149b5e25fSSatish Balay /* Using Modified Sparse Row (MSR) storage. 249b5e25fSSatish Balay See page 85, "Iterative Methods ..." by Saad. */ 349b5e25fSSatish Balay 4*2d007305SHong Zhang /*$Id: sbaijfact.c,v 1.15 2000/09/11 15:02:08 hzhang Exp hzhang $*/ 549b5e25fSSatish Balay /* 649b5e25fSSatish Balay Factorization code for SBAIJ format. 749b5e25fSSatish Balay */ 849b5e25fSSatish Balay #include "sbaij.h" 949b5e25fSSatish Balay #include "src/mat/impls/baij/seq/baij.h" 1049b5e25fSSatish Balay #include "src/vec/vecimpl.h" 1149b5e25fSSatish Balay #include "src/inline/ilu.h" 1249a6740bSHong Zhang #include "include/petscis.h" 1349b5e25fSSatish Balay 1449b5e25fSSatish Balay #undef __FUNC__ 156f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorSymbolic_SeqSBAIJ" 1677f73120SHong Zhang int MatCholeskyFactorSymbolic_SeqSBAIJ(Mat A,IS perm,PetscReal f,Mat *B) 1749b5e25fSSatish Balay { 1849b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b; 1977f73120SHong Zhang IS iperm; 20*2d007305SHong Zhang int *rip,*riip,ierr,i,mbs = a->mbs,*ai,*aj; 21066653e3SSatish Balay int *jutmp,bs = a->bs,bs2=a->bs2; 22066653e3SSatish Balay int m,nzi,realloc = 0; 23066653e3SSatish Balay int *jl,*q,jumin,jmin,jmax,juptr,nzk,qm,*iu,*ju,k,j,vj,umax,maxadd; 24cc84844dSHong Zhang /* PetscTruth *ident; */ 25*2d007305SHong Zhang PetscTruth flg_perm = PETSC_FALSE; /* non-trivial permutation */ 2649b5e25fSSatish Balay 2749b5e25fSSatish Balay PetscFunctionBegin; 2877f73120SHong Zhang PetscValidHeaderSpecific(perm,IS_COOKIE); 2977f73120SHong Zhang if (A->M != A->N) SETERRQ(PETSC_ERR_ARG_WRONG,0,"matrix must be square"); 30*2d007305SHong Zhang 31cc84844dSHong Zhang #ifdef ISIdentity 3249a6740bSHong Zhang ierr = ISIdentity(perm,ident);CHKERRQ(ierr); 3329762b5bSHong Zhang if (!*ident) { /* for a non-trivial perm, the matrix A in SBAIJ format needs to be 3449a6740bSHong Zhang re-indexed so that A(perm(i),iperm(k)) is stored in the upper 3549a6740bSHong Zhang triangle. */ 3649a6740bSHong Zhang SETERRQ(PETSC_ERR_ARG_CORRUPT,0,"Call MatReIndexingSeqSBAIJ() to re-indexing (ai,aj,a)"); 3749a6740bSHong Zhang } 38cc84844dSHong Zhang #endif 39*2d007305SHong Zhang 40*2d007305SHong Zhang if (!flg_perm){ /* no permutation */ 41*2d007305SHong Zhang ai = a->i; aj = a->j; 42*2d007305SHong Zhang } else { /* non-trivial permutation */ 43*2d007305SHong Zhang /* 44*2d007305SHong Zhang printf("2, called symbolic factor\n"); 45*2d007305SHong Zhang ierr = ISView(perm, VIEWER_STDOUT_SELF);CHKERRA(ierr); 46*2d007305SHong Zhang */ 47*2d007305SHong Zhang ierr = MatReorderingSeqSBAIJ(A, perm);CHKERRA(ierr); 48*2d007305SHong Zhang /* a = (Mat_SeqSBAIJ*)A->data; */ 49*2d007305SHong Zhang 50*2d007305SHong Zhang ai = a->inew; aj = a->jnew; 51*2d007305SHong Zhang printf("ainew= %d %d \n",a->inew[0],a->inew[mbs]); 52*2d007305SHong Zhang printf("ajnew=%d %d\n",a->jnew[0],a->jnew[a->i[mbs]-1]); 53*2d007305SHong Zhang } 54*2d007305SHong Zhang 5577f73120SHong Zhang ierr = ISInvertPermutation(perm,PETSC_DECIDE,&iperm);CHKERRQ(ierr); 5677f73120SHong Zhang ierr = ISGetIndices(perm,&rip);CHKERRQ(ierr); 5777f73120SHong Zhang ierr = ISGetIndices(iperm,&riip);CHKERRQ(ierr); 5877f73120SHong Zhang 5949b5e25fSSatish Balay /* initialization */ 6049b5e25fSSatish Balay /* Don't know how many column pointers are needed so estimate. 6149b5e25fSSatish Balay Use Modified Sparse Row storage for u and ju, see Sasd pp.85 */ 629f9cb213SHong Zhang iu = (int*)PetscMalloc((mbs+1)*sizeof(int));CHKPTRQ(iu); 6349b5e25fSSatish Balay umax = (int)(f*ai[mbs] + 1); umax += mbs + 1; 649f9cb213SHong Zhang ju = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(ju); 6549b5e25fSSatish Balay iu[0] = mbs+1; 6649b5e25fSSatish Balay juptr = mbs; 6749b5e25fSSatish Balay jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 6849b5e25fSSatish Balay q = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(q); 6949b5e25fSSatish Balay for (i=0; i<mbs; i++){ 7049b5e25fSSatish Balay jl[i] = mbs; q[i] = 0; 7149b5e25fSSatish Balay } 7249b5e25fSSatish Balay 7349b5e25fSSatish Balay /* for each row k */ 7449b5e25fSSatish Balay for (k=0; k<mbs; k++){ 7549b5e25fSSatish Balay nzk = 0; /* num. of nz blocks in k-th block row with diagonal block excluded */ 7649b5e25fSSatish Balay q[k] = mbs; 7749b5e25fSSatish Balay /* initialize nonzero structure of k-th row to row rip[k] of A */ 7849b5e25fSSatish Balay jmin = ai[rip[k]]; 7949b5e25fSSatish Balay jmax = ai[rip[k]+1]; 8049b5e25fSSatish Balay for (j=jmin; j<jmax; j++){ 8149b5e25fSSatish Balay vj = riip[aj[j]]; /* col. value */ 8249b5e25fSSatish Balay if(vj > k){ 8349b5e25fSSatish Balay qm = k; 8449b5e25fSSatish Balay do { 8549b5e25fSSatish Balay m = qm; qm = q[m]; 8649b5e25fSSatish Balay } while(qm < vj); 8749b5e25fSSatish Balay if (qm == vj) { 8849b5e25fSSatish Balay printf(" error: duplicate entry in A\n"); break; 8949b5e25fSSatish Balay } 9049b5e25fSSatish Balay nzk++; 9149b5e25fSSatish Balay q[m] = vj; 9249b5e25fSSatish Balay q[vj] = qm; 9349b5e25fSSatish Balay } /* if(vj > k) */ 9449b5e25fSSatish Balay } /* for (j=jmin; j<jmax; j++) */ 9549b5e25fSSatish Balay 9649b5e25fSSatish Balay /* modify nonzero structure of k-th row by computing fill-in 9749b5e25fSSatish Balay for each row i to be merged in */ 9849b5e25fSSatish Balay i = k; 9949b5e25fSSatish Balay i = jl[i]; /* next pivot row (== mbs for symbolic factorization) */ 10049b5e25fSSatish Balay /* printf(" next pivot row i=%d\n",i); */ 10149b5e25fSSatish Balay while (i < mbs){ 10249b5e25fSSatish Balay /* merge row i into k-th row */ 10349b5e25fSSatish Balay nzi = iu[i+1] - (iu[i]+1); 10449b5e25fSSatish Balay jmin = iu[i] + 1; jmax = iu[i] + nzi; 10549b5e25fSSatish Balay qm = k; 10649b5e25fSSatish Balay for (j=jmin; j<jmax+1; j++){ 10749b5e25fSSatish Balay vj = ju[j]; 10849b5e25fSSatish Balay do { 10949b5e25fSSatish Balay m = qm; qm = q[m]; 11049b5e25fSSatish Balay } while (qm < vj); 11149b5e25fSSatish Balay if (qm != vj){ 11249b5e25fSSatish Balay nzk++; q[m] = vj; q[vj] = qm; qm = vj; 11349b5e25fSSatish Balay } 11449b5e25fSSatish Balay } 11549b5e25fSSatish Balay i = jl[i]; /* next pivot row */ 11649b5e25fSSatish Balay } 11749b5e25fSSatish Balay 11849b5e25fSSatish Balay /* add k to row list for first nonzero element in k-th row */ 11949b5e25fSSatish Balay if (nzk > 0){ 12049b5e25fSSatish Balay i = q[k]; /* col value of first nonzero element in U(k, k+1:mbs-1) */ 12149b5e25fSSatish Balay jl[k] = jl[i]; jl[i] = k; 12249b5e25fSSatish Balay } 12349b5e25fSSatish Balay iu[k+1] = iu[k] + nzk; /* printf(" iu[%d]=%d, umax=%d\n", k+1, iu[k+1],umax);*/ 12449b5e25fSSatish Balay 12549b5e25fSSatish Balay /* allocate more space to ju if needed */ 12649b5e25fSSatish Balay if (iu[k+1] > umax) { printf("allocate more space, iu[%d]=%d > umax=%d\n",k+1, iu[k+1],umax); 12749b5e25fSSatish Balay /* estimate how much additional space we will need */ 12849b5e25fSSatish Balay /* use the strategy suggested by David Hysom <hysom@perch-t.icase.edu> */ 12949b5e25fSSatish Balay /* just double the memory each time */ 13049b5e25fSSatish Balay maxadd = umax; 13149b5e25fSSatish Balay if (maxadd < nzk) maxadd = (mbs-k)*(nzk+1)/2; 13249b5e25fSSatish Balay umax += maxadd; 13349b5e25fSSatish Balay 1349f9cb213SHong Zhang /* allocate a longer ju */ 13549b5e25fSSatish Balay jutmp = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(jutmp); 13649b5e25fSSatish Balay ierr = PetscMemcpy(jutmp,ju,iu[k]*sizeof(int));CHKERRQ(ierr); 13749b5e25fSSatish Balay ierr = PetscFree(ju);CHKERRQ(ierr); 1389f9cb213SHong Zhang ju = jutmp; 13949b5e25fSSatish Balay realloc++; /* count how many times we realloc */ 14049b5e25fSSatish Balay } 14149b5e25fSSatish Balay 14249b5e25fSSatish Balay /* save nonzero structure of k-th row in ju */ 14349b5e25fSSatish Balay i=k; 14449b5e25fSSatish Balay jumin = juptr + 1; juptr += nzk; 14549b5e25fSSatish Balay for (j=jumin; j<juptr+1; j++){ 14649b5e25fSSatish Balay i=q[i]; 14749b5e25fSSatish Balay ju[j]=i; 14849b5e25fSSatish Balay } 14977f73120SHong Zhang } 15049b5e25fSSatish Balay 15149b5e25fSSatish Balay if (ai[mbs] != 0) { 15249b5e25fSSatish Balay PetscReal af = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]); 1536f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Reallocs %d Fill ratio:given %g needed %g\n",realloc,f,af); 1546f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Run with -pc_lu_fill %g or use \n",af); 1556f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:PCLUSetFill(pc,%g);\n",af); 1566f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:for best performance.\n"); 15749b5e25fSSatish Balay } else { 1586f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Empty matrix.\n"); 15949b5e25fSSatish Balay } 16049b5e25fSSatish Balay 16177f73120SHong Zhang ierr = ISRestoreIndices(perm,&rip);CHKERRQ(ierr); 16277f73120SHong Zhang ierr = ISRestoreIndices(iperm,&riip);CHKERRQ(ierr); 16349b5e25fSSatish Balay 16449b5e25fSSatish Balay ierr = PetscFree(q);CHKERRQ(ierr); 16549b5e25fSSatish Balay ierr = PetscFree(jl);CHKERRQ(ierr); 16649b5e25fSSatish Balay 16749b5e25fSSatish Balay /* put together the new matrix */ 16849b5e25fSSatish Balay ierr = MatCreateSeqSBAIJ(A->comm,bs,bs*mbs,bs*mbs,0,PETSC_NULL,B);CHKERRQ(ierr); 16977f73120SHong Zhang PLogObjectParent(*B,iperm); 17049b5e25fSSatish Balay b = (Mat_SeqSBAIJ*)(*B)->data; 17149b5e25fSSatish Balay ierr = PetscFree(b->imax);CHKERRQ(ierr); 17249b5e25fSSatish Balay b->singlemalloc = PETSC_FALSE; 17349b5e25fSSatish Balay /* the next line frees the default space generated by the Create() */ 17449b5e25fSSatish Balay ierr = PetscFree(b->a);CHKERRQ(ierr); 17549b5e25fSSatish Balay ierr = PetscFree(b->ilen);CHKERRQ(ierr); 17649b5e25fSSatish Balay b->a = (MatScalar*)PetscMalloc((iu[mbs]+1)*sizeof(MatScalar)*bs2);CHKPTRQ(b->a); 17749b5e25fSSatish Balay b->j = ju; 17849b5e25fSSatish Balay b->i = iu; 17949b5e25fSSatish Balay b->diag = 0; 18049b5e25fSSatish Balay b->ilen = 0; 18149b5e25fSSatish Balay b->imax = 0; 18277f73120SHong Zhang b->row = perm; 18377f73120SHong Zhang ierr = PetscObjectReference((PetscObject)perm);CHKERRQ(ierr); 18477f73120SHong Zhang b->icol = iperm; 18549b5e25fSSatish Balay b->solve_work = (Scalar*)PetscMalloc((bs*mbs+bs)*sizeof(Scalar));CHKPTRQ(b->solve_work); 18649b5e25fSSatish Balay /* In b structure: Free imax, ilen, old a, old j. 18749b5e25fSSatish Balay Allocate idnew, solve_work, new a, new j */ 18849b5e25fSSatish Balay PLogObjectMemory(*B,(iu[mbs]-mbs)*(sizeof(int)+sizeof(MatScalar))); 18949b5e25fSSatish Balay b->s_maxnz = b->s_nz = iu[mbs]; 19049b5e25fSSatish Balay 19149b5e25fSSatish Balay (*B)->factor = FACTOR_LU; 19249b5e25fSSatish Balay (*B)->info.factor_mallocs = realloc; 19349b5e25fSSatish Balay (*B)->info.fill_ratio_given = f; 19449b5e25fSSatish Balay if (ai[mbs] != 0) { 19549b5e25fSSatish Balay (*B)->info.fill_ratio_needed = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]); 19649b5e25fSSatish Balay } else { 19749b5e25fSSatish Balay (*B)->info.fill_ratio_needed = 0.0; 19849b5e25fSSatish Balay } 19949b5e25fSSatish Balay 20049b5e25fSSatish Balay 20149b5e25fSSatish Balay PetscFunctionReturn(0); 20249b5e25fSSatish Balay } 20349b5e25fSSatish Balay 20449b5e25fSSatish Balay #undef __FUNC__ 2056f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_N" 2066f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_N(Mat A,Mat *B) 20749b5e25fSSatish Balay { 20849b5e25fSSatish Balay Mat C = *B; 20949b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 21049b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 21149b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 21249b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row,bslog,*ai=a->i,*aj=a->j,k,flg; 21349b5e25fSSatish Balay int *diag_offset=b->diag,diag,bs=a->bs,bs2 = a->bs2,*v_pivots,*pj; 21449b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a,*pv,*v,*rtmp,*multiplier,*v_work,*pc,*w; 21549b5e25fSSatish Balay 21649b5e25fSSatish Balay PetscFunctionBegin; 21749b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 21849b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 21949b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(bs2*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 22049b5e25fSSatish Balay ierr = PetscMemzero(rtmp,bs2*(n+1)*sizeof(MatScalar));CHKERRQ(ierr); 22149b5e25fSSatish Balay /* generate work space needed by dense LU factorization */ 22249b5e25fSSatish Balay v_work = (MatScalar*)PetscMalloc(bs*sizeof(int) + (bs+bs2)*sizeof(MatScalar));CHKPTRQ(v_work); 22349b5e25fSSatish Balay multiplier = v_work + bs; 22449b5e25fSSatish Balay v_pivots = (int*)(multiplier + bs2); 22549b5e25fSSatish Balay 22649b5e25fSSatish Balay /* flops in while loop */ 22749b5e25fSSatish Balay bslog = 2*bs*bs2; 22849b5e25fSSatish Balay 22949b5e25fSSatish Balay for (i=0; i<n; i++) { 23049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 23149b5e25fSSatish Balay ajtmp = bj + bi[i]; 23249b5e25fSSatish Balay for (j=0; j<nz; j++) { 23349b5e25fSSatish Balay ierr = PetscMemzero(rtmp+bs2*ajtmp[j],bs2*sizeof(MatScalar));CHKERRQ(ierr); 23449b5e25fSSatish Balay } 23549b5e25fSSatish Balay /* load in initial (unfactored row) */ 23649b5e25fSSatish Balay nz = ai[r[i]+1] - ai[r[i]]; 23749b5e25fSSatish Balay ajtmpold = aj + ai[r[i]]; 23849b5e25fSSatish Balay v = aa + bs2*ai[r[i]]; 23949b5e25fSSatish Balay for (j=0; j<nz; j++) { 24049b5e25fSSatish Balay ierr = PetscMemcpy(rtmp+bs2*ic[ajtmpold[j]],v+bs2*j,bs2*sizeof(MatScalar));CHKERRQ(ierr); 24149b5e25fSSatish Balay } 24249b5e25fSSatish Balay row = *ajtmp++; 24349b5e25fSSatish Balay while (row < i) { 24449b5e25fSSatish Balay pc = rtmp + bs2*row; 24549b5e25fSSatish Balay /* if (*pc) { */ 24649b5e25fSSatish Balay for (flg=0,k=0; k<bs2; k++) { if (pc[k]!=0.0) { flg =1; break; }} 24749b5e25fSSatish Balay if (flg) { 24849b5e25fSSatish Balay pv = ba + bs2*diag_offset[row]; 24949b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 25049b5e25fSSatish Balay Kernel_A_gets_A_times_B(bs,pc,pv,multiplier); 25149b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 25249b5e25fSSatish Balay pv += bs2; 25349b5e25fSSatish Balay for (j=0; j<nz; j++) { 25449b5e25fSSatish Balay Kernel_A_gets_A_minus_B_times_C(bs,rtmp+bs2*pj[j],pc,pv+bs2*j); 25549b5e25fSSatish Balay } 25649b5e25fSSatish Balay PLogFlops(bslog*(nz+1)-bs); 25749b5e25fSSatish Balay } 25849b5e25fSSatish Balay row = *ajtmp++; 25949b5e25fSSatish Balay } 26049b5e25fSSatish Balay /* finished row so stick it into b->a */ 26149b5e25fSSatish Balay pv = ba + bs2*bi[i]; 26249b5e25fSSatish Balay pj = bj + bi[i]; 26349b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 26449b5e25fSSatish Balay for (j=0; j<nz; j++) { 26549b5e25fSSatish Balay ierr = PetscMemcpy(pv+bs2*j,rtmp+bs2*pj[j],bs2*sizeof(MatScalar));CHKERRQ(ierr); 26649b5e25fSSatish Balay } 26749b5e25fSSatish Balay diag = diag_offset[i] - bi[i]; 26849b5e25fSSatish Balay /* invert diagonal block */ 26949b5e25fSSatish Balay w = pv + bs2*diag; 27049b5e25fSSatish Balay Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work); 27149b5e25fSSatish Balay } 27249b5e25fSSatish Balay 27349b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 27449b5e25fSSatish Balay ierr = PetscFree(v_work);CHKERRQ(ierr); 27549b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 27649b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 27749b5e25fSSatish Balay C->factor = FACTOR_LU; 27849b5e25fSSatish Balay C->assembled = PETSC_TRUE; 27949b5e25fSSatish Balay PLogFlops(1.3333*bs*bs2*b->mbs); /* from inverting diagonal blocks */ 28049b5e25fSSatish Balay PetscFunctionReturn(0); 28149b5e25fSSatish Balay } 282d4edadd4SHong Zhang 28349b5e25fSSatish Balay /* 28449b5e25fSSatish Balay Version for when blocks are 7 by 7 28549b5e25fSSatish Balay */ 28649b5e25fSSatish Balay #undef __FUNC__ 2876f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7" 2886f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7(Mat A,Mat *B) 28949b5e25fSSatish Balay { 29049b5e25fSSatish Balay Mat C = *B; 29149b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 29249b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 29349b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 29449b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 29549b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 29649b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 29749b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 29849b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 29949b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 30049b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 30149b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 30249b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 30349b5e25fSSatish Balay MatScalar p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49; 30449b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 30549b5e25fSSatish Balay MatScalar x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49; 30649b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 30749b5e25fSSatish Balay MatScalar m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49; 30849b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 30949b5e25fSSatish Balay 31049b5e25fSSatish Balay PetscFunctionBegin; 31149b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 31249b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 31349b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 31449b5e25fSSatish Balay 31549b5e25fSSatish Balay for (i=0; i<n; i++) { 31649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 31749b5e25fSSatish Balay ajtmp = bj + bi[i]; 31849b5e25fSSatish Balay for (j=0; j<nz; j++) { 31949b5e25fSSatish Balay x = rtmp+49*ajtmp[j]; 32049b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 32149b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 32249b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 32349b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 32449b5e25fSSatish Balay x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ; 32549b5e25fSSatish Balay x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ; 32649b5e25fSSatish Balay } 32749b5e25fSSatish Balay /* load in initial (unfactored row) */ 32849b5e25fSSatish Balay idx = r[i]; 32949b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 33049b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 33149b5e25fSSatish Balay v = aa + 49*ai[idx]; 33249b5e25fSSatish Balay for (j=0; j<nz; j++) { 33349b5e25fSSatish Balay x = rtmp+49*ic[ajtmpold[j]]; 33449b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 33549b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 33649b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 33749b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 33849b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 33949b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 34049b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 34149b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 34249b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 34349b5e25fSSatish Balay x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39]; 34449b5e25fSSatish Balay x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43]; 34549b5e25fSSatish Balay x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47]; 34649b5e25fSSatish Balay x[48] = v[48]; 34749b5e25fSSatish Balay v += 49; 34849b5e25fSSatish Balay } 34949b5e25fSSatish Balay row = *ajtmp++; 35049b5e25fSSatish Balay while (row < i) { 35149b5e25fSSatish Balay pc = rtmp + 49*row; 35249b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 35349b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 35449b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 35549b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 35649b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 35749b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 35849b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 35949b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 36049b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 36149b5e25fSSatish Balay p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39]; 36249b5e25fSSatish Balay p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43]; 36349b5e25fSSatish Balay p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47]; 36449b5e25fSSatish Balay p49 = pc[48]; 36549b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 36649b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 36749b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 36849b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 36949b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 37049b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 37149b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 37249b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 37349b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 || 37449b5e25fSSatish Balay p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 || 37549b5e25fSSatish Balay p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 || 37649b5e25fSSatish Balay p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 || 37749b5e25fSSatish Balay p49 != 0.0) { 37849b5e25fSSatish Balay pv = ba + 49*diag_offset[row]; 37949b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 38049b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 38149b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 38249b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 38349b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 38449b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 38549b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 38649b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 38749b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 38849b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 38949b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 39049b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 39149b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 39249b5e25fSSatish Balay x49 = pv[48]; 39349b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p8*x2 + p15*x3 + p22*x4 + p29*x5 + p36*x6 + p43*x7; 39449b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p9*x2 + p16*x3 + p23*x4 + p30*x5 + p37*x6 + p44*x7; 39549b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p10*x2 + p17*x3 + p24*x4 + p31*x5 + p38*x6 + p45*x7; 39649b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p11*x2 + p18*x3 + p25*x4 + p32*x5 + p39*x6 + p46*x7; 39749b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p12*x2 + p19*x3 + p26*x4 + p33*x5 + p40*x6 + p47*x7; 39849b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p13*x2 + p20*x3 + p27*x4 + p34*x5 + p41*x6 + p48*x7; 39949b5e25fSSatish Balay pc[6] = m7 = p7*x1 + p14*x2 + p21*x3 + p28*x4 + p35*x5 + p42*x6 + p49*x7; 40049b5e25fSSatish Balay 40149b5e25fSSatish Balay pc[7] = m8 = p1*x8 + p8*x9 + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14; 40249b5e25fSSatish Balay pc[8] = m9 = p2*x8 + p9*x9 + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14; 40349b5e25fSSatish Balay pc[9] = m10 = p3*x8 + p10*x9 + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14; 40449b5e25fSSatish Balay pc[10] = m11 = p4*x8 + p11*x9 + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14; 40549b5e25fSSatish Balay pc[11] = m12 = p5*x8 + p12*x9 + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14; 40649b5e25fSSatish Balay pc[12] = m13 = p6*x8 + p13*x9 + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14; 40749b5e25fSSatish Balay pc[13] = m14 = p7*x8 + p14*x9 + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14; 40849b5e25fSSatish Balay 40949b5e25fSSatish Balay pc[14] = m15 = p1*x15 + p8*x16 + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21; 41049b5e25fSSatish Balay pc[15] = m16 = p2*x15 + p9*x16 + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21; 41149b5e25fSSatish Balay pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21; 41249b5e25fSSatish Balay pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21; 41349b5e25fSSatish Balay pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21; 41449b5e25fSSatish Balay pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21; 41549b5e25fSSatish Balay pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21; 41649b5e25fSSatish Balay 41749b5e25fSSatish Balay pc[21] = m22 = p1*x22 + p8*x23 + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28; 41849b5e25fSSatish Balay pc[22] = m23 = p2*x22 + p9*x23 + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28; 41949b5e25fSSatish Balay pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28; 42049b5e25fSSatish Balay pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28; 42149b5e25fSSatish Balay pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28; 42249b5e25fSSatish Balay pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28; 42349b5e25fSSatish Balay pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28; 42449b5e25fSSatish Balay 42549b5e25fSSatish Balay pc[28] = m29 = p1*x29 + p8*x30 + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35; 42649b5e25fSSatish Balay pc[29] = m30 = p2*x29 + p9*x30 + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35; 42749b5e25fSSatish Balay pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35; 42849b5e25fSSatish Balay pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35; 42949b5e25fSSatish Balay pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35; 43049b5e25fSSatish Balay pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35; 43149b5e25fSSatish Balay pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35; 43249b5e25fSSatish Balay 43349b5e25fSSatish Balay pc[35] = m36 = p1*x36 + p8*x37 + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42; 43449b5e25fSSatish Balay pc[36] = m37 = p2*x36 + p9*x37 + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42; 43549b5e25fSSatish Balay pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42; 43649b5e25fSSatish Balay pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42; 43749b5e25fSSatish Balay pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42; 43849b5e25fSSatish Balay pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42; 43949b5e25fSSatish Balay pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42; 44049b5e25fSSatish Balay 44149b5e25fSSatish Balay pc[42] = m43 = p1*x43 + p8*x44 + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49; 44249b5e25fSSatish Balay pc[43] = m44 = p2*x43 + p9*x44 + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49; 44349b5e25fSSatish Balay pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49; 44449b5e25fSSatish Balay pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49; 44549b5e25fSSatish Balay pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49; 44649b5e25fSSatish Balay pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49; 44749b5e25fSSatish Balay pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49; 44849b5e25fSSatish Balay 44949b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 45049b5e25fSSatish Balay pv += 49; 45149b5e25fSSatish Balay for (j=0; j<nz; j++) { 45249b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 45349b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 45449b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 45549b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 45649b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 45749b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 45849b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 45949b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 46049b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 46149b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 46249b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 46349b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 46449b5e25fSSatish Balay x49 = pv[48]; 46549b5e25fSSatish Balay x = rtmp + 49*pj[j]; 46649b5e25fSSatish Balay x[0] -= m1*x1 + m8*x2 + m15*x3 + m22*x4 + m29*x5 + m36*x6 + m43*x7; 46749b5e25fSSatish Balay x[1] -= m2*x1 + m9*x2 + m16*x3 + m23*x4 + m30*x5 + m37*x6 + m44*x7; 46849b5e25fSSatish Balay x[2] -= m3*x1 + m10*x2 + m17*x3 + m24*x4 + m31*x5 + m38*x6 + m45*x7; 46949b5e25fSSatish Balay x[3] -= m4*x1 + m11*x2 + m18*x3 + m25*x4 + m32*x5 + m39*x6 + m46*x7; 47049b5e25fSSatish Balay x[4] -= m5*x1 + m12*x2 + m19*x3 + m26*x4 + m33*x5 + m40*x6 + m47*x7; 47149b5e25fSSatish Balay x[5] -= m6*x1 + m13*x2 + m20*x3 + m27*x4 + m34*x5 + m41*x6 + m48*x7; 47249b5e25fSSatish Balay x[6] -= m7*x1 + m14*x2 + m21*x3 + m28*x4 + m35*x5 + m42*x6 + m49*x7; 47349b5e25fSSatish Balay 47449b5e25fSSatish Balay x[7] -= m1*x8 + m8*x9 + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14; 47549b5e25fSSatish Balay x[8] -= m2*x8 + m9*x9 + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14; 47649b5e25fSSatish Balay x[9] -= m3*x8 + m10*x9 + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14; 47749b5e25fSSatish Balay x[10] -= m4*x8 + m11*x9 + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14; 47849b5e25fSSatish Balay x[11] -= m5*x8 + m12*x9 + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14; 47949b5e25fSSatish Balay x[12] -= m6*x8 + m13*x9 + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14; 48049b5e25fSSatish Balay x[13] -= m7*x8 + m14*x9 + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14; 48149b5e25fSSatish Balay 48249b5e25fSSatish Balay x[14] -= m1*x15 + m8*x16 + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21; 48349b5e25fSSatish Balay x[15] -= m2*x15 + m9*x16 + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21; 48449b5e25fSSatish Balay x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21; 48549b5e25fSSatish Balay x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21; 48649b5e25fSSatish Balay x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21; 48749b5e25fSSatish Balay x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21; 48849b5e25fSSatish Balay x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21; 48949b5e25fSSatish Balay 49049b5e25fSSatish Balay x[21] -= m1*x22 + m8*x23 + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28; 49149b5e25fSSatish Balay x[22] -= m2*x22 + m9*x23 + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28; 49249b5e25fSSatish Balay x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28; 49349b5e25fSSatish Balay x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28; 49449b5e25fSSatish Balay x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28; 49549b5e25fSSatish Balay x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28; 49649b5e25fSSatish Balay x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28; 49749b5e25fSSatish Balay 49849b5e25fSSatish Balay x[28] -= m1*x29 + m8*x30 + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35; 49949b5e25fSSatish Balay x[29] -= m2*x29 + m9*x30 + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35; 50049b5e25fSSatish Balay x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35; 50149b5e25fSSatish Balay x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35; 50249b5e25fSSatish Balay x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35; 50349b5e25fSSatish Balay x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35; 50449b5e25fSSatish Balay x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35; 50549b5e25fSSatish Balay 50649b5e25fSSatish Balay x[35] -= m1*x36 + m8*x37 + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42; 50749b5e25fSSatish Balay x[36] -= m2*x36 + m9*x37 + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42; 50849b5e25fSSatish Balay x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42; 50949b5e25fSSatish Balay x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42; 51049b5e25fSSatish Balay x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42; 51149b5e25fSSatish Balay x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42; 51249b5e25fSSatish Balay x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42; 51349b5e25fSSatish Balay 51449b5e25fSSatish Balay x[42] -= m1*x43 + m8*x44 + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49; 51549b5e25fSSatish Balay x[43] -= m2*x43 + m9*x44 + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49; 51649b5e25fSSatish Balay x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49; 51749b5e25fSSatish Balay x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49; 51849b5e25fSSatish Balay x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49; 51949b5e25fSSatish Balay x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49; 52049b5e25fSSatish Balay x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49; 52149b5e25fSSatish Balay pv += 49; 52249b5e25fSSatish Balay } 52349b5e25fSSatish Balay PLogFlops(686*nz+637); 52449b5e25fSSatish Balay } 52549b5e25fSSatish Balay row = *ajtmp++; 52649b5e25fSSatish Balay } 52749b5e25fSSatish Balay /* finished row so stick it into b->a */ 52849b5e25fSSatish Balay pv = ba + 49*bi[i]; 52949b5e25fSSatish Balay pj = bj + bi[i]; 53049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 53149b5e25fSSatish Balay for (j=0; j<nz; j++) { 53249b5e25fSSatish Balay x = rtmp+49*pj[j]; 53349b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 53449b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 53549b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 53649b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 53749b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 53849b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 53949b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 54049b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 54149b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 54249b5e25fSSatish Balay pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39]; 54349b5e25fSSatish Balay pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43]; 54449b5e25fSSatish Balay pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47]; 54549b5e25fSSatish Balay pv[48] = x[48]; 54649b5e25fSSatish Balay pv += 49; 54749b5e25fSSatish Balay } 54849b5e25fSSatish Balay /* invert diagonal block */ 54949b5e25fSSatish Balay w = ba + 49*diag_offset[i]; 55049b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr); 55149b5e25fSSatish Balay } 55249b5e25fSSatish Balay 55349b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 55449b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 55549b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 55649b5e25fSSatish Balay C->factor = FACTOR_LU; 55749b5e25fSSatish Balay C->assembled = PETSC_TRUE; 55849b5e25fSSatish Balay PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */ 55949b5e25fSSatish Balay PetscFunctionReturn(0); 56049b5e25fSSatish Balay } 56149b5e25fSSatish Balay 56249b5e25fSSatish Balay /* 56349b5e25fSSatish Balay Version for when blocks are 7 by 7 Using natural ordering 56449b5e25fSSatish Balay */ 56549b5e25fSSatish Balay #undef __FUNC__ 5666f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering" 5676f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering(Mat A,Mat *B) 56849b5e25fSSatish Balay { 56949b5e25fSSatish Balay Mat C = *B; 57049b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 57149b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 57249b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 57349b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 57449b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 57549b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 57649b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 57749b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 57849b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 57949b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 58049b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 58149b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 58249b5e25fSSatish Balay MatScalar p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49; 58349b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 58449b5e25fSSatish Balay MatScalar x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49; 58549b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 58649b5e25fSSatish Balay MatScalar m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49; 58749b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 58849b5e25fSSatish Balay 58949b5e25fSSatish Balay PetscFunctionBegin; 59049b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 59149b5e25fSSatish Balay for (i=0; i<n; i++) { 59249b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 59349b5e25fSSatish Balay ajtmp = bj + bi[i]; 59449b5e25fSSatish Balay for (j=0; j<nz; j++) { 59549b5e25fSSatish Balay x = rtmp+49*ajtmp[j]; 59649b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 59749b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 59849b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 59949b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 60049b5e25fSSatish Balay x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ; 60149b5e25fSSatish Balay x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ; 60249b5e25fSSatish Balay } 60349b5e25fSSatish Balay /* load in initial (unfactored row) */ 60449b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 60549b5e25fSSatish Balay ajtmpold = aj + ai[i]; 60649b5e25fSSatish Balay v = aa + 49*ai[i]; 60749b5e25fSSatish Balay for (j=0; j<nz; j++) { 60849b5e25fSSatish Balay x = rtmp+49*ajtmpold[j]; 60949b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 61049b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 61149b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 61249b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 61349b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 61449b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 61549b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 61649b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 61749b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 61849b5e25fSSatish Balay x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39]; 61949b5e25fSSatish Balay x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43]; 62049b5e25fSSatish Balay x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47]; 62149b5e25fSSatish Balay x[48] = v[48]; 62249b5e25fSSatish Balay v += 49; 62349b5e25fSSatish Balay } 62449b5e25fSSatish Balay row = *ajtmp++; 62549b5e25fSSatish Balay while (row < i) { 62649b5e25fSSatish Balay pc = rtmp + 49*row; 62749b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 62849b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 62949b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 63049b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 63149b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 63249b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 63349b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 63449b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 63549b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 63649b5e25fSSatish Balay p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39]; 63749b5e25fSSatish Balay p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43]; 63849b5e25fSSatish Balay p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47]; 63949b5e25fSSatish Balay p49 = pc[48]; 64049b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 64149b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 64249b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 64349b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 64449b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 64549b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 64649b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 64749b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 64849b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 || 64949b5e25fSSatish Balay p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 || 65049b5e25fSSatish Balay p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 || 65149b5e25fSSatish Balay p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 || 65249b5e25fSSatish Balay p49 != 0.0) { 65349b5e25fSSatish Balay pv = ba + 49*diag_offset[row]; 65449b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 65549b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 65649b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 65749b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 65849b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 65949b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 66049b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 66149b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 66249b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 66349b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 66449b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 66549b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 66649b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 66749b5e25fSSatish Balay x49 = pv[48]; 66849b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p8*x2 + p15*x3 + p22*x4 + p29*x5 + p36*x6 + p43*x7; 66949b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p9*x2 + p16*x3 + p23*x4 + p30*x5 + p37*x6 + p44*x7; 67049b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p10*x2 + p17*x3 + p24*x4 + p31*x5 + p38*x6 + p45*x7; 67149b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p11*x2 + p18*x3 + p25*x4 + p32*x5 + p39*x6 + p46*x7; 67249b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p12*x2 + p19*x3 + p26*x4 + p33*x5 + p40*x6 + p47*x7; 67349b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p13*x2 + p20*x3 + p27*x4 + p34*x5 + p41*x6 + p48*x7; 67449b5e25fSSatish Balay pc[6] = m7 = p7*x1 + p14*x2 + p21*x3 + p28*x4 + p35*x5 + p42*x6 + p49*x7; 67549b5e25fSSatish Balay 67649b5e25fSSatish Balay pc[7] = m8 = p1*x8 + p8*x9 + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14; 67749b5e25fSSatish Balay pc[8] = m9 = p2*x8 + p9*x9 + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14; 67849b5e25fSSatish Balay pc[9] = m10 = p3*x8 + p10*x9 + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14; 67949b5e25fSSatish Balay pc[10] = m11 = p4*x8 + p11*x9 + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14; 68049b5e25fSSatish Balay pc[11] = m12 = p5*x8 + p12*x9 + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14; 68149b5e25fSSatish Balay pc[12] = m13 = p6*x8 + p13*x9 + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14; 68249b5e25fSSatish Balay pc[13] = m14 = p7*x8 + p14*x9 + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14; 68349b5e25fSSatish Balay 68449b5e25fSSatish Balay pc[14] = m15 = p1*x15 + p8*x16 + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21; 68549b5e25fSSatish Balay pc[15] = m16 = p2*x15 + p9*x16 + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21; 68649b5e25fSSatish Balay pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21; 68749b5e25fSSatish Balay pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21; 68849b5e25fSSatish Balay pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21; 68949b5e25fSSatish Balay pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21; 69049b5e25fSSatish Balay pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21; 69149b5e25fSSatish Balay 69249b5e25fSSatish Balay pc[21] = m22 = p1*x22 + p8*x23 + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28; 69349b5e25fSSatish Balay pc[22] = m23 = p2*x22 + p9*x23 + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28; 69449b5e25fSSatish Balay pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28; 69549b5e25fSSatish Balay pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28; 69649b5e25fSSatish Balay pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28; 69749b5e25fSSatish Balay pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28; 69849b5e25fSSatish Balay pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28; 69949b5e25fSSatish Balay 70049b5e25fSSatish Balay pc[28] = m29 = p1*x29 + p8*x30 + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35; 70149b5e25fSSatish Balay pc[29] = m30 = p2*x29 + p9*x30 + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35; 70249b5e25fSSatish Balay pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35; 70349b5e25fSSatish Balay pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35; 70449b5e25fSSatish Balay pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35; 70549b5e25fSSatish Balay pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35; 70649b5e25fSSatish Balay pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35; 70749b5e25fSSatish Balay 70849b5e25fSSatish Balay pc[35] = m36 = p1*x36 + p8*x37 + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42; 70949b5e25fSSatish Balay pc[36] = m37 = p2*x36 + p9*x37 + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42; 71049b5e25fSSatish Balay pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42; 71149b5e25fSSatish Balay pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42; 71249b5e25fSSatish Balay pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42; 71349b5e25fSSatish Balay pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42; 71449b5e25fSSatish Balay pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42; 71549b5e25fSSatish Balay 71649b5e25fSSatish Balay pc[42] = m43 = p1*x43 + p8*x44 + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49; 71749b5e25fSSatish Balay pc[43] = m44 = p2*x43 + p9*x44 + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49; 71849b5e25fSSatish Balay pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49; 71949b5e25fSSatish Balay pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49; 72049b5e25fSSatish Balay pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49; 72149b5e25fSSatish Balay pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49; 72249b5e25fSSatish Balay pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49; 72349b5e25fSSatish Balay 72449b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 72549b5e25fSSatish Balay pv += 49; 72649b5e25fSSatish Balay for (j=0; j<nz; j++) { 72749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 72849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 72949b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 73049b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 73149b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 73249b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 73349b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 73449b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 73549b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 73649b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 73749b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 73849b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 73949b5e25fSSatish Balay x49 = pv[48]; 74049b5e25fSSatish Balay x = rtmp + 49*pj[j]; 74149b5e25fSSatish Balay x[0] -= m1*x1 + m8*x2 + m15*x3 + m22*x4 + m29*x5 + m36*x6 + m43*x7; 74249b5e25fSSatish Balay x[1] -= m2*x1 + m9*x2 + m16*x3 + m23*x4 + m30*x5 + m37*x6 + m44*x7; 74349b5e25fSSatish Balay x[2] -= m3*x1 + m10*x2 + m17*x3 + m24*x4 + m31*x5 + m38*x6 + m45*x7; 74449b5e25fSSatish Balay x[3] -= m4*x1 + m11*x2 + m18*x3 + m25*x4 + m32*x5 + m39*x6 + m46*x7; 74549b5e25fSSatish Balay x[4] -= m5*x1 + m12*x2 + m19*x3 + m26*x4 + m33*x5 + m40*x6 + m47*x7; 74649b5e25fSSatish Balay x[5] -= m6*x1 + m13*x2 + m20*x3 + m27*x4 + m34*x5 + m41*x6 + m48*x7; 74749b5e25fSSatish Balay x[6] -= m7*x1 + m14*x2 + m21*x3 + m28*x4 + m35*x5 + m42*x6 + m49*x7; 74849b5e25fSSatish Balay 74949b5e25fSSatish Balay x[7] -= m1*x8 + m8*x9 + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14; 75049b5e25fSSatish Balay x[8] -= m2*x8 + m9*x9 + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14; 75149b5e25fSSatish Balay x[9] -= m3*x8 + m10*x9 + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14; 75249b5e25fSSatish Balay x[10] -= m4*x8 + m11*x9 + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14; 75349b5e25fSSatish Balay x[11] -= m5*x8 + m12*x9 + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14; 75449b5e25fSSatish Balay x[12] -= m6*x8 + m13*x9 + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14; 75549b5e25fSSatish Balay x[13] -= m7*x8 + m14*x9 + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14; 75649b5e25fSSatish Balay 75749b5e25fSSatish Balay x[14] -= m1*x15 + m8*x16 + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21; 75849b5e25fSSatish Balay x[15] -= m2*x15 + m9*x16 + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21; 75949b5e25fSSatish Balay x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21; 76049b5e25fSSatish Balay x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21; 76149b5e25fSSatish Balay x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21; 76249b5e25fSSatish Balay x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21; 76349b5e25fSSatish Balay x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21; 76449b5e25fSSatish Balay 76549b5e25fSSatish Balay x[21] -= m1*x22 + m8*x23 + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28; 76649b5e25fSSatish Balay x[22] -= m2*x22 + m9*x23 + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28; 76749b5e25fSSatish Balay x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28; 76849b5e25fSSatish Balay x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28; 76949b5e25fSSatish Balay x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28; 77049b5e25fSSatish Balay x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28; 77149b5e25fSSatish Balay x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28; 77249b5e25fSSatish Balay 77349b5e25fSSatish Balay x[28] -= m1*x29 + m8*x30 + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35; 77449b5e25fSSatish Balay x[29] -= m2*x29 + m9*x30 + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35; 77549b5e25fSSatish Balay x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35; 77649b5e25fSSatish Balay x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35; 77749b5e25fSSatish Balay x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35; 77849b5e25fSSatish Balay x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35; 77949b5e25fSSatish Balay x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35; 78049b5e25fSSatish Balay 78149b5e25fSSatish Balay x[35] -= m1*x36 + m8*x37 + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42; 78249b5e25fSSatish Balay x[36] -= m2*x36 + m9*x37 + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42; 78349b5e25fSSatish Balay x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42; 78449b5e25fSSatish Balay x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42; 78549b5e25fSSatish Balay x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42; 78649b5e25fSSatish Balay x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42; 78749b5e25fSSatish Balay x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42; 78849b5e25fSSatish Balay 78949b5e25fSSatish Balay x[42] -= m1*x43 + m8*x44 + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49; 79049b5e25fSSatish Balay x[43] -= m2*x43 + m9*x44 + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49; 79149b5e25fSSatish Balay x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49; 79249b5e25fSSatish Balay x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49; 79349b5e25fSSatish Balay x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49; 79449b5e25fSSatish Balay x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49; 79549b5e25fSSatish Balay x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49; 79649b5e25fSSatish Balay pv += 49; 79749b5e25fSSatish Balay } 79849b5e25fSSatish Balay PLogFlops(686*nz+637); 79949b5e25fSSatish Balay } 80049b5e25fSSatish Balay row = *ajtmp++; 80149b5e25fSSatish Balay } 80249b5e25fSSatish Balay /* finished row so stick it into b->a */ 80349b5e25fSSatish Balay pv = ba + 49*bi[i]; 80449b5e25fSSatish Balay pj = bj + bi[i]; 80549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 80649b5e25fSSatish Balay for (j=0; j<nz; j++) { 80749b5e25fSSatish Balay x = rtmp+49*pj[j]; 80849b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 80949b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 81049b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 81149b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 81249b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 81349b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 81449b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 81549b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 81649b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 81749b5e25fSSatish Balay pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39]; 81849b5e25fSSatish Balay pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43]; 81949b5e25fSSatish Balay pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47]; 82049b5e25fSSatish Balay pv[48] = x[48]; 82149b5e25fSSatish Balay pv += 49; 82249b5e25fSSatish Balay } 82349b5e25fSSatish Balay /* invert diagonal block */ 82449b5e25fSSatish Balay w = ba + 49*diag_offset[i]; 82549b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr); 82649b5e25fSSatish Balay } 82749b5e25fSSatish Balay 82849b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 82949b5e25fSSatish Balay C->factor = FACTOR_LU; 83049b5e25fSSatish Balay C->assembled = PETSC_TRUE; 83149b5e25fSSatish Balay PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */ 83249b5e25fSSatish Balay PetscFunctionReturn(0); 83349b5e25fSSatish Balay } 83449b5e25fSSatish Balay 83549b5e25fSSatish Balay /* ------------------------------------------------------------*/ 83649b5e25fSSatish Balay /* 83749b5e25fSSatish Balay Version for when blocks are 6 by 6 83849b5e25fSSatish Balay */ 83949b5e25fSSatish Balay #undef __FUNC__ 8406f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6" 8416f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6(Mat A,Mat *B) 84249b5e25fSSatish Balay { 84349b5e25fSSatish Balay Mat C = *B; 84449b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 84549b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 84649b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 84749b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 84849b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 84949b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 85049b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 85149b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 85249b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 85349b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 85449b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 85549b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 85649b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 85749b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 85849b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 85949b5e25fSSatish Balay 86049b5e25fSSatish Balay PetscFunctionBegin; 86149b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 86249b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 86349b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 86449b5e25fSSatish Balay 86549b5e25fSSatish Balay for (i=0; i<n; i++) { 86649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 86749b5e25fSSatish Balay ajtmp = bj + bi[i]; 86849b5e25fSSatish Balay for (j=0; j<nz; j++) { 86949b5e25fSSatish Balay x = rtmp+36*ajtmp[j]; 87049b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 87149b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 87249b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 87349b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 87449b5e25fSSatish Balay x[34] = x[35] = 0.0 ; 87549b5e25fSSatish Balay } 87649b5e25fSSatish Balay /* load in initial (unfactored row) */ 87749b5e25fSSatish Balay idx = r[i]; 87849b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 87949b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 88049b5e25fSSatish Balay v = aa + 36*ai[idx]; 88149b5e25fSSatish Balay for (j=0; j<nz; j++) { 88249b5e25fSSatish Balay x = rtmp+36*ic[ajtmpold[j]]; 88349b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 88449b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 88549b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 88649b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 88749b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 88849b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 88949b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 89049b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 89149b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 89249b5e25fSSatish Balay v += 36; 89349b5e25fSSatish Balay } 89449b5e25fSSatish Balay row = *ajtmp++; 89549b5e25fSSatish Balay while (row < i) { 89649b5e25fSSatish Balay pc = rtmp + 36*row; 89749b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 89849b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 89949b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 90049b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 90149b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 90249b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 90349b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 90449b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 90549b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 90649b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 90749b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 90849b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 90949b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 91049b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 91149b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 91249b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 91349b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 91449b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) { 91549b5e25fSSatish Balay pv = ba + 36*diag_offset[row]; 91649b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 91749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 91849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 91949b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 92049b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 92149b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 92249b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 92349b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 92449b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 92549b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 92649b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p7*x2 + p13*x3 + p19*x4 + p25*x5 + p31*x6; 92749b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p8*x2 + p14*x3 + p20*x4 + p26*x5 + p32*x6; 92849b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p9*x2 + p15*x3 + p21*x4 + p27*x5 + p33*x6; 92949b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p10*x2 + p16*x3 + p22*x4 + p28*x5 + p34*x6; 93049b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p11*x2 + p17*x3 + p23*x4 + p29*x5 + p35*x6; 93149b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p12*x2 + p18*x3 + p24*x4 + p30*x5 + p36*x6; 93249b5e25fSSatish Balay 93349b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p7*x8 + p13*x9 + p19*x10 + p25*x11 + p31*x12; 93449b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p8*x8 + p14*x9 + p20*x10 + p26*x11 + p32*x12; 93549b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p9*x8 + p15*x9 + p21*x10 + p27*x11 + p33*x12; 93649b5e25fSSatish Balay pc[9] = m10 = p4*x7 + p10*x8 + p16*x9 + p22*x10 + p28*x11 + p34*x12; 93749b5e25fSSatish Balay pc[10] = m11 = p5*x7 + p11*x8 + p17*x9 + p23*x10 + p29*x11 + p35*x12; 93849b5e25fSSatish Balay pc[11] = m12 = p6*x7 + p12*x8 + p18*x9 + p24*x10 + p30*x11 + p36*x12; 93949b5e25fSSatish Balay 94049b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p7*x14 + p13*x15 + p19*x16 + p25*x17 + p31*x18; 94149b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p8*x14 + p14*x15 + p20*x16 + p26*x17 + p32*x18; 94249b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p9*x14 + p15*x15 + p21*x16 + p27*x17 + p33*x18; 94349b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18; 94449b5e25fSSatish Balay pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18; 94549b5e25fSSatish Balay pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18; 94649b5e25fSSatish Balay 94749b5e25fSSatish Balay pc[18] = m19 = p1*x19 + p7*x20 + p13*x21 + p19*x22 + p25*x23 + p31*x24; 94849b5e25fSSatish Balay pc[19] = m20 = p2*x19 + p8*x20 + p14*x21 + p20*x22 + p26*x23 + p32*x24; 94949b5e25fSSatish Balay pc[20] = m21 = p3*x19 + p9*x20 + p15*x21 + p21*x22 + p27*x23 + p33*x24; 95049b5e25fSSatish Balay pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24; 95149b5e25fSSatish Balay pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24; 95249b5e25fSSatish Balay pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24; 95349b5e25fSSatish Balay 95449b5e25fSSatish Balay pc[24] = m25 = p1*x25 + p7*x26 + p13*x27 + p19*x28 + p25*x29 + p31*x30; 95549b5e25fSSatish Balay pc[25] = m26 = p2*x25 + p8*x26 + p14*x27 + p20*x28 + p26*x29 + p32*x30; 95649b5e25fSSatish Balay pc[26] = m27 = p3*x25 + p9*x26 + p15*x27 + p21*x28 + p27*x29 + p33*x30; 95749b5e25fSSatish Balay pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30; 95849b5e25fSSatish Balay pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30; 95949b5e25fSSatish Balay pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30; 96049b5e25fSSatish Balay 96149b5e25fSSatish Balay pc[30] = m31 = p1*x31 + p7*x32 + p13*x33 + p19*x34 + p25*x35 + p31*x36; 96249b5e25fSSatish Balay pc[31] = m32 = p2*x31 + p8*x32 + p14*x33 + p20*x34 + p26*x35 + p32*x36; 96349b5e25fSSatish Balay pc[32] = m33 = p3*x31 + p9*x32 + p15*x33 + p21*x34 + p27*x35 + p33*x36; 96449b5e25fSSatish Balay pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36; 96549b5e25fSSatish Balay pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36; 96649b5e25fSSatish Balay pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36; 96749b5e25fSSatish Balay 96849b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 96949b5e25fSSatish Balay pv += 36; 97049b5e25fSSatish Balay for (j=0; j<nz; j++) { 97149b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 97249b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 97349b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 97449b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 97549b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 97649b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 97749b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 97849b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 97949b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 98049b5e25fSSatish Balay x = rtmp + 36*pj[j]; 98149b5e25fSSatish Balay x[0] -= m1*x1 + m7*x2 + m13*x3 + m19*x4 + m25*x5 + m31*x6; 98249b5e25fSSatish Balay x[1] -= m2*x1 + m8*x2 + m14*x3 + m20*x4 + m26*x5 + m32*x6; 98349b5e25fSSatish Balay x[2] -= m3*x1 + m9*x2 + m15*x3 + m21*x4 + m27*x5 + m33*x6; 98449b5e25fSSatish Balay x[3] -= m4*x1 + m10*x2 + m16*x3 + m22*x4 + m28*x5 + m34*x6; 98549b5e25fSSatish Balay x[4] -= m5*x1 + m11*x2 + m17*x3 + m23*x4 + m29*x5 + m35*x6; 98649b5e25fSSatish Balay x[5] -= m6*x1 + m12*x2 + m18*x3 + m24*x4 + m30*x5 + m36*x6; 98749b5e25fSSatish Balay 98849b5e25fSSatish Balay x[6] -= m1*x7 + m7*x8 + m13*x9 + m19*x10 + m25*x11 + m31*x12; 98949b5e25fSSatish Balay x[7] -= m2*x7 + m8*x8 + m14*x9 + m20*x10 + m26*x11 + m32*x12; 99049b5e25fSSatish Balay x[8] -= m3*x7 + m9*x8 + m15*x9 + m21*x10 + m27*x11 + m33*x12; 99149b5e25fSSatish Balay x[9] -= m4*x7 + m10*x8 + m16*x9 + m22*x10 + m28*x11 + m34*x12; 99249b5e25fSSatish Balay x[10] -= m5*x7 + m11*x8 + m17*x9 + m23*x10 + m29*x11 + m35*x12; 99349b5e25fSSatish Balay x[11] -= m6*x7 + m12*x8 + m18*x9 + m24*x10 + m30*x11 + m36*x12; 99449b5e25fSSatish Balay 99549b5e25fSSatish Balay x[12] -= m1*x13 + m7*x14 + m13*x15 + m19*x16 + m25*x17 + m31*x18; 99649b5e25fSSatish Balay x[13] -= m2*x13 + m8*x14 + m14*x15 + m20*x16 + m26*x17 + m32*x18; 99749b5e25fSSatish Balay x[14] -= m3*x13 + m9*x14 + m15*x15 + m21*x16 + m27*x17 + m33*x18; 99849b5e25fSSatish Balay x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18; 99949b5e25fSSatish Balay x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18; 100049b5e25fSSatish Balay x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18; 100149b5e25fSSatish Balay 100249b5e25fSSatish Balay x[18] -= m1*x19 + m7*x20 + m13*x21 + m19*x22 + m25*x23 + m31*x24; 100349b5e25fSSatish Balay x[19] -= m2*x19 + m8*x20 + m14*x21 + m20*x22 + m26*x23 + m32*x24; 100449b5e25fSSatish Balay x[20] -= m3*x19 + m9*x20 + m15*x21 + m21*x22 + m27*x23 + m33*x24; 100549b5e25fSSatish Balay x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24; 100649b5e25fSSatish Balay x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24; 100749b5e25fSSatish Balay x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24; 100849b5e25fSSatish Balay 100949b5e25fSSatish Balay x[24] -= m1*x25 + m7*x26 + m13*x27 + m19*x28 + m25*x29 + m31*x30; 101049b5e25fSSatish Balay x[25] -= m2*x25 + m8*x26 + m14*x27 + m20*x28 + m26*x29 + m32*x30; 101149b5e25fSSatish Balay x[26] -= m3*x25 + m9*x26 + m15*x27 + m21*x28 + m27*x29 + m33*x30; 101249b5e25fSSatish Balay x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30; 101349b5e25fSSatish Balay x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30; 101449b5e25fSSatish Balay x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30; 101549b5e25fSSatish Balay 101649b5e25fSSatish Balay x[30] -= m1*x31 + m7*x32 + m13*x33 + m19*x34 + m25*x35 + m31*x36; 101749b5e25fSSatish Balay x[31] -= m2*x31 + m8*x32 + m14*x33 + m20*x34 + m26*x35 + m32*x36; 101849b5e25fSSatish Balay x[32] -= m3*x31 + m9*x32 + m15*x33 + m21*x34 + m27*x35 + m33*x36; 101949b5e25fSSatish Balay x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36; 102049b5e25fSSatish Balay x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36; 102149b5e25fSSatish Balay x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36; 102249b5e25fSSatish Balay 102349b5e25fSSatish Balay pv += 36; 102449b5e25fSSatish Balay } 102549b5e25fSSatish Balay PLogFlops(432*nz+396); 102649b5e25fSSatish Balay } 102749b5e25fSSatish Balay row = *ajtmp++; 102849b5e25fSSatish Balay } 102949b5e25fSSatish Balay /* finished row so stick it into b->a */ 103049b5e25fSSatish Balay pv = ba + 36*bi[i]; 103149b5e25fSSatish Balay pj = bj + bi[i]; 103249b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 103349b5e25fSSatish Balay for (j=0; j<nz; j++) { 103449b5e25fSSatish Balay x = rtmp+36*pj[j]; 103549b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 103649b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 103749b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 103849b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 103949b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 104049b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 104149b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 104249b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 104349b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 104449b5e25fSSatish Balay pv += 36; 104549b5e25fSSatish Balay } 104649b5e25fSSatish Balay /* invert diagonal block */ 104749b5e25fSSatish Balay w = ba + 36*diag_offset[i]; 104849b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr); 104949b5e25fSSatish Balay } 105049b5e25fSSatish Balay 105149b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 105249b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 105349b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 105449b5e25fSSatish Balay C->factor = FACTOR_LU; 105549b5e25fSSatish Balay C->assembled = PETSC_TRUE; 105649b5e25fSSatish Balay PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */ 105749b5e25fSSatish Balay PetscFunctionReturn(0); 105849b5e25fSSatish Balay } 105949b5e25fSSatish Balay /* 106049b5e25fSSatish Balay Version for when blocks are 6 by 6 Using natural ordering 106149b5e25fSSatish Balay */ 106249b5e25fSSatish Balay #undef __FUNC__ 10636f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering" 10646f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering(Mat A,Mat *B) 106549b5e25fSSatish Balay { 106649b5e25fSSatish Balay Mat C = *B; 106749b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 106849b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 106949b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 107049b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 107149b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 107249b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 107349b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 107449b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 107549b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 107649b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 107749b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 107849b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 107949b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 108049b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 108149b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 108249b5e25fSSatish Balay 108349b5e25fSSatish Balay PetscFunctionBegin; 108449b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 108549b5e25fSSatish Balay for (i=0; i<n; i++) { 108649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 108749b5e25fSSatish Balay ajtmp = bj + bi[i]; 108849b5e25fSSatish Balay for (j=0; j<nz; j++) { 108949b5e25fSSatish Balay x = rtmp+36*ajtmp[j]; 109049b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 109149b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 109249b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 109349b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 109449b5e25fSSatish Balay x[34] = x[35] = 0.0 ; 109549b5e25fSSatish Balay } 109649b5e25fSSatish Balay /* load in initial (unfactored row) */ 109749b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 109849b5e25fSSatish Balay ajtmpold = aj + ai[i]; 109949b5e25fSSatish Balay v = aa + 36*ai[i]; 110049b5e25fSSatish Balay for (j=0; j<nz; j++) { 110149b5e25fSSatish Balay x = rtmp+36*ajtmpold[j]; 110249b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 110349b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 110449b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 110549b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 110649b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 110749b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 110849b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 110949b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 111049b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 111149b5e25fSSatish Balay v += 36; 111249b5e25fSSatish Balay } 111349b5e25fSSatish Balay row = *ajtmp++; 111449b5e25fSSatish Balay while (row < i) { 111549b5e25fSSatish Balay pc = rtmp + 36*row; 111649b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 111749b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 111849b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 111949b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 112049b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 112149b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 112249b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 112349b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 112449b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 112549b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 112649b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 112749b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 112849b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 112949b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 113049b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 113149b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 113249b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 113349b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) { 113449b5e25fSSatish Balay pv = ba + 36*diag_offset[row]; 113549b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 113649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 113749b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 113849b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 113949b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 114049b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 114149b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 114249b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 114349b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 114449b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 114549b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p7*x2 + p13*x3 + p19*x4 + p25*x5 + p31*x6; 114649b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p8*x2 + p14*x3 + p20*x4 + p26*x5 + p32*x6; 114749b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p9*x2 + p15*x3 + p21*x4 + p27*x5 + p33*x6; 114849b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p10*x2 + p16*x3 + p22*x4 + p28*x5 + p34*x6; 114949b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p11*x2 + p17*x3 + p23*x4 + p29*x5 + p35*x6; 115049b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p12*x2 + p18*x3 + p24*x4 + p30*x5 + p36*x6; 115149b5e25fSSatish Balay 115249b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p7*x8 + p13*x9 + p19*x10 + p25*x11 + p31*x12; 115349b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p8*x8 + p14*x9 + p20*x10 + p26*x11 + p32*x12; 115449b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p9*x8 + p15*x9 + p21*x10 + p27*x11 + p33*x12; 115549b5e25fSSatish Balay pc[9] = m10 = p4*x7 + p10*x8 + p16*x9 + p22*x10 + p28*x11 + p34*x12; 115649b5e25fSSatish Balay pc[10] = m11 = p5*x7 + p11*x8 + p17*x9 + p23*x10 + p29*x11 + p35*x12; 115749b5e25fSSatish Balay pc[11] = m12 = p6*x7 + p12*x8 + p18*x9 + p24*x10 + p30*x11 + p36*x12; 115849b5e25fSSatish Balay 115949b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p7*x14 + p13*x15 + p19*x16 + p25*x17 + p31*x18; 116049b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p8*x14 + p14*x15 + p20*x16 + p26*x17 + p32*x18; 116149b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p9*x14 + p15*x15 + p21*x16 + p27*x17 + p33*x18; 116249b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18; 116349b5e25fSSatish Balay pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18; 116449b5e25fSSatish Balay pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18; 116549b5e25fSSatish Balay 116649b5e25fSSatish Balay pc[18] = m19 = p1*x19 + p7*x20 + p13*x21 + p19*x22 + p25*x23 + p31*x24; 116749b5e25fSSatish Balay pc[19] = m20 = p2*x19 + p8*x20 + p14*x21 + p20*x22 + p26*x23 + p32*x24; 116849b5e25fSSatish Balay pc[20] = m21 = p3*x19 + p9*x20 + p15*x21 + p21*x22 + p27*x23 + p33*x24; 116949b5e25fSSatish Balay pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24; 117049b5e25fSSatish Balay pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24; 117149b5e25fSSatish Balay pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24; 117249b5e25fSSatish Balay 117349b5e25fSSatish Balay pc[24] = m25 = p1*x25 + p7*x26 + p13*x27 + p19*x28 + p25*x29 + p31*x30; 117449b5e25fSSatish Balay pc[25] = m26 = p2*x25 + p8*x26 + p14*x27 + p20*x28 + p26*x29 + p32*x30; 117549b5e25fSSatish Balay pc[26] = m27 = p3*x25 + p9*x26 + p15*x27 + p21*x28 + p27*x29 + p33*x30; 117649b5e25fSSatish Balay pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30; 117749b5e25fSSatish Balay pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30; 117849b5e25fSSatish Balay pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30; 117949b5e25fSSatish Balay 118049b5e25fSSatish Balay pc[30] = m31 = p1*x31 + p7*x32 + p13*x33 + p19*x34 + p25*x35 + p31*x36; 118149b5e25fSSatish Balay pc[31] = m32 = p2*x31 + p8*x32 + p14*x33 + p20*x34 + p26*x35 + p32*x36; 118249b5e25fSSatish Balay pc[32] = m33 = p3*x31 + p9*x32 + p15*x33 + p21*x34 + p27*x35 + p33*x36; 118349b5e25fSSatish Balay pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36; 118449b5e25fSSatish Balay pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36; 118549b5e25fSSatish Balay pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36; 118649b5e25fSSatish Balay 118749b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 118849b5e25fSSatish Balay pv += 36; 118949b5e25fSSatish Balay for (j=0; j<nz; j++) { 119049b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 119149b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 119249b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 119349b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 119449b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 119549b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 119649b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 119749b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 119849b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 119949b5e25fSSatish Balay x = rtmp + 36*pj[j]; 120049b5e25fSSatish Balay x[0] -= m1*x1 + m7*x2 + m13*x3 + m19*x4 + m25*x5 + m31*x6; 120149b5e25fSSatish Balay x[1] -= m2*x1 + m8*x2 + m14*x3 + m20*x4 + m26*x5 + m32*x6; 120249b5e25fSSatish Balay x[2] -= m3*x1 + m9*x2 + m15*x3 + m21*x4 + m27*x5 + m33*x6; 120349b5e25fSSatish Balay x[3] -= m4*x1 + m10*x2 + m16*x3 + m22*x4 + m28*x5 + m34*x6; 120449b5e25fSSatish Balay x[4] -= m5*x1 + m11*x2 + m17*x3 + m23*x4 + m29*x5 + m35*x6; 120549b5e25fSSatish Balay x[5] -= m6*x1 + m12*x2 + m18*x3 + m24*x4 + m30*x5 + m36*x6; 120649b5e25fSSatish Balay 120749b5e25fSSatish Balay x[6] -= m1*x7 + m7*x8 + m13*x9 + m19*x10 + m25*x11 + m31*x12; 120849b5e25fSSatish Balay x[7] -= m2*x7 + m8*x8 + m14*x9 + m20*x10 + m26*x11 + m32*x12; 120949b5e25fSSatish Balay x[8] -= m3*x7 + m9*x8 + m15*x9 + m21*x10 + m27*x11 + m33*x12; 121049b5e25fSSatish Balay x[9] -= m4*x7 + m10*x8 + m16*x9 + m22*x10 + m28*x11 + m34*x12; 121149b5e25fSSatish Balay x[10] -= m5*x7 + m11*x8 + m17*x9 + m23*x10 + m29*x11 + m35*x12; 121249b5e25fSSatish Balay x[11] -= m6*x7 + m12*x8 + m18*x9 + m24*x10 + m30*x11 + m36*x12; 121349b5e25fSSatish Balay 121449b5e25fSSatish Balay x[12] -= m1*x13 + m7*x14 + m13*x15 + m19*x16 + m25*x17 + m31*x18; 121549b5e25fSSatish Balay x[13] -= m2*x13 + m8*x14 + m14*x15 + m20*x16 + m26*x17 + m32*x18; 121649b5e25fSSatish Balay x[14] -= m3*x13 + m9*x14 + m15*x15 + m21*x16 + m27*x17 + m33*x18; 121749b5e25fSSatish Balay x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18; 121849b5e25fSSatish Balay x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18; 121949b5e25fSSatish Balay x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18; 122049b5e25fSSatish Balay 122149b5e25fSSatish Balay x[18] -= m1*x19 + m7*x20 + m13*x21 + m19*x22 + m25*x23 + m31*x24; 122249b5e25fSSatish Balay x[19] -= m2*x19 + m8*x20 + m14*x21 + m20*x22 + m26*x23 + m32*x24; 122349b5e25fSSatish Balay x[20] -= m3*x19 + m9*x20 + m15*x21 + m21*x22 + m27*x23 + m33*x24; 122449b5e25fSSatish Balay x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24; 122549b5e25fSSatish Balay x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24; 122649b5e25fSSatish Balay x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24; 122749b5e25fSSatish Balay 122849b5e25fSSatish Balay x[24] -= m1*x25 + m7*x26 + m13*x27 + m19*x28 + m25*x29 + m31*x30; 122949b5e25fSSatish Balay x[25] -= m2*x25 + m8*x26 + m14*x27 + m20*x28 + m26*x29 + m32*x30; 123049b5e25fSSatish Balay x[26] -= m3*x25 + m9*x26 + m15*x27 + m21*x28 + m27*x29 + m33*x30; 123149b5e25fSSatish Balay x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30; 123249b5e25fSSatish Balay x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30; 123349b5e25fSSatish Balay x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30; 123449b5e25fSSatish Balay 123549b5e25fSSatish Balay x[30] -= m1*x31 + m7*x32 + m13*x33 + m19*x34 + m25*x35 + m31*x36; 123649b5e25fSSatish Balay x[31] -= m2*x31 + m8*x32 + m14*x33 + m20*x34 + m26*x35 + m32*x36; 123749b5e25fSSatish Balay x[32] -= m3*x31 + m9*x32 + m15*x33 + m21*x34 + m27*x35 + m33*x36; 123849b5e25fSSatish Balay x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36; 123949b5e25fSSatish Balay x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36; 124049b5e25fSSatish Balay x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36; 124149b5e25fSSatish Balay 124249b5e25fSSatish Balay pv += 36; 124349b5e25fSSatish Balay } 124449b5e25fSSatish Balay PLogFlops(432*nz+396); 124549b5e25fSSatish Balay } 124649b5e25fSSatish Balay row = *ajtmp++; 124749b5e25fSSatish Balay } 124849b5e25fSSatish Balay /* finished row so stick it into b->a */ 124949b5e25fSSatish Balay pv = ba + 36*bi[i]; 125049b5e25fSSatish Balay pj = bj + bi[i]; 125149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 125249b5e25fSSatish Balay for (j=0; j<nz; j++) { 125349b5e25fSSatish Balay x = rtmp+36*pj[j]; 125449b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 125549b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 125649b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 125749b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 125849b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 125949b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 126049b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 126149b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 126249b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 126349b5e25fSSatish Balay pv += 36; 126449b5e25fSSatish Balay } 126549b5e25fSSatish Balay /* invert diagonal block */ 126649b5e25fSSatish Balay w = ba + 36*diag_offset[i]; 126749b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr); 126849b5e25fSSatish Balay } 126949b5e25fSSatish Balay 127049b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 127149b5e25fSSatish Balay C->factor = FACTOR_LU; 127249b5e25fSSatish Balay C->assembled = PETSC_TRUE; 127349b5e25fSSatish Balay PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */ 127449b5e25fSSatish Balay PetscFunctionReturn(0); 127549b5e25fSSatish Balay } 127649b5e25fSSatish Balay 127749b5e25fSSatish Balay /* 127849b5e25fSSatish Balay Version for when blocks are 5 by 5 127949b5e25fSSatish Balay */ 128049b5e25fSSatish Balay #undef __FUNC__ 12816f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5" 12826f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat A,Mat *B) 128349b5e25fSSatish Balay { 128449b5e25fSSatish Balay Mat C = *B; 128549b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 128649b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 128749b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 128849b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 128949b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 129049b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 129149b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 129249b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 129349b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 129449b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 129549b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 129649b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 129749b5e25fSSatish Balay 129849b5e25fSSatish Balay PetscFunctionBegin; 129949b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 130049b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 130149b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 130249b5e25fSSatish Balay 130349b5e25fSSatish Balay for (i=0; i<n; i++) { 130449b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 130549b5e25fSSatish Balay ajtmp = bj + bi[i]; 130649b5e25fSSatish Balay for (j=0; j<nz; j++) { 130749b5e25fSSatish Balay x = rtmp+25*ajtmp[j]; 130849b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 130949b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 131049b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0; 131149b5e25fSSatish Balay } 131249b5e25fSSatish Balay /* load in initial (unfactored row) */ 131349b5e25fSSatish Balay idx = r[i]; 131449b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 131549b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 131649b5e25fSSatish Balay v = aa + 25*ai[idx]; 131749b5e25fSSatish Balay for (j=0; j<nz; j++) { 131849b5e25fSSatish Balay x = rtmp+25*ic[ajtmpold[j]]; 131949b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 132049b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 132149b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 132249b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17]; 132349b5e25fSSatish Balay x[18] = v[18]; x[19] = v[19]; x[20] = v[20]; x[21] = v[21]; 132449b5e25fSSatish Balay x[22] = v[22]; x[23] = v[23]; x[24] = v[24]; 132549b5e25fSSatish Balay v += 25; 132649b5e25fSSatish Balay } 132749b5e25fSSatish Balay row = *ajtmp++; 132849b5e25fSSatish Balay while (row < i) { 132949b5e25fSSatish Balay pc = rtmp + 25*row; 133049b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 133149b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 133249b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 133349b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; 133449b5e25fSSatish Balay p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 133549b5e25fSSatish Balay p25 = pc[24]; 133649b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 133749b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 133849b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 133949b5e25fSSatish Balay || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || 134049b5e25fSSatish Balay p20 != 0.0 || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || 134149b5e25fSSatish Balay p24 != 0.0 || p25 != 0.0) { 134249b5e25fSSatish Balay pv = ba + 25*diag_offset[row]; 134349b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 134449b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 134549b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 134649b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 134749b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; 134849b5e25fSSatish Balay x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; 134949b5e25fSSatish Balay x23 = pv[22]; x24 = pv[23]; x25 = pv[24]; 135049b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p6*x2 + p11*x3 + p16*x4 + p21*x5; 135149b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p7*x2 + p12*x3 + p17*x4 + p22*x5; 135249b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p8*x2 + p13*x3 + p18*x4 + p23*x5; 135349b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p9*x2 + p14*x3 + p19*x4 + p24*x5; 135449b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5; 135549b5e25fSSatish Balay 135649b5e25fSSatish Balay pc[5] = m6 = p1*x6 + p6*x7 + p11*x8 + p16*x9 + p21*x10; 135749b5e25fSSatish Balay pc[6] = m7 = p2*x6 + p7*x7 + p12*x8 + p17*x9 + p22*x10; 135849b5e25fSSatish Balay pc[7] = m8 = p3*x6 + p8*x7 + p13*x8 + p18*x9 + p23*x10; 135949b5e25fSSatish Balay pc[8] = m9 = p4*x6 + p9*x7 + p14*x8 + p19*x9 + p24*x10; 136049b5e25fSSatish Balay pc[9] = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10; 136149b5e25fSSatish Balay 136249b5e25fSSatish Balay pc[10] = m11 = p1*x11 + p6*x12 + p11*x13 + p16*x14 + p21*x15; 136349b5e25fSSatish Balay pc[11] = m12 = p2*x11 + p7*x12 + p12*x13 + p17*x14 + p22*x15; 136449b5e25fSSatish Balay pc[12] = m13 = p3*x11 + p8*x12 + p13*x13 + p18*x14 + p23*x15; 136549b5e25fSSatish Balay pc[13] = m14 = p4*x11 + p9*x12 + p14*x13 + p19*x14 + p24*x15; 136649b5e25fSSatish Balay pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15; 136749b5e25fSSatish Balay 136849b5e25fSSatish Balay pc[15] = m16 = p1*x16 + p6*x17 + p11*x18 + p16*x19 + p21*x20; 136949b5e25fSSatish Balay pc[16] = m17 = p2*x16 + p7*x17 + p12*x18 + p17*x19 + p22*x20; 137049b5e25fSSatish Balay pc[17] = m18 = p3*x16 + p8*x17 + p13*x18 + p18*x19 + p23*x20; 137149b5e25fSSatish Balay pc[18] = m19 = p4*x16 + p9*x17 + p14*x18 + p19*x19 + p24*x20; 137249b5e25fSSatish Balay pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20; 137349b5e25fSSatish Balay 137449b5e25fSSatish Balay pc[20] = m21 = p1*x21 + p6*x22 + p11*x23 + p16*x24 + p21*x25; 137549b5e25fSSatish Balay pc[21] = m22 = p2*x21 + p7*x22 + p12*x23 + p17*x24 + p22*x25; 137649b5e25fSSatish Balay pc[22] = m23 = p3*x21 + p8*x22 + p13*x23 + p18*x24 + p23*x25; 137749b5e25fSSatish Balay pc[23] = m24 = p4*x21 + p9*x22 + p14*x23 + p19*x24 + p24*x25; 137849b5e25fSSatish Balay pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25; 137949b5e25fSSatish Balay 138049b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 138149b5e25fSSatish Balay pv += 25; 138249b5e25fSSatish Balay for (j=0; j<nz; j++) { 138349b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 138449b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 138549b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 138649b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; 138749b5e25fSSatish Balay x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; 138849b5e25fSSatish Balay x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; x25 = pv[24]; 138949b5e25fSSatish Balay x = rtmp + 25*pj[j]; 139049b5e25fSSatish Balay x[0] -= m1*x1 + m6*x2 + m11*x3 + m16*x4 + m21*x5; 139149b5e25fSSatish Balay x[1] -= m2*x1 + m7*x2 + m12*x3 + m17*x4 + m22*x5; 139249b5e25fSSatish Balay x[2] -= m3*x1 + m8*x2 + m13*x3 + m18*x4 + m23*x5; 139349b5e25fSSatish Balay x[3] -= m4*x1 + m9*x2 + m14*x3 + m19*x4 + m24*x5; 139449b5e25fSSatish Balay x[4] -= m5*x1 + m10*x2 + m15*x3 + m20*x4 + m25*x5; 139549b5e25fSSatish Balay 139649b5e25fSSatish Balay x[5] -= m1*x6 + m6*x7 + m11*x8 + m16*x9 + m21*x10; 139749b5e25fSSatish Balay x[6] -= m2*x6 + m7*x7 + m12*x8 + m17*x9 + m22*x10; 139849b5e25fSSatish Balay x[7] -= m3*x6 + m8*x7 + m13*x8 + m18*x9 + m23*x10; 139949b5e25fSSatish Balay x[8] -= m4*x6 + m9*x7 + m14*x8 + m19*x9 + m24*x10; 140049b5e25fSSatish Balay x[9] -= m5*x6 + m10*x7 + m15*x8 + m20*x9 + m25*x10; 140149b5e25fSSatish Balay 140249b5e25fSSatish Balay x[10] -= m1*x11 + m6*x12 + m11*x13 + m16*x14 + m21*x15; 140349b5e25fSSatish Balay x[11] -= m2*x11 + m7*x12 + m12*x13 + m17*x14 + m22*x15; 140449b5e25fSSatish Balay x[12] -= m3*x11 + m8*x12 + m13*x13 + m18*x14 + m23*x15; 140549b5e25fSSatish Balay x[13] -= m4*x11 + m9*x12 + m14*x13 + m19*x14 + m24*x15; 140649b5e25fSSatish Balay x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15; 140749b5e25fSSatish Balay 140849b5e25fSSatish Balay x[15] -= m1*x16 + m6*x17 + m11*x18 + m16*x19 + m21*x20; 140949b5e25fSSatish Balay x[16] -= m2*x16 + m7*x17 + m12*x18 + m17*x19 + m22*x20; 141049b5e25fSSatish Balay x[17] -= m3*x16 + m8*x17 + m13*x18 + m18*x19 + m23*x20; 141149b5e25fSSatish Balay x[18] -= m4*x16 + m9*x17 + m14*x18 + m19*x19 + m24*x20; 141249b5e25fSSatish Balay x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20; 141349b5e25fSSatish Balay 141449b5e25fSSatish Balay x[20] -= m1*x21 + m6*x22 + m11*x23 + m16*x24 + m21*x25; 141549b5e25fSSatish Balay x[21] -= m2*x21 + m7*x22 + m12*x23 + m17*x24 + m22*x25; 141649b5e25fSSatish Balay x[22] -= m3*x21 + m8*x22 + m13*x23 + m18*x24 + m23*x25; 141749b5e25fSSatish Balay x[23] -= m4*x21 + m9*x22 + m14*x23 + m19*x24 + m24*x25; 141849b5e25fSSatish Balay x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25; 141949b5e25fSSatish Balay 142049b5e25fSSatish Balay pv += 25; 142149b5e25fSSatish Balay } 142249b5e25fSSatish Balay PLogFlops(250*nz+225); 142349b5e25fSSatish Balay } 142449b5e25fSSatish Balay row = *ajtmp++; 142549b5e25fSSatish Balay } 142649b5e25fSSatish Balay /* finished row so stick it into b->a */ 142749b5e25fSSatish Balay pv = ba + 25*bi[i]; 142849b5e25fSSatish Balay pj = bj + bi[i]; 142949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 143049b5e25fSSatish Balay for (j=0; j<nz; j++) { 143149b5e25fSSatish Balay x = rtmp+25*pj[j]; 143249b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 143349b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 143449b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 143549b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16]; 143649b5e25fSSatish Balay pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20]; 143749b5e25fSSatish Balay pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; pv[24] = x[24]; 143849b5e25fSSatish Balay pv += 25; 143949b5e25fSSatish Balay } 144049b5e25fSSatish Balay /* invert diagonal block */ 144149b5e25fSSatish Balay w = ba + 25*diag_offset[i]; 144249b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr); 144349b5e25fSSatish Balay } 144449b5e25fSSatish Balay 144549b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 144649b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 144749b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 144849b5e25fSSatish Balay C->factor = FACTOR_LU; 144949b5e25fSSatish Balay C->assembled = PETSC_TRUE; 145049b5e25fSSatish Balay PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */ 145149b5e25fSSatish Balay PetscFunctionReturn(0); 145249b5e25fSSatish Balay } 145349b5e25fSSatish Balay /* 145449b5e25fSSatish Balay Version for when blocks are 5 by 5 Using natural ordering 145549b5e25fSSatish Balay */ 145649b5e25fSSatish Balay #undef __FUNC__ 14576f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering" 14586f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat A,Mat *B) 145949b5e25fSSatish Balay { 146049b5e25fSSatish Balay Mat C = *B; 146149b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 146249b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 146349b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 146449b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 146549b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 146649b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 146749b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 146849b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 146949b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 147049b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 147149b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 147249b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 147349b5e25fSSatish Balay 147449b5e25fSSatish Balay PetscFunctionBegin; 147549b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 147649b5e25fSSatish Balay for (i=0; i<n; i++) { 147749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 147849b5e25fSSatish Balay ajtmp = bj + bi[i]; 147949b5e25fSSatish Balay for (j=0; j<nz; j++) { 148049b5e25fSSatish Balay x = rtmp+25*ajtmp[j]; 148149b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 148249b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 148349b5e25fSSatish Balay x[16] = x[17] = x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0; 148449b5e25fSSatish Balay } 148549b5e25fSSatish Balay /* load in initial (unfactored row) */ 148649b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 148749b5e25fSSatish Balay ajtmpold = aj + ai[i]; 148849b5e25fSSatish Balay v = aa + 25*ai[i]; 148949b5e25fSSatish Balay for (j=0; j<nz; j++) { 149049b5e25fSSatish Balay x = rtmp+25*ajtmpold[j]; 149149b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 149249b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 149349b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 149449b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; 149549b5e25fSSatish Balay x[19] = v[19]; x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 149649b5e25fSSatish Balay x[24] = v[24]; 149749b5e25fSSatish Balay v += 25; 149849b5e25fSSatish Balay } 149949b5e25fSSatish Balay row = *ajtmp++; 150049b5e25fSSatish Balay while (row < i) { 150149b5e25fSSatish Balay pc = rtmp + 25*row; 150249b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 150349b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 150449b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 150549b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17]; 150649b5e25fSSatish Balay p19 = pc[18]; p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; 150749b5e25fSSatish Balay p24 = pc[23]; p25 = pc[24]; 150849b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 150949b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 151049b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 151149b5e25fSSatish Balay || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 151249b5e25fSSatish Balay || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || p25 != 0.0) { 151349b5e25fSSatish Balay pv = ba + 25*diag_offset[row]; 151449b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 151549b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 151649b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 151749b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 151849b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; 151949b5e25fSSatish Balay x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 152049b5e25fSSatish Balay x25 = pv[24]; 152149b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p6*x2 + p11*x3 + p16*x4 + p21*x5; 152249b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p7*x2 + p12*x3 + p17*x4 + p22*x5; 152349b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p8*x2 + p13*x3 + p18*x4 + p23*x5; 152449b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p9*x2 + p14*x3 + p19*x4 + p24*x5; 152549b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5; 152649b5e25fSSatish Balay 152749b5e25fSSatish Balay pc[5] = m6 = p1*x6 + p6*x7 + p11*x8 + p16*x9 + p21*x10; 152849b5e25fSSatish Balay pc[6] = m7 = p2*x6 + p7*x7 + p12*x8 + p17*x9 + p22*x10; 152949b5e25fSSatish Balay pc[7] = m8 = p3*x6 + p8*x7 + p13*x8 + p18*x9 + p23*x10; 153049b5e25fSSatish Balay pc[8] = m9 = p4*x6 + p9*x7 + p14*x8 + p19*x9 + p24*x10; 153149b5e25fSSatish Balay pc[9] = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10; 153249b5e25fSSatish Balay 153349b5e25fSSatish Balay pc[10] = m11 = p1*x11 + p6*x12 + p11*x13 + p16*x14 + p21*x15; 153449b5e25fSSatish Balay pc[11] = m12 = p2*x11 + p7*x12 + p12*x13 + p17*x14 + p22*x15; 153549b5e25fSSatish Balay pc[12] = m13 = p3*x11 + p8*x12 + p13*x13 + p18*x14 + p23*x15; 153649b5e25fSSatish Balay pc[13] = m14 = p4*x11 + p9*x12 + p14*x13 + p19*x14 + p24*x15; 153749b5e25fSSatish Balay pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15; 153849b5e25fSSatish Balay 153949b5e25fSSatish Balay pc[15] = m16 = p1*x16 + p6*x17 + p11*x18 + p16*x19 + p21*x20; 154049b5e25fSSatish Balay pc[16] = m17 = p2*x16 + p7*x17 + p12*x18 + p17*x19 + p22*x20; 154149b5e25fSSatish Balay pc[17] = m18 = p3*x16 + p8*x17 + p13*x18 + p18*x19 + p23*x20; 154249b5e25fSSatish Balay pc[18] = m19 = p4*x16 + p9*x17 + p14*x18 + p19*x19 + p24*x20; 154349b5e25fSSatish Balay pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20; 154449b5e25fSSatish Balay 154549b5e25fSSatish Balay pc[20] = m21 = p1*x21 + p6*x22 + p11*x23 + p16*x24 + p21*x25; 154649b5e25fSSatish Balay pc[21] = m22 = p2*x21 + p7*x22 + p12*x23 + p17*x24 + p22*x25; 154749b5e25fSSatish Balay pc[22] = m23 = p3*x21 + p8*x22 + p13*x23 + p18*x24 + p23*x25; 154849b5e25fSSatish Balay pc[23] = m24 = p4*x21 + p9*x22 + p14*x23 + p19*x24 + p24*x25; 154949b5e25fSSatish Balay pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25; 155049b5e25fSSatish Balay 155149b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 155249b5e25fSSatish Balay pv += 25; 155349b5e25fSSatish Balay for (j=0; j<nz; j++) { 155449b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 155549b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 155649b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 155749b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; 155849b5e25fSSatish Balay x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; 155949b5e25fSSatish Balay x24 = pv[23]; x25 = pv[24]; 156049b5e25fSSatish Balay x = rtmp + 25*pj[j]; 156149b5e25fSSatish Balay x[0] -= m1*x1 + m6*x2 + m11*x3 + m16*x4 + m21*x5; 156249b5e25fSSatish Balay x[1] -= m2*x1 + m7*x2 + m12*x3 + m17*x4 + m22*x5; 156349b5e25fSSatish Balay x[2] -= m3*x1 + m8*x2 + m13*x3 + m18*x4 + m23*x5; 156449b5e25fSSatish Balay x[3] -= m4*x1 + m9*x2 + m14*x3 + m19*x4 + m24*x5; 156549b5e25fSSatish Balay x[4] -= m5*x1 + m10*x2 + m15*x3 + m20*x4 + m25*x5; 156649b5e25fSSatish Balay 156749b5e25fSSatish Balay x[5] -= m1*x6 + m6*x7 + m11*x8 + m16*x9 + m21*x10; 156849b5e25fSSatish Balay x[6] -= m2*x6 + m7*x7 + m12*x8 + m17*x9 + m22*x10; 156949b5e25fSSatish Balay x[7] -= m3*x6 + m8*x7 + m13*x8 + m18*x9 + m23*x10; 157049b5e25fSSatish Balay x[8] -= m4*x6 + m9*x7 + m14*x8 + m19*x9 + m24*x10; 157149b5e25fSSatish Balay x[9] -= m5*x6 + m10*x7 + m15*x8 + m20*x9 + m25*x10; 157249b5e25fSSatish Balay 157349b5e25fSSatish Balay x[10] -= m1*x11 + m6*x12 + m11*x13 + m16*x14 + m21*x15; 157449b5e25fSSatish Balay x[11] -= m2*x11 + m7*x12 + m12*x13 + m17*x14 + m22*x15; 157549b5e25fSSatish Balay x[12] -= m3*x11 + m8*x12 + m13*x13 + m18*x14 + m23*x15; 157649b5e25fSSatish Balay x[13] -= m4*x11 + m9*x12 + m14*x13 + m19*x14 + m24*x15; 157749b5e25fSSatish Balay x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15; 157849b5e25fSSatish Balay 157949b5e25fSSatish Balay x[15] -= m1*x16 + m6*x17 + m11*x18 + m16*x19 + m21*x20; 158049b5e25fSSatish Balay x[16] -= m2*x16 + m7*x17 + m12*x18 + m17*x19 + m22*x20; 158149b5e25fSSatish Balay x[17] -= m3*x16 + m8*x17 + m13*x18 + m18*x19 + m23*x20; 158249b5e25fSSatish Balay x[18] -= m4*x16 + m9*x17 + m14*x18 + m19*x19 + m24*x20; 158349b5e25fSSatish Balay x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20; 158449b5e25fSSatish Balay 158549b5e25fSSatish Balay x[20] -= m1*x21 + m6*x22 + m11*x23 + m16*x24 + m21*x25; 158649b5e25fSSatish Balay x[21] -= m2*x21 + m7*x22 + m12*x23 + m17*x24 + m22*x25; 158749b5e25fSSatish Balay x[22] -= m3*x21 + m8*x22 + m13*x23 + m18*x24 + m23*x25; 158849b5e25fSSatish Balay x[23] -= m4*x21 + m9*x22 + m14*x23 + m19*x24 + m24*x25; 158949b5e25fSSatish Balay x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25; 159049b5e25fSSatish Balay pv += 25; 159149b5e25fSSatish Balay } 159249b5e25fSSatish Balay PLogFlops(250*nz+225); 159349b5e25fSSatish Balay } 159449b5e25fSSatish Balay row = *ajtmp++; 159549b5e25fSSatish Balay } 159649b5e25fSSatish Balay /* finished row so stick it into b->a */ 159749b5e25fSSatish Balay pv = ba + 25*bi[i]; 159849b5e25fSSatish Balay pj = bj + bi[i]; 159949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 160049b5e25fSSatish Balay for (j=0; j<nz; j++) { 160149b5e25fSSatish Balay x = rtmp+25*pj[j]; 160249b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 160349b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 160449b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 160549b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16]; pv[17] = x[17]; 160649b5e25fSSatish Balay pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; 160749b5e25fSSatish Balay pv[23] = x[23]; pv[24] = x[24]; 160849b5e25fSSatish Balay pv += 25; 160949b5e25fSSatish Balay } 161049b5e25fSSatish Balay /* invert diagonal block */ 161149b5e25fSSatish Balay w = ba + 25*diag_offset[i]; 161249b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr); 161349b5e25fSSatish Balay } 161449b5e25fSSatish Balay 161549b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 161649b5e25fSSatish Balay C->factor = FACTOR_LU; 161749b5e25fSSatish Balay C->assembled = PETSC_TRUE; 161849b5e25fSSatish Balay PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */ 161949b5e25fSSatish Balay PetscFunctionReturn(0); 162049b5e25fSSatish Balay } 162149b5e25fSSatish Balay 162249b5e25fSSatish Balay /* 162349b5e25fSSatish Balay Version for when blocks are 4 by 4 162449b5e25fSSatish Balay */ 162549b5e25fSSatish Balay #undef __FUNC__ 16266f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4" 16276f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat A,Mat *B) 162849b5e25fSSatish Balay { 162949b5e25fSSatish Balay Mat C = *B; 163049b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 163149b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 163249b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 163349b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 163449b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 163549b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 163649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 163749b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 163849b5e25fSSatish Balay MatScalar p10,p11,p12,p13,p14,p15,p16,m10,m11,m12; 163949b5e25fSSatish Balay MatScalar m13,m14,m15,m16; 164049b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 164149b5e25fSSatish Balay 164249b5e25fSSatish Balay PetscFunctionBegin; 164349b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 164449b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 164549b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(16*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 164649b5e25fSSatish Balay 164749b5e25fSSatish Balay for (i=0; i<n; i++) { 164849b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 164949b5e25fSSatish Balay ajtmp = bj + bi[i]; 165049b5e25fSSatish Balay for (j=0; j<nz; j++) { 165149b5e25fSSatish Balay x = rtmp+16*ajtmp[j]; 165249b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 165349b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 165449b5e25fSSatish Balay } 165549b5e25fSSatish Balay /* load in initial (unfactored row) */ 165649b5e25fSSatish Balay idx = r[i]; 165749b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 165849b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 165949b5e25fSSatish Balay v = aa + 16*ai[idx]; 166049b5e25fSSatish Balay for (j=0; j<nz; j++) { 166149b5e25fSSatish Balay x = rtmp+16*ic[ajtmpold[j]]; 166249b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 166349b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 166449b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 166549b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; 166649b5e25fSSatish Balay v += 16; 166749b5e25fSSatish Balay } 166849b5e25fSSatish Balay row = *ajtmp++; 166949b5e25fSSatish Balay while (row < i) { 167049b5e25fSSatish Balay pc = rtmp + 16*row; 167149b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 167249b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 167349b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 167449b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; 167549b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 167649b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 167749b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 167849b5e25fSSatish Balay || p16 != 0.0) { 167949b5e25fSSatish Balay pv = ba + 16*diag_offset[row]; 168049b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 168149b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 168249b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 168349b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 168449b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; 168549b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p5*x2 + p9*x3 + p13*x4; 168649b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p6*x2 + p10*x3 + p14*x4; 168749b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p7*x2 + p11*x3 + p15*x4; 168849b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p8*x2 + p12*x3 + p16*x4; 168949b5e25fSSatish Balay 169049b5e25fSSatish Balay pc[4] = m5 = p1*x5 + p5*x6 + p9*x7 + p13*x8; 169149b5e25fSSatish Balay pc[5] = m6 = p2*x5 + p6*x6 + p10*x7 + p14*x8; 169249b5e25fSSatish Balay pc[6] = m7 = p3*x5 + p7*x6 + p11*x7 + p15*x8; 169349b5e25fSSatish Balay pc[7] = m8 = p4*x5 + p8*x6 + p12*x7 + p16*x8; 169449b5e25fSSatish Balay 169549b5e25fSSatish Balay pc[8] = m9 = p1*x9 + p5*x10 + p9*x11 + p13*x12; 169649b5e25fSSatish Balay pc[9] = m10 = p2*x9 + p6*x10 + p10*x11 + p14*x12; 169749b5e25fSSatish Balay pc[10] = m11 = p3*x9 + p7*x10 + p11*x11 + p15*x12; 169849b5e25fSSatish Balay pc[11] = m12 = p4*x9 + p8*x10 + p12*x11 + p16*x12; 169949b5e25fSSatish Balay 170049b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p5*x14 + p9*x15 + p13*x16; 170149b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p6*x14 + p10*x15 + p14*x16; 170249b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p7*x14 + p11*x15 + p15*x16; 170349b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p8*x14 + p12*x15 + p16*x16; 170449b5e25fSSatish Balay 170549b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 170649b5e25fSSatish Balay pv += 16; 170749b5e25fSSatish Balay for (j=0; j<nz; j++) { 170849b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 170949b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 171049b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 171149b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 171249b5e25fSSatish Balay x = rtmp + 16*pj[j]; 171349b5e25fSSatish Balay x[0] -= m1*x1 + m5*x2 + m9*x3 + m13*x4; 171449b5e25fSSatish Balay x[1] -= m2*x1 + m6*x2 + m10*x3 + m14*x4; 171549b5e25fSSatish Balay x[2] -= m3*x1 + m7*x2 + m11*x3 + m15*x4; 171649b5e25fSSatish Balay x[3] -= m4*x1 + m8*x2 + m12*x3 + m16*x4; 171749b5e25fSSatish Balay 171849b5e25fSSatish Balay x[4] -= m1*x5 + m5*x6 + m9*x7 + m13*x8; 171949b5e25fSSatish Balay x[5] -= m2*x5 + m6*x6 + m10*x7 + m14*x8; 172049b5e25fSSatish Balay x[6] -= m3*x5 + m7*x6 + m11*x7 + m15*x8; 172149b5e25fSSatish Balay x[7] -= m4*x5 + m8*x6 + m12*x7 + m16*x8; 172249b5e25fSSatish Balay 172349b5e25fSSatish Balay x[8] -= m1*x9 + m5*x10 + m9*x11 + m13*x12; 172449b5e25fSSatish Balay x[9] -= m2*x9 + m6*x10 + m10*x11 + m14*x12; 172549b5e25fSSatish Balay x[10] -= m3*x9 + m7*x10 + m11*x11 + m15*x12; 172649b5e25fSSatish Balay x[11] -= m4*x9 + m8*x10 + m12*x11 + m16*x12; 172749b5e25fSSatish Balay 172849b5e25fSSatish Balay x[12] -= m1*x13 + m5*x14 + m9*x15 + m13*x16; 172949b5e25fSSatish Balay x[13] -= m2*x13 + m6*x14 + m10*x15 + m14*x16; 173049b5e25fSSatish Balay x[14] -= m3*x13 + m7*x14 + m11*x15 + m15*x16; 173149b5e25fSSatish Balay x[15] -= m4*x13 + m8*x14 + m12*x15 + m16*x16; 173249b5e25fSSatish Balay 173349b5e25fSSatish Balay pv += 16; 173449b5e25fSSatish Balay } 173549b5e25fSSatish Balay PLogFlops(128*nz+112); 173649b5e25fSSatish Balay } 173749b5e25fSSatish Balay row = *ajtmp++; 173849b5e25fSSatish Balay } 173949b5e25fSSatish Balay /* finished row so stick it into b->a */ 174049b5e25fSSatish Balay pv = ba + 16*bi[i]; 174149b5e25fSSatish Balay pj = bj + bi[i]; 174249b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 174349b5e25fSSatish Balay for (j=0; j<nz; j++) { 174449b5e25fSSatish Balay x = rtmp+16*pj[j]; 174549b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 174649b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 174749b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 174849b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 174949b5e25fSSatish Balay pv += 16; 175049b5e25fSSatish Balay } 175149b5e25fSSatish Balay /* invert diagonal block */ 175249b5e25fSSatish Balay w = ba + 16*diag_offset[i]; 175349b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_4(w);CHKERRQ(ierr); 175449b5e25fSSatish Balay } 175549b5e25fSSatish Balay 175649b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 175749b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 175849b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 175949b5e25fSSatish Balay C->factor = FACTOR_LU; 176049b5e25fSSatish Balay C->assembled = PETSC_TRUE; 176149b5e25fSSatish Balay PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */ 176249b5e25fSSatish Balay PetscFunctionReturn(0); 176349b5e25fSSatish Balay } 176449b5e25fSSatish Balay /* 176549b5e25fSSatish Balay Version for when blocks are 4 by 4 Using natural ordering 176649b5e25fSSatish Balay */ 176749b5e25fSSatish Balay #undef __FUNC__ 17686f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering" 17696f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering(Mat A,Mat *B) 177049b5e25fSSatish Balay { 177149b5e25fSSatish Balay Mat C = *B; 177249b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 177349b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 177449b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 177549b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 177649b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 177749b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 177849b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 177949b5e25fSSatish Balay MatScalar p10,p11,p12,p13,p14,p15,p16,m10,m11,m12; 178049b5e25fSSatish Balay MatScalar m13,m14,m15,m16; 178149b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 178249b5e25fSSatish Balay 178349b5e25fSSatish Balay PetscFunctionBegin; 178449b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(16*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 178549b5e25fSSatish Balay 178649b5e25fSSatish Balay for (i=0; i<n; i++) { 178749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 178849b5e25fSSatish Balay ajtmp = bj + bi[i]; 178949b5e25fSSatish Balay for (j=0; j<nz; j++) { 179049b5e25fSSatish Balay x = rtmp+16*ajtmp[j]; 179149b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 179249b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 179349b5e25fSSatish Balay } 179449b5e25fSSatish Balay /* load in initial (unfactored row) */ 179549b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 179649b5e25fSSatish Balay ajtmpold = aj + ai[i]; 179749b5e25fSSatish Balay v = aa + 16*ai[i]; 179849b5e25fSSatish Balay for (j=0; j<nz; j++) { 179949b5e25fSSatish Balay x = rtmp+16*ajtmpold[j]; 180049b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 180149b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 180249b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 180349b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; 180449b5e25fSSatish Balay v += 16; 180549b5e25fSSatish Balay } 180649b5e25fSSatish Balay row = *ajtmp++; 180749b5e25fSSatish Balay while (row < i) { 180849b5e25fSSatish Balay pc = rtmp + 16*row; 180949b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 181049b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 181149b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 181249b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; 181349b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 181449b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 181549b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 181649b5e25fSSatish Balay || p16 != 0.0) { 181749b5e25fSSatish Balay pv = ba + 16*diag_offset[row]; 181849b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 181949b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 182049b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 182149b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 182249b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; 182349b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p5*x2 + p9*x3 + p13*x4; 182449b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p6*x2 + p10*x3 + p14*x4; 182549b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p7*x2 + p11*x3 + p15*x4; 182649b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p8*x2 + p12*x3 + p16*x4; 182749b5e25fSSatish Balay 182849b5e25fSSatish Balay pc[4] = m5 = p1*x5 + p5*x6 + p9*x7 + p13*x8; 182949b5e25fSSatish Balay pc[5] = m6 = p2*x5 + p6*x6 + p10*x7 + p14*x8; 183049b5e25fSSatish Balay pc[6] = m7 = p3*x5 + p7*x6 + p11*x7 + p15*x8; 183149b5e25fSSatish Balay pc[7] = m8 = p4*x5 + p8*x6 + p12*x7 + p16*x8; 183249b5e25fSSatish Balay 183349b5e25fSSatish Balay pc[8] = m9 = p1*x9 + p5*x10 + p9*x11 + p13*x12; 183449b5e25fSSatish Balay pc[9] = m10 = p2*x9 + p6*x10 + p10*x11 + p14*x12; 183549b5e25fSSatish Balay pc[10] = m11 = p3*x9 + p7*x10 + p11*x11 + p15*x12; 183649b5e25fSSatish Balay pc[11] = m12 = p4*x9 + p8*x10 + p12*x11 + p16*x12; 183749b5e25fSSatish Balay 183849b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p5*x14 + p9*x15 + p13*x16; 183949b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p6*x14 + p10*x15 + p14*x16; 184049b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p7*x14 + p11*x15 + p15*x16; 184149b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p8*x14 + p12*x15 + p16*x16; 184249b5e25fSSatish Balay 184349b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 184449b5e25fSSatish Balay pv += 16; 184549b5e25fSSatish Balay for (j=0; j<nz; j++) { 184649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 184749b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 184849b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 184949b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 185049b5e25fSSatish Balay x = rtmp + 16*pj[j]; 185149b5e25fSSatish Balay x[0] -= m1*x1 + m5*x2 + m9*x3 + m13*x4; 185249b5e25fSSatish Balay x[1] -= m2*x1 + m6*x2 + m10*x3 + m14*x4; 185349b5e25fSSatish Balay x[2] -= m3*x1 + m7*x2 + m11*x3 + m15*x4; 185449b5e25fSSatish Balay x[3] -= m4*x1 + m8*x2 + m12*x3 + m16*x4; 185549b5e25fSSatish Balay 185649b5e25fSSatish Balay x[4] -= m1*x5 + m5*x6 + m9*x7 + m13*x8; 185749b5e25fSSatish Balay x[5] -= m2*x5 + m6*x6 + m10*x7 + m14*x8; 185849b5e25fSSatish Balay x[6] -= m3*x5 + m7*x6 + m11*x7 + m15*x8; 185949b5e25fSSatish Balay x[7] -= m4*x5 + m8*x6 + m12*x7 + m16*x8; 186049b5e25fSSatish Balay 186149b5e25fSSatish Balay x[8] -= m1*x9 + m5*x10 + m9*x11 + m13*x12; 186249b5e25fSSatish Balay x[9] -= m2*x9 + m6*x10 + m10*x11 + m14*x12; 186349b5e25fSSatish Balay x[10] -= m3*x9 + m7*x10 + m11*x11 + m15*x12; 186449b5e25fSSatish Balay x[11] -= m4*x9 + m8*x10 + m12*x11 + m16*x12; 186549b5e25fSSatish Balay 186649b5e25fSSatish Balay x[12] -= m1*x13 + m5*x14 + m9*x15 + m13*x16; 186749b5e25fSSatish Balay x[13] -= m2*x13 + m6*x14 + m10*x15 + m14*x16; 186849b5e25fSSatish Balay x[14] -= m3*x13 + m7*x14 + m11*x15 + m15*x16; 186949b5e25fSSatish Balay x[15] -= m4*x13 + m8*x14 + m12*x15 + m16*x16; 187049b5e25fSSatish Balay 187149b5e25fSSatish Balay pv += 16; 187249b5e25fSSatish Balay } 187349b5e25fSSatish Balay PLogFlops(128*nz+112); 187449b5e25fSSatish Balay } 187549b5e25fSSatish Balay row = *ajtmp++; 187649b5e25fSSatish Balay } 187749b5e25fSSatish Balay /* finished row so stick it into b->a */ 187849b5e25fSSatish Balay pv = ba + 16*bi[i]; 187949b5e25fSSatish Balay pj = bj + bi[i]; 188049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 188149b5e25fSSatish Balay for (j=0; j<nz; j++) { 188249b5e25fSSatish Balay x = rtmp+16*pj[j]; 188349b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 188449b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 188549b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 188649b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 188749b5e25fSSatish Balay pv += 16; 188849b5e25fSSatish Balay } 188949b5e25fSSatish Balay /* invert diagonal block */ 189049b5e25fSSatish Balay w = ba + 16*diag_offset[i]; 189149b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_4(w);CHKERRQ(ierr); 189249b5e25fSSatish Balay } 189349b5e25fSSatish Balay 189449b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 189549b5e25fSSatish Balay C->factor = FACTOR_LU; 189649b5e25fSSatish Balay C->assembled = PETSC_TRUE; 189749b5e25fSSatish Balay PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */ 189849b5e25fSSatish Balay PetscFunctionReturn(0); 189949b5e25fSSatish Balay } 190049b5e25fSSatish Balay 190149b5e25fSSatish Balay /* 190249b5e25fSSatish Balay Version for when blocks are 3 by 3 190349b5e25fSSatish Balay */ 190449b5e25fSSatish Balay #undef __FUNC__ 19056f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3" 19066f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3(Mat A,Mat *B) 190749b5e25fSSatish Balay { 190849b5e25fSSatish Balay Mat C = *B; 190949b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 191049b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 191149b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 191249b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row,*ai=a->i,*aj=a->j; 191349b5e25fSSatish Balay int *diag_offset = b->diag,idx,*pj; 191449b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 191549b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 191649b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9; 191749b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 191849b5e25fSSatish Balay 191949b5e25fSSatish Balay PetscFunctionBegin; 192049b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 192149b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 192249b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(9*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 192349b5e25fSSatish Balay 192449b5e25fSSatish Balay for (i=0; i<n; i++) { 192549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 192649b5e25fSSatish Balay ajtmp = bj + bi[i]; 192749b5e25fSSatish Balay for (j=0; j<nz; j++) { 192849b5e25fSSatish Balay x = rtmp + 9*ajtmp[j]; 192949b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = 0.0; 193049b5e25fSSatish Balay } 193149b5e25fSSatish Balay /* load in initial (unfactored row) */ 193249b5e25fSSatish Balay idx = r[i]; 193349b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 193449b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 193549b5e25fSSatish Balay v = aa + 9*ai[idx]; 193649b5e25fSSatish Balay for (j=0; j<nz; j++) { 193749b5e25fSSatish Balay x = rtmp + 9*ic[ajtmpold[j]]; 193849b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 193949b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 194049b5e25fSSatish Balay v += 9; 194149b5e25fSSatish Balay } 194249b5e25fSSatish Balay row = *ajtmp++; 194349b5e25fSSatish Balay while (row < i) { 194449b5e25fSSatish Balay pc = rtmp + 9*row; 194549b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 194649b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 194749b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 194849b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0) { 194949b5e25fSSatish Balay pv = ba + 9*diag_offset[row]; 195049b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 195149b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 195249b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 195349b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p4*x2 + p7*x3; 195449b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p5*x2 + p8*x3; 195549b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p6*x2 + p9*x3; 195649b5e25fSSatish Balay 195749b5e25fSSatish Balay pc[3] = m4 = p1*x4 + p4*x5 + p7*x6; 195849b5e25fSSatish Balay pc[4] = m5 = p2*x4 + p5*x5 + p8*x6; 195949b5e25fSSatish Balay pc[5] = m6 = p3*x4 + p6*x5 + p9*x6; 196049b5e25fSSatish Balay 196149b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p4*x8 + p7*x9; 196249b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p5*x8 + p8*x9; 196349b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p6*x8 + p9*x9; 196449b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 196549b5e25fSSatish Balay pv += 9; 196649b5e25fSSatish Balay for (j=0; j<nz; j++) { 196749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 196849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 196949b5e25fSSatish Balay x = rtmp + 9*pj[j]; 197049b5e25fSSatish Balay x[0] -= m1*x1 + m4*x2 + m7*x3; 197149b5e25fSSatish Balay x[1] -= m2*x1 + m5*x2 + m8*x3; 197249b5e25fSSatish Balay x[2] -= m3*x1 + m6*x2 + m9*x3; 197349b5e25fSSatish Balay 197449b5e25fSSatish Balay x[3] -= m1*x4 + m4*x5 + m7*x6; 197549b5e25fSSatish Balay x[4] -= m2*x4 + m5*x5 + m8*x6; 197649b5e25fSSatish Balay x[5] -= m3*x4 + m6*x5 + m9*x6; 197749b5e25fSSatish Balay 197849b5e25fSSatish Balay x[6] -= m1*x7 + m4*x8 + m7*x9; 197949b5e25fSSatish Balay x[7] -= m2*x7 + m5*x8 + m8*x9; 198049b5e25fSSatish Balay x[8] -= m3*x7 + m6*x8 + m9*x9; 198149b5e25fSSatish Balay pv += 9; 198249b5e25fSSatish Balay } 198349b5e25fSSatish Balay PLogFlops(54*nz+36); 198449b5e25fSSatish Balay } 198549b5e25fSSatish Balay row = *ajtmp++; 198649b5e25fSSatish Balay } 198749b5e25fSSatish Balay /* finished row so stick it into b->a */ 198849b5e25fSSatish Balay pv = ba + 9*bi[i]; 198949b5e25fSSatish Balay pj = bj + bi[i]; 199049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 199149b5e25fSSatish Balay for (j=0; j<nz; j++) { 199249b5e25fSSatish Balay x = rtmp + 9*pj[j]; 199349b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 199449b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 199549b5e25fSSatish Balay pv += 9; 199649b5e25fSSatish Balay } 199749b5e25fSSatish Balay /* invert diagonal block */ 199849b5e25fSSatish Balay w = ba + 9*diag_offset[i]; 199949b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_3(w);CHKERRQ(ierr); 200049b5e25fSSatish Balay } 200149b5e25fSSatish Balay 200249b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 200349b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 200449b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 200549b5e25fSSatish Balay C->factor = FACTOR_LU; 200649b5e25fSSatish Balay C->assembled = PETSC_TRUE; 200749b5e25fSSatish Balay PLogFlops(1.3333*27*b->mbs); /* from inverting diagonal blocks */ 200849b5e25fSSatish Balay PetscFunctionReturn(0); 200949b5e25fSSatish Balay } 201049b5e25fSSatish Balay /* 201149b5e25fSSatish Balay Version for when blocks are 3 by 3 Using natural ordering 201249b5e25fSSatish Balay */ 201349b5e25fSSatish Balay #undef __FUNC__ 20146f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering" 20156f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering(Mat A,Mat *B) 201649b5e25fSSatish Balay { 201749b5e25fSSatish Balay Mat C = *B; 201849b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 201949b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 202049b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 202149b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 202249b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 202349b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 202449b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9; 202549b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 202649b5e25fSSatish Balay 202749b5e25fSSatish Balay PetscFunctionBegin; 202849b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(9*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 202949b5e25fSSatish Balay 203049b5e25fSSatish Balay for (i=0; i<n; i++) { 203149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 203249b5e25fSSatish Balay ajtmp = bj + bi[i]; 203349b5e25fSSatish Balay for (j=0; j<nz; j++) { 203449b5e25fSSatish Balay x = rtmp+9*ajtmp[j]; 203549b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = 0.0; 203649b5e25fSSatish Balay } 203749b5e25fSSatish Balay /* load in initial (unfactored row) */ 203849b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 203949b5e25fSSatish Balay ajtmpold = aj + ai[i]; 204049b5e25fSSatish Balay v = aa + 9*ai[i]; 204149b5e25fSSatish Balay for (j=0; j<nz; j++) { 204249b5e25fSSatish Balay x = rtmp+9*ajtmpold[j]; 204349b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 204449b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 204549b5e25fSSatish Balay v += 9; 204649b5e25fSSatish Balay } 204749b5e25fSSatish Balay row = *ajtmp++; 204849b5e25fSSatish Balay while (row < i) { 204949b5e25fSSatish Balay pc = rtmp + 9*row; 205049b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 205149b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 205249b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 205349b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0) { 205449b5e25fSSatish Balay pv = ba + 9*diag_offset[row]; 205549b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 205649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 205749b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 205849b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p4*x2 + p7*x3; 205949b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p5*x2 + p8*x3; 206049b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p6*x2 + p9*x3; 206149b5e25fSSatish Balay 206249b5e25fSSatish Balay pc[3] = m4 = p1*x4 + p4*x5 + p7*x6; 206349b5e25fSSatish Balay pc[4] = m5 = p2*x4 + p5*x5 + p8*x6; 206449b5e25fSSatish Balay pc[5] = m6 = p3*x4 + p6*x5 + p9*x6; 206549b5e25fSSatish Balay 206649b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p4*x8 + p7*x9; 206749b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p5*x8 + p8*x9; 206849b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p6*x8 + p9*x9; 206949b5e25fSSatish Balay 207049b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 207149b5e25fSSatish Balay pv += 9; 207249b5e25fSSatish Balay for (j=0; j<nz; j++) { 207349b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 207449b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 207549b5e25fSSatish Balay x = rtmp + 9*pj[j]; 207649b5e25fSSatish Balay x[0] -= m1*x1 + m4*x2 + m7*x3; 207749b5e25fSSatish Balay x[1] -= m2*x1 + m5*x2 + m8*x3; 207849b5e25fSSatish Balay x[2] -= m3*x1 + m6*x2 + m9*x3; 207949b5e25fSSatish Balay 208049b5e25fSSatish Balay x[3] -= m1*x4 + m4*x5 + m7*x6; 208149b5e25fSSatish Balay x[4] -= m2*x4 + m5*x5 + m8*x6; 208249b5e25fSSatish Balay x[5] -= m3*x4 + m6*x5 + m9*x6; 208349b5e25fSSatish Balay 208449b5e25fSSatish Balay x[6] -= m1*x7 + m4*x8 + m7*x9; 208549b5e25fSSatish Balay x[7] -= m2*x7 + m5*x8 + m8*x9; 208649b5e25fSSatish Balay x[8] -= m3*x7 + m6*x8 + m9*x9; 208749b5e25fSSatish Balay pv += 9; 208849b5e25fSSatish Balay } 208949b5e25fSSatish Balay PLogFlops(54*nz+36); 209049b5e25fSSatish Balay } 209149b5e25fSSatish Balay row = *ajtmp++; 209249b5e25fSSatish Balay } 209349b5e25fSSatish Balay /* finished row so stick it into b->a */ 209449b5e25fSSatish Balay pv = ba + 9*bi[i]; 209549b5e25fSSatish Balay pj = bj + bi[i]; 209649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 209749b5e25fSSatish Balay for (j=0; j<nz; j++) { 209849b5e25fSSatish Balay x = rtmp+9*pj[j]; 209949b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 210049b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 210149b5e25fSSatish Balay pv += 9; 210249b5e25fSSatish Balay } 210349b5e25fSSatish Balay /* invert diagonal block */ 210449b5e25fSSatish Balay w = ba + 9*diag_offset[i]; 210549b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_3(w);CHKERRQ(ierr); 210649b5e25fSSatish Balay } 210749b5e25fSSatish Balay 210849b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 210949b5e25fSSatish Balay C->factor = FACTOR_LU; 211049b5e25fSSatish Balay C->assembled = PETSC_TRUE; 211149b5e25fSSatish Balay PLogFlops(1.3333*27*b->mbs); /* from inverting diagonal blocks */ 211249b5e25fSSatish Balay PetscFunctionReturn(0); 211349b5e25fSSatish Balay } 211449b5e25fSSatish Balay 211549b5e25fSSatish Balay /* 211649b5e25fSSatish Balay Version for when blocks are 2 by 2 211749b5e25fSSatish Balay */ 211849b5e25fSSatish Balay #undef __FUNC__ 21196f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2" 21206f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2(Mat A,Mat *B) 212149b5e25fSSatish Balay { 212249b5e25fSSatish Balay Mat C = *B; 212349b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 212449b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 212549b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 212649b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 212749b5e25fSSatish Balay int *diag_offset=b->diag,idx,*ai=a->i,*aj=a->j,*pj; 212849b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,m1,m2,m3,m4,*pc,*w,*x,x1,x2,x3,x4; 212949b5e25fSSatish Balay MatScalar p1,p2,p3,p4; 213049b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 213149b5e25fSSatish Balay 213249b5e25fSSatish Balay PetscFunctionBegin; 213349b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 213449b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 213549b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(4*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 213649b5e25fSSatish Balay 213749b5e25fSSatish Balay for (i=0; i<n; i++) { 213849b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 213949b5e25fSSatish Balay ajtmp = bj + bi[i]; 214049b5e25fSSatish Balay for (j=0; j<nz; j++) { 214149b5e25fSSatish Balay x = rtmp+4*ajtmp[j]; x[0] = x[1] = x[2] = x[3] = 0.0; 214249b5e25fSSatish Balay } 214349b5e25fSSatish Balay /* load in initial (unfactored row) */ 214449b5e25fSSatish Balay idx = r[i]; 214549b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 214649b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 214749b5e25fSSatish Balay v = aa + 4*ai[idx]; 214849b5e25fSSatish Balay for (j=0; j<nz; j++) { 214949b5e25fSSatish Balay x = rtmp+4*ic[ajtmpold[j]]; 215049b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 215149b5e25fSSatish Balay v += 4; 215249b5e25fSSatish Balay } 215349b5e25fSSatish Balay row = *ajtmp++; 215449b5e25fSSatish Balay while (row < i) { 215549b5e25fSSatish Balay pc = rtmp + 4*row; 215649b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 215749b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0) { 215849b5e25fSSatish Balay pv = ba + 4*diag_offset[row]; 215949b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 216049b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 216149b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p3*x2; 216249b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p4*x2; 216349b5e25fSSatish Balay pc[2] = m3 = p1*x3 + p3*x4; 216449b5e25fSSatish Balay pc[3] = m4 = p2*x3 + p4*x4; 216549b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 216649b5e25fSSatish Balay pv += 4; 216749b5e25fSSatish Balay for (j=0; j<nz; j++) { 216849b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 216949b5e25fSSatish Balay x = rtmp + 4*pj[j]; 217049b5e25fSSatish Balay x[0] -= m1*x1 + m3*x2; 217149b5e25fSSatish Balay x[1] -= m2*x1 + m4*x2; 217249b5e25fSSatish Balay x[2] -= m1*x3 + m3*x4; 217349b5e25fSSatish Balay x[3] -= m2*x3 + m4*x4; 217449b5e25fSSatish Balay pv += 4; 217549b5e25fSSatish Balay } 217649b5e25fSSatish Balay PLogFlops(16*nz+12); 217749b5e25fSSatish Balay } 217849b5e25fSSatish Balay row = *ajtmp++; 217949b5e25fSSatish Balay } 218049b5e25fSSatish Balay /* finished row so stick it into b->a */ 218149b5e25fSSatish Balay pv = ba + 4*bi[i]; 218249b5e25fSSatish Balay pj = bj + bi[i]; 218349b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 218449b5e25fSSatish Balay for (j=0; j<nz; j++) { 218549b5e25fSSatish Balay x = rtmp+4*pj[j]; 218649b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 218749b5e25fSSatish Balay pv += 4; 218849b5e25fSSatish Balay } 218949b5e25fSSatish Balay /* invert diagonal block */ 219049b5e25fSSatish Balay w = ba + 4*diag_offset[i]; 219149b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_2(w);CHKERRQ(ierr); 219249b5e25fSSatish Balay /*Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work);*/ 219349b5e25fSSatish Balay } 219449b5e25fSSatish Balay 219549b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 219649b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 219749b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 219849b5e25fSSatish Balay C->factor = FACTOR_LU; 219949b5e25fSSatish Balay C->assembled = PETSC_TRUE; 220049b5e25fSSatish Balay PLogFlops(1.3333*8*b->mbs); /* from inverting diagonal blocks */ 220149b5e25fSSatish Balay PetscFunctionReturn(0); 220249b5e25fSSatish Balay } 220349b5e25fSSatish Balay /* 220449b5e25fSSatish Balay Version for when blocks are 2 by 2 Using natural ordering 220549b5e25fSSatish Balay */ 220649b5e25fSSatish Balay #undef __FUNC__ 22076f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering" 22086f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering(Mat A,Mat *B) 220949b5e25fSSatish Balay { 221049b5e25fSSatish Balay Mat C = *B; 221149b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 221249b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 221349b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 221449b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 221549b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 221649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,x1,x2,x3,x4; 221749b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 221849b5e25fSSatish Balay 221949b5e25fSSatish Balay PetscFunctionBegin; 222049b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(4*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 222149b5e25fSSatish Balay 222249b5e25fSSatish Balay for (i=0; i<n; i++) { 222349b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 222449b5e25fSSatish Balay ajtmp = bj + bi[i]; 222549b5e25fSSatish Balay for (j=0; j<nz; j++) { 222649b5e25fSSatish Balay x = rtmp+4*ajtmp[j]; 222749b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = 0.0; 222849b5e25fSSatish Balay } 222949b5e25fSSatish Balay /* load in initial (unfactored row) */ 223049b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 223149b5e25fSSatish Balay ajtmpold = aj + ai[i]; 223249b5e25fSSatish Balay v = aa + 4*ai[i]; 223349b5e25fSSatish Balay for (j=0; j<nz; j++) { 223449b5e25fSSatish Balay x = rtmp+4*ajtmpold[j]; 223549b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 223649b5e25fSSatish Balay v += 4; 223749b5e25fSSatish Balay } 223849b5e25fSSatish Balay row = *ajtmp++; 223949b5e25fSSatish Balay while (row < i) { 224049b5e25fSSatish Balay pc = rtmp + 4*row; 224149b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 224249b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0) { 224349b5e25fSSatish Balay pv = ba + 4*diag_offset[row]; 224449b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 224549b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 224649b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p3*x2; 224749b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p4*x2; 224849b5e25fSSatish Balay pc[2] = m3 = p1*x3 + p3*x4; 224949b5e25fSSatish Balay pc[3] = m4 = p2*x3 + p4*x4; 225049b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 225149b5e25fSSatish Balay pv += 4; 225249b5e25fSSatish Balay for (j=0; j<nz; j++) { 225349b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 225449b5e25fSSatish Balay x = rtmp + 4*pj[j]; 225549b5e25fSSatish Balay x[0] -= m1*x1 + m3*x2; 225649b5e25fSSatish Balay x[1] -= m2*x1 + m4*x2; 225749b5e25fSSatish Balay x[2] -= m1*x3 + m3*x4; 225849b5e25fSSatish Balay x[3] -= m2*x3 + m4*x4; 225949b5e25fSSatish Balay pv += 4; 226049b5e25fSSatish Balay } 226149b5e25fSSatish Balay PLogFlops(16*nz+12); 226249b5e25fSSatish Balay } 226349b5e25fSSatish Balay row = *ajtmp++; 226449b5e25fSSatish Balay } 226549b5e25fSSatish Balay /* finished row so stick it into b->a */ 226649b5e25fSSatish Balay pv = ba + 4*bi[i]; 226749b5e25fSSatish Balay pj = bj + bi[i]; 226849b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 226949b5e25fSSatish Balay for (j=0; j<nz; j++) { 227049b5e25fSSatish Balay x = rtmp+4*pj[j]; 227149b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 227249b5e25fSSatish Balay pv += 4; 227349b5e25fSSatish Balay } 227449b5e25fSSatish Balay /* invert diagonal block */ 227549b5e25fSSatish Balay w = ba + 4*diag_offset[i]; 227649b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_2(w);CHKERRQ(ierr); 227749b5e25fSSatish Balay /*Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work);*/ 227849b5e25fSSatish Balay } 227949b5e25fSSatish Balay 228049b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 228149b5e25fSSatish Balay C->factor = FACTOR_LU; 228249b5e25fSSatish Balay C->assembled = PETSC_TRUE; 228349b5e25fSSatish Balay PLogFlops(1.3333*8*b->mbs); /* from inverting diagonal blocks */ 228449b5e25fSSatish Balay PetscFunctionReturn(0); 228549b5e25fSSatish Balay } 228649b5e25fSSatish Balay 228749b5e25fSSatish Balay /* 228849b5e25fSSatish Balay Version for when blocks are 1 by 1. 228949b5e25fSSatish Balay */ 229049b5e25fSSatish Balay #undef __FUNC__ 22916f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_1" 22926f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_1(Mat A,Mat *B) 229349b5e25fSSatish Balay { 229449b5e25fSSatish Balay Mat C = *B; 229549b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data; 229649b5e25fSSatish Balay IS ip = b->row; 2297066653e3SSatish Balay int *rip,*riip,ierr,i,j,mbs = a->mbs,*bi = b->i,*bj = b->j; 2298*2d007305SHong Zhang int *ai,*aj,*a2anew,*r; 2299066653e3SSatish Balay MatScalar *rtmp; 2300*2d007305SHong Zhang MatScalar *ba = b->a,*aa,ak; 230149b5e25fSSatish Balay MatScalar dk,uikdi; 230249b5e25fSSatish Balay int k,jmin,jmax,*jl,*il,vj,nexti,juj,ili; 2303*2d007305SHong Zhang PetscTruth flg_perm = PETSC_FALSE; /* non-trivial permutation */ 230449b5e25fSSatish Balay 230549b5e25fSSatish Balay PetscFunctionBegin; 230649b5e25fSSatish Balay ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 230749b5e25fSSatish Balay riip = rip; 230849b5e25fSSatish Balay 2309*2d007305SHong Zhang if (!flg_perm){ 2310*2d007305SHong Zhang ai = a->i; aj = a->j; aa = a->a; 2311*2d007305SHong Zhang } else { 2312*2d007305SHong Zhang 2313*2d007305SHong Zhang ai = a->inew; aj = a->jnew; 2314*2d007305SHong Zhang 2315*2d007305SHong Zhang aa = (MatScalar*)PetscMalloc(ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa); 2316*2d007305SHong Zhang ierr = PetscMemcpy(aa,a->a,(ai[mbs])*sizeof(MatScalar));CHKERRQ(ierr); 2317*2d007305SHong Zhang 2318*2d007305SHong Zhang r = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(r); 2319*2d007305SHong Zhang ierr= PetscMemcpy(r,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr); 2320*2d007305SHong Zhang 2321*2d007305SHong Zhang jmin = ai[0]; jmax = ai[mbs]; 2322*2d007305SHong Zhang for (j=jmin; j<jmax; j++){ 2323*2d007305SHong Zhang while (a2anew[j] != j){ 2324*2d007305SHong Zhang k = r[j]; r[j] = r[k]; r[k] = k; 2325*2d007305SHong Zhang ak = aa[k]; aa[k] = aa[j]; aa[j] = ak; 2326*2d007305SHong Zhang } 2327*2d007305SHong Zhang } 2328*2d007305SHong Zhang a->anew = aa; 2329*2d007305SHong Zhang ierr = PetscFree(r);CHKERRA(ierr); 2330*2d007305SHong Zhang } 2331*2d007305SHong Zhang 233249b5e25fSSatish Balay /* INITIALIZATION */ 233349b5e25fSSatish Balay /* il and jl record the first nonzero element in each row of the accessing 233449b5e25fSSatish Balay window U(0:k, k:mbs-1). 233549b5e25fSSatish Balay jl: list of rows to be added to uneliminated rows 233649b5e25fSSatish Balay i>= k: jl(i) is the first row to be added to row i 233749b5e25fSSatish Balay i< k: jl(i) is the row following row i in some list of rows 233849b5e25fSSatish Balay jl(i) = mbs indicates the end of a list 233949b5e25fSSatish Balay il(i): points to the first nonzero element in columns k,...,mbs-1 of 234049b5e25fSSatish Balay row i of U */ 234149b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(mbs*sizeof(MatScalar));CHKPTRQ(rtmp); 234249b5e25fSSatish Balay il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il); 234349b5e25fSSatish Balay jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 234449b5e25fSSatish Balay for (i=0; i<mbs; i++) { 234549b5e25fSSatish Balay rtmp[i] = 0.0; jl[i] = mbs; il[0] = 0; 234649b5e25fSSatish Balay } 234749b5e25fSSatish Balay 234849b5e25fSSatish Balay /* FOR EACH ROW K */ 234949b5e25fSSatish Balay for (k = 0; k<mbs; k++){ 235049b5e25fSSatish Balay 235149b5e25fSSatish Balay /* INITIALIZE K-TH ROW WITH ELEMENTS NONZERO IN ROW P(K) OF A */ 235249b5e25fSSatish Balay jmin = ai[rip[k]]; jmax = ai[rip[k]+1]; 235349b5e25fSSatish Balay if (jmin < jmax) { 235449b5e25fSSatish Balay for (j = jmin; j < jmax; j++){ 235549b5e25fSSatish Balay vj = riip[aj[j]]; 235649b5e25fSSatish Balay if (k <= vj) rtmp[vj] = aa[j]; 235749b5e25fSSatish Balay } 235849b5e25fSSatish Balay } 235949b5e25fSSatish Balay 236049b5e25fSSatish Balay /* MODIFY K-TH ROW BY ADDING IN THOSE ROWS I WITH U(I,K) NE 0 236149b5e25fSSatish Balay FOR EACH ROW I TO BE ADDED IN */ 236249b5e25fSSatish Balay dk = rtmp[k]; 236349b5e25fSSatish Balay i = jl[k]; /* first row to be added to k_th row */ 236449b5e25fSSatish Balay /* printf(" k=%d, pivot row = %d\n",k,i); */ 236549b5e25fSSatish Balay 236649b5e25fSSatish Balay while (i < mbs){ 236749b5e25fSSatish Balay nexti = jl[i]; /* next row to be added to k_th row */ 236849b5e25fSSatish Balay /* printf(" pivot row = %d\n", nexti); */ 236949b5e25fSSatish Balay 237049b5e25fSSatish Balay /* COMPUTE MULTIPLIER AND UPDATE DIAGONAL ELEMENT */ 237149b5e25fSSatish Balay ili = il[i]; /* index of first nonzero element in U(i,k:bms-1) */ 237249b5e25fSSatish Balay uikdi = - ba[ili]*ba[i]; 237349b5e25fSSatish Balay dk += uikdi*ba[ili]; 237449b5e25fSSatish Balay ba[ili] = uikdi; /* update U(i,k) */ 237549b5e25fSSatish Balay 237649b5e25fSSatish Balay /* ADD MULTIPLE OF ROW I TO K-TH ROW ... */ 237749b5e25fSSatish Balay jmin = ili + 1; jmax = bi[i+1]; 237849b5e25fSSatish Balay if (jmin < jmax){ 237949b5e25fSSatish Balay for (j=jmin; j<jmax; j++) rtmp[bj[j]] += uikdi*ba[j]; 238049b5e25fSSatish Balay /* ... AND ADD I TO ROW LIST FOR NEXT NONZERO ENTRY */ 238149b5e25fSSatish Balay il[i] = jmin; /* update il(i) in column k+1, ... mbs-1 */ 238249b5e25fSSatish Balay j = bj[jmin]; 238349b5e25fSSatish Balay jl[i] = jl[j]; jl[j] = i; /* update jl */ 238449b5e25fSSatish Balay } 238549b5e25fSSatish Balay i = nexti; 238649b5e25fSSatish Balay /* printf(" pivot row i=%d\n",i); */ 238749b5e25fSSatish Balay } 238849b5e25fSSatish Balay 238949b5e25fSSatish Balay /* CHECK FOR ZERO PIVOT AND SAVE DIAGONAL ELEMENT */ 239049b5e25fSSatish Balay if (dk == 0.0){ 239149b5e25fSSatish Balay SETERRQ(PETSC_ERR_MAT_LU_ZRPVT,0,"Zero pivot"); 239249b5e25fSSatish Balay } 239349b5e25fSSatish Balay 239449b5e25fSSatish Balay /* SAVE NONZERO ENTRIES IN K-TH ROW OF U ... */ 2395f3dd7b2dSKris Buschelman ba[k] = 1.0/dk; 239649b5e25fSSatish Balay jmin = bi[k]; jmax = bi[k+1]; 239749b5e25fSSatish Balay if (jmin < jmax) { 239849b5e25fSSatish Balay for (j=jmin; j<jmax; j++){ 239949b5e25fSSatish Balay juj = bj[j]; ba[j] = rtmp[juj]; rtmp[juj] = 0.0; 240049b5e25fSSatish Balay } 240149b5e25fSSatish Balay 240249b5e25fSSatish Balay /* ... AND ADD K TO ROW LIST FOR FIRST NONZERO ENTRY IN K-TH ROW */ 240349b5e25fSSatish Balay il[k] = jmin; 240449b5e25fSSatish Balay i = bj[jmin]; 240549b5e25fSSatish Balay jl[k] = jl[i]; jl[i] = k; 240649b5e25fSSatish Balay } 240749b5e25fSSatish Balay } 240849b5e25fSSatish Balay 240949b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 241049b5e25fSSatish Balay ierr = PetscFree(il);CHKERRQ(ierr); 241149b5e25fSSatish Balay ierr = PetscFree(jl);CHKERRQ(ierr); 241249b5e25fSSatish Balay 241349b5e25fSSatish Balay ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 241449b5e25fSSatish Balay C->factor = FACTOR_LU; 241549b5e25fSSatish Balay C->assembled = PETSC_TRUE; 241649b5e25fSSatish Balay PLogFlops(b->mbs); 241749b5e25fSSatish Balay PetscFunctionReturn(0); 241849b5e25fSSatish Balay } 241949b5e25fSSatish Balay 242049b5e25fSSatish Balay #undef __FUNC__ 24216f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactor_SeqSBAIJ" 2422b8b23757SHong Zhang int MatCholeskyFactor_SeqSBAIJ(Mat A,IS perm,PetscReal f) 242349b5e25fSSatish Balay { 24246f9a564bSHong Zhang Mat_SeqSBAIJ *mat = (Mat_SeqSBAIJ*)A->data; 242549b5e25fSSatish Balay int ierr,refct; 242649b5e25fSSatish Balay Mat C; 242749b5e25fSSatish Balay PetscOps *Abops; 242849b5e25fSSatish Balay MatOps Aops; 242949b5e25fSSatish Balay 243049b5e25fSSatish Balay PetscFunctionBegin; 2431b8b23757SHong Zhang ierr = MatCholeskyFactorSymbolic(A,perm,f,&C);CHKERRQ(ierr); 2432a4ada70bSHong Zhang ierr = MatCholeskyFactorNumeric(A,&C);CHKERRQ(ierr); 243349b5e25fSSatish Balay 243449b5e25fSSatish Balay /* free all the data structures from mat */ 243549b5e25fSSatish Balay ierr = PetscFree(mat->a);CHKERRQ(ierr); 243649b5e25fSSatish Balay if (!mat->singlemalloc) { 243749b5e25fSSatish Balay ierr = PetscFree(mat->i);CHKERRQ(ierr); 243849b5e25fSSatish Balay ierr = PetscFree(mat->j);CHKERRQ(ierr); 243949b5e25fSSatish Balay } 244049b5e25fSSatish Balay if (mat->diag) {ierr = PetscFree(mat->diag);CHKERRQ(ierr);} 244149b5e25fSSatish Balay if (mat->ilen) {ierr = PetscFree(mat->ilen);CHKERRQ(ierr);} 244249b5e25fSSatish Balay if (mat->imax) {ierr = PetscFree(mat->imax);CHKERRQ(ierr);} 244349b5e25fSSatish Balay if (mat->solve_work) {ierr = PetscFree(mat->solve_work);CHKERRQ(ierr);} 244449b5e25fSSatish Balay if (mat->mult_work) {ierr = PetscFree(mat->mult_work);CHKERRQ(ierr);} 244549b5e25fSSatish Balay if (mat->icol) {ierr = ISDestroy(mat->icol);CHKERRQ(ierr);} 244649b5e25fSSatish Balay ierr = PetscFree(mat);CHKERRQ(ierr); 244749b5e25fSSatish Balay 244849b5e25fSSatish Balay ierr = MapDestroy(A->rmap);CHKERRQ(ierr); 244949b5e25fSSatish Balay ierr = MapDestroy(A->cmap);CHKERRQ(ierr); 245049b5e25fSSatish Balay 245149b5e25fSSatish Balay /* 245249b5e25fSSatish Balay This is horrible,horrible code. We need to keep the 245349b5e25fSSatish Balay A pointers for the bops and ops but copy everything 245449b5e25fSSatish Balay else from C. 245549b5e25fSSatish Balay */ 245649b5e25fSSatish Balay Abops = A->bops; 245749b5e25fSSatish Balay Aops = A->ops; 245849b5e25fSSatish Balay refct = A->refct; 245949b5e25fSSatish Balay ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr); 2460a4ada70bSHong Zhang mat = (Mat_SeqSBAIJ*)A->data; 246149b5e25fSSatish Balay PLogObjectParent(A,mat->icol); 246249b5e25fSSatish Balay 246349b5e25fSSatish Balay A->bops = Abops; 246449b5e25fSSatish Balay A->ops = Aops; 246549b5e25fSSatish Balay A->qlist = 0; 246649b5e25fSSatish Balay A->refct = refct; 246749b5e25fSSatish Balay /* copy over the type_name and name */ 246849b5e25fSSatish Balay ierr = PetscStrallocpy(C->type_name,&A->type_name);CHKERRQ(ierr); 246949b5e25fSSatish Balay ierr = PetscStrallocpy(C->name,&A->name);CHKERRQ(ierr); 247049b5e25fSSatish Balay 247149b5e25fSSatish Balay PetscHeaderDestroy(C); 247249b5e25fSSatish Balay PetscFunctionReturn(0); 247349b5e25fSSatish Balay } 247449b5e25fSSatish Balay 247549b5e25fSSatish Balay 2476