1] +=v[1]*x[cval]+v[7]*x[cval+1]+v[13]*x[cval+2]+v[19]*x[cval+3]+v[25]*x[cval+4]+v[31]*x[cval+5]; 50649b5e25fSSatish Balay z[6*i+2] +=v[2]*x[cval]+v[8]*x[cval+1]+v[14]*x[cval+2]+v[20]*x[cval+3]+v[26]*x[cval+4]+v[32]*x[cval+5]; 50749b5e25fSSatish Balay z[6*i+3] +=v[3]*x[cval]+v[9]*x[cval+1]+v[15]*x[cval+2]+v[21]*x[cval+3]+v[27]*x[cval+4]+v[33]*x[cval+5]; 50849b5e25fSSatish Balay z[6*i+4] +=v[4]*x[cval]+v[10]*x[cval+1]+v[16]*x[cval+2]+v[22]*x[cval+3]+v[28]*x[cval+4]+v[34]*x[cval+5]; 50949b5e25fSSatish Balay z[6*i+5] +=v[5]*x[cval]+v[11]*x[cval+1]+v[17]*x[cval+2]+v[23]*x[cval+3]+v[29]*x[cval+4]+v[35]*x[cval+5]; 51049b5e25fSSatish Balay v += 36; 51149b5e25fSSatish Balay } 51249b5e25fSSatish Balay xb +=6; ai++; 51349b5e25fSSatish Balay } 51449b5e25fSSatish Balay 5151ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 5161ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 517dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 51849b5e25fSSatish Balay PetscFunctionReturn(0); 51949b5e25fSSatish Balay } 5204a2ae208SSatish Balay #undef __FUNCT__ 5214a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqSBAIJ_7" 522dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_7(Mat A,Vec xx,Vec zz) 52349b5e25fSSatish Balay { 52449b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 52587828ca2SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4,x5,x6,x7,zero=0.0; 52649b5e25fSSatish Balay MatScalar *v; 5276849ba73SBarry Smith PetscErrorCode ierr; 52813f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 52998c9bda7SSatish Balay PetscInt nonzerorow=0; 53049b5e25fSSatish Balay 53149b5e25fSSatish Balay PetscFunctionBegin; 5322dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 5331ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 5341ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 53549b5e25fSSatish Balay 53649b5e25fSSatish Balay v = a->a; 53749b5e25fSSatish Balay xb = x; 53849b5e25fSSatish Balay 53949b5e25fSSatish Balay for (i=0; i<mbs; i++) { 54049b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 54149b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; x7=xb[6]; 54249b5e25fSSatish Balay ib = aj + *ai; 543831a3094SHong Zhang jmin = 0; 54498c9bda7SSatish Balay nonzerorow += (n>0); 5457fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 54649b5e25fSSatish Balay z[7*i] += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4+ v[28]*x5 + v[35]*x6+ v[42]*x7; 54749b5e25fSSatish Balay z[7*i+1] += v[7]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4+ v[29]*x5 + v[36]*x6+ v[43]*x7; 54849b5e25fSSatish Balay z[7*i+2] += v[14]*x1+ v[15]*x2 +v[16]*x3 + v[23]*x4+ v[30]*x5 + v[37]*x6+ v[44]*x7; 54949b5e25fSSatish Balay z[7*i+3] += v[21]*x1+ v[22]*x2 +v[23]*x3 + v[24]*x4+ v[31]*x5 + v[38]*x6+ v[45]*x7; 55049b5e25fSSatish Balay z[7*i+4] += v[28]*x1+ v[29]*x2 +v[30]*x3 + v[31]*x4+ v[32]*x5 + v[39]*x6+ v[46]*x7; 55149b5e25fSSatish Balay z[7*i+5] += v[35]*x1+ v[36]*x2 +v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[47]*x7; 55249b5e25fSSatish Balay z[7*i+6] += v[42]*x1+ v[43]*x2 +v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 553831a3094SHong Zhang v += 49; jmin++; 5547fbae186SHong Zhang } 555*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 556*444d8c10SJed Brown PetscPrefetchBlock(v+49*n,49*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 557831a3094SHong Zhang for (j=jmin; j<n; j++) { 55849b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 55949b5e25fSSatish Balay cval = ib[j]*7; 56049b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6+ v[6]*x7; 56149b5e25fSSatish Balay z[cval+1] += v[7]*x1 + v[8]*x2 + v[9]*x3 + v[10]*x4+ v[11]*x5 + v[12]*x6+ v[13]*x7; 56249b5e25fSSatish Balay z[cval+2] += v[14]*x1 + v[15]*x2 + v[16]*x3 + v[17]*x4+ v[18]*x5 + v[19]*x6+ v[20]*x7; 56349b5e25fSSatish Balay z[cval+3] += v[21]*x1 + v[22]*x2 + v[23]*x3 + v[24]*x4+ v[25]*x5 + v[26]*x6+ v[27]*x7; 56449b5e25fSSatish Balay z[cval+4] += v[28]*x1 + v[29]*x2 + v[30]*x3 + v[31]*x4+ v[32]*x5 + v[33]*x6+ v[34]*x7; 56549b5e25fSSatish Balay z[cval+5] += v[35]*x1 + v[36]*x2 + v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[41]*x7; 56649b5e25fSSatish Balay z[cval+6] += v[42]*x1 + v[43]*x2 + v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 56749b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 56849b5e25fSSatish Balay z[7*i] +=v[0]*x[cval]+v[7]*x[cval+1]+v[14]*x[cval+2]+v[21]*x[cval+3]+v[28]*x[cval+4]+v[35]*x[cval+5]+v[42]*x[cval+6]; 56949b5e25fSSatish Balay z[7*i+1]+=v[1]*x[cval]+v[8]*x[cval+1]+v[15]*x[cval+2]+v[22]*x[cval+3]+v[29]*x[cval+4]+v[36]*x[cval+5]+v[43]*x[cval+6]; 57049b5e25fSSatish Balay z[7*i+2]+=v[2]*x[cval]+v[9]*x[cval+1]+v[16]*x[cval+2]+v[23]*x[cval+3]+v[30]*x[cval+4]+v[37]*x[cval+5]+v[44]*x[cval+6]; 57149b5e25fSSatish Balay z[7*i+3]+=v[3]*x[cval]+v[10]*x[cval+1]+v[17]*x[cval+2]+v[24]*x[cval+3]+v[31]*x[cval+4]+v[38]*x[cval+5]+v[45]*x[cval+6]; 57249b5e25fSSatish Balay z[7*i+4]+=v[4]*x[cval]+v[11]*x[cval+1]+v[18]*x[cval+2]+v[25]*x[cval+3]+v[32]*x[cval+4]+v[39]*x[cval+5]+v[46]*x[cval+6]; 57349b5e25fSSatish Balay z[7*i+5]+=v[5]*x[cval]+v[12]*x[cval+1]+v[19]*x[cval+2]+v[26]*x[cval+3]+v[33]*x[cval+4]+v[40]*x[cval+5]+v[47]*x[cval+6]; 57449b5e25fSSatish Balay z[7*i+6]+=v[6]*x[cval]+v[13]*x[cval+1]+v[20]*x[cval+2]+v[27]*x[cval+3]+v[34]*x[cval+4]+v[41]*x[cval+5]+v[48]*x[cval+6]; 57549b5e25fSSatish Balay v += 49; 57649b5e25fSSatish Balay } 57749b5e25fSSatish Balay xb +=7; ai++; 57849b5e25fSSatish Balay } 5791ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 5801ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 581dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 58249b5e25fSSatish Balay PetscFunctionReturn(0); 58349b5e25fSSatish Balay } 58449b5e25fSSatish Balay 58549b5e25fSSatish Balay /* 58649b5e25fSSatish Balay This will not work with MatScalar == float because it calls the BLAS 58749b5e25fSSatish Balay */ 5884a2ae208SSatish Balay #undef __FUNCT__ 5894a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqSBAIJ_N" 590dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_N(Mat A,Vec xx,Vec zz) 59149b5e25fSSatish Balay { 59249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 59387828ca2SBarry Smith PetscScalar *x,*x_ptr,*z,*z_ptr,*xb,*zb,*work,*workt,zero=0.0; 5940b60a74dSHong Zhang MatScalar *v; 595dfbe8321SBarry Smith PetscErrorCode ierr; 596d0f46423SBarry Smith PetscInt mbs=a->mbs,i,*idx,*aj,*ii,bs=A->rmap->bs,j,n,bs2=a->bs2,ncols,k; 59798c9bda7SSatish Balay PetscInt nonzerorow=0; 59849b5e25fSSatish Balay 59949b5e25fSSatish Balay PetscFunctionBegin; 6002dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 6011ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); x_ptr=x; 6021ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); z_ptr=z; 60349b5e25fSSatish Balay 60449b5e25fSSatish Balay aj = a->j; 60549b5e25fSSatish Balay v = a->a; 60649b5e25fSSatish Balay ii = a->i; 60749b5e25fSSatish Balay 60849b5e25fSSatish Balay if (!a->mult_work) { 609d0f46423SBarry Smith ierr = PetscMalloc((A->rmap->N+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 61049b5e25fSSatish Balay } 61149b5e25fSSatish Balay work = a->mult_work; 61249b5e25fSSatish Balay 61349b5e25fSSatish Balay for (i=0; i<mbs; i++) { 61449b5e25fSSatish Balay n = ii[1] - ii[0]; ncols = n*bs; 61549b5e25fSSatish Balay workt = work; idx=aj+ii[0]; 61698c9bda7SSatish Balay nonzerorow += (n>0); 61749b5e25fSSatish Balay 61849b5e25fSSatish Balay /* upper triangular part */ 61949b5e25fSSatish Balay for (j=0; j<n; j++) { 62049b5e25fSSatish Balay xb = x_ptr + bs*(*idx++); 62149b5e25fSSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 62249b5e25fSSatish Balay workt += bs; 62349b5e25fSSatish Balay } 62449b5e25fSSatish Balay /* z(i*bs:(i+1)*bs-1) += A(i,:)*x */ 62549b5e25fSSatish Balay Kernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 62649b5e25fSSatish Balay 62749b5e25fSSatish Balay /* strict lower triangular part */ 628831a3094SHong Zhang idx = aj+ii[0]; 629831a3094SHong Zhang if (*idx == i){ 63096b9376eSHong Zhang ncols -= bs; v += bs2; idx++; n--; 631831a3094SHong Zhang } 63296b9376eSHong Zhang 63349b5e25fSSatish Balay if (ncols > 0){ 63449b5e25fSSatish Balay workt = work; 63587828ca2SBarry Smith ierr = PetscMemzero(workt,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 636831a3094SHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,x,v,workt); 637831a3094SHong Zhang for (j=0; j<n; j++) { 638831a3094SHong Zhang zb = z_ptr + bs*(*idx++); 63949b5e25fSSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k] ; 64049b5e25fSSatish Balay workt += bs; 64149b5e25fSSatish Balay } 64249b5e25fSSatish Balay } 64349b5e25fSSatish Balay x += bs; v += n*bs2; z += bs; ii++; 64449b5e25fSSatish Balay } 64549b5e25fSSatish Balay 6461ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 6471ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 648dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*(a->nz*2.0 - nonzerorow)*bs2 - nonzerorow);CHKERRQ(ierr); 64949b5e25fSSatish Balay PetscFunctionReturn(0); 65049b5e25fSSatish Balay } 65149b5e25fSSatish Balay 6524a2ae208SSatish Balay #undef __FUNCT__ 6534a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_1" 654dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_1(Mat A,Vec xx,Vec yy,Vec zz) 65549b5e25fSSatish Balay { 65649b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 657bba805e6SBarry Smith PetscScalar *x,*z,*xb,x1; 65849b5e25fSSatish Balay MatScalar *v; 6596849ba73SBarry Smith PetscErrorCode ierr; 66013f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 66198c9bda7SSatish Balay PetscInt nonzerorow=0; 66249b5e25fSSatish Balay 66349b5e25fSSatish Balay PetscFunctionBegin; 664343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 6651ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 6661ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 66749b5e25fSSatish Balay v = a->a; 66849b5e25fSSatish Balay xb = x; 66949b5e25fSSatish Balay 67049b5e25fSSatish Balay for (i=0; i<mbs; i++) { 67149b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th row of A */ 67249b5e25fSSatish Balay x1 = xb[0]; 67349b5e25fSSatish Balay ib = aj + *ai; 674831a3094SHong Zhang jmin = 0; 67598c9bda7SSatish Balay nonzerorow += (n>0); 676831a3094SHong Zhang if (*ib == i) { /* (diag of A)*x */ 677831a3094SHong Zhang z[i] += *v++ * x[*ib++]; jmin++; 678831a3094SHong Zhang } 679831a3094SHong Zhang for (j=jmin; j<n; j++) { 68049b5e25fSSatish Balay cval = *ib; 68149b5e25fSSatish Balay z[cval] += *v * x1; /* (strict lower triangular part of A)*x */ 68249b5e25fSSatish Balay z[i] += *v++ * x[*ib++]; /* (strict upper triangular part of A)*x */ 68349b5e25fSSatish Balay } 68449b5e25fSSatish Balay xb++; ai++; 68549b5e25fSSatish Balay } 68649b5e25fSSatish Balay 6871ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 688bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 68949b5e25fSSatish Balay 690dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 69149b5e25fSSatish Balay PetscFunctionReturn(0); 69249b5e25fSSatish Balay } 69349b5e25fSSatish Balay 6944a2ae208SSatish Balay #undef __FUNCT__ 6954a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_2" 696dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 69749b5e25fSSatish Balay { 69849b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 699bba805e6SBarry Smith PetscScalar *x,*z,*xb,x1,x2; 70049b5e25fSSatish Balay MatScalar *v; 7016849ba73SBarry Smith PetscErrorCode ierr; 70213f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 70398c9bda7SSatish Balay PetscInt nonzerorow=0; 70449b5e25fSSatish Balay 70549b5e25fSSatish Balay PetscFunctionBegin; 706343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 7071ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 7081ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 70949b5e25fSSatish Balay 71049b5e25fSSatish Balay v = a->a; 71149b5e25fSSatish Balay xb = x; 71249b5e25fSSatish Balay 71349b5e25fSSatish Balay for (i=0; i<mbs; i++) { 71449b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 71549b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; 71649b5e25fSSatish Balay ib = aj + *ai; 717831a3094SHong Zhang jmin = 0; 71898c9bda7SSatish Balay nonzerorow += (n>0); 7197fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 72049b5e25fSSatish Balay z[2*i] += v[0]*x1 + v[2]*x2; 72149b5e25fSSatish Balay z[2*i+1] += v[2]*x1 + v[3]*x2; 722831a3094SHong Zhang v += 4; jmin++; 7237fbae186SHong Zhang } 724*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 725*444d8c10SJed Brown PetscPrefetchBlock(v+4*n,4*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 726831a3094SHong Zhang for (j=jmin; j<n; j++) { 72749b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 72849b5e25fSSatish Balay cval = ib[j]*2; 72949b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2; 73049b5e25fSSatish Balay z[cval+1] += v[2]*x1 + v[3]*x2; 73149b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 73249b5e25fSSatish Balay z[2*i] += v[0]*x[cval] + v[2]*x[cval+1]; 73349b5e25fSSatish Balay z[2*i+1] += v[1]*x[cval] + v[3]*x[cval+1]; 73449b5e25fSSatish Balay v += 4; 73549b5e25fSSatish Balay } 73649b5e25fSSatish Balay xb +=2; ai++; 73749b5e25fSSatish Balay } 7381ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 739bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 74049b5e25fSSatish Balay 741dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 74249b5e25fSSatish Balay PetscFunctionReturn(0); 74349b5e25fSSatish Balay } 74449b5e25fSSatish Balay 7454a2ae208SSatish Balay #undef __FUNCT__ 7464a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_3" 747dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 74849b5e25fSSatish Balay { 74949b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 750bba805e6SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3; 75149b5e25fSSatish Balay MatScalar *v; 7526849ba73SBarry Smith PetscErrorCode ierr; 75313f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 75498c9bda7SSatish Balay PetscInt nonzerorow=0; 75549b5e25fSSatish Balay 75649b5e25fSSatish Balay PetscFunctionBegin; 757343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 7581ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 7591ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 76049b5e25fSSatish Balay 76149b5e25fSSatish Balay v = a->a; 76249b5e25fSSatish Balay xb = x; 76349b5e25fSSatish Balay 76449b5e25fSSatish Balay for (i=0; i<mbs; i++) { 76549b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 76649b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 76749b5e25fSSatish Balay ib = aj + *ai; 768831a3094SHong Zhang jmin = 0; 76998c9bda7SSatish Balay nonzerorow += (n>0); 7707fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 77149b5e25fSSatish Balay z[3*i] += v[0]*x1 + v[3]*x2 + v[6]*x3; 77249b5e25fSSatish Balay z[3*i+1] += v[3]*x1 + v[4]*x2 + v[7]*x3; 77349b5e25fSSatish Balay z[3*i+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 774831a3094SHong Zhang v += 9; jmin++; 7757fbae186SHong Zhang } 776*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 777*444d8c10SJed Brown PetscPrefetchBlock(v+9*n,9*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 778831a3094SHong Zhang for (j=jmin; j<n; j++) { 77949b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 78049b5e25fSSatish Balay cval = ib[j]*3; 78149b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3; 78249b5e25fSSatish Balay z[cval+1] += v[3]*x1 + v[4]*x2 + v[5]*x3; 78349b5e25fSSatish Balay z[cval+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 78449b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 78549b5e25fSSatish Balay z[3*i] += v[0]*x[cval] + v[3]*x[cval+1]+ v[6]*x[cval+2]; 78649b5e25fSSatish Balay z[3*i+1] += v[1]*x[cval] + v[4]*x[cval+1]+ v[7]*x[cval+2]; 78749b5e25fSSatish Balay z[3*i+2] += v[2]*x[cval] + v[5]*x[cval+1]+ v[8]*x[cval+2]; 78849b5e25fSSatish Balay v += 9; 78949b5e25fSSatish Balay } 79049b5e25fSSatish Balay xb +=3; ai++; 79149b5e25fSSatish Balay } 79249b5e25fSSatish Balay 7931ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 794bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 79549b5e25fSSatish Balay 796dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 79749b5e25fSSatish Balay PetscFunctionReturn(0); 79849b5e25fSSatish Balay } 79949b5e25fSSatish Balay 8004a2ae208SSatish Balay #undef __FUNCT__ 8014a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_4" 802dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 80349b5e25fSSatish Balay { 80449b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 805bba805e6SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4; 80649b5e25fSSatish Balay MatScalar *v; 8076849ba73SBarry Smith PetscErrorCode ierr; 80813f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 80998c9bda7SSatish Balay PetscInt nonzerorow=0; 81049b5e25fSSatish Balay 81149b5e25fSSatish Balay PetscFunctionBegin; 812343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 8131ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8141ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 81549b5e25fSSatish Balay 81649b5e25fSSatish Balay v = a->a; 81749b5e25fSSatish Balay xb = x; 81849b5e25fSSatish Balay 81949b5e25fSSatish Balay for (i=0; i<mbs; i++) { 82049b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 82149b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 82249b5e25fSSatish Balay ib = aj + *ai; 823831a3094SHong Zhang jmin = 0; 82498c9bda7SSatish Balay nonzerorow += (n>0); 8257fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 82649b5e25fSSatish Balay z[4*i] += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 82749b5e25fSSatish Balay z[4*i+1] += v[4]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 82849b5e25fSSatish Balay z[4*i+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[14]*x4; 82949b5e25fSSatish Balay z[4*i+3] += v[12]*x1+ v[13]*x2+ v[14]*x3 + v[15]*x4; 830831a3094SHong Zhang v += 16; jmin++; 8317fbae186SHong Zhang } 832*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 833*444d8c10SJed Brown PetscPrefetchBlock(v+16*n,16*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 834831a3094SHong Zhang for (j=jmin; j<n; j++) { 83549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 83649b5e25fSSatish Balay cval = ib[j]*4; 83749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 83849b5e25fSSatish Balay z[cval+1] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 83949b5e25fSSatish Balay z[cval+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 84049b5e25fSSatish Balay z[cval+3] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 84149b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 84249b5e25fSSatish Balay z[4*i] += v[0]*x[cval] + v[4]*x[cval+1]+ v[8]*x[cval+2] + v[12]*x[cval+3]; 84349b5e25fSSatish Balay z[4*i+1] += v[1]*x[cval] + v[5]*x[cval+1]+ v[9]*x[cval+2] + v[13]*x[cval+3]; 84449b5e25fSSatish Balay z[4*i+2] += v[2]*x[cval] + v[6]*x[cval+1]+ v[10]*x[cval+2]+ v[14]*x[cval+3]; 84549b5e25fSSatish Balay z[4*i+3] += v[3]*x[cval] + v[7]*x[cval+1]+ v[11]*x[cval+2]+ v[15]*x[cval+3]; 84649b5e25fSSatish Balay v += 16; 84749b5e25fSSatish Balay } 84849b5e25fSSatish Balay xb +=4; ai++; 84949b5e25fSSatish Balay } 85049b5e25fSSatish Balay 8511ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 852bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 85349b5e25fSSatish Balay 854dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 85549b5e25fSSatish Balay PetscFunctionReturn(0); 85649b5e25fSSatish Balay } 85749b5e25fSSatish Balay 8584a2ae208SSatish Balay #undef __FUNCT__ 8594a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_5" 860dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 86149b5e25fSSatish Balay { 86249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 863bba805e6SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4,x5; 86449b5e25fSSatish Balay MatScalar *v; 8656849ba73SBarry Smith PetscErrorCode ierr; 86613f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 86798c9bda7SSatish Balay PetscInt nonzerorow=0; 86849b5e25fSSatish Balay 86949b5e25fSSatish Balay PetscFunctionBegin; 870343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 8711ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 8721ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 87349b5e25fSSatish Balay 87449b5e25fSSatish Balay v = a->a; 87549b5e25fSSatish Balay xb = x; 87649b5e25fSSatish Balay 87749b5e25fSSatish Balay for (i=0; i<mbs; i++) { 87849b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 87949b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; 88049b5e25fSSatish Balay ib = aj + *ai; 881831a3094SHong Zhang jmin = 0; 88298c9bda7SSatish Balay nonzerorow += (n>0); 8837fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 88449b5e25fSSatish Balay z[5*i] += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4+ v[20]*x5; 88549b5e25fSSatish Balay z[5*i+1] += v[5]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4+ v[21]*x5; 88649b5e25fSSatish Balay z[5*i+2] += v[10]*x1 +v[11]*x2 + v[12]*x3 + v[17]*x4+ v[22]*x5; 88749b5e25fSSatish Balay z[5*i+3] += v[15]*x1 +v[16]*x2 + v[17]*x3 + v[18]*x4+ v[23]*x5; 88849b5e25fSSatish Balay z[5*i+4] += v[20]*x1 +v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 889831a3094SHong Zhang v += 25; jmin++; 8907fbae186SHong Zhang } 891*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 892*444d8c10SJed Brown PetscPrefetchBlock(v+25*n,25*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 893831a3094SHong Zhang for (j=jmin; j<n; j++) { 89449b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 89549b5e25fSSatish Balay cval = ib[j]*5; 89649b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 89749b5e25fSSatish Balay z[cval+1] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 89849b5e25fSSatish Balay z[cval+2] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4+ v[14]*x5; 89949b5e25fSSatish Balay z[cval+3] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4+ v[19]*x5; 90049b5e25fSSatish Balay z[cval+4] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 90149b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 90249b5e25fSSatish Balay z[5*i] +=v[0]*x[cval]+v[5]*x[cval+1]+v[10]*x[cval+2]+v[15]*x[cval+3]+v[20]*x[cval+4]; 90349b5e25fSSatish Balay z[5*i+1] +=v[1]*x[cval]+v[6]*x[cval+1]+v[11]*x[cval+2]+v[16]*x[cval+3]+v[21]*x[cval+4]; 90449b5e25fSSatish Balay z[5*i+2] +=v[2]*x[cval]+v[7]*x[cval+1]+v[12]*x[cval+2]+v[17]*x[cval+3]+v[22]*x[cval+4]; 90549b5e25fSSatish Balay z[5*i+3] +=v[3]*x[cval]+v[8]*x[cval+1]+v[13]*x[cval+2]+v[18]*x[cval+3]+v[23]*x[cval+4]; 90649b5e25fSSatish Balay z[5*i+4] +=v[4]*x[cval]+v[9]*x[cval+1]+v[14]*x[cval+2]+v[19]*x[cval+3]+v[24]*x[cval+4]; 90749b5e25fSSatish Balay v += 25; 90849b5e25fSSatish Balay } 90949b5e25fSSatish Balay xb +=5; ai++; 91049b5e25fSSatish Balay } 91149b5e25fSSatish Balay 9121ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 913bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 91449b5e25fSSatish Balay 915dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 91649b5e25fSSatish Balay PetscFunctionReturn(0); 91749b5e25fSSatish Balay } 9184a2ae208SSatish Balay #undef __FUNCT__ 9194a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_6" 920dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 92149b5e25fSSatish Balay { 92249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 923bba805e6SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4,x5,x6; 92449b5e25fSSatish Balay MatScalar *v; 9256849ba73SBarry Smith PetscErrorCode ierr; 92613f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 92798c9bda7SSatish Balay PetscInt nonzerorow=0; 92849b5e25fSSatish Balay 92949b5e25fSSatish Balay PetscFunctionBegin; 930343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 9311ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 9321ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 93349b5e25fSSatish Balay 93449b5e25fSSatish Balay v = a->a; 93549b5e25fSSatish Balay xb = x; 93649b5e25fSSatish Balay 93749b5e25fSSatish Balay for (i=0; i<mbs; i++) { 93849b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 93949b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; 94049b5e25fSSatish Balay ib = aj + *ai; 941831a3094SHong Zhang jmin = 0; 94298c9bda7SSatish Balay nonzerorow += (n>0); 9437fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 94449b5e25fSSatish Balay z[6*i] += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4+ v[24]*x5 + v[30]*x6; 94549b5e25fSSatish Balay z[6*i+1] += v[6]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4+ v[25]*x5 + v[31]*x6; 94649b5e25fSSatish Balay z[6*i+2] += v[12]*x1 +v[13]*x2 + v[14]*x3 + v[20]*x4+ v[26]*x5 + v[32]*x6; 94749b5e25fSSatish Balay z[6*i+3] += v[18]*x1 +v[19]*x2 + v[20]*x3 + v[21]*x4+ v[27]*x5 + v[33]*x6; 94849b5e25fSSatish Balay z[6*i+4] += v[24]*x1 +v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[34]*x6; 94949b5e25fSSatish Balay z[6*i+5] += v[30]*x1 +v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 950831a3094SHong Zhang v += 36; jmin++; 9517fbae186SHong Zhang } 952*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 953*444d8c10SJed Brown PetscPrefetchBlock(v+36*n,36*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 954831a3094SHong Zhang for (j=jmin; j<n; j++) { 95549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 95649b5e25fSSatish Balay cval = ib[j]*6; 95749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6; 95849b5e25fSSatish Balay z[cval+1] += v[6]*x1 + v[7]*x2 + v[8]*x3 + v[9]*x4+ v[10]*x5 + v[11]*x6; 95949b5e25fSSatish Balay z[cval+2] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4+ v[16]*x5 + v[17]*x6; 96049b5e25fSSatish Balay z[cval+3] += v[18]*x1 + v[19]*x2 + v[20]*x3 + v[21]*x4+ v[22]*x5 + v[23]*x6; 96149b5e25fSSatish Balay z[cval+4] += v[24]*x1 + v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[29]*x6; 96249b5e25fSSatish Balay z[cval+5] += v[30]*x1 + v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 96349b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 96449b5e25fSSatish Balay z[6*i] +=v[0]*x[cval]+v[6]*x[cval+1]+v[12]*x[cval+2]+v[18]*x[cval+3]+v[24]*x[cval+4]+v[30]*x[cval+5]; 96549b5e25fSSatish Balay z[6*i+1] +=v[1]*x[cval]+v[7]*x[cval+1]+v[13]*x[cval+2]+v[19]*x[cval+3]+v[25]*x[cval+4]+v[31]*x[cval+5]; 96649b5e25fSSatish Balay z[6*i+2] +=v[2]*x[cval]+v[8]*x[cval+1]+v[14]*x[cval+2]+v[20]*x[cval+3]+v[26]*x[cval+4]+v[32]*x[cval+5]; 96749b5e25fSSatish Balay z[6*i+3] +=v[3]*x[cval]+v[9]*x[cval+1]+v[15]*x[cval+2]+v[21]*x[cval+3]+v[27]*x[cval+4]+v[33]*x[cval+5]; 96849b5e25fSSatish Balay z[6*i+4] +=v[4]*x[cval]+v[10]*x[cval+1]+v[16]*x[cval+2]+v[22]*x[cval+3]+v[28]*x[cval+4]+v[34]*x[cval+5]; 96949b5e25fSSatish Balay z[6*i+5] +=v[5]*x[cval]+v[11]*x[cval+1]+v[17]*x[cval+2]+v[23]*x[cval+3]+v[29]*x[cval+4]+v[35]*x[cval+5]; 97049b5e25fSSatish Balay v += 36; 97149b5e25fSSatish Balay } 97249b5e25fSSatish Balay xb +=6; ai++; 97349b5e25fSSatish Balay } 97449b5e25fSSatish Balay 9751ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 976bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 97749b5e25fSSatish Balay 978dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 97949b5e25fSSatish Balay PetscFunctionReturn(0); 98049b5e25fSSatish Balay } 98149b5e25fSSatish Balay 9824a2ae208SSatish Balay #undef __FUNCT__ 9834a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_7" 984dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 98549b5e25fSSatish Balay { 98649b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 987bba805e6SBarry Smith PetscScalar *x,*z,*xb,x1,x2,x3,x4,x5,x6,x7; 98849b5e25fSSatish Balay MatScalar *v; 9896849ba73SBarry Smith PetscErrorCode ierr; 99013f74950SBarry Smith PetscInt mbs=a->mbs,i,*aj=a->j,*ai=a->i,n,*ib,cval,j,jmin; 99198c9bda7SSatish Balay PetscInt nonzerorow=0; 99249b5e25fSSatish Balay 99349b5e25fSSatish Balay PetscFunctionBegin; 994343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 9951ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 9961ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 99749b5e25fSSatish Balay 99849b5e25fSSatish Balay v = a->a; 99949b5e25fSSatish Balay xb = x; 100049b5e25fSSatish Balay 100149b5e25fSSatish Balay for (i=0; i<mbs; i++) { 100249b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 100349b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; x7=xb[6]; 100449b5e25fSSatish Balay ib = aj + *ai; 1005831a3094SHong Zhang jmin = 0; 100698c9bda7SSatish Balay nonzerorow += (n>0); 10077fbae186SHong Zhang if (*ib == i){ /* (diag of A)*x */ 100849b5e25fSSatish Balay z[7*i] += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4+ v[28]*x5 + v[35]*x6+ v[42]*x7; 100949b5e25fSSatish Balay z[7*i+1] += v[7]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4+ v[29]*x5 + v[36]*x6+ v[43]*x7; 101049b5e25fSSatish Balay z[7*i+2] += v[14]*x1+ v[15]*x2 +v[16]*x3 + v[23]*x4+ v[30]*x5 + v[37]*x6+ v[44]*x7; 101149b5e25fSSatish Balay z[7*i+3] += v[21]*x1+ v[22]*x2 +v[23]*x3 + v[24]*x4+ v[31]*x5 + v[38]*x6+ v[45]*x7; 101249b5e25fSSatish Balay z[7*i+4] += v[28]*x1+ v[29]*x2 +v[30]*x3 + v[31]*x4+ v[32]*x5 + v[39]*x6+ v[46]*x7; 101349b5e25fSSatish Balay z[7*i+5] += v[35]*x1+ v[36]*x2 +v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[47]*x7; 101449b5e25fSSatish Balay z[7*i+6] += v[42]*x1+ v[43]*x2 +v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 1015831a3094SHong Zhang v += 49; jmin++; 10167fbae186SHong Zhang } 1017*444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1018*444d8c10SJed Brown PetscPrefetchBlock(v+49*n,49*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1019831a3094SHong Zhang for (j=jmin; j<n; j++) { 102049b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 102149b5e25fSSatish Balay cval = ib[j]*7; 102249b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6+ v[6]*x7; 102349b5e25fSSatish Balay z[cval+1] += v[7]*x1 + v[8]*x2 + v[9]*x3 + v[10]*x4+ v[11]*x5 + v[12]*x6+ v[13]*x7; 102449b5e25fSSatish Balay z[cval+2] += v[14]*x1 + v[15]*x2 + v[16]*x3 + v[17]*x4+ v[18]*x5 + v[19]*x6+ v[20]*x7; 102549b5e25fSSatish Balay z[cval+3] += v[21]*x1 + v[22]*x2 + v[23]*x3 + v[24]*x4+ v[25]*x5 + v[26]*x6+ v[27]*x7; 102649b5e25fSSatish Balay z[cval+4] += v[28]*x1 + v[29]*x2 + v[30]*x3 + v[31]*x4+ v[32]*x5 + v[33]*x6+ v[34]*x7; 102749b5e25fSSatish Balay z[cval+5] += v[35]*x1 + v[36]*x2 + v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[41]*x7; 102849b5e25fSSatish Balay z[cval+6] += v[42]*x1 + v[43]*x2 + v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 102949b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 103049b5e25fSSatish Balay z[7*i] +=v[0]*x[cval]+v[7]*x[cval+1]+v[14]*x[cval+2]+v[21]*x[cval+3]+v[28]*x[cval+4]+v[35]*x[cval+5]+v[42]*x[cval+6]; 103149b5e25fSSatish Balay z[7*i+1]+=v[1]*x[cval]+v[8]*x[cval+1]+v[15]*x[cval+2]+v[22]*x[cval+3]+v[29]*x[cval+4]+v[36]*x[cval+5]+v[43]*x[cval+6]; 103249b5e25fSSatish Balay z[7*i+2]+=v[2]*x[cval]+v[9]*x[cval+1]+v[16]*x[cval+2]+v[23]*x[cval+3]+v[30]*x[cval+4]+v[37]*x[cval+5]+v[44]*x[cval+6]; 103349b5e25fSSatish Balay z[7*i+3]+=v[3]*x[cval]+v[10]*x[cval+1]+v[17]*x[cval+2]+v[24]*x[cval+3]+v[31]*x[cval+4]+v[38]*x[cval+5]+v[45]*x[cval+6]; 103449b5e25fSSatish Balay z[7*i+4]+=v[4]*x[cval]+v[11]*x[cval+1]+v[18]*x[cval+2]+v[25]*x[cval+3]+v[32]*x[cval+4]+v[39]*x[cval+5]+v[46]*x[cval+6]; 103549b5e25fSSatish Balay z[7*i+5]+=v[5]*x[cval]+v[12]*x[cval+1]+v[19]*x[cval+2]+v[26]*x[cval+3]+v[33]*x[cval+4]+v[40]*x[cval+5]+v[47]*x[cval+6]; 103649b5e25fSSatish Balay z[7*i+6]+=v[6]*x[cval]+v[13]*x[cval+1]+v[20]*x[cval+2]+v[27]*x[cval+3]+v[34]*x[cval+4]+v[41]*x[cval+5]+v[48]*x[cval+6]; 103749b5e25fSSatish Balay v += 49; 103849b5e25fSSatish Balay } 103949b5e25fSSatish Balay xb +=7; ai++; 104049b5e25fSSatish Balay } 104149b5e25fSSatish Balay 10421ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1043bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 104449b5e25fSSatish Balay 1045dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 104649b5e25fSSatish Balay PetscFunctionReturn(0); 104749b5e25fSSatish Balay } 104849b5e25fSSatish Balay 10494a2ae208SSatish Balay #undef __FUNCT__ 10504a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqSBAIJ_N" 1051dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 105249b5e25fSSatish Balay { 105349b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1054bba805e6SBarry Smith PetscScalar *x,*x_ptr,*z,*z_ptr=0,*xb,*zb,*work,*workt; 1055066653e3SSatish Balay MatScalar *v; 1056dfbe8321SBarry Smith PetscErrorCode ierr; 1057d0f46423SBarry Smith PetscInt mbs=a->mbs,i,*idx,*aj,*ii,bs=A->rmap->bs,j,n,bs2=a->bs2,ncols,k; 105898c9bda7SSatish Balay PetscInt nonzerorow=0; 105949b5e25fSSatish Balay 106049b5e25fSSatish Balay PetscFunctionBegin; 1061343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 10621ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); x_ptr=x; 10631ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); z_ptr=z; 106449b5e25fSSatish Balay 106549b5e25fSSatish Balay aj = a->j; 106649b5e25fSSatish Balay v = a->a; 106749b5e25fSSatish Balay ii = a->i; 106849b5e25fSSatish Balay 106949b5e25fSSatish Balay if (!a->mult_work) { 1070d0f46423SBarry Smith ierr = PetscMalloc((A->rmap->n+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 107149b5e25fSSatish Balay } 107249b5e25fSSatish Balay work = a->mult_work; 107349b5e25fSSatish Balay 107449b5e25fSSatish Balay 107549b5e25fSSatish Balay for (i=0; i<mbs; i++) { 107649b5e25fSSatish Balay n = ii[1] - ii[0]; ncols = n*bs; 107749b5e25fSSatish Balay workt = work; idx=aj+ii[0]; 107898c9bda7SSatish Balay nonzerorow += (n>0); 107949b5e25fSSatish Balay 108049b5e25fSSatish Balay /* upper triangular part */ 108149b5e25fSSatish Balay for (j=0; j<n; j++) { 108249b5e25fSSatish Balay xb = x_ptr + bs*(*idx++); 108349b5e25fSSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 108449b5e25fSSatish Balay workt += bs; 108549b5e25fSSatish Balay } 108649b5e25fSSatish Balay /* z(i*bs:(i+1)*bs-1) += A(i,:)*x */ 108749b5e25fSSatish Balay Kernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 108849b5e25fSSatish Balay 108949b5e25fSSatish Balay /* strict lower triangular part */ 1090831a3094SHong Zhang idx = aj+ii[0]; 1091831a3094SHong Zhang if (*idx == i){ 109296b9376eSHong Zhang ncols -= bs; v += bs2; idx++; n--; 1093831a3094SHong Zhang } 109449b5e25fSSatish Balay if (ncols > 0){ 109549b5e25fSSatish Balay workt = work; 109687828ca2SBarry Smith ierr = PetscMemzero(workt,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 1097831a3094SHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,x,v,workt); 1098831a3094SHong Zhang for (j=0; j<n; j++) { 1099831a3094SHong Zhang zb = z_ptr + bs*(*idx++); 110049b5e25fSSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k] ; 110149b5e25fSSatish Balay workt += bs; 110249b5e25fSSatish Balay } 110349b5e25fSSatish Balay } 110449b5e25fSSatish Balay 110549b5e25fSSatish Balay x += bs; v += n*bs2; z += bs; ii++; 110649b5e25fSSatish Balay } 110749b5e25fSSatish Balay 11081ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1109bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 111049b5e25fSSatish Balay 1111dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 111249b5e25fSSatish Balay PetscFunctionReturn(0); 111349b5e25fSSatish Balay } 111449b5e25fSSatish Balay 11154a2ae208SSatish Balay #undef __FUNCT__ 11164a2ae208SSatish Balay #define __FUNCT__ "MatScale_SeqSBAIJ" 1117f4df32b1SMatthew Knepley PetscErrorCode MatScale_SeqSBAIJ(Mat inA,PetscScalar alpha) 111849b5e25fSSatish Balay { 111949b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)inA->data; 1120f4df32b1SMatthew Knepley PetscScalar oalpha = alpha; 1121efee365bSSatish Balay PetscErrorCode ierr; 11220805154bSBarry Smith PetscBLASInt one = 1,totalnz = PetscBLASIntCast(a->bs2*a->nz); 112349b5e25fSSatish Balay 112449b5e25fSSatish Balay PetscFunctionBegin; 1125f4df32b1SMatthew Knepley BLASscal_(&totalnz,&oalpha,a->a,&one); 1126efee365bSSatish Balay ierr = PetscLogFlops(totalnz);CHKERRQ(ierr); 112749b5e25fSSatish Balay PetscFunctionReturn(0); 112849b5e25fSSatish Balay } 112949b5e25fSSatish Balay 11304a2ae208SSatish Balay #undef __FUNCT__ 11314a2ae208SSatish Balay #define __FUNCT__ "MatNorm_SeqSBAIJ" 1132dfbe8321SBarry Smith PetscErrorCode MatNorm_SeqSBAIJ(Mat A,NormType type,PetscReal *norm) 113349b5e25fSSatish Balay { 113449b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 113549b5e25fSSatish Balay MatScalar *v = a->a; 113649b5e25fSSatish Balay PetscReal sum_diag = 0.0, sum_off = 0.0, *sum; 1137d0f46423SBarry Smith PetscInt i,j,k,bs = A->rmap->bs,bs2=a->bs2,k1,mbs=a->mbs,*aj=a->j; 11386849ba73SBarry Smith PetscErrorCode ierr; 113913f74950SBarry Smith PetscInt *jl,*il,jmin,jmax,nexti,ik,*col; 114049b5e25fSSatish Balay 114149b5e25fSSatish Balay PetscFunctionBegin; 114249b5e25fSSatish Balay if (type == NORM_FROBENIUS) { 114349b5e25fSSatish Balay for (k=0; k<mbs; k++){ 114449b5e25fSSatish Balay jmin = a->i[k]; jmax = a->i[k+1]; 1145831a3094SHong Zhang col = aj + jmin; 1146831a3094SHong Zhang if (*col == k){ /* diagonal block */ 114749b5e25fSSatish Balay for (i=0; i<bs2; i++){ 114849b5e25fSSatish Balay #if defined(PETSC_USE_COMPLEX) 114949b5e25fSSatish Balay sum_diag += PetscRealPart(PetscConj(*v)*(*v)); v++; 115049b5e25fSSatish Balay #else 115149b5e25fSSatish Balay sum_diag += (*v)*(*v); v++; 115249b5e25fSSatish Balay #endif 115349b5e25fSSatish Balay } 1154831a3094SHong Zhang jmin++; 1155831a3094SHong Zhang } 1156831a3094SHong Zhang for (j=jmin; j<jmax; j++){ /* off-diagonal blocks */ 115749b5e25fSSatish Balay for (i=0; i<bs2; i++){ 115849b5e25fSSatish Balay #if defined(PETSC_USE_COMPLEX) 115949b5e25fSSatish Balay sum_off += PetscRealPart(PetscConj(*v)*(*v)); v++; 116049b5e25fSSatish Balay #else 116149b5e25fSSatish Balay sum_off += (*v)*(*v); v++; 116249b5e25fSSatish Balay #endif 116349b5e25fSSatish Balay } 116449b5e25fSSatish Balay } 116549b5e25fSSatish Balay } 116649b5e25fSSatish Balay *norm = sqrt(sum_diag + 2*sum_off); 11670b8dc8d2SHong Zhang } else if (type == NORM_INFINITY || type == NORM_1) { /* maximum row/column sum */ 116874ed9c26SBarry Smith ierr = PetscMalloc3(bs,PetscReal,&sum,mbs,PetscInt,&il,mbs,PetscInt,&jl);CHKERRQ(ierr); 11690b8dc8d2SHong Zhang for (i=0; i<mbs; i++) jl[i] = mbs; 11700b8dc8d2SHong Zhang il[0] = 0; 117149b5e25fSSatish Balay 117249b5e25fSSatish Balay *norm = 0.0; 117349b5e25fSSatish Balay for (k=0; k<mbs; k++) { /* k_th block row */ 117449b5e25fSSatish Balay for (j=0; j<bs; j++) sum[j]=0.0; 117549b5e25fSSatish Balay /*-- col sum --*/ 117649b5e25fSSatish Balay i = jl[k]; /* first |A(i,k)| to be added */ 1177831a3094SHong Zhang /* jl[k]=i: first nozero element in row i for submatrix A(1:k,k:n) (active window) 1178831a3094SHong Zhang at step k */ 117949b5e25fSSatish Balay while (i<mbs){ 118049b5e25fSSatish Balay nexti = jl[i]; /* next block row to be added */ 118149b5e25fSSatish Balay ik = il[i]; /* block index of A(i,k) in the array a */ 118249b5e25fSSatish Balay for (j=0; j<bs; j++){ 118349b5e25fSSatish Balay v = a->a + ik*bs2 + j*bs; 118449b5e25fSSatish Balay for (k1=0; k1<bs; k1++) { 118549b5e25fSSatish Balay sum[j] += PetscAbsScalar(*v); v++; 118649b5e25fSSatish Balay } 118749b5e25fSSatish Balay } 118849b5e25fSSatish Balay /* update il, jl */ 1189831a3094SHong Zhang jmin = ik + 1; /* block index of array a: points to the next nonzero of A in row i */ 1190831a3094SHong Zhang jmax = a->i[i+1]; 119149b5e25fSSatish Balay if (jmin < jmax){ 119249b5e25fSSatish Balay il[i] = jmin; 119349b5e25fSSatish Balay j = a->j[jmin]; 119449b5e25fSSatish Balay jl[i] = jl[j]; jl[j]=i; 119549b5e25fSSatish Balay } 119649b5e25fSSatish Balay i = nexti; 119749b5e25fSSatish Balay } 119849b5e25fSSatish Balay /*-- row sum --*/ 119949b5e25fSSatish Balay jmin = a->i[k]; jmax = a->i[k+1]; 120049b5e25fSSatish Balay for (i=jmin; i<jmax; i++) { 120149b5e25fSSatish Balay for (j=0; j<bs; j++){ 120249b5e25fSSatish Balay v = a->a + i*bs2 + j; 120349b5e25fSSatish Balay for (k1=0; k1<bs; k1++){ 12040b8dc8d2SHong Zhang sum[j] += PetscAbsScalar(*v); v += bs; 120549b5e25fSSatish Balay } 120649b5e25fSSatish Balay } 120749b5e25fSSatish Balay } 120849b5e25fSSatish Balay /* add k_th block row to il, jl */ 1209831a3094SHong Zhang col = aj+jmin; 1210831a3094SHong Zhang if (*col == k) jmin++; 121149b5e25fSSatish Balay if (jmin < jmax){ 121249b5e25fSSatish Balay il[k] = jmin; 12130b8dc8d2SHong Zhang j = a->j[jmin]; jl[k] = jl[j]; jl[j] = k; 121449b5e25fSSatish Balay } 121549b5e25fSSatish Balay for (j=0; j<bs; j++){ 121649b5e25fSSatish Balay if (sum[j] > *norm) *norm = sum[j]; 121749b5e25fSSatish Balay } 121849b5e25fSSatish Balay } 121974ed9c26SBarry Smith ierr = PetscFree3(sum,il,jl);CHKERRQ(ierr); 122049b5e25fSSatish Balay } else { 1221e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for this norm yet"); 122249b5e25fSSatish Balay } 122349b5e25fSSatish Balay PetscFunctionReturn(0); 122449b5e25fSSatish Balay } 122549b5e25fSSatish Balay 12264a2ae208SSatish Balay #undef __FUNCT__ 12274a2ae208SSatish Balay #define __FUNCT__ "MatEqual_SeqSBAIJ" 1228ace3abfcSBarry Smith PetscErrorCode MatEqual_SeqSBAIJ(Mat A,Mat B,PetscBool * flg) 122949b5e25fSSatish Balay { 123049b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ *)A->data,*b = (Mat_SeqSBAIJ *)B->data; 1231dfbe8321SBarry Smith PetscErrorCode ierr; 123249b5e25fSSatish Balay 123349b5e25fSSatish Balay PetscFunctionBegin; 123449b5e25fSSatish Balay 123549b5e25fSSatish Balay /* If the matrix/block dimensions are not equal, or no of nonzeros or shift */ 1236d0f46423SBarry Smith if ((A->rmap->N != B->rmap->N) || (A->cmap->n != B->cmap->n) || (A->rmap->bs != B->rmap->bs)|| (a->nz != b->nz)) { 1237ef511fbeSHong Zhang *flg = PETSC_FALSE; 1238ef511fbeSHong Zhang PetscFunctionReturn(0); 123949b5e25fSSatish Balay } 124049b5e25fSSatish Balay 124149b5e25fSSatish Balay /* if the a->i are the same */ 124213f74950SBarry Smith ierr = PetscMemcmp(a->i,b->i,(a->mbs+1)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1243abc0a331SBarry Smith if (!*flg) { 124449b5e25fSSatish Balay PetscFunctionReturn(0); 124549b5e25fSSatish Balay } 124649b5e25fSSatish Balay 124749b5e25fSSatish Balay /* if a->j are the same */ 124813f74950SBarry Smith ierr = PetscMemcmp(a->j,b->j,(a->nz)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1249abc0a331SBarry Smith if (!*flg) { 125049b5e25fSSatish Balay PetscFunctionReturn(0); 125149b5e25fSSatish Balay } 125249b5e25fSSatish Balay /* if a->a are the same */ 1253d0f46423SBarry Smith ierr = PetscMemcmp(a->a,b->a,(a->nz)*(A->rmap->bs)*(A->rmap->bs)*sizeof(PetscScalar),flg);CHKERRQ(ierr); 1254935af2e7SHong Zhang PetscFunctionReturn(0); 125549b5e25fSSatish Balay } 125649b5e25fSSatish Balay 12574a2ae208SSatish Balay #undef __FUNCT__ 12584a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_SeqSBAIJ" 1259dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_SeqSBAIJ(Mat A,Vec v) 126049b5e25fSSatish Balay { 126149b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1262dfbe8321SBarry Smith PetscErrorCode ierr; 126313f74950SBarry Smith PetscInt i,j,k,n,row,bs,*ai,*aj,ambs,bs2; 126487828ca2SBarry Smith PetscScalar *x,zero = 0.0; 126549b5e25fSSatish Balay MatScalar *aa,*aa_j; 126649b5e25fSSatish Balay 126749b5e25fSSatish Balay PetscFunctionBegin; 1268d0f46423SBarry Smith bs = A->rmap->bs; 1269e32f2f54SBarry Smith if (A->factortype && bs>1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix with bs>1"); 127082799104SHong Zhang 127149b5e25fSSatish Balay aa = a->a; 127249b5e25fSSatish Balay ai = a->i; 127349b5e25fSSatish Balay aj = a->j; 127449b5e25fSSatish Balay ambs = a->mbs; 127549b5e25fSSatish Balay bs2 = a->bs2; 127649b5e25fSSatish Balay 12772dcb1b2aSMatthew Knepley ierr = VecSet(v,zero);CHKERRQ(ierr); 12781ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 127949b5e25fSSatish Balay ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); 1280e32f2f54SBarry Smith if (n != A->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming matrix and vector"); 128149b5e25fSSatish Balay for (i=0; i<ambs; i++) { 128249b5e25fSSatish Balay j=ai[i]; 128349b5e25fSSatish Balay if (aj[j] == i) { /* if this is a diagonal element */ 128449b5e25fSSatish Balay row = i*bs; 128549b5e25fSSatish Balay aa_j = aa + j*bs2; 1286d5f3da31SBarry Smith if (A->factortype && bs==1){ 128782799104SHong Zhang for (k=0; k<bs2; k+=(bs+1),row++) x[row] = 1.0/aa_j[k]; 128882799104SHong Zhang } else { 128949b5e25fSSatish Balay for (k=0; k<bs2; k+=(bs+1),row++) x[row] = aa_j[k]; 129049b5e25fSSatish Balay } 129149b5e25fSSatish Balay } 129282799104SHong Zhang } 129382799104SHong Zhang 12941ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 129549b5e25fSSatish Balay PetscFunctionReturn(0); 129649b5e25fSSatish Balay } 129749b5e25fSSatish Balay 12984a2ae208SSatish Balay #undef __FUNCT__ 12994a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_SeqSBAIJ" 1300dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_SeqSBAIJ(Mat A,Vec ll,Vec rr) 130149b5e25fSSatish Balay { 130249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 13035e90f9d9SHong Zhang PetscScalar *l,x,*li,*ri; 130449b5e25fSSatish Balay MatScalar *aa,*v; 1305dfbe8321SBarry Smith PetscErrorCode ierr; 13065e90f9d9SHong Zhang PetscInt i,j,k,lm,M,m,*ai,*aj,mbs,tmp,bs,bs2; 1307ace3abfcSBarry Smith PetscBool flg; 130849b5e25fSSatish Balay 130949b5e25fSSatish Balay PetscFunctionBegin; 1310b3bf805bSHong Zhang if (ll != rr){ 1311b3bf805bSHong Zhang ierr = VecEqual(ll,rr,&flg);CHKERRQ(ierr); 1312e7e72b3dSBarry Smith if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n"); 1313b3bf805bSHong Zhang } 1314b3bf805bSHong Zhang if (!ll) PetscFunctionReturn(0); 131549b5e25fSSatish Balay ai = a->i; 131649b5e25fSSatish Balay aj = a->j; 131749b5e25fSSatish Balay aa = a->a; 1318d0f46423SBarry Smith m = A->rmap->N; 1319d0f46423SBarry Smith bs = A->rmap->bs; 132049b5e25fSSatish Balay mbs = a->mbs; 132149b5e25fSSatish Balay bs2 = a->bs2; 132249b5e25fSSatish Balay 13231ebc52fbSHong Zhang ierr = VecGetArray(ll,&l);CHKERRQ(ierr); 132449b5e25fSSatish Balay ierr = VecGetLocalSize(ll,&lm);CHKERRQ(ierr); 1325e32f2f54SBarry Smith if (lm != m) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector wrong length"); 132649b5e25fSSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 132749b5e25fSSatish Balay M = ai[i+1] - ai[i]; 132849b5e25fSSatish Balay li = l + i*bs; 132949b5e25fSSatish Balay v = aa + bs2*ai[i]; 133049b5e25fSSatish Balay for (j=0; j<M; j++) { /* for each block */ 133149b5e25fSSatish Balay ri = l + bs*aj[ai[i]+j]; 13325e90f9d9SHong Zhang for (k=0; k<bs; k++) { 133349b5e25fSSatish Balay x = ri[k]; 133449b5e25fSSatish Balay for (tmp=0; tmp<bs; tmp++) (*v++) *= li[tmp]*x; 133549b5e25fSSatish Balay } 133649b5e25fSSatish Balay } 133749b5e25fSSatish Balay } 13381ebc52fbSHong Zhang ierr = VecRestoreArray(ll,&l);CHKERRQ(ierr); 1339dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz);CHKERRQ(ierr); 134049b5e25fSSatish Balay PetscFunctionReturn(0); 134149b5e25fSSatish Balay } 134249b5e25fSSatish Balay 13434a2ae208SSatish Balay #undef __FUNCT__ 13444a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_SeqSBAIJ" 1345dfbe8321SBarry Smith PetscErrorCode MatGetInfo_SeqSBAIJ(Mat A,MatInfoType flag,MatInfo *info) 134649b5e25fSSatish Balay { 134749b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 134849b5e25fSSatish Balay 134949b5e25fSSatish Balay PetscFunctionBegin; 135049b5e25fSSatish Balay info->block_size = a->bs2; 1351ceed8ce5SJed Brown info->nz_allocated = a->bs2*a->maxnz; /*num. of nonzeros in upper triangular part */ 13526c6c5352SBarry Smith info->nz_used = a->bs2*a->nz; /*num. of nonzeros in upper triangular part */ 135349b5e25fSSatish Balay info->nz_unneeded = (double)(info->nz_allocated - info->nz_used); 135449b5e25fSSatish Balay info->assemblies = A->num_ass; 13558e58a170SBarry Smith info->mallocs = A->info.mallocs; 13567adad957SLisandro Dalcin info->memory = ((PetscObject)A)->mem; 1357d5f3da31SBarry Smith if (A->factortype) { 135849b5e25fSSatish Balay info->fill_ratio_given = A->info.fill_ratio_given; 135949b5e25fSSatish Balay info->fill_ratio_needed = A->info.fill_ratio_needed; 136049b5e25fSSatish Balay info->factor_mallocs = A->info.factor_mallocs; 136149b5e25fSSatish Balay } else { 136249b5e25fSSatish Balay info->fill_ratio_given = 0; 136349b5e25fSSatish Balay info->fill_ratio_needed = 0; 136449b5e25fSSatish Balay info->factor_mallocs = 0; 136549b5e25fSSatish Balay } 136649b5e25fSSatish Balay PetscFunctionReturn(0); 136749b5e25fSSatish Balay } 136849b5e25fSSatish Balay 136949b5e25fSSatish Balay 13704a2ae208SSatish Balay #undef __FUNCT__ 13714a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_SeqSBAIJ" 1372dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_SeqSBAIJ(Mat A) 137349b5e25fSSatish Balay { 137449b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1375dfbe8321SBarry Smith PetscErrorCode ierr; 137649b5e25fSSatish Balay 137749b5e25fSSatish Balay PetscFunctionBegin; 137849b5e25fSSatish Balay ierr = PetscMemzero(a->a,a->bs2*a->i[a->mbs]*sizeof(MatScalar));CHKERRQ(ierr); 137949b5e25fSSatish Balay PetscFunctionReturn(0); 138049b5e25fSSatish Balay } 1381dc354874SHong Zhang 13824a2ae208SSatish Balay #undef __FUNCT__ 1383985db425SBarry Smith #define __FUNCT__ "MatGetRowMaxAbs_SeqSBAIJ" 1384985db425SBarry Smith /* 1385985db425SBarry Smith This code does not work since it only checks the upper triangular part of 1386985db425SBarry Smith the matrix. Hence it is not listed in the function table. 1387985db425SBarry Smith */ 1388985db425SBarry Smith PetscErrorCode MatGetRowMaxAbs_SeqSBAIJ(Mat A,Vec v,PetscInt idx[]) 1389dc354874SHong Zhang { 1390dc354874SHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1391dfbe8321SBarry Smith PetscErrorCode ierr; 139213f74950SBarry Smith PetscInt i,j,n,row,col,bs,*ai,*aj,mbs; 1393c3fca9a7SHong Zhang PetscReal atmp; 1394273d9f13SBarry Smith MatScalar *aa; 1395985db425SBarry Smith PetscScalar *x; 139613f74950SBarry Smith PetscInt ncols,brow,bcol,krow,kcol; 1397dc354874SHong Zhang 1398dc354874SHong Zhang PetscFunctionBegin; 1399e32f2f54SBarry Smith if (idx) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Send email to petsc-maint@mcs.anl.gov"); 1400e32f2f54SBarry Smith if (A->factortype) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 1401d0f46423SBarry Smith bs = A->rmap->bs; 1402dc354874SHong Zhang aa = a->a; 1403dc354874SHong Zhang ai = a->i; 1404dc354874SHong Zhang aj = a->j; 140544117c81SHong Zhang mbs = a->mbs; 1406dc354874SHong Zhang 1407985db425SBarry Smith ierr = VecSet(v,0.0);CHKERRQ(ierr); 14081ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 1409dc354874SHong Zhang ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); 1410e32f2f54SBarry Smith if (n != A->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming matrix and vector"); 141144117c81SHong Zhang for (i=0; i<mbs; i++) { 1412d0f6400bSHong Zhang ncols = ai[1] - ai[0]; ai++; 1413d0f6400bSHong Zhang brow = bs*i; 141444117c81SHong Zhang for (j=0; j<ncols; j++){ 1415d0f6400bSHong Zhang bcol = bs*(*aj); 141644117c81SHong Zhang for (kcol=0; kcol<bs; kcol++){ 1417d0f6400bSHong Zhang col = bcol + kcol; /* col index */ 141844117c81SHong Zhang for (krow=0; krow<bs; krow++){ 1419d0f6400bSHong Zhang atmp = PetscAbsScalar(*aa); aa++; 1420d0f6400bSHong Zhang row = brow + krow; /* row index */ 1421c3fca9a7SHong Zhang if (PetscRealPart(x[row]) < atmp) x[row] = atmp; 1422c3fca9a7SHong Zhang if (*aj > i && PetscRealPart(x[col]) < atmp) x[col] = atmp; 142344117c81SHong Zhang } 142444117c81SHong Zhang } 1425d0f6400bSHong Zhang aj++; 1426dc354874SHong Zhang } 1427dc354874SHong Zhang } 14281ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 1429dc354874SHong Zhang PetscFunctionReturn(0); 1430dc354874SHong Zhang } 1431