149b5e25fSSatish Balay 2c6db04a5SJed Brown #include <../src/mat/impls/baij/seq/baij.h> 3c2916339SPierre Jolivet #include <../src/mat/impls/dense/seq/dense.h> 4c2916339SPierre Jolivet #include <../src/mat/impls/sbaij/seq/sbaij.h> 5af0996ceSBarry Smith #include <petsc/private/kernels/blockinvert.h> 6c6db04a5SJed Brown #include <petscbt.h> 7c6db04a5SJed Brown #include <petscblaslapack.h> 849b5e25fSSatish Balay 913f74950SBarry Smith PetscErrorCode MatIncreaseOverlap_SeqSBAIJ(Mat A,PetscInt is_max,IS is[],PetscInt ov) 1049b5e25fSSatish Balay { 115eee224dSHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 126849ba73SBarry Smith PetscErrorCode ierr; 135d0c19d7SBarry Smith PetscInt brow,i,j,k,l,mbs,n,*nidx,isz,bcol,bcol_max,start,end,*ai,*aj,bs,*nidx2; 145d0c19d7SBarry Smith const PetscInt *idx; 15db41cccfSHong Zhang PetscBT table_out,table_in; 16d94109b8SHong Zhang 17d94109b8SHong Zhang PetscFunctionBegin; 18e32f2f54SBarry Smith if (ov < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative overlap specified"); 19d94109b8SHong Zhang mbs = a->mbs; 20d94109b8SHong Zhang ai = a->i; 21d94109b8SHong Zhang aj = a->j; 22d0f46423SBarry Smith bs = A->rmap->bs; 2353b8de81SBarry Smith ierr = PetscBTCreate(mbs,&table_out);CHKERRQ(ierr); 24854ce69bSBarry Smith ierr = PetscMalloc1(mbs+1,&nidx);CHKERRQ(ierr); 25854ce69bSBarry Smith ierr = PetscMalloc1(A->rmap->N+1,&nidx2);CHKERRQ(ierr); 2653b8de81SBarry Smith ierr = PetscBTCreate(mbs,&table_in);CHKERRQ(ierr); 27d94109b8SHong Zhang 28d94109b8SHong Zhang for (i=0; i<is_max; i++) { /* for each is */ 29d94109b8SHong Zhang isz = 0; 30db41cccfSHong Zhang ierr = PetscBTMemzero(mbs,table_out);CHKERRQ(ierr); 31d94109b8SHong Zhang 32d94109b8SHong Zhang /* Extract the indices, assume there can be duplicate entries */ 33d94109b8SHong Zhang ierr = ISGetIndices(is[i],&idx);CHKERRQ(ierr); 34d94109b8SHong Zhang ierr = ISGetLocalSize(is[i],&n);CHKERRQ(ierr); 35d94109b8SHong Zhang 36db41cccfSHong Zhang /* Enter these into the temp arrays i.e mark table_out[brow], enter brow into new index */ 37dbe03f88SHong Zhang bcol_max = 0; 38d94109b8SHong Zhang for (j=0; j<n; ++j) { 39d94109b8SHong Zhang brow = idx[j]/bs; /* convert the indices into block indices */ 40e32f2f54SBarry Smith if (brow >= mbs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"index greater than mat-dim"); 41db41cccfSHong Zhang if (!PetscBTLookupSet(table_out,brow)) { 42dbe03f88SHong Zhang nidx[isz++] = brow; 43dbe03f88SHong Zhang if (bcol_max < brow) bcol_max = brow; 44dbe03f88SHong Zhang } 45d94109b8SHong Zhang } 46d94109b8SHong Zhang ierr = ISRestoreIndices(is[i],&idx);CHKERRQ(ierr); 476bf464f9SBarry Smith ierr = ISDestroy(&is[i]);CHKERRQ(ierr); 48d94109b8SHong Zhang 49d94109b8SHong Zhang k = 0; 50d94109b8SHong Zhang for (j=0; j<ov; j++) { /* for each overlap */ 51db41cccfSHong Zhang /* set table_in for lookup - only mark entries that are added onto nidx in (j-1)-th overlap */ 52db41cccfSHong Zhang ierr = PetscBTMemzero(mbs,table_in);CHKERRQ(ierr); 53db41cccfSHong Zhang for (l=k; l<isz; l++) { ierr = PetscBTSet(table_in,nidx[l]);CHKERRQ(ierr); } 54d94109b8SHong Zhang 55d94109b8SHong Zhang n = isz; /* length of the updated is[i] */ 56d94109b8SHong Zhang for (brow=0; brow<mbs; brow++) { 57d94109b8SHong Zhang start = ai[brow]; end = ai[brow+1]; 58db41cccfSHong Zhang if (PetscBTLookup(table_in,brow)) { /* brow is on nidx - row search: collect all bcol in this brow */ 59d94109b8SHong Zhang for (l = start; l<end; l++) { 60d94109b8SHong Zhang bcol = aj[l]; 61d7b97159SHong Zhang if (!PetscBTLookupSet(table_out,bcol)) { 62d7b97159SHong Zhang nidx[isz++] = bcol; 63d7b97159SHong Zhang if (bcol_max < bcol) bcol_max = bcol; 64d7b97159SHong Zhang } 65d94109b8SHong Zhang } 66d94109b8SHong Zhang k++; 67d94109b8SHong Zhang if (k >= n) break; /* for (brow=0; brow<mbs; brow++) */ 68d94109b8SHong Zhang } else { /* brow is not on nidx - col serach: add brow onto nidx if there is a bcol in nidx */ 69d94109b8SHong Zhang for (l = start; l<end; l++) { 70d94109b8SHong Zhang bcol = aj[l]; 71dbe03f88SHong Zhang if (bcol > bcol_max) break; 72db41cccfSHong Zhang if (PetscBTLookup(table_in,bcol)) { 7326fbe8dcSKarl Rupp if (!PetscBTLookupSet(table_out,brow)) nidx[isz++] = brow; 74d94109b8SHong Zhang break; /* for l = start; l<end ; l++) */ 75d94109b8SHong Zhang } 76d94109b8SHong Zhang } 77d94109b8SHong Zhang } 78d94109b8SHong Zhang } 79d94109b8SHong Zhang } /* for each overlap */ 80d94109b8SHong Zhang 81d94109b8SHong Zhang /* expand the Index Set */ 82d94109b8SHong Zhang for (j=0; j<isz; j++) { 8326fbe8dcSKarl Rupp for (k=0; k<bs; k++) nidx2[j*bs+k] = nidx[j]*bs+k; 84d94109b8SHong Zhang } 8570b3c8c7SBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,isz*bs,nidx2,PETSC_COPY_VALUES,is+i);CHKERRQ(ierr); 86d94109b8SHong Zhang } 8794bacf5dSBarry Smith ierr = PetscBTDestroy(&table_out);CHKERRQ(ierr); 88d94109b8SHong Zhang ierr = PetscFree(nidx);CHKERRQ(ierr); 89d94109b8SHong Zhang ierr = PetscFree(nidx2);CHKERRQ(ierr); 9094bacf5dSBarry Smith ierr = PetscBTDestroy(&table_in);CHKERRQ(ierr); 915eee224dSHong Zhang PetscFunctionReturn(0); 9249b5e25fSSatish Balay } 9349b5e25fSSatish Balay 94847daeccSHong Zhang /* Bseq is non-symmetric SBAIJ matrix, only used internally by PETSc. 95847daeccSHong Zhang Zero some ops' to avoid invalid usse */ 96847daeccSHong Zhang PetscErrorCode MatSeqSBAIJZeroOps_Private(Mat Bseq) 9749b5e25fSSatish Balay { 986849ba73SBarry Smith PetscErrorCode ierr; 9949b5e25fSSatish Balay 10049b5e25fSSatish Balay PetscFunctionBegin; 101847daeccSHong Zhang ierr = MatSetOption(Bseq,MAT_SYMMETRIC,PETSC_FALSE);CHKERRQ(ierr); 102847daeccSHong Zhang Bseq->ops->mult = 0; 103847daeccSHong Zhang Bseq->ops->multadd = 0; 104847daeccSHong Zhang Bseq->ops->multtranspose = 0; 105847daeccSHong Zhang Bseq->ops->multtransposeadd = 0; 106847daeccSHong Zhang Bseq->ops->lufactor = 0; 107847daeccSHong Zhang Bseq->ops->choleskyfactor = 0; 108847daeccSHong Zhang Bseq->ops->lufactorsymbolic = 0; 109847daeccSHong Zhang Bseq->ops->choleskyfactorsymbolic = 0; 110847daeccSHong Zhang Bseq->ops->getinertia = 0; 11149b5e25fSSatish Balay PetscFunctionReturn(0); 11249b5e25fSSatish Balay } 11349b5e25fSSatish Balay 1147dae84e0SHong Zhang /* same as MatCreateSubMatrices_SeqBAIJ(), except cast Mat_SeqSBAIJ */ 1157dae84e0SHong Zhang PetscErrorCode MatCreateSubMatrix_SeqSBAIJ_Private(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 116e50a8114SHong Zhang { 117e50a8114SHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*c; 118e50a8114SHong Zhang PetscErrorCode ierr; 119e50a8114SHong Zhang PetscInt *smap,i,k,kstart,kend,oldcols = a->nbs,*lens; 120e50a8114SHong Zhang PetscInt row,mat_i,*mat_j,tcol,*mat_ilen; 121e50a8114SHong Zhang const PetscInt *irow,*icol; 122e50a8114SHong Zhang PetscInt nrows,ncols,*ssmap,bs=A->rmap->bs,bs2=a->bs2; 123e50a8114SHong Zhang PetscInt *aj = a->j,*ai = a->i; 124e50a8114SHong Zhang MatScalar *mat_a; 125e50a8114SHong Zhang Mat C; 126e50a8114SHong Zhang PetscBool flag; 127e50a8114SHong Zhang 128e50a8114SHong Zhang PetscFunctionBegin; 129e50a8114SHong Zhang 130e50a8114SHong Zhang ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 131e50a8114SHong Zhang ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 132e50a8114SHong Zhang ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 133e50a8114SHong Zhang ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 134e50a8114SHong Zhang 135e50a8114SHong Zhang ierr = PetscCalloc1(1+oldcols,&smap);CHKERRQ(ierr); 136e50a8114SHong Zhang ssmap = smap; 137e50a8114SHong Zhang ierr = PetscMalloc1(1+nrows,&lens);CHKERRQ(ierr); 138e50a8114SHong Zhang for (i=0; i<ncols; i++) smap[icol[i]] = i+1; 139e50a8114SHong Zhang /* determine lens of each row */ 140e50a8114SHong Zhang for (i=0; i<nrows; i++) { 141e50a8114SHong Zhang kstart = ai[irow[i]]; 142e50a8114SHong Zhang kend = kstart + a->ilen[irow[i]]; 143e50a8114SHong Zhang lens[i] = 0; 144e50a8114SHong Zhang for (k=kstart; k<kend; k++) { 145e50a8114SHong Zhang if (ssmap[aj[k]]) lens[i]++; 146e50a8114SHong Zhang } 147e50a8114SHong Zhang } 148e50a8114SHong Zhang /* Create and fill new matrix */ 149e50a8114SHong Zhang if (scall == MAT_REUSE_MATRIX) { 150e50a8114SHong Zhang c = (Mat_SeqSBAIJ*)((*B)->data); 151e50a8114SHong Zhang 152e50a8114SHong Zhang if (c->mbs!=nrows || c->nbs!=ncols || (*B)->rmap->bs!=bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Submatrix wrong size"); 153580bdb30SBarry Smith ierr = PetscArraycmp(c->ilen,lens,c->mbs,&flag);CHKERRQ(ierr); 154e50a8114SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Cannot reuse matrix. wrong no of nonzeros"); 155580bdb30SBarry Smith ierr = PetscArrayzero(c->ilen,c->mbs);CHKERRQ(ierr); 156e50a8114SHong Zhang C = *B; 157e50a8114SHong Zhang } else { 158e50a8114SHong Zhang ierr = MatCreate(PetscObjectComm((PetscObject)A),&C);CHKERRQ(ierr); 159e50a8114SHong Zhang ierr = MatSetSizes(C,nrows*bs,ncols*bs,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 160e50a8114SHong Zhang ierr = MatSetType(C,((PetscObject)A)->type_name);CHKERRQ(ierr); 161367daffbSBarry Smith ierr = MatSeqSBAIJSetPreallocation(C,bs,0,lens);CHKERRQ(ierr); 162e50a8114SHong Zhang } 163e50a8114SHong Zhang c = (Mat_SeqSBAIJ*)(C->data); 164e50a8114SHong Zhang for (i=0; i<nrows; i++) { 165e50a8114SHong Zhang row = irow[i]; 166e50a8114SHong Zhang kstart = ai[row]; 167e50a8114SHong Zhang kend = kstart + a->ilen[row]; 168e50a8114SHong Zhang mat_i = c->i[i]; 169e50a8114SHong Zhang mat_j = c->j + mat_i; 170e50a8114SHong Zhang mat_a = c->a + mat_i*bs2; 171e50a8114SHong Zhang mat_ilen = c->ilen + i; 172e50a8114SHong Zhang for (k=kstart; k<kend; k++) { 173e50a8114SHong Zhang if ((tcol=ssmap[a->j[k]])) { 174e50a8114SHong Zhang *mat_j++ = tcol - 1; 175580bdb30SBarry Smith ierr = PetscArraycpy(mat_a,a->a+k*bs2,bs2);CHKERRQ(ierr); 176e50a8114SHong Zhang mat_a += bs2; 177e50a8114SHong Zhang (*mat_ilen)++; 178e50a8114SHong Zhang } 179e50a8114SHong Zhang } 180e50a8114SHong Zhang } 181e50a8114SHong Zhang /* sort */ 182e50a8114SHong Zhang { 183e50a8114SHong Zhang MatScalar *work; 184e50a8114SHong Zhang 185e50a8114SHong Zhang ierr = PetscMalloc1(bs2,&work);CHKERRQ(ierr); 186e50a8114SHong Zhang for (i=0; i<nrows; i++) { 187e50a8114SHong Zhang PetscInt ilen; 188e50a8114SHong Zhang mat_i = c->i[i]; 189e50a8114SHong Zhang mat_j = c->j + mat_i; 190e50a8114SHong Zhang mat_a = c->a + mat_i*bs2; 191e50a8114SHong Zhang ilen = c->ilen[i]; 192e50a8114SHong Zhang ierr = PetscSortIntWithDataArray(ilen,mat_j,mat_a,bs2*sizeof(MatScalar),work);CHKERRQ(ierr); 193e50a8114SHong Zhang } 194e50a8114SHong Zhang ierr = PetscFree(work);CHKERRQ(ierr); 195e50a8114SHong Zhang } 196e50a8114SHong Zhang 197e50a8114SHong Zhang /* Free work space */ 198e50a8114SHong Zhang ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 199e50a8114SHong Zhang ierr = PetscFree(smap);CHKERRQ(ierr); 200e50a8114SHong Zhang ierr = PetscFree(lens);CHKERRQ(ierr); 201e50a8114SHong Zhang ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 202e50a8114SHong Zhang ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 203e50a8114SHong Zhang 204e50a8114SHong Zhang ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 205e50a8114SHong Zhang *B = C; 206e50a8114SHong Zhang PetscFunctionReturn(0); 207e50a8114SHong Zhang } 208e50a8114SHong Zhang 2097dae84e0SHong Zhang PetscErrorCode MatCreateSubMatrix_SeqSBAIJ(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 21049b5e25fSSatish Balay { 211e50a8114SHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 212e50a8114SHong Zhang IS is1,is2; 2136849ba73SBarry Smith PetscErrorCode ierr; 214e50a8114SHong Zhang PetscInt *vary,*iary,nrows,ncols,i,bs=A->rmap->bs,count,maxmnbs; 215e50a8114SHong Zhang const PetscInt *irow,*icol; 21649b5e25fSSatish Balay 21749b5e25fSSatish Balay PetscFunctionBegin; 218e50a8114SHong Zhang ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 219e50a8114SHong Zhang ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 220e50a8114SHong Zhang ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 221e50a8114SHong Zhang ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 222e50a8114SHong Zhang 223e50a8114SHong Zhang /* Verify if the indices corespond to each element in a block 224e50a8114SHong Zhang and form the IS with compressed IS */ 225e50a8114SHong Zhang maxmnbs = PetscMax(a->mbs,a->nbs); 226e50a8114SHong Zhang ierr = PetscMalloc2(maxmnbs,&vary,maxmnbs,&iary);CHKERRQ(ierr); 227580bdb30SBarry Smith ierr = PetscArrayzero(vary,a->mbs);CHKERRQ(ierr); 228e50a8114SHong Zhang for (i=0; i<nrows; i++) vary[irow[i]/bs]++; 229e50a8114SHong Zhang for (i=0; i<a->mbs; i++) { 230e50a8114SHong Zhang if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Index set does not match blocks"); 231e50a8114SHong Zhang } 232e50a8114SHong Zhang count = 0; 233e50a8114SHong Zhang for (i=0; i<nrows; i++) { 234e50a8114SHong Zhang PetscInt j = irow[i] / bs; 235e50a8114SHong Zhang if ((vary[j]--)==bs) iary[count++] = j; 236e50a8114SHong Zhang } 237e50a8114SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,PETSC_COPY_VALUES,&is1);CHKERRQ(ierr); 238e50a8114SHong Zhang 239580bdb30SBarry Smith ierr = PetscArrayzero(vary,a->nbs);CHKERRQ(ierr); 240e50a8114SHong Zhang for (i=0; i<ncols; i++) vary[icol[i]/bs]++; 241e50a8114SHong Zhang for (i=0; i<a->nbs; i++) { 242e50a8114SHong Zhang if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Internal error in PETSc"); 243e50a8114SHong Zhang } 244e50a8114SHong Zhang count = 0; 245e50a8114SHong Zhang for (i=0; i<ncols; i++) { 246e50a8114SHong Zhang PetscInt j = icol[i] / bs; 247e50a8114SHong Zhang if ((vary[j]--)==bs) iary[count++] = j; 248e50a8114SHong Zhang } 249e50a8114SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,PETSC_COPY_VALUES,&is2);CHKERRQ(ierr); 250e50a8114SHong Zhang ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 251e50a8114SHong Zhang ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 252e50a8114SHong Zhang ierr = PetscFree2(vary,iary);CHKERRQ(ierr); 253e50a8114SHong Zhang 2547dae84e0SHong Zhang ierr = MatCreateSubMatrix_SeqSBAIJ_Private(A,is1,is2,scall,B);CHKERRQ(ierr); 255e50a8114SHong Zhang ierr = ISDestroy(&is1);CHKERRQ(ierr); 256e50a8114SHong Zhang ierr = ISDestroy(&is2);CHKERRQ(ierr); 257847daeccSHong Zhang 2588f46ffcaSHong Zhang if (isrow != iscol) { 2598f46ffcaSHong Zhang PetscBool isequal; 2608f46ffcaSHong Zhang ierr = ISEqual(isrow,iscol,&isequal);CHKERRQ(ierr); 261847daeccSHong Zhang if (!isequal) { 262847daeccSHong Zhang ierr = MatSeqSBAIJZeroOps_Private(*B);CHKERRQ(ierr); 2638f46ffcaSHong Zhang } 26449b5e25fSSatish Balay } 26549b5e25fSSatish Balay PetscFunctionReturn(0); 26649b5e25fSSatish Balay } 26749b5e25fSSatish Balay 2687dae84e0SHong Zhang PetscErrorCode MatCreateSubMatrices_SeqSBAIJ(Mat A,PetscInt n,const IS irow[],const IS icol[],MatReuse scall,Mat *B[]) 26949b5e25fSSatish Balay { 2706849ba73SBarry Smith PetscErrorCode ierr; 27113f74950SBarry Smith PetscInt i; 27249b5e25fSSatish Balay 27349b5e25fSSatish Balay PetscFunctionBegin; 274e50a8114SHong Zhang if (scall == MAT_INITIAL_MATRIX) { 275df750dc8SHong Zhang ierr = PetscCalloc1(n+1,B);CHKERRQ(ierr); 276afebec48SHong Zhang } 277e50a8114SHong Zhang 278e50a8114SHong Zhang for (i=0; i<n; i++) { 2797dae84e0SHong Zhang ierr = MatCreateSubMatrix_SeqSBAIJ(A,irow[i],icol[i],scall,&(*B)[i]);CHKERRQ(ierr); 28049b5e25fSSatish Balay } 28149b5e25fSSatish Balay PetscFunctionReturn(0); 28249b5e25fSSatish Balay } 28349b5e25fSSatish Balay 28449b5e25fSSatish Balay /* -------------------------------------------------------*/ 28549b5e25fSSatish Balay /* Should check that shapes of vectors and matrices match */ 28649b5e25fSSatish Balay /* -------------------------------------------------------*/ 28749b5e25fSSatish Balay 288dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_2(Mat A,Vec xx,Vec zz) 28949b5e25fSSatish Balay { 29049b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 291d9ca1df4SBarry Smith PetscScalar *z,x1,x2,zero=0.0; 292d9ca1df4SBarry Smith const PetscScalar *x,*xb; 293d9ca1df4SBarry Smith const MatScalar *v; 2946849ba73SBarry Smith PetscErrorCode ierr; 295d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 296d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 29798c9bda7SSatish Balay PetscInt nonzerorow=0; 29849b5e25fSSatish Balay 29949b5e25fSSatish Balay PetscFunctionBegin; 3002dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 301c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 302d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3031ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 30449b5e25fSSatish Balay 30549b5e25fSSatish Balay v = a->a; 30649b5e25fSSatish Balay xb = x; 30749b5e25fSSatish Balay 30849b5e25fSSatish Balay for (i=0; i<mbs; i++) { 30949b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 31049b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; 31149b5e25fSSatish Balay ib = aj + *ai; 312831a3094SHong Zhang jmin = 0; 31398c9bda7SSatish Balay nonzerorow += (n>0); 3147fbae186SHong Zhang if (*ib == i) { /* (diag of A)*x */ 31549b5e25fSSatish Balay z[2*i] += v[0]*x1 + v[2]*x2; 31649b5e25fSSatish Balay z[2*i+1] += v[2]*x1 + v[3]*x2; 317831a3094SHong Zhang v += 4; jmin++; 3187fbae186SHong Zhang } 319444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 320444d8c10SJed Brown PetscPrefetchBlock(v+4*n,4*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 321831a3094SHong Zhang for (j=jmin; j<n; j++) { 32249b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 32349b5e25fSSatish Balay cval = ib[j]*2; 32449b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2; 32549b5e25fSSatish Balay z[cval+1] += v[2]*x1 + v[3]*x2; 32649b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 32749b5e25fSSatish Balay z[2*i] += v[0]*x[cval] + v[2]*x[cval+1]; 32849b5e25fSSatish Balay z[2*i+1] += v[1]*x[cval] + v[3]*x[cval+1]; 32949b5e25fSSatish Balay v += 4; 33049b5e25fSSatish Balay } 33149b5e25fSSatish Balay xb +=2; ai++; 33249b5e25fSSatish Balay } 33349b5e25fSSatish Balay 334d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3351ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 336dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 33749b5e25fSSatish Balay PetscFunctionReturn(0); 33849b5e25fSSatish Balay } 33949b5e25fSSatish Balay 340dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_3(Mat A,Vec xx,Vec zz) 34149b5e25fSSatish Balay { 34249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 343d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,zero=0.0; 344d9ca1df4SBarry Smith const PetscScalar *x,*xb; 345d9ca1df4SBarry Smith const MatScalar *v; 3466849ba73SBarry Smith PetscErrorCode ierr; 347d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 348d9ca1df4SBarry Smith const PetscInt *aj = a->j,*ai = a->i,*ib; 34998c9bda7SSatish Balay PetscInt nonzerorow=0; 35049b5e25fSSatish Balay 35149b5e25fSSatish Balay PetscFunctionBegin; 3522dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 353c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 354d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 3551ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 35649b5e25fSSatish Balay 35749b5e25fSSatish Balay v = a->a; 35849b5e25fSSatish Balay xb = x; 35949b5e25fSSatish Balay 36049b5e25fSSatish Balay for (i=0; i<mbs; i++) { 36149b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 36249b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 36349b5e25fSSatish Balay ib = aj + *ai; 364831a3094SHong Zhang jmin = 0; 36598c9bda7SSatish Balay nonzerorow += (n>0); 3667fbae186SHong Zhang if (*ib == i) { /* (diag of A)*x */ 36749b5e25fSSatish Balay z[3*i] += v[0]*x1 + v[3]*x2 + v[6]*x3; 36849b5e25fSSatish Balay z[3*i+1] += v[3]*x1 + v[4]*x2 + v[7]*x3; 36949b5e25fSSatish Balay z[3*i+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 370831a3094SHong Zhang v += 9; jmin++; 3717fbae186SHong Zhang } 372444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 373444d8c10SJed Brown PetscPrefetchBlock(v+9*n,9*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 374831a3094SHong Zhang for (j=jmin; j<n; j++) { 37549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 37649b5e25fSSatish Balay cval = ib[j]*3; 37749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3; 37849b5e25fSSatish Balay z[cval+1] += v[3]*x1 + v[4]*x2 + v[5]*x3; 37949b5e25fSSatish Balay z[cval+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 38049b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 38149b5e25fSSatish Balay z[3*i] += v[0]*x[cval] + v[3]*x[cval+1]+ v[6]*x[cval+2]; 38249b5e25fSSatish Balay z[3*i+1] += v[1]*x[cval] + v[4]*x[cval+1]+ v[7]*x[cval+2]; 38349b5e25fSSatish Balay z[3*i+2] += v[2]*x[cval] + v[5]*x[cval+1]+ v[8]*x[cval+2]; 38449b5e25fSSatish Balay v += 9; 38549b5e25fSSatish Balay } 38649b5e25fSSatish Balay xb +=3; ai++; 38749b5e25fSSatish Balay } 38849b5e25fSSatish Balay 389d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 3901ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 391dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 39249b5e25fSSatish Balay PetscFunctionReturn(0); 39349b5e25fSSatish Balay } 39449b5e25fSSatish Balay 395dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_4(Mat A,Vec xx,Vec zz) 39649b5e25fSSatish Balay { 39749b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 398d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4,zero=0.0; 399d9ca1df4SBarry Smith const PetscScalar *x,*xb; 400d9ca1df4SBarry Smith const MatScalar *v; 4016849ba73SBarry Smith PetscErrorCode ierr; 402d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 403d9ca1df4SBarry Smith const PetscInt *aj = a->j,*ai = a->i,*ib; 40498c9bda7SSatish Balay PetscInt nonzerorow = 0; 40549b5e25fSSatish Balay 40649b5e25fSSatish Balay PetscFunctionBegin; 4072dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 408c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 409d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 4101ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 41149b5e25fSSatish Balay 41249b5e25fSSatish Balay v = a->a; 41349b5e25fSSatish Balay xb = x; 41449b5e25fSSatish Balay 41549b5e25fSSatish Balay for (i=0; i<mbs; i++) { 41649b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 41749b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 41849b5e25fSSatish Balay ib = aj + *ai; 419831a3094SHong Zhang jmin = 0; 42098c9bda7SSatish Balay nonzerorow += (n>0); 4217fbae186SHong Zhang if (*ib == i) { /* (diag of A)*x */ 42249b5e25fSSatish Balay z[4*i] += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 42349b5e25fSSatish Balay z[4*i+1] += v[4]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 42449b5e25fSSatish Balay z[4*i+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[14]*x4; 42549b5e25fSSatish Balay z[4*i+3] += v[12]*x1+ v[13]*x2+ v[14]*x3 + v[15]*x4; 426831a3094SHong Zhang v += 16; jmin++; 4277fbae186SHong Zhang } 428444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 429444d8c10SJed Brown PetscPrefetchBlock(v+16*n,16*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 430831a3094SHong Zhang for (j=jmin; j<n; j++) { 43149b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 43249b5e25fSSatish Balay cval = ib[j]*4; 43349b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 43449b5e25fSSatish Balay z[cval+1] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 43549b5e25fSSatish Balay z[cval+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 43649b5e25fSSatish Balay z[cval+3] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 43749b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 43849b5e25fSSatish Balay z[4*i] += v[0]*x[cval] + v[4]*x[cval+1]+ v[8]*x[cval+2] + v[12]*x[cval+3]; 43949b5e25fSSatish Balay z[4*i+1] += v[1]*x[cval] + v[5]*x[cval+1]+ v[9]*x[cval+2] + v[13]*x[cval+3]; 44049b5e25fSSatish Balay z[4*i+2] += v[2]*x[cval] + v[6]*x[cval+1]+ v[10]*x[cval+2]+ v[14]*x[cval+3]; 44149b5e25fSSatish Balay z[4*i+3] += v[3]*x[cval] + v[7]*x[cval+1]+ v[11]*x[cval+2]+ v[15]*x[cval+3]; 44249b5e25fSSatish Balay v += 16; 44349b5e25fSSatish Balay } 44449b5e25fSSatish Balay xb +=4; ai++; 44549b5e25fSSatish Balay } 44649b5e25fSSatish Balay 447d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 4481ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 449dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 45049b5e25fSSatish Balay PetscFunctionReturn(0); 45149b5e25fSSatish Balay } 45249b5e25fSSatish Balay 453dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_5(Mat A,Vec xx,Vec zz) 45449b5e25fSSatish Balay { 45549b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 456d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4,x5,zero=0.0; 457d9ca1df4SBarry Smith const PetscScalar *x,*xb; 458d9ca1df4SBarry Smith const MatScalar *v; 4596849ba73SBarry Smith PetscErrorCode ierr; 460d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 461d9ca1df4SBarry Smith const PetscInt *aj = a->j,*ai = a->i,*ib; 46298c9bda7SSatish Balay PetscInt nonzerorow=0; 46349b5e25fSSatish Balay 46449b5e25fSSatish Balay PetscFunctionBegin; 4652dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 466c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 467d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 4681ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 46949b5e25fSSatish Balay 47049b5e25fSSatish Balay v = a->a; 47149b5e25fSSatish Balay xb = x; 47249b5e25fSSatish Balay 47349b5e25fSSatish Balay for (i=0; i<mbs; i++) { 47449b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 47549b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; 47649b5e25fSSatish Balay ib = aj + *ai; 477831a3094SHong Zhang jmin = 0; 47898c9bda7SSatish Balay nonzerorow += (n>0); 4797fbae186SHong Zhang if (*ib == i) { /* (diag of A)*x */ 48049b5e25fSSatish Balay z[5*i] += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4+ v[20]*x5; 48149b5e25fSSatish Balay z[5*i+1] += v[5]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4+ v[21]*x5; 48249b5e25fSSatish Balay z[5*i+2] += v[10]*x1 +v[11]*x2 + v[12]*x3 + v[17]*x4+ v[22]*x5; 48349b5e25fSSatish Balay z[5*i+3] += v[15]*x1 +v[16]*x2 + v[17]*x3 + v[18]*x4+ v[23]*x5; 48449b5e25fSSatish Balay z[5*i+4] += v[20]*x1 +v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 485831a3094SHong Zhang v += 25; jmin++; 4867fbae186SHong Zhang } 487444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 488444d8c10SJed Brown PetscPrefetchBlock(v+25*n,25*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 489831a3094SHong Zhang for (j=jmin; j<n; j++) { 49049b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 49149b5e25fSSatish Balay cval = ib[j]*5; 49249b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 49349b5e25fSSatish Balay z[cval+1] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 49449b5e25fSSatish Balay z[cval+2] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4+ v[14]*x5; 49549b5e25fSSatish Balay z[cval+3] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4+ v[19]*x5; 49649b5e25fSSatish Balay z[cval+4] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 49749b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 49849b5e25fSSatish Balay z[5*i] +=v[0]*x[cval]+v[5]*x[cval+1]+v[10]*x[cval+2]+v[15]*x[cval+3]+v[20]*x[cval+4]; 49949b5e25fSSatish Balay z[5*i+1] +=v[1]*x[cval]+v[6]*x[cval+1]+v[11]*x[cval+2]+v[16]*x[cval+3]+v[21]*x[cval+4]; 50049b5e25fSSatish Balay z[5*i+2] +=v[2]*x[cval]+v[7]*x[cval+1]+v[12]*x[cval+2]+v[17]*x[cval+3]+v[22]*x[cval+4]; 50149b5e25fSSatish Balay z[5*i+3] +=v[3]*x[cval]+v[8]*x[cval+1]+v[13]*x[cval+2]+v[18]*x[cval+3]+v[23]*x[cval+4]; 50249b5e25fSSatish Balay z[5*i+4] +=v[4]*x[cval]+v[9]*x[cval+1]+v[14]*x[cval+2]+v[19]*x[cval+3]+v[24]*x[cval+4]; 50349b5e25fSSatish Balay v += 25; 50449b5e25fSSatish Balay } 50549b5e25fSSatish Balay xb +=5; ai++; 50649b5e25fSSatish Balay } 50749b5e25fSSatish Balay 508d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 5091ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 510dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 51149b5e25fSSatish Balay PetscFunctionReturn(0); 51249b5e25fSSatish Balay } 51349b5e25fSSatish Balay 514dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_6(Mat A,Vec xx,Vec zz) 51549b5e25fSSatish Balay { 51649b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 517d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4,x5,x6,zero=0.0; 518d9ca1df4SBarry Smith const PetscScalar *x,*xb; 519d9ca1df4SBarry Smith const MatScalar *v; 5206849ba73SBarry Smith PetscErrorCode ierr; 521d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 522d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 52398c9bda7SSatish Balay PetscInt nonzerorow=0; 52449b5e25fSSatish Balay 52549b5e25fSSatish Balay PetscFunctionBegin; 5262dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 527c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 528d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5291ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 53049b5e25fSSatish Balay 53149b5e25fSSatish Balay v = a->a; 53249b5e25fSSatish Balay xb = x; 53349b5e25fSSatish Balay 53449b5e25fSSatish Balay for (i=0; i<mbs; i++) { 53549b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 53649b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; 53749b5e25fSSatish Balay ib = aj + *ai; 538831a3094SHong Zhang jmin = 0; 53998c9bda7SSatish Balay nonzerorow += (n>0); 5407fbae186SHong Zhang if (*ib == i) { /* (diag of A)*x */ 54149b5e25fSSatish Balay z[6*i] += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4+ v[24]*x5 + v[30]*x6; 54249b5e25fSSatish Balay z[6*i+1] += v[6]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4+ v[25]*x5 + v[31]*x6; 54349b5e25fSSatish Balay z[6*i+2] += v[12]*x1 +v[13]*x2 + v[14]*x3 + v[20]*x4+ v[26]*x5 + v[32]*x6; 54449b5e25fSSatish Balay z[6*i+3] += v[18]*x1 +v[19]*x2 + v[20]*x3 + v[21]*x4+ v[27]*x5 + v[33]*x6; 54549b5e25fSSatish Balay z[6*i+4] += v[24]*x1 +v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[34]*x6; 54649b5e25fSSatish Balay z[6*i+5] += v[30]*x1 +v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 547831a3094SHong Zhang v += 36; jmin++; 5487fbae186SHong Zhang } 549444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 550444d8c10SJed Brown PetscPrefetchBlock(v+36*n,36*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 551831a3094SHong Zhang for (j=jmin; j<n; j++) { 55249b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 55349b5e25fSSatish Balay cval = ib[j]*6; 55449b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6; 55549b5e25fSSatish Balay z[cval+1] += v[6]*x1 + v[7]*x2 + v[8]*x3 + v[9]*x4+ v[10]*x5 + v[11]*x6; 55649b5e25fSSatish Balay z[cval+2] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4+ v[16]*x5 + v[17]*x6; 55749b5e25fSSatish Balay z[cval+3] += v[18]*x1 + v[19]*x2 + v[20]*x3 + v[21]*x4+ v[22]*x5 + v[23]*x6; 55849b5e25fSSatish Balay z[cval+4] += v[24]*x1 + v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[29]*x6; 55949b5e25fSSatish Balay z[cval+5] += v[30]*x1 + v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 56049b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 56149b5e25fSSatish Balay z[6*i] +=v[0]*x[cval]+v[6]*x[cval+1]+v[12]*x[cval+2]+v[18]*x[cval+3]+v[24]*x[cval+4]+v[30]*x[cval+5]; 56249b5e25fSSatish Balay z[6*i+1] +=v[1]*x[cval]+v[7]*x[cval+1]+v[13]*x[cval+2]+v[19]*x[cval+3]+v[25]*x[cval+4]+v[31]*x[cval+5]; 56349b5e25fSSatish Balay z[6*i+2] +=v[2]*x[cval]+v[8]*x[cval+1]+v[14]*x[cval+2]+v[20]*x[cval+3]+v[26]*x[cval+4]+v[32]*x[cval+5]; 56449b5e25fSSatish Balay z[6*i+3] +=v[3]*x[cval]+v[9]*x[cval+1]+v[15]*x[cval+2]+v[21]*x[cval+3]+v[27]*x[cval+4]+v[33]*x[cval+5]; 56549b5e25fSSatish Balay z[6*i+4] +=v[4]*x[cval]+v[10]*x[cval+1]+v[16]*x[cval+2]+v[22]*x[cval+3]+v[28]*x[cval+4]+v[34]*x[cval+5]; 56649b5e25fSSatish Balay z[6*i+5] +=v[5]*x[cval]+v[11]*x[cval+1]+v[17]*x[cval+2]+v[23]*x[cval+3]+v[29]*x[cval+4]+v[35]*x[cval+5]; 56749b5e25fSSatish Balay v += 36; 56849b5e25fSSatish Balay } 56949b5e25fSSatish Balay xb +=6; ai++; 57049b5e25fSSatish Balay } 57149b5e25fSSatish Balay 572d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 5731ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 574dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 57549b5e25fSSatish Balay PetscFunctionReturn(0); 57649b5e25fSSatish Balay } 577c2916339SPierre Jolivet 578dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_7(Mat A,Vec xx,Vec zz) 57949b5e25fSSatish Balay { 58049b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 581d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4,x5,x6,x7,zero=0.0; 582d9ca1df4SBarry Smith const PetscScalar *x,*xb; 583d9ca1df4SBarry Smith const MatScalar *v; 5846849ba73SBarry Smith PetscErrorCode ierr; 585d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 586d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 58798c9bda7SSatish Balay PetscInt nonzerorow=0; 58849b5e25fSSatish Balay 58949b5e25fSSatish Balay PetscFunctionBegin; 5902dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 591c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 592d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 5931ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 59449b5e25fSSatish Balay 59549b5e25fSSatish Balay v = a->a; 59649b5e25fSSatish Balay xb = x; 59749b5e25fSSatish Balay 59849b5e25fSSatish Balay for (i=0; i<mbs; i++) { 59949b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 60049b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; x7=xb[6]; 60149b5e25fSSatish Balay ib = aj + *ai; 602831a3094SHong Zhang jmin = 0; 60398c9bda7SSatish Balay nonzerorow += (n>0); 6047fbae186SHong Zhang if (*ib == i) { /* (diag of A)*x */ 60549b5e25fSSatish Balay z[7*i] += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4+ v[28]*x5 + v[35]*x6+ v[42]*x7; 60649b5e25fSSatish Balay z[7*i+1] += v[7]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4+ v[29]*x5 + v[36]*x6+ v[43]*x7; 60749b5e25fSSatish Balay z[7*i+2] += v[14]*x1+ v[15]*x2 +v[16]*x3 + v[23]*x4+ v[30]*x5 + v[37]*x6+ v[44]*x7; 60849b5e25fSSatish Balay z[7*i+3] += v[21]*x1+ v[22]*x2 +v[23]*x3 + v[24]*x4+ v[31]*x5 + v[38]*x6+ v[45]*x7; 60949b5e25fSSatish Balay z[7*i+4] += v[28]*x1+ v[29]*x2 +v[30]*x3 + v[31]*x4+ v[32]*x5 + v[39]*x6+ v[46]*x7; 61049b5e25fSSatish Balay z[7*i+5] += v[35]*x1+ v[36]*x2 +v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[47]*x7; 61149b5e25fSSatish Balay z[7*i+6] += v[42]*x1+ v[43]*x2 +v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 612831a3094SHong Zhang v += 49; jmin++; 6137fbae186SHong Zhang } 614444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 615444d8c10SJed Brown PetscPrefetchBlock(v+49*n,49*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 616831a3094SHong Zhang for (j=jmin; j<n; j++) { 61749b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 61849b5e25fSSatish Balay cval = ib[j]*7; 61949b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6+ v[6]*x7; 62049b5e25fSSatish Balay z[cval+1] += v[7]*x1 + v[8]*x2 + v[9]*x3 + v[10]*x4+ v[11]*x5 + v[12]*x6+ v[13]*x7; 62149b5e25fSSatish Balay z[cval+2] += v[14]*x1 + v[15]*x2 + v[16]*x3 + v[17]*x4+ v[18]*x5 + v[19]*x6+ v[20]*x7; 62249b5e25fSSatish Balay z[cval+3] += v[21]*x1 + v[22]*x2 + v[23]*x3 + v[24]*x4+ v[25]*x5 + v[26]*x6+ v[27]*x7; 62349b5e25fSSatish Balay z[cval+4] += v[28]*x1 + v[29]*x2 + v[30]*x3 + v[31]*x4+ v[32]*x5 + v[33]*x6+ v[34]*x7; 62449b5e25fSSatish Balay z[cval+5] += v[35]*x1 + v[36]*x2 + v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[41]*x7; 62549b5e25fSSatish Balay z[cval+6] += v[42]*x1 + v[43]*x2 + v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 62649b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 62749b5e25fSSatish Balay z[7*i] +=v[0]*x[cval]+v[7]*x[cval+1]+v[14]*x[cval+2]+v[21]*x[cval+3]+v[28]*x[cval+4]+v[35]*x[cval+5]+v[42]*x[cval+6]; 62849b5e25fSSatish Balay z[7*i+1]+=v[1]*x[cval]+v[8]*x[cval+1]+v[15]*x[cval+2]+v[22]*x[cval+3]+v[29]*x[cval+4]+v[36]*x[cval+5]+v[43]*x[cval+6]; 62949b5e25fSSatish Balay z[7*i+2]+=v[2]*x[cval]+v[9]*x[cval+1]+v[16]*x[cval+2]+v[23]*x[cval+3]+v[30]*x[cval+4]+v[37]*x[cval+5]+v[44]*x[cval+6]; 63049b5e25fSSatish Balay z[7*i+3]+=v[3]*x[cval]+v[10]*x[cval+1]+v[17]*x[cval+2]+v[24]*x[cval+3]+v[31]*x[cval+4]+v[38]*x[cval+5]+v[45]*x[cval+6]; 63149b5e25fSSatish Balay z[7*i+4]+=v[4]*x[cval]+v[11]*x[cval+1]+v[18]*x[cval+2]+v[25]*x[cval+3]+v[32]*x[cval+4]+v[39]*x[cval+5]+v[46]*x[cval+6]; 63249b5e25fSSatish Balay z[7*i+5]+=v[5]*x[cval]+v[12]*x[cval+1]+v[19]*x[cval+2]+v[26]*x[cval+3]+v[33]*x[cval+4]+v[40]*x[cval+5]+v[47]*x[cval+6]; 63349b5e25fSSatish Balay z[7*i+6]+=v[6]*x[cval]+v[13]*x[cval+1]+v[20]*x[cval+2]+v[27]*x[cval+3]+v[34]*x[cval+4]+v[41]*x[cval+5]+v[48]*x[cval+6]; 63449b5e25fSSatish Balay v += 49; 63549b5e25fSSatish Balay } 63649b5e25fSSatish Balay xb +=7; ai++; 63749b5e25fSSatish Balay } 638d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 6391ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 640dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*(a->nz*2.0 - nonzerorow) - nonzerorow);CHKERRQ(ierr); 64149b5e25fSSatish Balay PetscFunctionReturn(0); 64249b5e25fSSatish Balay } 64349b5e25fSSatish Balay 64449b5e25fSSatish Balay /* 64549b5e25fSSatish Balay This will not work with MatScalar == float because it calls the BLAS 64649b5e25fSSatish Balay */ 647dfbe8321SBarry Smith PetscErrorCode MatMult_SeqSBAIJ_N(Mat A,Vec xx,Vec zz) 64849b5e25fSSatish Balay { 64949b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 650d9ca1df4SBarry Smith PetscScalar *z,*z_ptr,*zb,*work,*workt,zero=0.0; 651d9ca1df4SBarry Smith const PetscScalar *x,*x_ptr,*xb; 652d9ca1df4SBarry Smith const MatScalar *v; 653dfbe8321SBarry Smith PetscErrorCode ierr; 654d9ca1df4SBarry Smith PetscInt mbs =a->mbs,i,bs=A->rmap->bs,j,n,bs2=a->bs2,ncols,k; 655d9ca1df4SBarry Smith const PetscInt *idx,*aj,*ii; 65698c9bda7SSatish Balay PetscInt nonzerorow=0; 65749b5e25fSSatish Balay 65849b5e25fSSatish Balay PetscFunctionBegin; 6592dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 660c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 661*59689ffbSStefano Zampini ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 662*59689ffbSStefano Zampini ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 663*59689ffbSStefano Zampini 664*59689ffbSStefano Zampini x_ptr = x; 665*59689ffbSStefano Zampini z_ptr = z; 66649b5e25fSSatish Balay 66749b5e25fSSatish Balay aj = a->j; 66849b5e25fSSatish Balay v = a->a; 66949b5e25fSSatish Balay ii = a->i; 67049b5e25fSSatish Balay 67149b5e25fSSatish Balay if (!a->mult_work) { 672854ce69bSBarry Smith ierr = PetscMalloc1(A->rmap->N+1,&a->mult_work);CHKERRQ(ierr); 67349b5e25fSSatish Balay } 67449b5e25fSSatish Balay work = a->mult_work; 67549b5e25fSSatish Balay 67649b5e25fSSatish Balay for (i=0; i<mbs; i++) { 67749b5e25fSSatish Balay n = ii[1] - ii[0]; ncols = n*bs; 67849b5e25fSSatish Balay workt = work; idx=aj+ii[0]; 67998c9bda7SSatish Balay nonzerorow += (n>0); 68049b5e25fSSatish Balay 68149b5e25fSSatish Balay /* upper triangular part */ 68249b5e25fSSatish Balay for (j=0; j<n; j++) { 68349b5e25fSSatish Balay xb = x_ptr + bs*(*idx++); 68449b5e25fSSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 68549b5e25fSSatish Balay workt += bs; 68649b5e25fSSatish Balay } 68749b5e25fSSatish Balay /* z(i*bs:(i+1)*bs-1) += A(i,:)*x */ 68896b95a6bSBarry Smith PetscKernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 68949b5e25fSSatish Balay 69049b5e25fSSatish Balay /* strict lower triangular part */ 691831a3094SHong Zhang idx = aj+ii[0]; 692*59689ffbSStefano Zampini if (n && *idx == i) { 69396b9376eSHong Zhang ncols -= bs; v += bs2; idx++; n--; 694831a3094SHong Zhang } 69596b9376eSHong Zhang 69649b5e25fSSatish Balay if (ncols > 0) { 69749b5e25fSSatish Balay workt = work; 698580bdb30SBarry Smith ierr = PetscArrayzero(workt,ncols);CHKERRQ(ierr); 69996b95a6bSBarry Smith PetscKernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,x,v,workt); 700831a3094SHong Zhang for (j=0; j<n; j++) { 701831a3094SHong Zhang zb = z_ptr + bs*(*idx++); 70249b5e25fSSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k]; 70349b5e25fSSatish Balay workt += bs; 70449b5e25fSSatish Balay } 70549b5e25fSSatish Balay } 70649b5e25fSSatish Balay x += bs; v += n*bs2; z += bs; ii++; 70749b5e25fSSatish Balay } 70849b5e25fSSatish Balay 709d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 7101ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 711dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*(a->nz*2.0 - nonzerorow)*bs2 - nonzerorow);CHKERRQ(ierr); 71249b5e25fSSatish Balay PetscFunctionReturn(0); 71349b5e25fSSatish Balay } 71449b5e25fSSatish Balay 715dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_1(Mat A,Vec xx,Vec yy,Vec zz) 71649b5e25fSSatish Balay { 71749b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 718d9ca1df4SBarry Smith PetscScalar *z,x1; 719d9ca1df4SBarry Smith const PetscScalar *x,*xb; 720d9ca1df4SBarry Smith const MatScalar *v; 7216849ba73SBarry Smith PetscErrorCode ierr; 722d9ca1df4SBarry Smith PetscInt mbs =a->mbs,i,n,cval,j,jmin; 723d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 72498c9bda7SSatish Balay PetscInt nonzerorow=0; 725eb1ec7c1SStefano Zampini #if defined(PETSC_USE_COMPLEX) 726eb1ec7c1SStefano Zampini const int aconj = A->hermitian; 727eb1ec7c1SStefano Zampini #else 728eb1ec7c1SStefano Zampini const int aconj = 0; 729eb1ec7c1SStefano Zampini #endif 73049b5e25fSSatish Balay 73149b5e25fSSatish Balay PetscFunctionBegin; 732343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 733c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 734d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 7351ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 73649b5e25fSSatish Balay v = a->a; 73749b5e25fSSatish Balay xb = x; 73849b5e25fSSatish Balay 73949b5e25fSSatish Balay for (i=0; i<mbs; i++) { 74049b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th row of A */ 74149b5e25fSSatish Balay x1 = xb[0]; 74249b5e25fSSatish Balay ib = aj + *ai; 743831a3094SHong Zhang jmin = 0; 74498c9bda7SSatish Balay nonzerorow += (n>0); 7453d9ade75SStefano Zampini if (n && *ib == i) { /* (diag of A)*x */ 746831a3094SHong Zhang z[i] += *v++ * x[*ib++]; jmin++; 747831a3094SHong Zhang } 748eb1ec7c1SStefano Zampini if (aconj) { 749eb1ec7c1SStefano Zampini for (j=jmin; j<n; j++) { 750eb1ec7c1SStefano Zampini cval = *ib; 751eb1ec7c1SStefano Zampini z[cval] += PetscConj(*v) * x1; /* (strict lower triangular part of A)*x */ 752eb1ec7c1SStefano Zampini z[i] += *v++ * x[*ib++]; /* (strict upper triangular part of A)*x */ 753eb1ec7c1SStefano Zampini } 754eb1ec7c1SStefano Zampini } else { 755831a3094SHong Zhang for (j=jmin; j<n; j++) { 75649b5e25fSSatish Balay cval = *ib; 75749b5e25fSSatish Balay z[cval] += *v * x1; /* (strict lower triangular part of A)*x */ 75849b5e25fSSatish Balay z[i] += *v++ * x[*ib++]; /* (strict upper triangular part of A)*x */ 75949b5e25fSSatish Balay } 760eb1ec7c1SStefano Zampini } 76149b5e25fSSatish Balay xb++; ai++; 76249b5e25fSSatish Balay } 76349b5e25fSSatish Balay 764d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 765bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 76649b5e25fSSatish Balay 767dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 76849b5e25fSSatish Balay PetscFunctionReturn(0); 76949b5e25fSSatish Balay } 77049b5e25fSSatish Balay 771dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 77249b5e25fSSatish Balay { 77349b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 774d9ca1df4SBarry Smith PetscScalar *z,x1,x2; 775d9ca1df4SBarry Smith const PetscScalar *x,*xb; 776d9ca1df4SBarry Smith const MatScalar *v; 7776849ba73SBarry Smith PetscErrorCode ierr; 778d9ca1df4SBarry Smith PetscInt mbs =a->mbs,i,n,cval,j,jmin; 779d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 78098c9bda7SSatish Balay PetscInt nonzerorow=0; 78149b5e25fSSatish Balay 78249b5e25fSSatish Balay PetscFunctionBegin; 783343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 784c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 785d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 7861ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 78749b5e25fSSatish Balay 78849b5e25fSSatish Balay v = a->a; 78949b5e25fSSatish Balay xb = x; 79049b5e25fSSatish Balay 79149b5e25fSSatish Balay for (i=0; i<mbs; i++) { 79249b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 79349b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; 79449b5e25fSSatish Balay ib = aj + *ai; 795831a3094SHong Zhang jmin = 0; 79698c9bda7SSatish Balay nonzerorow += (n>0); 797*59689ffbSStefano Zampini if (n && *ib == i) { /* (diag of A)*x */ 79849b5e25fSSatish Balay z[2*i] += v[0]*x1 + v[2]*x2; 79949b5e25fSSatish Balay z[2*i+1] += v[2]*x1 + v[3]*x2; 800831a3094SHong Zhang v += 4; jmin++; 8017fbae186SHong Zhang } 802444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 803444d8c10SJed Brown PetscPrefetchBlock(v+4*n,4*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 804831a3094SHong Zhang for (j=jmin; j<n; j++) { 80549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 80649b5e25fSSatish Balay cval = ib[j]*2; 80749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2; 80849b5e25fSSatish Balay z[cval+1] += v[2]*x1 + v[3]*x2; 80949b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 81049b5e25fSSatish Balay z[2*i] += v[0]*x[cval] + v[2]*x[cval+1]; 81149b5e25fSSatish Balay z[2*i+1] += v[1]*x[cval] + v[3]*x[cval+1]; 81249b5e25fSSatish Balay v += 4; 81349b5e25fSSatish Balay } 81449b5e25fSSatish Balay xb +=2; ai++; 81549b5e25fSSatish Balay } 816d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 817bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 81849b5e25fSSatish Balay 819dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 82049b5e25fSSatish Balay PetscFunctionReturn(0); 82149b5e25fSSatish Balay } 82249b5e25fSSatish Balay 823dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 82449b5e25fSSatish Balay { 82549b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 826d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3; 827d9ca1df4SBarry Smith const PetscScalar *x,*xb; 828d9ca1df4SBarry Smith const MatScalar *v; 8296849ba73SBarry Smith PetscErrorCode ierr; 830d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 831d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 83298c9bda7SSatish Balay PetscInt nonzerorow=0; 83349b5e25fSSatish Balay 83449b5e25fSSatish Balay PetscFunctionBegin; 835343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 836c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 837d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8381ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 83949b5e25fSSatish Balay 84049b5e25fSSatish Balay v = a->a; 84149b5e25fSSatish Balay xb = x; 84249b5e25fSSatish Balay 84349b5e25fSSatish Balay for (i=0; i<mbs; i++) { 84449b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 84549b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 84649b5e25fSSatish Balay ib = aj + *ai; 847831a3094SHong Zhang jmin = 0; 84898c9bda7SSatish Balay nonzerorow += (n>0); 849*59689ffbSStefano Zampini if (n && *ib == i) { /* (diag of A)*x */ 85049b5e25fSSatish Balay z[3*i] += v[0]*x1 + v[3]*x2 + v[6]*x3; 85149b5e25fSSatish Balay z[3*i+1] += v[3]*x1 + v[4]*x2 + v[7]*x3; 85249b5e25fSSatish Balay z[3*i+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 853831a3094SHong Zhang v += 9; jmin++; 8547fbae186SHong Zhang } 855444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 856444d8c10SJed Brown PetscPrefetchBlock(v+9*n,9*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 857831a3094SHong Zhang for (j=jmin; j<n; j++) { 85849b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 85949b5e25fSSatish Balay cval = ib[j]*3; 86049b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3; 86149b5e25fSSatish Balay z[cval+1] += v[3]*x1 + v[4]*x2 + v[5]*x3; 86249b5e25fSSatish Balay z[cval+2] += v[6]*x1 + v[7]*x2 + v[8]*x3; 86349b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 86449b5e25fSSatish Balay z[3*i] += v[0]*x[cval] + v[3]*x[cval+1]+ v[6]*x[cval+2]; 86549b5e25fSSatish Balay z[3*i+1] += v[1]*x[cval] + v[4]*x[cval+1]+ v[7]*x[cval+2]; 86649b5e25fSSatish Balay z[3*i+2] += v[2]*x[cval] + v[5]*x[cval+1]+ v[8]*x[cval+2]; 86749b5e25fSSatish Balay v += 9; 86849b5e25fSSatish Balay } 86949b5e25fSSatish Balay xb +=3; ai++; 87049b5e25fSSatish Balay } 87149b5e25fSSatish Balay 872d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 873bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 87449b5e25fSSatish Balay 875dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 87649b5e25fSSatish Balay PetscFunctionReturn(0); 87749b5e25fSSatish Balay } 87849b5e25fSSatish Balay 879dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 88049b5e25fSSatish Balay { 88149b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 882d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4; 883d9ca1df4SBarry Smith const PetscScalar *x,*xb; 884d9ca1df4SBarry Smith const MatScalar *v; 8856849ba73SBarry Smith PetscErrorCode ierr; 886d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 887d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 88898c9bda7SSatish Balay PetscInt nonzerorow=0; 88949b5e25fSSatish Balay 89049b5e25fSSatish Balay PetscFunctionBegin; 891343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 892c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 893d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 8941ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 89549b5e25fSSatish Balay 89649b5e25fSSatish Balay v = a->a; 89749b5e25fSSatish Balay xb = x; 89849b5e25fSSatish Balay 89949b5e25fSSatish Balay for (i=0; i<mbs; i++) { 90049b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 90149b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 90249b5e25fSSatish Balay ib = aj + *ai; 903831a3094SHong Zhang jmin = 0; 90498c9bda7SSatish Balay nonzerorow += (n>0); 905*59689ffbSStefano Zampini if (n && *ib == i) { /* (diag of A)*x */ 90649b5e25fSSatish Balay z[4*i] += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 90749b5e25fSSatish Balay z[4*i+1] += v[4]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 90849b5e25fSSatish Balay z[4*i+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[14]*x4; 90949b5e25fSSatish Balay z[4*i+3] += v[12]*x1+ v[13]*x2+ v[14]*x3 + v[15]*x4; 910831a3094SHong Zhang v += 16; jmin++; 9117fbae186SHong Zhang } 912444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 913444d8c10SJed Brown PetscPrefetchBlock(v+16*n,16*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 914831a3094SHong Zhang for (j=jmin; j<n; j++) { 91549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 91649b5e25fSSatish Balay cval = ib[j]*4; 91749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 91849b5e25fSSatish Balay z[cval+1] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 91949b5e25fSSatish Balay z[cval+2] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 92049b5e25fSSatish Balay z[cval+3] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 92149b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 92249b5e25fSSatish Balay z[4*i] += v[0]*x[cval] + v[4]*x[cval+1]+ v[8]*x[cval+2] + v[12]*x[cval+3]; 92349b5e25fSSatish Balay z[4*i+1] += v[1]*x[cval] + v[5]*x[cval+1]+ v[9]*x[cval+2] + v[13]*x[cval+3]; 92449b5e25fSSatish Balay z[4*i+2] += v[2]*x[cval] + v[6]*x[cval+1]+ v[10]*x[cval+2]+ v[14]*x[cval+3]; 92549b5e25fSSatish Balay z[4*i+3] += v[3]*x[cval] + v[7]*x[cval+1]+ v[11]*x[cval+2]+ v[15]*x[cval+3]; 92649b5e25fSSatish Balay v += 16; 92749b5e25fSSatish Balay } 92849b5e25fSSatish Balay xb +=4; ai++; 92949b5e25fSSatish Balay } 93049b5e25fSSatish Balay 931d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 932bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 93349b5e25fSSatish Balay 934dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 93549b5e25fSSatish Balay PetscFunctionReturn(0); 93649b5e25fSSatish Balay } 93749b5e25fSSatish Balay 938dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 93949b5e25fSSatish Balay { 94049b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 941d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4,x5; 942d9ca1df4SBarry Smith const PetscScalar *x,*xb; 943d9ca1df4SBarry Smith const MatScalar *v; 9446849ba73SBarry Smith PetscErrorCode ierr; 945d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 946d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 94798c9bda7SSatish Balay PetscInt nonzerorow=0; 94849b5e25fSSatish Balay 94949b5e25fSSatish Balay PetscFunctionBegin; 950343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 951c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 952d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 9531ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 95449b5e25fSSatish Balay 95549b5e25fSSatish Balay v = a->a; 95649b5e25fSSatish Balay xb = x; 95749b5e25fSSatish Balay 95849b5e25fSSatish Balay for (i=0; i<mbs; i++) { 95949b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 96049b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; 96149b5e25fSSatish Balay ib = aj + *ai; 962831a3094SHong Zhang jmin = 0; 96398c9bda7SSatish Balay nonzerorow += (n>0); 964*59689ffbSStefano Zampini if (n && *ib == i) { /* (diag of A)*x */ 96549b5e25fSSatish Balay z[5*i] += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4+ v[20]*x5; 96649b5e25fSSatish Balay z[5*i+1] += v[5]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4+ v[21]*x5; 96749b5e25fSSatish Balay z[5*i+2] += v[10]*x1 +v[11]*x2 + v[12]*x3 + v[17]*x4+ v[22]*x5; 96849b5e25fSSatish Balay z[5*i+3] += v[15]*x1 +v[16]*x2 + v[17]*x3 + v[18]*x4+ v[23]*x5; 96949b5e25fSSatish Balay z[5*i+4] += v[20]*x1 +v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 970831a3094SHong Zhang v += 25; jmin++; 9717fbae186SHong Zhang } 972444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 973444d8c10SJed Brown PetscPrefetchBlock(v+25*n,25*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 974831a3094SHong Zhang for (j=jmin; j<n; j++) { 97549b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 97649b5e25fSSatish Balay cval = ib[j]*5; 97749b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 97849b5e25fSSatish Balay z[cval+1] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 97949b5e25fSSatish Balay z[cval+2] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4+ v[14]*x5; 98049b5e25fSSatish Balay z[cval+3] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4+ v[19]*x5; 98149b5e25fSSatish Balay z[cval+4] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4+ v[24]*x5; 98249b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 98349b5e25fSSatish Balay z[5*i] +=v[0]*x[cval]+v[5]*x[cval+1]+v[10]*x[cval+2]+v[15]*x[cval+3]+v[20]*x[cval+4]; 98449b5e25fSSatish Balay z[5*i+1] +=v[1]*x[cval]+v[6]*x[cval+1]+v[11]*x[cval+2]+v[16]*x[cval+3]+v[21]*x[cval+4]; 98549b5e25fSSatish Balay z[5*i+2] +=v[2]*x[cval]+v[7]*x[cval+1]+v[12]*x[cval+2]+v[17]*x[cval+3]+v[22]*x[cval+4]; 98649b5e25fSSatish Balay z[5*i+3] +=v[3]*x[cval]+v[8]*x[cval+1]+v[13]*x[cval+2]+v[18]*x[cval+3]+v[23]*x[cval+4]; 98749b5e25fSSatish Balay z[5*i+4] +=v[4]*x[cval]+v[9]*x[cval+1]+v[14]*x[cval+2]+v[19]*x[cval+3]+v[24]*x[cval+4]; 98849b5e25fSSatish Balay v += 25; 98949b5e25fSSatish Balay } 99049b5e25fSSatish Balay xb +=5; ai++; 99149b5e25fSSatish Balay } 99249b5e25fSSatish Balay 993d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 994bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 99549b5e25fSSatish Balay 996dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 99749b5e25fSSatish Balay PetscFunctionReturn(0); 99849b5e25fSSatish Balay } 999c2916339SPierre Jolivet 1000dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 100149b5e25fSSatish Balay { 100249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1003d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4,x5,x6; 1004d9ca1df4SBarry Smith const PetscScalar *x,*xb; 1005d9ca1df4SBarry Smith const MatScalar *v; 10066849ba73SBarry Smith PetscErrorCode ierr; 1007d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 1008d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 100998c9bda7SSatish Balay PetscInt nonzerorow=0; 101049b5e25fSSatish Balay 101149b5e25fSSatish Balay PetscFunctionBegin; 1012343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 1013c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 1014d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 10151ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 101649b5e25fSSatish Balay 101749b5e25fSSatish Balay v = a->a; 101849b5e25fSSatish Balay xb = x; 101949b5e25fSSatish Balay 102049b5e25fSSatish Balay for (i=0; i<mbs; i++) { 102149b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 102249b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; 102349b5e25fSSatish Balay ib = aj + *ai; 1024831a3094SHong Zhang jmin = 0; 102598c9bda7SSatish Balay nonzerorow += (n>0); 1026*59689ffbSStefano Zampini if (n && *ib == i) { /* (diag of A)*x */ 102749b5e25fSSatish Balay z[6*i] += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4+ v[24]*x5 + v[30]*x6; 102849b5e25fSSatish Balay z[6*i+1] += v[6]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4+ v[25]*x5 + v[31]*x6; 102949b5e25fSSatish Balay z[6*i+2] += v[12]*x1 +v[13]*x2 + v[14]*x3 + v[20]*x4+ v[26]*x5 + v[32]*x6; 103049b5e25fSSatish Balay z[6*i+3] += v[18]*x1 +v[19]*x2 + v[20]*x3 + v[21]*x4+ v[27]*x5 + v[33]*x6; 103149b5e25fSSatish Balay z[6*i+4] += v[24]*x1 +v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[34]*x6; 103249b5e25fSSatish Balay z[6*i+5] += v[30]*x1 +v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 1033831a3094SHong Zhang v += 36; jmin++; 10347fbae186SHong Zhang } 1035444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1036444d8c10SJed Brown PetscPrefetchBlock(v+36*n,36*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1037831a3094SHong Zhang for (j=jmin; j<n; j++) { 103849b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 103949b5e25fSSatish Balay cval = ib[j]*6; 104049b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6; 104149b5e25fSSatish Balay z[cval+1] += v[6]*x1 + v[7]*x2 + v[8]*x3 + v[9]*x4+ v[10]*x5 + v[11]*x6; 104249b5e25fSSatish Balay z[cval+2] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4+ v[16]*x5 + v[17]*x6; 104349b5e25fSSatish Balay z[cval+3] += v[18]*x1 + v[19]*x2 + v[20]*x3 + v[21]*x4+ v[22]*x5 + v[23]*x6; 104449b5e25fSSatish Balay z[cval+4] += v[24]*x1 + v[25]*x2 + v[26]*x3 + v[27]*x4+ v[28]*x5 + v[29]*x6; 104549b5e25fSSatish Balay z[cval+5] += v[30]*x1 + v[31]*x2 + v[32]*x3 + v[33]*x4+ v[34]*x5 + v[35]*x6; 104649b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 104749b5e25fSSatish Balay z[6*i] +=v[0]*x[cval]+v[6]*x[cval+1]+v[12]*x[cval+2]+v[18]*x[cval+3]+v[24]*x[cval+4]+v[30]*x[cval+5]; 104849b5e25fSSatish Balay z[6*i+1] +=v[1]*x[cval]+v[7]*x[cval+1]+v[13]*x[cval+2]+v[19]*x[cval+3]+v[25]*x[cval+4]+v[31]*x[cval+5]; 104949b5e25fSSatish Balay z[6*i+2] +=v[2]*x[cval]+v[8]*x[cval+1]+v[14]*x[cval+2]+v[20]*x[cval+3]+v[26]*x[cval+4]+v[32]*x[cval+5]; 105049b5e25fSSatish Balay z[6*i+3] +=v[3]*x[cval]+v[9]*x[cval+1]+v[15]*x[cval+2]+v[21]*x[cval+3]+v[27]*x[cval+4]+v[33]*x[cval+5]; 105149b5e25fSSatish Balay z[6*i+4] +=v[4]*x[cval]+v[10]*x[cval+1]+v[16]*x[cval+2]+v[22]*x[cval+3]+v[28]*x[cval+4]+v[34]*x[cval+5]; 105249b5e25fSSatish Balay z[6*i+5] +=v[5]*x[cval]+v[11]*x[cval+1]+v[17]*x[cval+2]+v[23]*x[cval+3]+v[29]*x[cval+4]+v[35]*x[cval+5]; 105349b5e25fSSatish Balay v += 36; 105449b5e25fSSatish Balay } 105549b5e25fSSatish Balay xb +=6; ai++; 105649b5e25fSSatish Balay } 105749b5e25fSSatish Balay 1058d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1059bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 106049b5e25fSSatish Balay 1061dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 106249b5e25fSSatish Balay PetscFunctionReturn(0); 106349b5e25fSSatish Balay } 106449b5e25fSSatish Balay 1065dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 106649b5e25fSSatish Balay { 106749b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1068d9ca1df4SBarry Smith PetscScalar *z,x1,x2,x3,x4,x5,x6,x7; 1069d9ca1df4SBarry Smith const PetscScalar *x,*xb; 1070d9ca1df4SBarry Smith const MatScalar *v; 10716849ba73SBarry Smith PetscErrorCode ierr; 1072d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,n,cval,j,jmin; 1073d9ca1df4SBarry Smith const PetscInt *aj=a->j,*ai=a->i,*ib; 107498c9bda7SSatish Balay PetscInt nonzerorow=0; 107549b5e25fSSatish Balay 107649b5e25fSSatish Balay PetscFunctionBegin; 1077343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 1078c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 1079d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); 10801ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 108149b5e25fSSatish Balay 108249b5e25fSSatish Balay v = a->a; 108349b5e25fSSatish Balay xb = x; 108449b5e25fSSatish Balay 108549b5e25fSSatish Balay for (i=0; i<mbs; i++) { 108649b5e25fSSatish Balay n = ai[1] - ai[0]; /* length of i_th block row of A */ 108749b5e25fSSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5=xb[4]; x6=xb[5]; x7=xb[6]; 108849b5e25fSSatish Balay ib = aj + *ai; 1089831a3094SHong Zhang jmin = 0; 109098c9bda7SSatish Balay nonzerorow += (n>0); 1091*59689ffbSStefano Zampini if (n && *ib == i) { /* (diag of A)*x */ 109249b5e25fSSatish Balay z[7*i] += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4+ v[28]*x5 + v[35]*x6+ v[42]*x7; 109349b5e25fSSatish Balay z[7*i+1] += v[7]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4+ v[29]*x5 + v[36]*x6+ v[43]*x7; 109449b5e25fSSatish Balay z[7*i+2] += v[14]*x1+ v[15]*x2 +v[16]*x3 + v[23]*x4+ v[30]*x5 + v[37]*x6+ v[44]*x7; 109549b5e25fSSatish Balay z[7*i+3] += v[21]*x1+ v[22]*x2 +v[23]*x3 + v[24]*x4+ v[31]*x5 + v[38]*x6+ v[45]*x7; 109649b5e25fSSatish Balay z[7*i+4] += v[28]*x1+ v[29]*x2 +v[30]*x3 + v[31]*x4+ v[32]*x5 + v[39]*x6+ v[46]*x7; 109749b5e25fSSatish Balay z[7*i+5] += v[35]*x1+ v[36]*x2 +v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[47]*x7; 109849b5e25fSSatish Balay z[7*i+6] += v[42]*x1+ v[43]*x2 +v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 1099831a3094SHong Zhang v += 49; jmin++; 11007fbae186SHong Zhang } 1101444d8c10SJed Brown PetscPrefetchBlock(ib+jmin+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1102444d8c10SJed Brown PetscPrefetchBlock(v+49*n,49*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1103831a3094SHong Zhang for (j=jmin; j<n; j++) { 110449b5e25fSSatish Balay /* (strict lower triangular part of A)*x */ 110549b5e25fSSatish Balay cval = ib[j]*7; 110649b5e25fSSatish Balay z[cval] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4+ v[4]*x5 + v[5]*x6+ v[6]*x7; 110749b5e25fSSatish Balay z[cval+1] += v[7]*x1 + v[8]*x2 + v[9]*x3 + v[10]*x4+ v[11]*x5 + v[12]*x6+ v[13]*x7; 110849b5e25fSSatish Balay z[cval+2] += v[14]*x1 + v[15]*x2 + v[16]*x3 + v[17]*x4+ v[18]*x5 + v[19]*x6+ v[20]*x7; 110949b5e25fSSatish Balay z[cval+3] += v[21]*x1 + v[22]*x2 + v[23]*x3 + v[24]*x4+ v[25]*x5 + v[26]*x6+ v[27]*x7; 111049b5e25fSSatish Balay z[cval+4] += v[28]*x1 + v[29]*x2 + v[30]*x3 + v[31]*x4+ v[32]*x5 + v[33]*x6+ v[34]*x7; 111149b5e25fSSatish Balay z[cval+5] += v[35]*x1 + v[36]*x2 + v[37]*x3 + v[38]*x4+ v[39]*x5 + v[40]*x6+ v[41]*x7; 111249b5e25fSSatish Balay z[cval+6] += v[42]*x1 + v[43]*x2 + v[44]*x3 + v[45]*x4+ v[46]*x5 + v[47]*x6+ v[48]*x7; 111349b5e25fSSatish Balay /* (strict upper triangular part of A)*x */ 111449b5e25fSSatish Balay z[7*i] +=v[0]*x[cval]+v[7]*x[cval+1]+v[14]*x[cval+2]+v[21]*x[cval+3]+v[28]*x[cval+4]+v[35]*x[cval+5]+v[42]*x[cval+6]; 111549b5e25fSSatish Balay z[7*i+1]+=v[1]*x[cval]+v[8]*x[cval+1]+v[15]*x[cval+2]+v[22]*x[cval+3]+v[29]*x[cval+4]+v[36]*x[cval+5]+v[43]*x[cval+6]; 111649b5e25fSSatish Balay z[7*i+2]+=v[2]*x[cval]+v[9]*x[cval+1]+v[16]*x[cval+2]+v[23]*x[cval+3]+v[30]*x[cval+4]+v[37]*x[cval+5]+v[44]*x[cval+6]; 111749b5e25fSSatish Balay z[7*i+3]+=v[3]*x[cval]+v[10]*x[cval+1]+v[17]*x[cval+2]+v[24]*x[cval+3]+v[31]*x[cval+4]+v[38]*x[cval+5]+v[45]*x[cval+6]; 111849b5e25fSSatish Balay z[7*i+4]+=v[4]*x[cval]+v[11]*x[cval+1]+v[18]*x[cval+2]+v[25]*x[cval+3]+v[32]*x[cval+4]+v[39]*x[cval+5]+v[46]*x[cval+6]; 111949b5e25fSSatish Balay z[7*i+5]+=v[5]*x[cval]+v[12]*x[cval+1]+v[19]*x[cval+2]+v[26]*x[cval+3]+v[33]*x[cval+4]+v[40]*x[cval+5]+v[47]*x[cval+6]; 112049b5e25fSSatish Balay z[7*i+6]+=v[6]*x[cval]+v[13]*x[cval+1]+v[20]*x[cval+2]+v[27]*x[cval+3]+v[34]*x[cval+4]+v[41]*x[cval+5]+v[48]*x[cval+6]; 112149b5e25fSSatish Balay v += 49; 112249b5e25fSSatish Balay } 112349b5e25fSSatish Balay xb +=7; ai++; 112449b5e25fSSatish Balay } 112549b5e25fSSatish Balay 1126d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1127bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 112849b5e25fSSatish Balay 1129dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 113049b5e25fSSatish Balay PetscFunctionReturn(0); 113149b5e25fSSatish Balay } 113249b5e25fSSatish Balay 1133dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqSBAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 113449b5e25fSSatish Balay { 113549b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1136d9ca1df4SBarry Smith PetscScalar *z,*z_ptr=0,*zb,*work,*workt; 1137d9ca1df4SBarry Smith const PetscScalar *x,*x_ptr,*xb; 1138d9ca1df4SBarry Smith const MatScalar *v; 1139dfbe8321SBarry Smith PetscErrorCode ierr; 1140d9ca1df4SBarry Smith PetscInt mbs = a->mbs,i,bs=A->rmap->bs,j,n,bs2=a->bs2,ncols,k; 1141d9ca1df4SBarry Smith const PetscInt *idx,*aj,*ii; 114298c9bda7SSatish Balay PetscInt nonzerorow=0; 114349b5e25fSSatish Balay 114449b5e25fSSatish Balay PetscFunctionBegin; 1145343551c4SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 1146c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 1147d9ca1df4SBarry Smith ierr = VecGetArrayRead(xx,&x);CHKERRQ(ierr); x_ptr=x; 11481ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); z_ptr=z; 114949b5e25fSSatish Balay 115049b5e25fSSatish Balay aj = a->j; 115149b5e25fSSatish Balay v = a->a; 115249b5e25fSSatish Balay ii = a->i; 115349b5e25fSSatish Balay 115449b5e25fSSatish Balay if (!a->mult_work) { 1155854ce69bSBarry Smith ierr = PetscMalloc1(A->rmap->n+1,&a->mult_work);CHKERRQ(ierr); 115649b5e25fSSatish Balay } 115749b5e25fSSatish Balay work = a->mult_work; 115849b5e25fSSatish Balay 115949b5e25fSSatish Balay 116049b5e25fSSatish Balay for (i=0; i<mbs; i++) { 116149b5e25fSSatish Balay n = ii[1] - ii[0]; ncols = n*bs; 116249b5e25fSSatish Balay workt = work; idx=aj+ii[0]; 116398c9bda7SSatish Balay nonzerorow += (n>0); 116449b5e25fSSatish Balay 116549b5e25fSSatish Balay /* upper triangular part */ 116649b5e25fSSatish Balay for (j=0; j<n; j++) { 116749b5e25fSSatish Balay xb = x_ptr + bs*(*idx++); 116849b5e25fSSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 116949b5e25fSSatish Balay workt += bs; 117049b5e25fSSatish Balay } 117149b5e25fSSatish Balay /* z(i*bs:(i+1)*bs-1) += A(i,:)*x */ 117296b95a6bSBarry Smith PetscKernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 117349b5e25fSSatish Balay 117449b5e25fSSatish Balay /* strict lower triangular part */ 1175831a3094SHong Zhang idx = aj+ii[0]; 1176*59689ffbSStefano Zampini if (n && *idx == i) { 117796b9376eSHong Zhang ncols -= bs; v += bs2; idx++; n--; 1178831a3094SHong Zhang } 117949b5e25fSSatish Balay if (ncols > 0) { 118049b5e25fSSatish Balay workt = work; 1181580bdb30SBarry Smith ierr = PetscArrayzero(workt,ncols);CHKERRQ(ierr); 118296b95a6bSBarry Smith PetscKernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,x,v,workt); 1183831a3094SHong Zhang for (j=0; j<n; j++) { 1184831a3094SHong Zhang zb = z_ptr + bs*(*idx++); 118549b5e25fSSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k]; 118649b5e25fSSatish Balay workt += bs; 118749b5e25fSSatish Balay } 118849b5e25fSSatish Balay } 118949b5e25fSSatish Balay 119049b5e25fSSatish Balay x += bs; v += n*bs2; z += bs; ii++; 119149b5e25fSSatish Balay } 119249b5e25fSSatish Balay 1193d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(xx,&x);CHKERRQ(ierr); 1194bba805e6SBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 119549b5e25fSSatish Balay 1196dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*(a->nz*2.0 - nonzerorow));CHKERRQ(ierr); 119749b5e25fSSatish Balay PetscFunctionReturn(0); 119849b5e25fSSatish Balay } 119949b5e25fSSatish Balay 1200f4df32b1SMatthew Knepley PetscErrorCode MatScale_SeqSBAIJ(Mat inA,PetscScalar alpha) 120149b5e25fSSatish Balay { 120249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)inA->data; 1203f4df32b1SMatthew Knepley PetscScalar oalpha = alpha; 1204efee365bSSatish Balay PetscErrorCode ierr; 1205c5df96a5SBarry Smith PetscBLASInt one = 1,totalnz; 120649b5e25fSSatish Balay 120749b5e25fSSatish Balay PetscFunctionBegin; 1208c5df96a5SBarry Smith ierr = PetscBLASIntCast(a->bs2*a->nz,&totalnz);CHKERRQ(ierr); 12098b83055fSJed Brown PetscStackCallBLAS("BLASscal",BLASscal_(&totalnz,&oalpha,a->a,&one)); 1210efee365bSSatish Balay ierr = PetscLogFlops(totalnz);CHKERRQ(ierr); 121149b5e25fSSatish Balay PetscFunctionReturn(0); 121249b5e25fSSatish Balay } 121349b5e25fSSatish Balay 1214dfbe8321SBarry Smith PetscErrorCode MatNorm_SeqSBAIJ(Mat A,NormType type,PetscReal *norm) 121549b5e25fSSatish Balay { 121649b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1217d9ca1df4SBarry Smith const MatScalar *v = a->a; 121849b5e25fSSatish Balay PetscReal sum_diag = 0.0, sum_off = 0.0, *sum; 1219d9ca1df4SBarry Smith PetscInt i,j,k,bs = A->rmap->bs,bs2=a->bs2,k1,mbs=a->mbs,jmin,jmax,nexti,ik,*jl,*il; 12206849ba73SBarry Smith PetscErrorCode ierr; 1221d9ca1df4SBarry Smith const PetscInt *aj=a->j,*col; 122249b5e25fSSatish Balay 122349b5e25fSSatish Balay PetscFunctionBegin; 1224c40ae873SPierre Jolivet if (!a->nz) { 1225c40ae873SPierre Jolivet *norm = 0.0; 1226c40ae873SPierre Jolivet PetscFunctionReturn(0); 1227c40ae873SPierre Jolivet } 122849b5e25fSSatish Balay if (type == NORM_FROBENIUS) { 122949b5e25fSSatish Balay for (k=0; k<mbs; k++) { 1230*59689ffbSStefano Zampini jmin = a->i[k]; 1231*59689ffbSStefano Zampini jmax = a->i[k+1]; 1232831a3094SHong Zhang col = aj + jmin; 1233*59689ffbSStefano Zampini if (jmax-jmin > 0 && *col == k) { /* diagonal block */ 123449b5e25fSSatish Balay for (i=0; i<bs2; i++) { 123549b5e25fSSatish Balay sum_diag += PetscRealPart(PetscConj(*v)*(*v)); v++; 123649b5e25fSSatish Balay } 1237831a3094SHong Zhang jmin++; 1238831a3094SHong Zhang } 1239831a3094SHong Zhang for (j=jmin; j<jmax; j++) { /* off-diagonal blocks */ 124049b5e25fSSatish Balay for (i=0; i<bs2; i++) { 124149b5e25fSSatish Balay sum_off += PetscRealPart(PetscConj(*v)*(*v)); v++; 124249b5e25fSSatish Balay } 124349b5e25fSSatish Balay } 124449b5e25fSSatish Balay } 12458f1a2a5eSBarry Smith *norm = PetscSqrtReal(sum_diag + 2*sum_off); 124651f70360SJed Brown ierr = PetscLogFlops(2*bs2*a->nz);CHKERRQ(ierr); 12470b8dc8d2SHong Zhang } else if (type == NORM_INFINITY || type == NORM_1) { /* maximum row/column sum */ 1248dcca6d9dSJed Brown ierr = PetscMalloc3(bs,&sum,mbs,&il,mbs,&jl);CHKERRQ(ierr); 12490b8dc8d2SHong Zhang for (i=0; i<mbs; i++) jl[i] = mbs; 12500b8dc8d2SHong Zhang il[0] = 0; 125149b5e25fSSatish Balay 125249b5e25fSSatish Balay *norm = 0.0; 125349b5e25fSSatish Balay for (k=0; k<mbs; k++) { /* k_th block row */ 125449b5e25fSSatish Balay for (j=0; j<bs; j++) sum[j]=0.0; 125549b5e25fSSatish Balay /*-- col sum --*/ 125649b5e25fSSatish Balay i = jl[k]; /* first |A(i,k)| to be added */ 1257831a3094SHong Zhang /* jl[k]=i: first nozero element in row i for submatrix A(1:k,k:n) (active window) 1258831a3094SHong Zhang at step k */ 125949b5e25fSSatish Balay while (i<mbs) { 126049b5e25fSSatish Balay nexti = jl[i]; /* next block row to be added */ 126149b5e25fSSatish Balay ik = il[i]; /* block index of A(i,k) in the array a */ 126249b5e25fSSatish Balay for (j=0; j<bs; j++) { 126349b5e25fSSatish Balay v = a->a + ik*bs2 + j*bs; 126449b5e25fSSatish Balay for (k1=0; k1<bs; k1++) { 126549b5e25fSSatish Balay sum[j] += PetscAbsScalar(*v); v++; 126649b5e25fSSatish Balay } 126749b5e25fSSatish Balay } 126849b5e25fSSatish Balay /* update il, jl */ 1269831a3094SHong Zhang jmin = ik + 1; /* block index of array a: points to the next nonzero of A in row i */ 1270831a3094SHong Zhang jmax = a->i[i+1]; 127149b5e25fSSatish Balay if (jmin < jmax) { 127249b5e25fSSatish Balay il[i] = jmin; 127349b5e25fSSatish Balay j = a->j[jmin]; 127449b5e25fSSatish Balay jl[i] = jl[j]; jl[j]=i; 127549b5e25fSSatish Balay } 127649b5e25fSSatish Balay i = nexti; 127749b5e25fSSatish Balay } 127849b5e25fSSatish Balay /*-- row sum --*/ 1279*59689ffbSStefano Zampini jmin = a->i[k]; 1280*59689ffbSStefano Zampini jmax = a->i[k+1]; 128149b5e25fSSatish Balay for (i=jmin; i<jmax; i++) { 128249b5e25fSSatish Balay for (j=0; j<bs; j++) { 128349b5e25fSSatish Balay v = a->a + i*bs2 + j; 128449b5e25fSSatish Balay for (k1=0; k1<bs; k1++) { 12850b8dc8d2SHong Zhang sum[j] += PetscAbsScalar(*v); v += bs; 128649b5e25fSSatish Balay } 128749b5e25fSSatish Balay } 128849b5e25fSSatish Balay } 128949b5e25fSSatish Balay /* add k_th block row to il, jl */ 1290831a3094SHong Zhang col = aj+jmin; 1291*59689ffbSStefano Zampini if (jmax - jmin > 0 && *col == k) jmin++; 129249b5e25fSSatish Balay if (jmin < jmax) { 129349b5e25fSSatish Balay il[k] = jmin; 12940b8dc8d2SHong Zhang j = a->j[jmin]; jl[k] = jl[j]; jl[j] = k; 129549b5e25fSSatish Balay } 129649b5e25fSSatish Balay for (j=0; j<bs; j++) { 129749b5e25fSSatish Balay if (sum[j] > *norm) *norm = sum[j]; 129849b5e25fSSatish Balay } 129949b5e25fSSatish Balay } 130074ed9c26SBarry Smith ierr = PetscFree3(sum,il,jl);CHKERRQ(ierr); 130151f70360SJed Brown ierr = PetscLogFlops(PetscMax(mbs*a->nz-1,0));CHKERRQ(ierr); 1302f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for this norm yet"); 130349b5e25fSSatish Balay PetscFunctionReturn(0); 130449b5e25fSSatish Balay } 130549b5e25fSSatish Balay 1306ace3abfcSBarry Smith PetscErrorCode MatEqual_SeqSBAIJ(Mat A,Mat B,PetscBool * flg) 130749b5e25fSSatish Balay { 130849b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ*)B->data; 1309dfbe8321SBarry Smith PetscErrorCode ierr; 131049b5e25fSSatish Balay 131149b5e25fSSatish Balay PetscFunctionBegin; 131249b5e25fSSatish Balay /* If the matrix/block dimensions are not equal, or no of nonzeros or shift */ 1313d0f46423SBarry Smith if ((A->rmap->N != B->rmap->N) || (A->cmap->n != B->cmap->n) || (A->rmap->bs != B->rmap->bs)|| (a->nz != b->nz)) { 1314ef511fbeSHong Zhang *flg = PETSC_FALSE; 1315ef511fbeSHong Zhang PetscFunctionReturn(0); 131649b5e25fSSatish Balay } 131749b5e25fSSatish Balay 131849b5e25fSSatish Balay /* if the a->i are the same */ 1319580bdb30SBarry Smith ierr = PetscArraycmp(a->i,b->i,a->mbs+1,flg);CHKERRQ(ierr); 132026fbe8dcSKarl Rupp if (!*flg) PetscFunctionReturn(0); 132149b5e25fSSatish Balay 132249b5e25fSSatish Balay /* if a->j are the same */ 1323580bdb30SBarry Smith ierr = PetscArraycmp(a->j,b->j,a->nz,flg);CHKERRQ(ierr); 132426fbe8dcSKarl Rupp if (!*flg) PetscFunctionReturn(0); 132526fbe8dcSKarl Rupp 132649b5e25fSSatish Balay /* if a->a are the same */ 1327580bdb30SBarry Smith ierr = PetscArraycmp(a->a,b->a,(a->nz)*(A->rmap->bs)*(A->rmap->bs),flg);CHKERRQ(ierr); 1328935af2e7SHong Zhang PetscFunctionReturn(0); 132949b5e25fSSatish Balay } 133049b5e25fSSatish Balay 1331dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_SeqSBAIJ(Mat A,Vec v) 133249b5e25fSSatish Balay { 133349b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1334dfbe8321SBarry Smith PetscErrorCode ierr; 1335d9ca1df4SBarry Smith PetscInt i,j,k,row,bs,ambs,bs2; 1336d9ca1df4SBarry Smith const PetscInt *ai,*aj; 133787828ca2SBarry Smith PetscScalar *x,zero = 0.0; 1338d9ca1df4SBarry Smith const MatScalar *aa,*aa_j; 133949b5e25fSSatish Balay 134049b5e25fSSatish Balay PetscFunctionBegin; 1341d0f46423SBarry Smith bs = A->rmap->bs; 1342e32f2f54SBarry Smith if (A->factortype && bs>1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix with bs>1"); 134382799104SHong Zhang 134449b5e25fSSatish Balay aa = a->a; 13458a0c6efdSHong Zhang ambs = a->mbs; 13468a0c6efdSHong Zhang 13478a0c6efdSHong Zhang if (A->factortype == MAT_FACTOR_CHOLESKY || A->factortype == MAT_FACTOR_ICC) { 13488a0c6efdSHong Zhang PetscInt *diag=a->diag; 13498a0c6efdSHong Zhang aa = a->a; 13508a0c6efdSHong Zhang ambs = a->mbs; 13518a0c6efdSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 13528a0c6efdSHong Zhang for (i=0; i<ambs; i++) x[i] = 1.0/aa[diag[i]]; 13538a0c6efdSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 13548a0c6efdSHong Zhang PetscFunctionReturn(0); 13558a0c6efdSHong Zhang } 13568a0c6efdSHong Zhang 135749b5e25fSSatish Balay ai = a->i; 135849b5e25fSSatish Balay aj = a->j; 135949b5e25fSSatish Balay bs2 = a->bs2; 13602dcb1b2aSMatthew Knepley ierr = VecSet(v,zero);CHKERRQ(ierr); 1361c40ae873SPierre Jolivet if (!a->nz) PetscFunctionReturn(0); 13621ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 136349b5e25fSSatish Balay for (i=0; i<ambs; i++) { 136449b5e25fSSatish Balay j = ai[i]; 136549b5e25fSSatish Balay if (aj[j] == i) { /* if this is a diagonal element */ 136649b5e25fSSatish Balay row = i*bs; 136749b5e25fSSatish Balay aa_j = aa + j*bs2; 136849b5e25fSSatish Balay for (k=0; k<bs2; k+=(bs+1),row++) x[row] = aa_j[k]; 136949b5e25fSSatish Balay } 137049b5e25fSSatish Balay } 13711ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 137249b5e25fSSatish Balay PetscFunctionReturn(0); 137349b5e25fSSatish Balay } 137449b5e25fSSatish Balay 1375dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_SeqSBAIJ(Mat A,Vec ll,Vec rr) 137649b5e25fSSatish Balay { 137749b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1378d9ca1df4SBarry Smith PetscScalar x; 1379d9ca1df4SBarry Smith const PetscScalar *l,*li,*ri; 138049b5e25fSSatish Balay MatScalar *aa,*v; 1381dfbe8321SBarry Smith PetscErrorCode ierr; 1382fff8e43fSBarry Smith PetscInt i,j,k,lm,M,m,mbs,tmp,bs,bs2; 1383fff8e43fSBarry Smith const PetscInt *ai,*aj; 1384ace3abfcSBarry Smith PetscBool flg; 138549b5e25fSSatish Balay 138649b5e25fSSatish Balay PetscFunctionBegin; 1387b3bf805bSHong Zhang if (ll != rr) { 1388b3bf805bSHong Zhang ierr = VecEqual(ll,rr,&flg);CHKERRQ(ierr); 1389e7e72b3dSBarry Smith if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"For symmetric format, left and right scaling vectors must be same\n"); 1390b3bf805bSHong Zhang } 1391b3bf805bSHong Zhang if (!ll) PetscFunctionReturn(0); 139249b5e25fSSatish Balay ai = a->i; 139349b5e25fSSatish Balay aj = a->j; 139449b5e25fSSatish Balay aa = a->a; 1395d0f46423SBarry Smith m = A->rmap->N; 1396d0f46423SBarry Smith bs = A->rmap->bs; 139749b5e25fSSatish Balay mbs = a->mbs; 139849b5e25fSSatish Balay bs2 = a->bs2; 139949b5e25fSSatish Balay 1400d9ca1df4SBarry Smith ierr = VecGetArrayRead(ll,&l);CHKERRQ(ierr); 140149b5e25fSSatish Balay ierr = VecGetLocalSize(ll,&lm);CHKERRQ(ierr); 1402e32f2f54SBarry Smith if (lm != m) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector wrong length"); 140349b5e25fSSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 140449b5e25fSSatish Balay M = ai[i+1] - ai[i]; 140549b5e25fSSatish Balay li = l + i*bs; 140649b5e25fSSatish Balay v = aa + bs2*ai[i]; 140749b5e25fSSatish Balay for (j=0; j<M; j++) { /* for each block */ 140849b5e25fSSatish Balay ri = l + bs*aj[ai[i]+j]; 14095e90f9d9SHong Zhang for (k=0; k<bs; k++) { 141049b5e25fSSatish Balay x = ri[k]; 141149b5e25fSSatish Balay for (tmp=0; tmp<bs; tmp++) (*v++) *= li[tmp]*x; 141249b5e25fSSatish Balay } 141349b5e25fSSatish Balay } 141449b5e25fSSatish Balay } 1415d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(ll,&l);CHKERRQ(ierr); 1416dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz);CHKERRQ(ierr); 141749b5e25fSSatish Balay PetscFunctionReturn(0); 141849b5e25fSSatish Balay } 141949b5e25fSSatish Balay 1420dfbe8321SBarry Smith PetscErrorCode MatGetInfo_SeqSBAIJ(Mat A,MatInfoType flag,MatInfo *info) 142149b5e25fSSatish Balay { 142249b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 142349b5e25fSSatish Balay 142449b5e25fSSatish Balay PetscFunctionBegin; 142549b5e25fSSatish Balay info->block_size = a->bs2; 1426ceed8ce5SJed Brown info->nz_allocated = a->bs2*a->maxnz; /*num. of nonzeros in upper triangular part */ 14276c6c5352SBarry Smith info->nz_used = a->bs2*a->nz; /*num. of nonzeros in upper triangular part */ 14283966268fSBarry Smith info->nz_unneeded = info->nz_allocated - info->nz_used; 142949b5e25fSSatish Balay info->assemblies = A->num_ass; 14308e58a170SBarry Smith info->mallocs = A->info.mallocs; 14317adad957SLisandro Dalcin info->memory = ((PetscObject)A)->mem; 1432d5f3da31SBarry Smith if (A->factortype) { 143349b5e25fSSatish Balay info->fill_ratio_given = A->info.fill_ratio_given; 143449b5e25fSSatish Balay info->fill_ratio_needed = A->info.fill_ratio_needed; 143549b5e25fSSatish Balay info->factor_mallocs = A->info.factor_mallocs; 143649b5e25fSSatish Balay } else { 143749b5e25fSSatish Balay info->fill_ratio_given = 0; 143849b5e25fSSatish Balay info->fill_ratio_needed = 0; 143949b5e25fSSatish Balay info->factor_mallocs = 0; 144049b5e25fSSatish Balay } 144149b5e25fSSatish Balay PetscFunctionReturn(0); 144249b5e25fSSatish Balay } 144349b5e25fSSatish Balay 1444dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_SeqSBAIJ(Mat A) 144549b5e25fSSatish Balay { 144649b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1447dfbe8321SBarry Smith PetscErrorCode ierr; 144849b5e25fSSatish Balay 144949b5e25fSSatish Balay PetscFunctionBegin; 1450580bdb30SBarry Smith ierr = PetscArrayzero(a->a,a->bs2*a->i[a->mbs]);CHKERRQ(ierr); 145149b5e25fSSatish Balay PetscFunctionReturn(0); 145249b5e25fSSatish Balay } 1453dc354874SHong Zhang 1454985db425SBarry Smith /* 1455985db425SBarry Smith This code does not work since it only checks the upper triangular part of 1456985db425SBarry Smith the matrix. Hence it is not listed in the function table. 1457985db425SBarry Smith */ 1458985db425SBarry Smith PetscErrorCode MatGetRowMaxAbs_SeqSBAIJ(Mat A,Vec v,PetscInt idx[]) 1459dc354874SHong Zhang { 1460dc354874SHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1461dfbe8321SBarry Smith PetscErrorCode ierr; 1462d9ca1df4SBarry Smith PetscInt i,j,n,row,col,bs,mbs; 1463d9ca1df4SBarry Smith const PetscInt *ai,*aj; 1464c3fca9a7SHong Zhang PetscReal atmp; 1465d9ca1df4SBarry Smith const MatScalar *aa; 1466985db425SBarry Smith PetscScalar *x; 146713f74950SBarry Smith PetscInt ncols,brow,bcol,krow,kcol; 1468dc354874SHong Zhang 1469dc354874SHong Zhang PetscFunctionBegin; 1470e32f2f54SBarry Smith if (idx) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Send email to petsc-maint@mcs.anl.gov"); 1471e32f2f54SBarry Smith if (A->factortype) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 1472d0f46423SBarry Smith bs = A->rmap->bs; 1473dc354874SHong Zhang aa = a->a; 1474dc354874SHong Zhang ai = a->i; 1475dc354874SHong Zhang aj = a->j; 147644117c81SHong Zhang mbs = a->mbs; 1477dc354874SHong Zhang 1478985db425SBarry Smith ierr = VecSet(v,0.0);CHKERRQ(ierr); 14791ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 1480dc354874SHong Zhang ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); 1481e32f2f54SBarry Smith if (n != A->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming matrix and vector"); 148244117c81SHong Zhang for (i=0; i<mbs; i++) { 1483d0f6400bSHong Zhang ncols = ai[1] - ai[0]; ai++; 1484d0f6400bSHong Zhang brow = bs*i; 148544117c81SHong Zhang for (j=0; j<ncols; j++) { 1486d0f6400bSHong Zhang bcol = bs*(*aj); 148744117c81SHong Zhang for (kcol=0; kcol<bs; kcol++) { 1488d0f6400bSHong Zhang col = bcol + kcol; /* col index */ 148944117c81SHong Zhang for (krow=0; krow<bs; krow++) { 1490d0f6400bSHong Zhang atmp = PetscAbsScalar(*aa); aa++; 1491d0f6400bSHong Zhang row = brow + krow; /* row index */ 1492c3fca9a7SHong Zhang if (PetscRealPart(x[row]) < atmp) x[row] = atmp; 1493c3fca9a7SHong Zhang if (*aj > i && PetscRealPart(x[col]) < atmp) x[col] = atmp; 149444117c81SHong Zhang } 149544117c81SHong Zhang } 1496d0f6400bSHong Zhang aj++; 1497dc354874SHong Zhang } 1498dc354874SHong Zhang } 14991ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 1500dc354874SHong Zhang PetscFunctionReturn(0); 1501dc354874SHong Zhang } 1502c2916339SPierre Jolivet 15034222ddf1SHong Zhang PetscErrorCode MatMatMultSymbolic_SeqSBAIJ_SeqDense(Mat A,Mat B,PetscReal fill,Mat C) 1504c2916339SPierre Jolivet { 1505c2916339SPierre Jolivet PetscErrorCode ierr; 1506c2916339SPierre Jolivet 1507c2916339SPierre Jolivet PetscFunctionBegin; 1508c2916339SPierre Jolivet ierr = MatMatMultSymbolic_SeqDense_SeqDense(A,B,0.0,C);CHKERRQ(ierr); 15094222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_SeqSBAIJ_SeqDense; 1510c2916339SPierre Jolivet PetscFunctionReturn(0); 1511c2916339SPierre Jolivet } 1512c2916339SPierre Jolivet 1513c2916339SPierre Jolivet PetscErrorCode MatMatMult_SeqSBAIJ_1_Private(Mat A,PetscScalar* b,PetscInt bm,PetscScalar* c,PetscInt cm,PetscInt cn) 1514c2916339SPierre Jolivet { 1515c2916339SPierre Jolivet Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1516c2916339SPierre Jolivet PetscScalar *z = c; 1517c2916339SPierre Jolivet const PetscScalar *xb; 1518c2916339SPierre Jolivet PetscScalar x1; 1519c2916339SPierre Jolivet const MatScalar *v = a->a,*vv; 1520c2916339SPierre Jolivet PetscInt mbs = a->mbs,i,*idx = a->j,*ii = a->i,j,*jj,n,k; 15213c2e41e1SStefano Zampini #if defined(PETSC_USE_COMPLEX) 15223c2e41e1SStefano Zampini const int aconj = A->hermitian; 15233c2e41e1SStefano Zampini #else 15243c2e41e1SStefano Zampini const int aconj = 0; 15253c2e41e1SStefano Zampini #endif 1526c2916339SPierre Jolivet 1527c2916339SPierre Jolivet PetscFunctionBegin; 1528c2916339SPierre Jolivet for (i=0; i<mbs; i++) { 1529c2916339SPierre Jolivet n = ii[1] - ii[0]; ii++; 1530c2916339SPierre Jolivet PetscPrefetchBlock(idx+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1531c2916339SPierre Jolivet PetscPrefetchBlock(v+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1532c2916339SPierre Jolivet jj = idx; 1533c2916339SPierre Jolivet vv = v; 1534c2916339SPierre Jolivet for (k=0; k<cn; k++) { 1535c2916339SPierre Jolivet idx = jj; 1536c2916339SPierre Jolivet v = vv; 1537c2916339SPierre Jolivet for (j=0; j<n; j++) { 1538c2916339SPierre Jolivet xb = b + (*idx); x1 = xb[0+k*bm]; 1539c2916339SPierre Jolivet z[0+k*cm] += v[0]*x1; 15403c2e41e1SStefano Zampini if (*idx != i) c[(*idx)+k*cm] += (aconj ? PetscConj(v[0]) : v[0])*b[i+k*bm]; 1541c2916339SPierre Jolivet v += 1; 1542c2916339SPierre Jolivet ++idx; 1543c2916339SPierre Jolivet } 1544c2916339SPierre Jolivet } 1545c2916339SPierre Jolivet z += 1; 1546c2916339SPierre Jolivet } 1547c2916339SPierre Jolivet PetscFunctionReturn(0); 1548c2916339SPierre Jolivet } 1549c2916339SPierre Jolivet 1550c2916339SPierre Jolivet PetscErrorCode MatMatMult_SeqSBAIJ_2_Private(Mat A,PetscScalar* b,PetscInt bm,PetscScalar* c,PetscInt cm,PetscInt cn) 1551c2916339SPierre Jolivet { 1552c2916339SPierre Jolivet Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1553c2916339SPierre Jolivet PetscScalar *z = c; 1554c2916339SPierre Jolivet const PetscScalar *xb; 1555c2916339SPierre Jolivet PetscScalar x1,x2; 1556c2916339SPierre Jolivet const MatScalar *v = a->a,*vv; 1557c2916339SPierre Jolivet PetscInt mbs = a->mbs,i,*idx = a->j,*ii = a->i,j,*jj,n,k; 1558c2916339SPierre Jolivet 1559c2916339SPierre Jolivet PetscFunctionBegin; 1560c2916339SPierre Jolivet for (i=0; i<mbs; i++) { 1561c2916339SPierre Jolivet n = ii[1] - ii[0]; ii++; 1562c2916339SPierre Jolivet PetscPrefetchBlock(idx+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1563c2916339SPierre Jolivet PetscPrefetchBlock(v+4*n,4*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1564c2916339SPierre Jolivet jj = idx; 1565c2916339SPierre Jolivet vv = v; 1566c2916339SPierre Jolivet for (k=0; k<cn; k++) { 1567c2916339SPierre Jolivet idx = jj; 1568c2916339SPierre Jolivet v = vv; 1569c2916339SPierre Jolivet for (j=0; j<n; j++) { 1570c2916339SPierre Jolivet xb = b + 2*(*idx); x1 = xb[0+k*bm]; x2 = xb[1+k*bm]; 1571c2916339SPierre Jolivet z[0+k*cm] += v[0]*x1 + v[2]*x2; 1572c2916339SPierre Jolivet z[1+k*cm] += v[1]*x1 + v[3]*x2; 1573c2916339SPierre Jolivet if (*idx != i) { 1574c2916339SPierre Jolivet c[2*(*idx)+0+k*cm] += v[0]*b[2*i+k*bm] + v[1]*b[2*i+1+k*bm]; 1575c2916339SPierre Jolivet c[2*(*idx)+1+k*cm] += v[2]*b[2*i+k*bm] + v[3]*b[2*i+1+k*bm]; 1576c2916339SPierre Jolivet } 1577c2916339SPierre Jolivet v += 4; 1578c2916339SPierre Jolivet ++idx; 1579c2916339SPierre Jolivet } 1580c2916339SPierre Jolivet } 1581c2916339SPierre Jolivet z += 2; 1582c2916339SPierre Jolivet } 1583c2916339SPierre Jolivet PetscFunctionReturn(0); 1584c2916339SPierre Jolivet } 1585c2916339SPierre Jolivet 1586c2916339SPierre Jolivet PetscErrorCode MatMatMult_SeqSBAIJ_3_Private(Mat A,PetscScalar* b,PetscInt bm,PetscScalar* c,PetscInt cm,PetscInt cn) 1587c2916339SPierre Jolivet { 1588c2916339SPierre Jolivet Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1589c2916339SPierre Jolivet PetscScalar *z = c; 1590c2916339SPierre Jolivet const PetscScalar *xb; 1591c2916339SPierre Jolivet PetscScalar x1,x2,x3; 1592c2916339SPierre Jolivet const MatScalar *v = a->a,*vv; 1593c2916339SPierre Jolivet PetscInt mbs = a->mbs,i,*idx = a->j,*ii = a->i,j,*jj,n,k; 1594c2916339SPierre Jolivet 1595c2916339SPierre Jolivet PetscFunctionBegin; 1596c2916339SPierre Jolivet for (i=0; i<mbs; i++) { 1597c2916339SPierre Jolivet n = ii[1] - ii[0]; ii++; 1598c2916339SPierre Jolivet PetscPrefetchBlock(idx+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1599c2916339SPierre Jolivet PetscPrefetchBlock(v+9*n,9*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1600c2916339SPierre Jolivet jj = idx; 1601c2916339SPierre Jolivet vv = v; 1602c2916339SPierre Jolivet for (k=0; k<cn; k++) { 1603c2916339SPierre Jolivet idx = jj; 1604c2916339SPierre Jolivet v = vv; 1605c2916339SPierre Jolivet for (j=0; j<n; j++) { 1606c2916339SPierre Jolivet xb = b + 3*(*idx); x1 = xb[0+k*bm]; x2 = xb[1+k*bm]; x3 = xb[2+k*bm]; 1607c2916339SPierre Jolivet z[0+k*cm] += v[0]*x1 + v[3]*x2 + v[6]*x3; 1608c2916339SPierre Jolivet z[1+k*cm] += v[1]*x1 + v[4]*x2 + v[7]*x3; 1609c2916339SPierre Jolivet z[2+k*cm] += v[2]*x1 + v[5]*x2 + v[8]*x3; 1610c2916339SPierre Jolivet if (*idx != i) { 1611c2916339SPierre Jolivet c[3*(*idx)+0+k*cm] += v[0]*b[3*i+k*bm] + v[3]*b[3*i+1+k*bm] + v[6]*b[3*i+2+k*bm]; 1612c2916339SPierre Jolivet c[3*(*idx)+1+k*cm] += v[1]*b[3*i+k*bm] + v[4]*b[3*i+1+k*bm] + v[7]*b[3*i+2+k*bm]; 1613c2916339SPierre Jolivet c[3*(*idx)+2+k*cm] += v[2]*b[3*i+k*bm] + v[5]*b[3*i+1+k*bm] + v[8]*b[3*i+2+k*bm]; 1614c2916339SPierre Jolivet } 1615c2916339SPierre Jolivet v += 9; 1616c2916339SPierre Jolivet ++idx; 1617c2916339SPierre Jolivet } 1618c2916339SPierre Jolivet } 1619c2916339SPierre Jolivet z += 3; 1620c2916339SPierre Jolivet } 1621c2916339SPierre Jolivet PetscFunctionReturn(0); 1622c2916339SPierre Jolivet } 1623c2916339SPierre Jolivet 1624c2916339SPierre Jolivet PetscErrorCode MatMatMult_SeqSBAIJ_4_Private(Mat A,PetscScalar* b,PetscInt bm,PetscScalar* c,PetscInt cm,PetscInt cn) 1625c2916339SPierre Jolivet { 1626c2916339SPierre Jolivet Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1627c2916339SPierre Jolivet PetscScalar *z = c; 1628c2916339SPierre Jolivet const PetscScalar *xb; 1629c2916339SPierre Jolivet PetscScalar x1,x2,x3,x4; 1630c2916339SPierre Jolivet const MatScalar *v = a->a,*vv; 1631c2916339SPierre Jolivet PetscInt mbs = a->mbs,i,*idx = a->j,*ii = a->i,j,*jj,n,k; 1632c2916339SPierre Jolivet 1633c2916339SPierre Jolivet PetscFunctionBegin; 1634c2916339SPierre Jolivet for (i=0; i<mbs; i++) { 1635c2916339SPierre Jolivet n = ii[1] - ii[0]; ii++; 1636c2916339SPierre Jolivet PetscPrefetchBlock(idx+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1637c2916339SPierre Jolivet PetscPrefetchBlock(v+16*n,16*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1638c2916339SPierre Jolivet jj = idx; 1639c2916339SPierre Jolivet vv = v; 1640c2916339SPierre Jolivet for (k=0; k<cn; k++) { 1641c2916339SPierre Jolivet idx = jj; 1642c2916339SPierre Jolivet v = vv; 1643c2916339SPierre Jolivet for (j=0; j<n; j++) { 1644c2916339SPierre Jolivet xb = b + 4*(*idx); x1 = xb[0+k*bm]; x2 = xb[1+k*bm]; x3 = xb[2+k*bm]; x4 = xb[3+k*bm]; 1645c2916339SPierre Jolivet z[0+k*cm] += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 1646c2916339SPierre Jolivet z[1+k*cm] += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 1647c2916339SPierre Jolivet z[2+k*cm] += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 1648c2916339SPierre Jolivet z[3+k*cm] += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 1649c2916339SPierre Jolivet if (*idx != i) { 1650c2916339SPierre Jolivet c[4*(*idx)+0+k*cm] += v[0]*b[4*i+k*bm] + v[4]*b[4*i+1+k*bm] + v[8]*b[4*i+2+k*bm] + v[12]*b[4*i+3+k*bm]; 1651c2916339SPierre Jolivet c[4*(*idx)+1+k*cm] += v[1]*b[4*i+k*bm] + v[5]*b[4*i+1+k*bm] + v[9]*b[4*i+2+k*bm] + v[13]*b[4*i+3+k*bm]; 1652c2916339SPierre Jolivet c[4*(*idx)+2+k*cm] += v[2]*b[4*i+k*bm] + v[6]*b[4*i+1+k*bm] + v[10]*b[4*i+2+k*bm] + v[14]*b[4*i+3+k*bm]; 1653c2916339SPierre Jolivet c[4*(*idx)+3+k*cm] += v[3]*b[4*i+k*bm] + v[7]*b[4*i+1+k*bm] + v[11]*b[4*i+2+k*bm] + v[15]*b[4*i+3+k*bm]; 1654c2916339SPierre Jolivet } 1655c2916339SPierre Jolivet v += 16; 1656c2916339SPierre Jolivet ++idx; 1657c2916339SPierre Jolivet } 1658c2916339SPierre Jolivet } 1659c2916339SPierre Jolivet z += 4; 1660c2916339SPierre Jolivet } 1661c2916339SPierre Jolivet PetscFunctionReturn(0); 1662c2916339SPierre Jolivet } 1663c2916339SPierre Jolivet 1664c2916339SPierre Jolivet PetscErrorCode MatMatMult_SeqSBAIJ_5_Private(Mat A,PetscScalar* b,PetscInt bm,PetscScalar* c,PetscInt cm,PetscInt cn) 1665c2916339SPierre Jolivet { 1666c2916339SPierre Jolivet Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1667c2916339SPierre Jolivet PetscScalar *z = c; 1668c2916339SPierre Jolivet const PetscScalar *xb; 1669c2916339SPierre Jolivet PetscScalar x1,x2,x3,x4,x5; 1670c2916339SPierre Jolivet const MatScalar *v = a->a,*vv; 1671c2916339SPierre Jolivet PetscInt mbs = a->mbs,i,*idx = a->j,*ii = a->i,j,*jj,n,k; 1672c2916339SPierre Jolivet 1673c2916339SPierre Jolivet PetscFunctionBegin; 1674c2916339SPierre Jolivet for (i=0; i<mbs; i++) { 1675c2916339SPierre Jolivet n = ii[1] - ii[0]; ii++; 1676c2916339SPierre Jolivet PetscPrefetchBlock(idx+n,n,0,PETSC_PREFETCH_HINT_NTA); /* Indices for the next row (assumes same size as this one) */ 1677c2916339SPierre Jolivet PetscPrefetchBlock(v+25*n,25*n,0,PETSC_PREFETCH_HINT_NTA); /* Entries for the next row */ 1678c2916339SPierre Jolivet jj = idx; 1679c2916339SPierre Jolivet vv = v; 1680c2916339SPierre Jolivet for (k=0; k<cn; k++) { 1681c2916339SPierre Jolivet idx = jj; 1682c2916339SPierre Jolivet v = vv; 1683c2916339SPierre Jolivet for (j=0; j<n; j++) { 1684c2916339SPierre Jolivet xb = b + 5*(*idx); x1 = xb[0+k*bm]; x2 = xb[1+k*bm]; x3 = xb[2+k*bm]; x4 = xb[3+k*bm]; x5 = xb[4+k*cm]; 1685c2916339SPierre Jolivet z[0+k*cm] += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 1686c2916339SPierre Jolivet z[1+k*cm] += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 1687c2916339SPierre Jolivet z[2+k*cm] += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 1688c2916339SPierre Jolivet z[3+k*cm] += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 1689c2916339SPierre Jolivet z[4+k*cm] += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 1690c2916339SPierre Jolivet if (*idx != i) { 1691c2916339SPierre Jolivet c[5*(*idx)+0+k*cm] += v[0]*b[5*i+k*bm] + v[5]*b[5*i+1+k*bm] + v[10]*b[5*i+2+k*bm] + v[15]*b[5*i+3+k*bm] + v[20]*b[5*i+4+k*bm]; 1692c2916339SPierre Jolivet c[5*(*idx)+1+k*cm] += v[1]*b[5*i+k*bm] + v[6]*b[5*i+1+k*bm] + v[11]*b[5*i+2+k*bm] + v[16]*b[5*i+3+k*bm] + v[21]*b[5*i+4+k*bm]; 1693c2916339SPierre Jolivet c[5*(*idx)+2+k*cm] += v[2]*b[5*i+k*bm] + v[7]*b[5*i+1+k*bm] + v[12]*b[5*i+2+k*bm] + v[17]*b[5*i+3+k*bm] + v[22]*b[5*i+4+k*bm]; 1694c2916339SPierre Jolivet c[5*(*idx)+3+k*cm] += v[3]*b[5*i+k*bm] + v[8]*b[5*i+1+k*bm] + v[13]*b[5*i+2+k*bm] + v[18]*b[5*i+3+k*bm] + v[23]*b[5*i+4+k*bm]; 1695c2916339SPierre Jolivet c[5*(*idx)+4+k*cm] += v[4]*b[5*i+k*bm] + v[9]*b[5*i+1+k*bm] + v[14]*b[5*i+2+k*bm] + v[19]*b[5*i+3+k*bm] + v[24]*b[5*i+4+k*bm]; 1696c2916339SPierre Jolivet } 1697c2916339SPierre Jolivet v += 25; 1698c2916339SPierre Jolivet ++idx; 1699c2916339SPierre Jolivet } 1700c2916339SPierre Jolivet } 1701c2916339SPierre Jolivet z += 5; 1702c2916339SPierre Jolivet } 1703c2916339SPierre Jolivet PetscFunctionReturn(0); 1704c2916339SPierre Jolivet } 1705c2916339SPierre Jolivet 1706c2916339SPierre Jolivet PetscErrorCode MatMatMultNumeric_SeqSBAIJ_SeqDense(Mat A,Mat B,Mat C) 1707c2916339SPierre Jolivet { 1708c2916339SPierre Jolivet Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data; 1709c2916339SPierre Jolivet Mat_SeqDense *bd = (Mat_SeqDense*)B->data; 1710281439baSStefano Zampini Mat_SeqDense *cd = (Mat_SeqDense*)C->data; 1711c2916339SPierre Jolivet PetscInt cm=cd->lda,cn=B->cmap->n,bm=bd->lda; 1712c2916339SPierre Jolivet PetscInt mbs,i,bs=A->rmap->bs,j,n,bs2=a->bs2; 1713c2916339SPierre Jolivet PetscBLASInt bbs,bcn,bbm,bcm; 1714c2916339SPierre Jolivet PetscScalar *z = 0; 1715c2916339SPierre Jolivet PetscScalar *c,*b; 1716c2916339SPierre Jolivet const MatScalar *v; 1717c2916339SPierre Jolivet const PetscInt *idx,*ii; 1718c2916339SPierre Jolivet PetscScalar _DOne=1.0; 1719c2916339SPierre Jolivet PetscErrorCode ierr; 1720c2916339SPierre Jolivet 1721c2916339SPierre Jolivet PetscFunctionBegin; 1722c2916339SPierre Jolivet if (!cm || !cn) PetscFunctionReturn(0); 1723c2916339SPierre Jolivet if (B->rmap->n != A->cmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Number columns in A %D not equal rows in B %D\n",A->cmap->n,B->rmap->n); 1724c2916339SPierre Jolivet if (A->rmap->n != C->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Number rows in C %D not equal rows in A %D\n",C->rmap->n,A->rmap->n); 1725c2916339SPierre Jolivet if (B->cmap->n != C->cmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Number columns in B %D not equal columns in C %D\n",B->cmap->n,C->cmap->n); 1726c2916339SPierre Jolivet b = bd->v; 1727c2916339SPierre Jolivet ierr = MatZeroEntries(C);CHKERRQ(ierr); 1728c2916339SPierre Jolivet ierr = MatDenseGetArray(C,&c);CHKERRQ(ierr); 1729c2916339SPierre Jolivet switch (bs) { 1730c2916339SPierre Jolivet case 1: 1731c2916339SPierre Jolivet ierr = MatMatMult_SeqSBAIJ_1_Private(A, b, bm, c, cm, cn); 1732c2916339SPierre Jolivet break; 1733c2916339SPierre Jolivet case 2: 1734c2916339SPierre Jolivet ierr = MatMatMult_SeqSBAIJ_2_Private(A, b, bm, c, cm, cn); 1735c2916339SPierre Jolivet break; 1736c2916339SPierre Jolivet case 3: 1737c2916339SPierre Jolivet ierr = MatMatMult_SeqSBAIJ_3_Private(A, b, bm, c, cm, cn); 1738c2916339SPierre Jolivet break; 1739c2916339SPierre Jolivet case 4: 1740c2916339SPierre Jolivet ierr = MatMatMult_SeqSBAIJ_4_Private(A, b, bm, c, cm, cn); 1741c2916339SPierre Jolivet break; 1742c2916339SPierre Jolivet case 5: 1743c2916339SPierre Jolivet ierr = MatMatMult_SeqSBAIJ_5_Private(A, b, bm, c, cm, cn); 1744c2916339SPierre Jolivet break; 1745c2916339SPierre Jolivet default: /* block sizes larger than 5 by 5 are handled by BLAS */ 1746c2916339SPierre Jolivet ierr = PetscBLASIntCast(bs,&bbs);CHKERRQ(ierr); 1747c2916339SPierre Jolivet ierr = PetscBLASIntCast(cn,&bcn);CHKERRQ(ierr); 1748c2916339SPierre Jolivet ierr = PetscBLASIntCast(bm,&bbm);CHKERRQ(ierr); 1749c2916339SPierre Jolivet ierr = PetscBLASIntCast(cm,&bcm);CHKERRQ(ierr); 1750c2916339SPierre Jolivet idx = a->j; 1751c2916339SPierre Jolivet v = a->a; 1752c2916339SPierre Jolivet mbs = a->mbs; 1753c2916339SPierre Jolivet ii = a->i; 1754c2916339SPierre Jolivet z = c; 1755c2916339SPierre Jolivet for (i=0; i<mbs; i++) { 1756c2916339SPierre Jolivet n = ii[1] - ii[0]; ii++; 1757c2916339SPierre Jolivet for (j=0; j<n; j++) { 1758c2916339SPierre Jolivet if (*idx != i) 1759c2916339SPierre Jolivet PetscStackCallBLAS("BLASgemm",BLASgemm_("T","N",&bbs,&bcn,&bbs,&_DOne,v,&bbs,b+bs*i,&bbm,&_DOne,c+bs*(*idx),&bcm)); 1760c2916339SPierre Jolivet PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&bbs,&bcn,&bbs,&_DOne,v,&bbs,b+bs*(*idx++),&bbm,&_DOne,z,&bcm)); 1761c2916339SPierre Jolivet v += bs2; 1762c2916339SPierre Jolivet } 1763c2916339SPierre Jolivet z += bs; 1764c2916339SPierre Jolivet } 1765c2916339SPierre Jolivet } 1766c2916339SPierre Jolivet ierr = MatDenseRestoreArray(C,&c);CHKERRQ(ierr); 1767c2916339SPierre Jolivet ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1768c2916339SPierre Jolivet ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1769c2916339SPierre Jolivet ierr = PetscLogFlops((2.0*(a->nz*2.0 - a->nonzerorowcnt)*bs2 - a->nonzerorowcnt)*cn);CHKERRQ(ierr); 1770c2916339SPierre Jolivet PetscFunctionReturn(0); 1771c2916339SPierre Jolivet } 1772