149b5e25fSSatish Balay /* Using Modified Sparse Row (MSR) storage. 249b5e25fSSatish Balay See page 85, "Iterative Methods ..." by Saad. */ 349b5e25fSSatish Balay 4*a1723e09SHong Zhang /*$Id: sbaijfact.c,v 1.31 2000/10/26 20:34:41 hzhang Exp hzhang $*/ 549b5e25fSSatish Balay /* 6658e7b3eSHong Zhang Symbolic (-UT)*D*(-U) factorization for SBAIJ format. Modified from SSF of YSMP. 749b5e25fSSatish Balay */ 849b5e25fSSatish Balay #include "sbaij.h" 949b5e25fSSatish Balay #include "src/mat/impls/baij/seq/baij.h" 1049b5e25fSSatish Balay #include "src/vec/vecimpl.h" 1149b5e25fSSatish Balay #include "src/inline/ilu.h" 1249a6740bSHong Zhang #include "include/petscis.h" 1349b5e25fSSatish Balay 1449b5e25fSSatish Balay #undef __FUNC__ 156f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorSymbolic_SeqSBAIJ" 1677f73120SHong Zhang int MatCholeskyFactorSymbolic_SeqSBAIJ(Mat A,IS perm,PetscReal f,Mat *B) 1749b5e25fSSatish Balay { 1849b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b; 19cb718733SHong Zhang int *rip,ierr,i,mbs = a->mbs,*ai,*aj; 20066653e3SSatish Balay int *jutmp,bs = a->bs,bs2=a->bs2; 21066653e3SSatish Balay int m,nzi,realloc = 0; 22066653e3SSatish Balay int *jl,*q,jumin,jmin,jmax,juptr,nzk,qm,*iu,*ju,k,j,vj,umax,maxadd; 23cb718733SHong Zhang /* PetscTruth ident; */ 2449b5e25fSSatish Balay 2549b5e25fSSatish Balay PetscFunctionBegin; 2677f73120SHong Zhang PetscValidHeaderSpecific(perm,IS_COOKIE); 2729bbc08cSBarry Smith if (A->M != A->N) SETERRQ(PETSC_ERR_ARG_WRONG,"matrix must be square"); 282d007305SHong Zhang 29cb718733SHong Zhang /* check whether perm is the identity mapping */ 30cb718733SHong Zhang /* 31cb718733SHong Zhang ierr = ISView(perm, VIEWER_STDOUT_SELF);CHKERRA(ierr); 32cb718733SHong Zhang ierr = ISIdentity(perm,&ident);CHKERRQ(ierr); 33cb718733SHong Zhang printf("ident = %d\n", ident); 34cb718733SHong Zhang */ 35cb718733SHong Zhang ierr = ISGetIndices(perm,&rip);CHKERRQ(ierr); 36cb718733SHong Zhang for (i=0; i<mbs; i++){ 37cb718733SHong Zhang if (rip[i] != i){ 38cb718733SHong Zhang a->permute = PETSC_TRUE; 39cb718733SHong Zhang /* printf("non-trivial perm\n"); */ 40cb718733SHong Zhang break; 4149a6740bSHong Zhang } 42cb718733SHong Zhang } 432d007305SHong Zhang 44cb718733SHong Zhang if (!a->permute){ /* without permutation */ 452d007305SHong Zhang ai = a->i; aj = a->j; 462d007305SHong Zhang } else { /* non-trivial permutation */ 472d007305SHong Zhang ierr = MatReorderingSeqSBAIJ(A, perm);CHKERRA(ierr); 482d007305SHong Zhang ai = a->inew; aj = a->jnew; 492d007305SHong Zhang } 502d007305SHong Zhang 5149b5e25fSSatish Balay /* initialization */ 5249b5e25fSSatish Balay /* Don't know how many column pointers are needed so estimate. 5349b5e25fSSatish Balay Use Modified Sparse Row storage for u and ju, see Sasd pp.85 */ 549f9cb213SHong Zhang iu = (int*)PetscMalloc((mbs+1)*sizeof(int));CHKPTRQ(iu); 5549b5e25fSSatish Balay umax = (int)(f*ai[mbs] + 1); umax += mbs + 1; 569f9cb213SHong Zhang ju = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(ju); 5749b5e25fSSatish Balay iu[0] = mbs+1; 5849b5e25fSSatish Balay juptr = mbs; 5949b5e25fSSatish Balay jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 6049b5e25fSSatish Balay q = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(q); 6149b5e25fSSatish Balay for (i=0; i<mbs; i++){ 6249b5e25fSSatish Balay jl[i] = mbs; q[i] = 0; 6349b5e25fSSatish Balay } 6449b5e25fSSatish Balay 6549b5e25fSSatish Balay /* for each row k */ 6649b5e25fSSatish Balay for (k=0; k<mbs; k++){ 6749b5e25fSSatish Balay nzk = 0; /* num. of nz blocks in k-th block row with diagonal block excluded */ 6849b5e25fSSatish Balay q[k] = mbs; 6949b5e25fSSatish Balay /* initialize nonzero structure of k-th row to row rip[k] of A */ 7049b5e25fSSatish Balay jmin = ai[rip[k]]; 7149b5e25fSSatish Balay jmax = ai[rip[k]+1]; 7249b5e25fSSatish Balay for (j=jmin; j<jmax; j++){ 73cb718733SHong Zhang vj = rip[aj[j]]; /* col. value */ 7449b5e25fSSatish Balay if(vj > k){ 7549b5e25fSSatish Balay qm = k; 7649b5e25fSSatish Balay do { 7749b5e25fSSatish Balay m = qm; qm = q[m]; 7849b5e25fSSatish Balay } while(qm < vj); 7949b5e25fSSatish Balay if (qm == vj) { 8049b5e25fSSatish Balay printf(" error: duplicate entry in A\n"); break; 8149b5e25fSSatish Balay } 8249b5e25fSSatish Balay nzk++; 8349b5e25fSSatish Balay q[m] = vj; 8449b5e25fSSatish Balay q[vj] = qm; 8549b5e25fSSatish Balay } /* if(vj > k) */ 8649b5e25fSSatish Balay } /* for (j=jmin; j<jmax; j++) */ 8749b5e25fSSatish Balay 8849b5e25fSSatish Balay /* modify nonzero structure of k-th row by computing fill-in 8949b5e25fSSatish Balay for each row i to be merged in */ 9049b5e25fSSatish Balay i = k; 9149b5e25fSSatish Balay i = jl[i]; /* next pivot row (== mbs for symbolic factorization) */ 9249b5e25fSSatish Balay /* printf(" next pivot row i=%d\n",i); */ 9349b5e25fSSatish Balay while (i < mbs){ 9449b5e25fSSatish Balay /* merge row i into k-th row */ 9549b5e25fSSatish Balay nzi = iu[i+1] - (iu[i]+1); 9649b5e25fSSatish Balay jmin = iu[i] + 1; jmax = iu[i] + nzi; 9749b5e25fSSatish Balay qm = k; 9849b5e25fSSatish Balay for (j=jmin; j<jmax+1; j++){ 9949b5e25fSSatish Balay vj = ju[j]; 10049b5e25fSSatish Balay do { 10149b5e25fSSatish Balay m = qm; qm = q[m]; 10249b5e25fSSatish Balay } while (qm < vj); 10349b5e25fSSatish Balay if (qm != vj){ 10449b5e25fSSatish Balay nzk++; q[m] = vj; q[vj] = qm; qm = vj; 10549b5e25fSSatish Balay } 10649b5e25fSSatish Balay } 10749b5e25fSSatish Balay i = jl[i]; /* next pivot row */ 10849b5e25fSSatish Balay } 10949b5e25fSSatish Balay 11049b5e25fSSatish Balay /* add k to row list for first nonzero element in k-th row */ 11149b5e25fSSatish Balay if (nzk > 0){ 11249b5e25fSSatish Balay i = q[k]; /* col value of first nonzero element in U(k, k+1:mbs-1) */ 11349b5e25fSSatish Balay jl[k] = jl[i]; jl[i] = k; 11449b5e25fSSatish Balay } 11549b5e25fSSatish Balay iu[k+1] = iu[k] + nzk; /* printf(" iu[%d]=%d, umax=%d\n", k+1, iu[k+1],umax);*/ 11649b5e25fSSatish Balay 11749b5e25fSSatish Balay /* allocate more space to ju if needed */ 11849b5e25fSSatish Balay if (iu[k+1] > umax) { printf("allocate more space, iu[%d]=%d > umax=%d\n",k+1, iu[k+1],umax); 11949b5e25fSSatish Balay /* estimate how much additional space we will need */ 12049b5e25fSSatish Balay /* use the strategy suggested by David Hysom <hysom@perch-t.icase.edu> */ 12149b5e25fSSatish Balay /* just double the memory each time */ 12249b5e25fSSatish Balay maxadd = umax; 12349b5e25fSSatish Balay if (maxadd < nzk) maxadd = (mbs-k)*(nzk+1)/2; 12449b5e25fSSatish Balay umax += maxadd; 12549b5e25fSSatish Balay 1269f9cb213SHong Zhang /* allocate a longer ju */ 12749b5e25fSSatish Balay jutmp = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(jutmp); 12849b5e25fSSatish Balay ierr = PetscMemcpy(jutmp,ju,iu[k]*sizeof(int));CHKERRQ(ierr); 12949b5e25fSSatish Balay ierr = PetscFree(ju);CHKERRQ(ierr); 1309f9cb213SHong Zhang ju = jutmp; 13149b5e25fSSatish Balay realloc++; /* count how many times we realloc */ 13249b5e25fSSatish Balay } 13349b5e25fSSatish Balay 13449b5e25fSSatish Balay /* save nonzero structure of k-th row in ju */ 13549b5e25fSSatish Balay i=k; 13649b5e25fSSatish Balay jumin = juptr + 1; juptr += nzk; 13749b5e25fSSatish Balay for (j=jumin; j<juptr+1; j++){ 13849b5e25fSSatish Balay i=q[i]; 13949b5e25fSSatish Balay ju[j]=i; 14049b5e25fSSatish Balay } 14177f73120SHong Zhang } 14249b5e25fSSatish Balay 14349b5e25fSSatish Balay if (ai[mbs] != 0) { 14449b5e25fSSatish Balay PetscReal af = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]); 1456f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Reallocs %d Fill ratio:given %g needed %g\n",realloc,f,af); 1466f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Run with -pc_lu_fill %g or use \n",af); 1476f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:PCLUSetFill(pc,%g);\n",af); 1486f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:for best performance.\n"); 14949b5e25fSSatish Balay } else { 1506f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Empty matrix.\n"); 15149b5e25fSSatish Balay } 15249b5e25fSSatish Balay 15377f73120SHong Zhang ierr = ISRestoreIndices(perm,&rip);CHKERRQ(ierr); 15449b5e25fSSatish Balay ierr = PetscFree(q);CHKERRQ(ierr); 15549b5e25fSSatish Balay ierr = PetscFree(jl);CHKERRQ(ierr); 15649b5e25fSSatish Balay 15749b5e25fSSatish Balay /* put together the new matrix */ 15849b5e25fSSatish Balay ierr = MatCreateSeqSBAIJ(A->comm,bs,bs*mbs,bs*mbs,0,PETSC_NULL,B);CHKERRQ(ierr); 1593d840bdaSHong Zhang /* PLogObjectParent(*B,iperm); */ 16049b5e25fSSatish Balay b = (Mat_SeqSBAIJ*)(*B)->data; 16149b5e25fSSatish Balay ierr = PetscFree(b->imax);CHKERRQ(ierr); 16249b5e25fSSatish Balay b->singlemalloc = PETSC_FALSE; 16349b5e25fSSatish Balay /* the next line frees the default space generated by the Create() */ 16449b5e25fSSatish Balay ierr = PetscFree(b->a);CHKERRQ(ierr); 16549b5e25fSSatish Balay ierr = PetscFree(b->ilen);CHKERRQ(ierr); 16649b5e25fSSatish Balay b->a = (MatScalar*)PetscMalloc((iu[mbs]+1)*sizeof(MatScalar)*bs2);CHKPTRQ(b->a); 16749b5e25fSSatish Balay b->j = ju; 16849b5e25fSSatish Balay b->i = iu; 16949b5e25fSSatish Balay b->diag = 0; 17049b5e25fSSatish Balay b->ilen = 0; 17149b5e25fSSatish Balay b->imax = 0; 17277f73120SHong Zhang b->row = perm; 17377f73120SHong Zhang ierr = PetscObjectReference((PetscObject)perm);CHKERRQ(ierr); 174cb718733SHong Zhang b->icol = perm; 175cb718733SHong Zhang ierr = PetscObjectReference((PetscObject)perm);CHKERRQ(ierr); 17649b5e25fSSatish Balay b->solve_work = (Scalar*)PetscMalloc((bs*mbs+bs)*sizeof(Scalar));CHKPTRQ(b->solve_work); 17749b5e25fSSatish Balay /* In b structure: Free imax, ilen, old a, old j. 17849b5e25fSSatish Balay Allocate idnew, solve_work, new a, new j */ 17949b5e25fSSatish Balay PLogObjectMemory(*B,(iu[mbs]-mbs)*(sizeof(int)+sizeof(MatScalar))); 18049b5e25fSSatish Balay b->s_maxnz = b->s_nz = iu[mbs]; 18149b5e25fSSatish Balay 1825c0bcdfcSHong Zhang (*B)->factor = FACTOR_CHOLESKY; 18349b5e25fSSatish Balay (*B)->info.factor_mallocs = realloc; 18449b5e25fSSatish Balay (*B)->info.fill_ratio_given = f; 18549b5e25fSSatish Balay if (ai[mbs] != 0) { 18649b5e25fSSatish Balay (*B)->info.fill_ratio_needed = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]); 18749b5e25fSSatish Balay } else { 18849b5e25fSSatish Balay (*B)->info.fill_ratio_needed = 0.0; 18949b5e25fSSatish Balay } 1905c0bcdfcSHong Zhang #ifdef TEMP 1915c0bcdfcSHong Zhang for (k=0; k<mbs; k++){ 1925c0bcdfcSHong Zhang nzk = b->i[k+1] - b->i[k]; 1935c0bcdfcSHong Zhang printf("\n b->i[%d]: %d, nzk: %d\n",k,b->i[k],nzk); 1945c0bcdfcSHong Zhang jmin = b->i[k]; jmax = b->i[k+1]; 1955c0bcdfcSHong Zhang for (j=jmin; j<jmax; j++){ 1965c0bcdfcSHong Zhang printf(" %d,",b->j[j]); 1975c0bcdfcSHong Zhang } 1985c0bcdfcSHong Zhang } 1995c0bcdfcSHong Zhang #endif 20049b5e25fSSatish Balay PetscFunctionReturn(0); 20149b5e25fSSatish Balay } 20249b5e25fSSatish Balay 20349b5e25fSSatish Balay #undef __FUNC__ 2046f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_N" 2056f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_N(Mat A,Mat *B) 20649b5e25fSSatish Balay { 20749b5e25fSSatish Balay Mat C = *B; 20849b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 20949b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 21049b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 21149b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row,bslog,*ai=a->i,*aj=a->j,k,flg; 21249b5e25fSSatish Balay int *diag_offset=b->diag,diag,bs=a->bs,bs2 = a->bs2,*v_pivots,*pj; 21349b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a,*pv,*v,*rtmp,*multiplier,*v_work,*pc,*w; 21449b5e25fSSatish Balay 21549b5e25fSSatish Balay PetscFunctionBegin; 21649b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 21749b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 21849b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(bs2*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 21949b5e25fSSatish Balay ierr = PetscMemzero(rtmp,bs2*(n+1)*sizeof(MatScalar));CHKERRQ(ierr); 22049b5e25fSSatish Balay /* generate work space needed by dense LU factorization */ 22149b5e25fSSatish Balay v_work = (MatScalar*)PetscMalloc(bs*sizeof(int) + (bs+bs2)*sizeof(MatScalar));CHKPTRQ(v_work); 22249b5e25fSSatish Balay multiplier = v_work + bs; 22349b5e25fSSatish Balay v_pivots = (int*)(multiplier + bs2); 22449b5e25fSSatish Balay 22549b5e25fSSatish Balay /* flops in while loop */ 22649b5e25fSSatish Balay bslog = 2*bs*bs2; 22749b5e25fSSatish Balay 22849b5e25fSSatish Balay for (i=0; i<n; i++) { 22949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 23049b5e25fSSatish Balay ajtmp = bj + bi[i]; 23149b5e25fSSatish Balay for (j=0; j<nz; j++) { 23249b5e25fSSatish Balay ierr = PetscMemzero(rtmp+bs2*ajtmp[j],bs2*sizeof(MatScalar));CHKERRQ(ierr); 23349b5e25fSSatish Balay } 23449b5e25fSSatish Balay /* load in initial (unfactored row) */ 23549b5e25fSSatish Balay nz = ai[r[i]+1] - ai[r[i]]; 23649b5e25fSSatish Balay ajtmpold = aj + ai[r[i]]; 23749b5e25fSSatish Balay v = aa + bs2*ai[r[i]]; 23849b5e25fSSatish Balay for (j=0; j<nz; j++) { 23949b5e25fSSatish Balay ierr = PetscMemcpy(rtmp+bs2*ic[ajtmpold[j]],v+bs2*j,bs2*sizeof(MatScalar));CHKERRQ(ierr); 24049b5e25fSSatish Balay } 24149b5e25fSSatish Balay row = *ajtmp++; 24249b5e25fSSatish Balay while (row < i) { 24349b5e25fSSatish Balay pc = rtmp + bs2*row; 24449b5e25fSSatish Balay /* if (*pc) { */ 24549b5e25fSSatish Balay for (flg=0,k=0; k<bs2; k++) { if (pc[k]!=0.0) { flg =1; break; }} 24649b5e25fSSatish Balay if (flg) { 24749b5e25fSSatish Balay pv = ba + bs2*diag_offset[row]; 24849b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 24949b5e25fSSatish Balay Kernel_A_gets_A_times_B(bs,pc,pv,multiplier); 25049b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 25149b5e25fSSatish Balay pv += bs2; 25249b5e25fSSatish Balay for (j=0; j<nz; j++) { 25349b5e25fSSatish Balay Kernel_A_gets_A_minus_B_times_C(bs,rtmp+bs2*pj[j],pc,pv+bs2*j); 25449b5e25fSSatish Balay } 25549b5e25fSSatish Balay PLogFlops(bslog*(nz+1)-bs); 25649b5e25fSSatish Balay } 25749b5e25fSSatish Balay row = *ajtmp++; 25849b5e25fSSatish Balay } 25949b5e25fSSatish Balay /* finished row so stick it into b->a */ 26049b5e25fSSatish Balay pv = ba + bs2*bi[i]; 26149b5e25fSSatish Balay pj = bj + bi[i]; 26249b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 26349b5e25fSSatish Balay for (j=0; j<nz; j++) { 26449b5e25fSSatish Balay ierr = PetscMemcpy(pv+bs2*j,rtmp+bs2*pj[j],bs2*sizeof(MatScalar));CHKERRQ(ierr); 26549b5e25fSSatish Balay } 26649b5e25fSSatish Balay diag = diag_offset[i] - bi[i]; 26749b5e25fSSatish Balay /* invert diagonal block */ 26849b5e25fSSatish Balay w = pv + bs2*diag; 26949b5e25fSSatish Balay Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work); 27049b5e25fSSatish Balay } 27149b5e25fSSatish Balay 27249b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 27349b5e25fSSatish Balay ierr = PetscFree(v_work);CHKERRQ(ierr); 27449b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 27549b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 27649b5e25fSSatish Balay C->factor = FACTOR_LU; 27749b5e25fSSatish Balay C->assembled = PETSC_TRUE; 27849b5e25fSSatish Balay PLogFlops(1.3333*bs*bs2*b->mbs); /* from inverting diagonal blocks */ 27949b5e25fSSatish Balay PetscFunctionReturn(0); 28049b5e25fSSatish Balay } 281d4edadd4SHong Zhang 28249b5e25fSSatish Balay /* 28349b5e25fSSatish Balay Version for when blocks are 7 by 7 28449b5e25fSSatish Balay */ 28549b5e25fSSatish Balay #undef __FUNC__ 2866f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7" 2876f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7(Mat A,Mat *B) 28849b5e25fSSatish Balay { 28949b5e25fSSatish Balay Mat C = *B; 29049b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 29149b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 29249b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 29349b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 29449b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 29549b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 29649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 29749b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 29849b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 29949b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 30049b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 30149b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 30249b5e25fSSatish Balay MatScalar p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49; 30349b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 30449b5e25fSSatish Balay MatScalar x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49; 30549b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 30649b5e25fSSatish Balay MatScalar m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49; 30749b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 30849b5e25fSSatish Balay 30949b5e25fSSatish Balay PetscFunctionBegin; 31049b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 31149b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 31249b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 31349b5e25fSSatish Balay 31449b5e25fSSatish Balay for (i=0; i<n; i++) { 31549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 31649b5e25fSSatish Balay ajtmp = bj + bi[i]; 31749b5e25fSSatish Balay for (j=0; j<nz; j++) { 31849b5e25fSSatish Balay x = rtmp+49*ajtmp[j]; 31949b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 32049b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 32149b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 32249b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 32349b5e25fSSatish Balay x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ; 32449b5e25fSSatish Balay x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ; 32549b5e25fSSatish Balay } 32649b5e25fSSatish Balay /* load in initial (unfactored row) */ 32749b5e25fSSatish Balay idx = r[i]; 32849b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 32949b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 33049b5e25fSSatish Balay v = aa + 49*ai[idx]; 33149b5e25fSSatish Balay for (j=0; j<nz; j++) { 33249b5e25fSSatish Balay x = rtmp+49*ic[ajtmpold[j]]; 33349b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 33449b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 33549b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 33649b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 33749b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 33849b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 33949b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 34049b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 34149b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 34249b5e25fSSatish Balay x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39]; 34349b5e25fSSatish Balay x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43]; 34449b5e25fSSatish Balay x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47]; 34549b5e25fSSatish Balay x[48] = v[48]; 34649b5e25fSSatish Balay v += 49; 34749b5e25fSSatish Balay } 34849b5e25fSSatish Balay row = *ajtmp++; 34949b5e25fSSatish Balay while (row < i) { 35049b5e25fSSatish Balay pc = rtmp + 49*row; 35149b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 35249b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 35349b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 35449b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 35549b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 35649b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 35749b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 35849b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 35949b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 36049b5e25fSSatish Balay p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39]; 36149b5e25fSSatish Balay p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43]; 36249b5e25fSSatish Balay p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47]; 36349b5e25fSSatish Balay p49 = pc[48]; 36449b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 36549b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 36649b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 36749b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 36849b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 36949b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 37049b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 37149b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 37249b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 || 37349b5e25fSSatish Balay p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 || 37449b5e25fSSatish Balay p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 || 37549b5e25fSSatish Balay p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 || 37649b5e25fSSatish Balay p49 != 0.0) { 37749b5e25fSSatish Balay pv = ba + 49*diag_offset[row]; 37849b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 37949b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 38049b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 38149b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 38249b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 38349b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 38449b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 38549b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 38649b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 38749b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 38849b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 38949b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 39049b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 39149b5e25fSSatish Balay x49 = pv[48]; 39249b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p8*x2 + p15*x3 + p22*x4 + p29*x5 + p36*x6 + p43*x7; 39349b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p9*x2 + p16*x3 + p23*x4 + p30*x5 + p37*x6 + p44*x7; 39449b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p10*x2 + p17*x3 + p24*x4 + p31*x5 + p38*x6 + p45*x7; 39549b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p11*x2 + p18*x3 + p25*x4 + p32*x5 + p39*x6 + p46*x7; 39649b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p12*x2 + p19*x3 + p26*x4 + p33*x5 + p40*x6 + p47*x7; 39749b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p13*x2 + p20*x3 + p27*x4 + p34*x5 + p41*x6 + p48*x7; 39849b5e25fSSatish Balay pc[6] = m7 = p7*x1 + p14*x2 + p21*x3 + p28*x4 + p35*x5 + p42*x6 + p49*x7; 39949b5e25fSSatish Balay 40049b5e25fSSatish Balay pc[7] = m8 = p1*x8 + p8*x9 + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14; 40149b5e25fSSatish Balay pc[8] = m9 = p2*x8 + p9*x9 + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14; 40249b5e25fSSatish Balay pc[9] = m10 = p3*x8 + p10*x9 + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14; 40349b5e25fSSatish Balay pc[10] = m11 = p4*x8 + p11*x9 + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14; 40449b5e25fSSatish Balay pc[11] = m12 = p5*x8 + p12*x9 + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14; 40549b5e25fSSatish Balay pc[12] = m13 = p6*x8 + p13*x9 + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14; 40649b5e25fSSatish Balay pc[13] = m14 = p7*x8 + p14*x9 + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14; 40749b5e25fSSatish Balay 40849b5e25fSSatish Balay pc[14] = m15 = p1*x15 + p8*x16 + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21; 40949b5e25fSSatish Balay pc[15] = m16 = p2*x15 + p9*x16 + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21; 41049b5e25fSSatish Balay pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21; 41149b5e25fSSatish Balay pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21; 41249b5e25fSSatish Balay pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21; 41349b5e25fSSatish Balay pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21; 41449b5e25fSSatish Balay pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21; 41549b5e25fSSatish Balay 41649b5e25fSSatish Balay pc[21] = m22 = p1*x22 + p8*x23 + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28; 41749b5e25fSSatish Balay pc[22] = m23 = p2*x22 + p9*x23 + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28; 41849b5e25fSSatish Balay pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28; 41949b5e25fSSatish Balay pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28; 42049b5e25fSSatish Balay pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28; 42149b5e25fSSatish Balay pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28; 42249b5e25fSSatish Balay pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28; 42349b5e25fSSatish Balay 42449b5e25fSSatish Balay pc[28] = m29 = p1*x29 + p8*x30 + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35; 42549b5e25fSSatish Balay pc[29] = m30 = p2*x29 + p9*x30 + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35; 42649b5e25fSSatish Balay pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35; 42749b5e25fSSatish Balay pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35; 42849b5e25fSSatish Balay pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35; 42949b5e25fSSatish Balay pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35; 43049b5e25fSSatish Balay pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35; 43149b5e25fSSatish Balay 43249b5e25fSSatish Balay pc[35] = m36 = p1*x36 + p8*x37 + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42; 43349b5e25fSSatish Balay pc[36] = m37 = p2*x36 + p9*x37 + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42; 43449b5e25fSSatish Balay pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42; 43549b5e25fSSatish Balay pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42; 43649b5e25fSSatish Balay pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42; 43749b5e25fSSatish Balay pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42; 43849b5e25fSSatish Balay pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42; 43949b5e25fSSatish Balay 44049b5e25fSSatish Balay pc[42] = m43 = p1*x43 + p8*x44 + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49; 44149b5e25fSSatish Balay pc[43] = m44 = p2*x43 + p9*x44 + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49; 44249b5e25fSSatish Balay pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49; 44349b5e25fSSatish Balay pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49; 44449b5e25fSSatish Balay pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49; 44549b5e25fSSatish Balay pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49; 44649b5e25fSSatish Balay pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49; 44749b5e25fSSatish Balay 44849b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 44949b5e25fSSatish Balay pv += 49; 45049b5e25fSSatish Balay for (j=0; j<nz; j++) { 45149b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 45249b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 45349b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 45449b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 45549b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 45649b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 45749b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 45849b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 45949b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 46049b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 46149b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 46249b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 46349b5e25fSSatish Balay x49 = pv[48]; 46449b5e25fSSatish Balay x = rtmp + 49*pj[j]; 46549b5e25fSSatish Balay x[0] -= m1*x1 + m8*x2 + m15*x3 + m22*x4 + m29*x5 + m36*x6 + m43*x7; 46649b5e25fSSatish Balay x[1] -= m2*x1 + m9*x2 + m16*x3 + m23*x4 + m30*x5 + m37*x6 + m44*x7; 46749b5e25fSSatish Balay x[2] -= m3*x1 + m10*x2 + m17*x3 + m24*x4 + m31*x5 + m38*x6 + m45*x7; 46849b5e25fSSatish Balay x[3] -= m4*x1 + m11*x2 + m18*x3 + m25*x4 + m32*x5 + m39*x6 + m46*x7; 46949b5e25fSSatish Balay x[4] -= m5*x1 + m12*x2 + m19*x3 + m26*x4 + m33*x5 + m40*x6 + m47*x7; 47049b5e25fSSatish Balay x[5] -= m6*x1 + m13*x2 + m20*x3 + m27*x4 + m34*x5 + m41*x6 + m48*x7; 47149b5e25fSSatish Balay x[6] -= m7*x1 + m14*x2 + m21*x3 + m28*x4 + m35*x5 + m42*x6 + m49*x7; 47249b5e25fSSatish Balay 47349b5e25fSSatish Balay x[7] -= m1*x8 + m8*x9 + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14; 47449b5e25fSSatish Balay x[8] -= m2*x8 + m9*x9 + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14; 47549b5e25fSSatish Balay x[9] -= m3*x8 + m10*x9 + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14; 47649b5e25fSSatish Balay x[10] -= m4*x8 + m11*x9 + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14; 47749b5e25fSSatish Balay x[11] -= m5*x8 + m12*x9 + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14; 47849b5e25fSSatish Balay x[12] -= m6*x8 + m13*x9 + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14; 47949b5e25fSSatish Balay x[13] -= m7*x8 + m14*x9 + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14; 48049b5e25fSSatish Balay 48149b5e25fSSatish Balay x[14] -= m1*x15 + m8*x16 + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21; 48249b5e25fSSatish Balay x[15] -= m2*x15 + m9*x16 + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21; 48349b5e25fSSatish Balay x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21; 48449b5e25fSSatish Balay x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21; 48549b5e25fSSatish Balay x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21; 48649b5e25fSSatish Balay x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21; 48749b5e25fSSatish Balay x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21; 48849b5e25fSSatish Balay 48949b5e25fSSatish Balay x[21] -= m1*x22 + m8*x23 + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28; 49049b5e25fSSatish Balay x[22] -= m2*x22 + m9*x23 + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28; 49149b5e25fSSatish Balay x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28; 49249b5e25fSSatish Balay x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28; 49349b5e25fSSatish Balay x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28; 49449b5e25fSSatish Balay x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28; 49549b5e25fSSatish Balay x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28; 49649b5e25fSSatish Balay 49749b5e25fSSatish Balay x[28] -= m1*x29 + m8*x30 + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35; 49849b5e25fSSatish Balay x[29] -= m2*x29 + m9*x30 + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35; 49949b5e25fSSatish Balay x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35; 50049b5e25fSSatish Balay x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35; 50149b5e25fSSatish Balay x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35; 50249b5e25fSSatish Balay x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35; 50349b5e25fSSatish Balay x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35; 50449b5e25fSSatish Balay 50549b5e25fSSatish Balay x[35] -= m1*x36 + m8*x37 + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42; 50649b5e25fSSatish Balay x[36] -= m2*x36 + m9*x37 + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42; 50749b5e25fSSatish Balay x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42; 50849b5e25fSSatish Balay x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42; 50949b5e25fSSatish Balay x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42; 51049b5e25fSSatish Balay x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42; 51149b5e25fSSatish Balay x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42; 51249b5e25fSSatish Balay 51349b5e25fSSatish Balay x[42] -= m1*x43 + m8*x44 + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49; 51449b5e25fSSatish Balay x[43] -= m2*x43 + m9*x44 + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49; 51549b5e25fSSatish Balay x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49; 51649b5e25fSSatish Balay x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49; 51749b5e25fSSatish Balay x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49; 51849b5e25fSSatish Balay x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49; 51949b5e25fSSatish Balay x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49; 52049b5e25fSSatish Balay pv += 49; 52149b5e25fSSatish Balay } 52249b5e25fSSatish Balay PLogFlops(686*nz+637); 52349b5e25fSSatish Balay } 52449b5e25fSSatish Balay row = *ajtmp++; 52549b5e25fSSatish Balay } 52649b5e25fSSatish Balay /* finished row so stick it into b->a */ 52749b5e25fSSatish Balay pv = ba + 49*bi[i]; 52849b5e25fSSatish Balay pj = bj + bi[i]; 52949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 53049b5e25fSSatish Balay for (j=0; j<nz; j++) { 53149b5e25fSSatish Balay x = rtmp+49*pj[j]; 53249b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 53349b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 53449b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 53549b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 53649b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 53749b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 53849b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 53949b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 54049b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 54149b5e25fSSatish Balay pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39]; 54249b5e25fSSatish Balay pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43]; 54349b5e25fSSatish Balay pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47]; 54449b5e25fSSatish Balay pv[48] = x[48]; 54549b5e25fSSatish Balay pv += 49; 54649b5e25fSSatish Balay } 54749b5e25fSSatish Balay /* invert diagonal block */ 54849b5e25fSSatish Balay w = ba + 49*diag_offset[i]; 54949b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr); 55049b5e25fSSatish Balay } 55149b5e25fSSatish Balay 55249b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 55349b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 55449b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 55549b5e25fSSatish Balay C->factor = FACTOR_LU; 55649b5e25fSSatish Balay C->assembled = PETSC_TRUE; 55749b5e25fSSatish Balay PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */ 55849b5e25fSSatish Balay PetscFunctionReturn(0); 55949b5e25fSSatish Balay } 56049b5e25fSSatish Balay 56149b5e25fSSatish Balay /* 56249b5e25fSSatish Balay Version for when blocks are 7 by 7 Using natural ordering 56349b5e25fSSatish Balay */ 56449b5e25fSSatish Balay #undef __FUNC__ 5656f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering" 5666f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering(Mat A,Mat *B) 56749b5e25fSSatish Balay { 56849b5e25fSSatish Balay Mat C = *B; 56949b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 57049b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 57149b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 57249b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 57349b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 57449b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 57549b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 57649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 57749b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 57849b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 57949b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 58049b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 58149b5e25fSSatish Balay MatScalar p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49; 58249b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 58349b5e25fSSatish Balay MatScalar x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49; 58449b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 58549b5e25fSSatish Balay MatScalar m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49; 58649b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 58749b5e25fSSatish Balay 58849b5e25fSSatish Balay PetscFunctionBegin; 58949b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 59049b5e25fSSatish Balay for (i=0; i<n; i++) { 59149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 59249b5e25fSSatish Balay ajtmp = bj + bi[i]; 59349b5e25fSSatish Balay for (j=0; j<nz; j++) { 59449b5e25fSSatish Balay x = rtmp+49*ajtmp[j]; 59549b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 59649b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 59749b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 59849b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 59949b5e25fSSatish Balay x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ; 60049b5e25fSSatish Balay x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ; 60149b5e25fSSatish Balay } 60249b5e25fSSatish Balay /* load in initial (unfactored row) */ 60349b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 60449b5e25fSSatish Balay ajtmpold = aj + ai[i]; 60549b5e25fSSatish Balay v = aa + 49*ai[i]; 60649b5e25fSSatish Balay for (j=0; j<nz; j++) { 60749b5e25fSSatish Balay x = rtmp+49*ajtmpold[j]; 60849b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 60949b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 61049b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 61149b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 61249b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 61349b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 61449b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 61549b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 61649b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 61749b5e25fSSatish Balay x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39]; 61849b5e25fSSatish Balay x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43]; 61949b5e25fSSatish Balay x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47]; 62049b5e25fSSatish Balay x[48] = v[48]; 62149b5e25fSSatish Balay v += 49; 62249b5e25fSSatish Balay } 62349b5e25fSSatish Balay row = *ajtmp++; 62449b5e25fSSatish Balay while (row < i) { 62549b5e25fSSatish Balay pc = rtmp + 49*row; 62649b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 62749b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 62849b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 62949b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 63049b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 63149b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 63249b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 63349b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 63449b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 63549b5e25fSSatish Balay p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39]; 63649b5e25fSSatish Balay p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43]; 63749b5e25fSSatish Balay p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47]; 63849b5e25fSSatish Balay p49 = pc[48]; 63949b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 64049b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 64149b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 64249b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 64349b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 64449b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 64549b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 64649b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 64749b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 || 64849b5e25fSSatish Balay p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 || 64949b5e25fSSatish Balay p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 || 65049b5e25fSSatish Balay p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 || 65149b5e25fSSatish Balay p49 != 0.0) { 65249b5e25fSSatish Balay pv = ba + 49*diag_offset[row]; 65349b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 65449b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 65549b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 65649b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 65749b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 65849b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 65949b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 66049b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 66149b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 66249b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 66349b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 66449b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 66549b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 66649b5e25fSSatish Balay x49 = pv[48]; 66749b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p8*x2 + p15*x3 + p22*x4 + p29*x5 + p36*x6 + p43*x7; 66849b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p9*x2 + p16*x3 + p23*x4 + p30*x5 + p37*x6 + p44*x7; 66949b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p10*x2 + p17*x3 + p24*x4 + p31*x5 + p38*x6 + p45*x7; 67049b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p11*x2 + p18*x3 + p25*x4 + p32*x5 + p39*x6 + p46*x7; 67149b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p12*x2 + p19*x3 + p26*x4 + p33*x5 + p40*x6 + p47*x7; 67249b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p13*x2 + p20*x3 + p27*x4 + p34*x5 + p41*x6 + p48*x7; 67349b5e25fSSatish Balay pc[6] = m7 = p7*x1 + p14*x2 + p21*x3 + p28*x4 + p35*x5 + p42*x6 + p49*x7; 67449b5e25fSSatish Balay 67549b5e25fSSatish Balay pc[7] = m8 = p1*x8 + p8*x9 + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14; 67649b5e25fSSatish Balay pc[8] = m9 = p2*x8 + p9*x9 + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14; 67749b5e25fSSatish Balay pc[9] = m10 = p3*x8 + p10*x9 + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14; 67849b5e25fSSatish Balay pc[10] = m11 = p4*x8 + p11*x9 + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14; 67949b5e25fSSatish Balay pc[11] = m12 = p5*x8 + p12*x9 + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14; 68049b5e25fSSatish Balay pc[12] = m13 = p6*x8 + p13*x9 + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14; 68149b5e25fSSatish Balay pc[13] = m14 = p7*x8 + p14*x9 + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14; 68249b5e25fSSatish Balay 68349b5e25fSSatish Balay pc[14] = m15 = p1*x15 + p8*x16 + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21; 68449b5e25fSSatish Balay pc[15] = m16 = p2*x15 + p9*x16 + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21; 68549b5e25fSSatish Balay pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21; 68649b5e25fSSatish Balay pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21; 68749b5e25fSSatish Balay pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21; 68849b5e25fSSatish Balay pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21; 68949b5e25fSSatish Balay pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21; 69049b5e25fSSatish Balay 69149b5e25fSSatish Balay pc[21] = m22 = p1*x22 + p8*x23 + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28; 69249b5e25fSSatish Balay pc[22] = m23 = p2*x22 + p9*x23 + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28; 69349b5e25fSSatish Balay pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28; 69449b5e25fSSatish Balay pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28; 69549b5e25fSSatish Balay pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28; 69649b5e25fSSatish Balay pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28; 69749b5e25fSSatish Balay pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28; 69849b5e25fSSatish Balay 69949b5e25fSSatish Balay pc[28] = m29 = p1*x29 + p8*x30 + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35; 70049b5e25fSSatish Balay pc[29] = m30 = p2*x29 + p9*x30 + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35; 70149b5e25fSSatish Balay pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35; 70249b5e25fSSatish Balay pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35; 70349b5e25fSSatish Balay pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35; 70449b5e25fSSatish Balay pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35; 70549b5e25fSSatish Balay pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35; 70649b5e25fSSatish Balay 70749b5e25fSSatish Balay pc[35] = m36 = p1*x36 + p8*x37 + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42; 70849b5e25fSSatish Balay pc[36] = m37 = p2*x36 + p9*x37 + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42; 70949b5e25fSSatish Balay pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42; 71049b5e25fSSatish Balay pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42; 71149b5e25fSSatish Balay pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42; 71249b5e25fSSatish Balay pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42; 71349b5e25fSSatish Balay pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42; 71449b5e25fSSatish Balay 71549b5e25fSSatish Balay pc[42] = m43 = p1*x43 + p8*x44 + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49; 71649b5e25fSSatish Balay pc[43] = m44 = p2*x43 + p9*x44 + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49; 71749b5e25fSSatish Balay pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49; 71849b5e25fSSatish Balay pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49; 71949b5e25fSSatish Balay pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49; 72049b5e25fSSatish Balay pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49; 72149b5e25fSSatish Balay pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49; 72249b5e25fSSatish Balay 72349b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 72449b5e25fSSatish Balay pv += 49; 72549b5e25fSSatish Balay for (j=0; j<nz; j++) { 72649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 72749b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 72849b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 72949b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 73049b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 73149b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 73249b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 73349b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 73449b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 73549b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 73649b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 73749b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 73849b5e25fSSatish Balay x49 = pv[48]; 73949b5e25fSSatish Balay x = rtmp + 49*pj[j]; 74049b5e25fSSatish Balay x[0] -= m1*x1 + m8*x2 + m15*x3 + m22*x4 + m29*x5 + m36*x6 + m43*x7; 74149b5e25fSSatish Balay x[1] -= m2*x1 + m9*x2 + m16*x3 + m23*x4 + m30*x5 + m37*x6 + m44*x7; 74249b5e25fSSatish Balay x[2] -= m3*x1 + m10*x2 + m17*x3 + m24*x4 + m31*x5 + m38*x6 + m45*x7; 74349b5e25fSSatish Balay x[3] -= m4*x1 + m11*x2 + m18*x3 + m25*x4 + m32*x5 + m39*x6 + m46*x7; 74449b5e25fSSatish Balay x[4] -= m5*x1 + m12*x2 + m19*x3 + m26*x4 + m33*x5 + m40*x6 + m47*x7; 74549b5e25fSSatish Balay x[5] -= m6*x1 + m13*x2 + m20*x3 + m27*x4 + m34*x5 + m41*x6 + m48*x7; 74649b5e25fSSatish Balay x[6] -= m7*x1 + m14*x2 + m21*x3 + m28*x4 + m35*x5 + m42*x6 + m49*x7; 74749b5e25fSSatish Balay 74849b5e25fSSatish Balay x[7] -= m1*x8 + m8*x9 + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14; 74949b5e25fSSatish Balay x[8] -= m2*x8 + m9*x9 + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14; 75049b5e25fSSatish Balay x[9] -= m3*x8 + m10*x9 + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14; 75149b5e25fSSatish Balay x[10] -= m4*x8 + m11*x9 + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14; 75249b5e25fSSatish Balay x[11] -= m5*x8 + m12*x9 + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14; 75349b5e25fSSatish Balay x[12] -= m6*x8 + m13*x9 + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14; 75449b5e25fSSatish Balay x[13] -= m7*x8 + m14*x9 + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14; 75549b5e25fSSatish Balay 75649b5e25fSSatish Balay x[14] -= m1*x15 + m8*x16 + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21; 75749b5e25fSSatish Balay x[15] -= m2*x15 + m9*x16 + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21; 75849b5e25fSSatish Balay x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21; 75949b5e25fSSatish Balay x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21; 76049b5e25fSSatish Balay x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21; 76149b5e25fSSatish Balay x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21; 76249b5e25fSSatish Balay x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21; 76349b5e25fSSatish Balay 76449b5e25fSSatish Balay x[21] -= m1*x22 + m8*x23 + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28; 76549b5e25fSSatish Balay x[22] -= m2*x22 + m9*x23 + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28; 76649b5e25fSSatish Balay x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28; 76749b5e25fSSatish Balay x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28; 76849b5e25fSSatish Balay x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28; 76949b5e25fSSatish Balay x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28; 77049b5e25fSSatish Balay x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28; 77149b5e25fSSatish Balay 77249b5e25fSSatish Balay x[28] -= m1*x29 + m8*x30 + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35; 77349b5e25fSSatish Balay x[29] -= m2*x29 + m9*x30 + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35; 77449b5e25fSSatish Balay x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35; 77549b5e25fSSatish Balay x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35; 77649b5e25fSSatish Balay x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35; 77749b5e25fSSatish Balay x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35; 77849b5e25fSSatish Balay x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35; 77949b5e25fSSatish Balay 78049b5e25fSSatish Balay x[35] -= m1*x36 + m8*x37 + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42; 78149b5e25fSSatish Balay x[36] -= m2*x36 + m9*x37 + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42; 78249b5e25fSSatish Balay x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42; 78349b5e25fSSatish Balay x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42; 78449b5e25fSSatish Balay x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42; 78549b5e25fSSatish Balay x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42; 78649b5e25fSSatish Balay x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42; 78749b5e25fSSatish Balay 78849b5e25fSSatish Balay x[42] -= m1*x43 + m8*x44 + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49; 78949b5e25fSSatish Balay x[43] -= m2*x43 + m9*x44 + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49; 79049b5e25fSSatish Balay x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49; 79149b5e25fSSatish Balay x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49; 79249b5e25fSSatish Balay x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49; 79349b5e25fSSatish Balay x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49; 79449b5e25fSSatish Balay x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49; 79549b5e25fSSatish Balay pv += 49; 79649b5e25fSSatish Balay } 79749b5e25fSSatish Balay PLogFlops(686*nz+637); 79849b5e25fSSatish Balay } 79949b5e25fSSatish Balay row = *ajtmp++; 80049b5e25fSSatish Balay } 80149b5e25fSSatish Balay /* finished row so stick it into b->a */ 80249b5e25fSSatish Balay pv = ba + 49*bi[i]; 80349b5e25fSSatish Balay pj = bj + bi[i]; 80449b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 80549b5e25fSSatish Balay for (j=0; j<nz; j++) { 80649b5e25fSSatish Balay x = rtmp+49*pj[j]; 80749b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 80849b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 80949b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 81049b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 81149b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 81249b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 81349b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 81449b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 81549b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 81649b5e25fSSatish Balay pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39]; 81749b5e25fSSatish Balay pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43]; 81849b5e25fSSatish Balay pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47]; 81949b5e25fSSatish Balay pv[48] = x[48]; 82049b5e25fSSatish Balay pv += 49; 82149b5e25fSSatish Balay } 82249b5e25fSSatish Balay /* invert diagonal block */ 82349b5e25fSSatish Balay w = ba + 49*diag_offset[i]; 82449b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr); 82549b5e25fSSatish Balay } 82649b5e25fSSatish Balay 82749b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 82849b5e25fSSatish Balay C->factor = FACTOR_LU; 82949b5e25fSSatish Balay C->assembled = PETSC_TRUE; 83049b5e25fSSatish Balay PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */ 83149b5e25fSSatish Balay PetscFunctionReturn(0); 83249b5e25fSSatish Balay } 83349b5e25fSSatish Balay 83449b5e25fSSatish Balay /* ------------------------------------------------------------*/ 83549b5e25fSSatish Balay /* 83649b5e25fSSatish Balay Version for when blocks are 6 by 6 83749b5e25fSSatish Balay */ 83849b5e25fSSatish Balay #undef __FUNC__ 8396f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6" 8406f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6(Mat A,Mat *B) 84149b5e25fSSatish Balay { 84249b5e25fSSatish Balay Mat C = *B; 84349b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 84449b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 84549b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 84649b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 84749b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 84849b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 84949b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 85049b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 85149b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 85249b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 85349b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 85449b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 85549b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 85649b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 85749b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 85849b5e25fSSatish Balay 85949b5e25fSSatish Balay PetscFunctionBegin; 86049b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 86149b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 86249b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 86349b5e25fSSatish Balay 86449b5e25fSSatish Balay for (i=0; i<n; i++) { 86549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 86649b5e25fSSatish Balay ajtmp = bj + bi[i]; 86749b5e25fSSatish Balay for (j=0; j<nz; j++) { 86849b5e25fSSatish Balay x = rtmp+36*ajtmp[j]; 86949b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 87049b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 87149b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 87249b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 87349b5e25fSSatish Balay x[34] = x[35] = 0.0 ; 87449b5e25fSSatish Balay } 87549b5e25fSSatish Balay /* load in initial (unfactored row) */ 87649b5e25fSSatish Balay idx = r[i]; 87749b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 87849b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 87949b5e25fSSatish Balay v = aa + 36*ai[idx]; 88049b5e25fSSatish Balay for (j=0; j<nz; j++) { 88149b5e25fSSatish Balay x = rtmp+36*ic[ajtmpold[j]]; 88249b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 88349b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 88449b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 88549b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 88649b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 88749b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 88849b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 88949b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 89049b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 89149b5e25fSSatish Balay v += 36; 89249b5e25fSSatish Balay } 89349b5e25fSSatish Balay row = *ajtmp++; 89449b5e25fSSatish Balay while (row < i) { 89549b5e25fSSatish Balay pc = rtmp + 36*row; 89649b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 89749b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 89849b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 89949b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 90049b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 90149b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 90249b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 90349b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 90449b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 90549b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 90649b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 90749b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 90849b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 90949b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 91049b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 91149b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 91249b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 91349b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) { 91449b5e25fSSatish Balay pv = ba + 36*diag_offset[row]; 91549b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 91649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 91749b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 91849b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 91949b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 92049b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 92149b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 92249b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 92349b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 92449b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 92549b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p7*x2 + p13*x3 + p19*x4 + p25*x5 + p31*x6; 92649b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p8*x2 + p14*x3 + p20*x4 + p26*x5 + p32*x6; 92749b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p9*x2 + p15*x3 + p21*x4 + p27*x5 + p33*x6; 92849b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p10*x2 + p16*x3 + p22*x4 + p28*x5 + p34*x6; 92949b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p11*x2 + p17*x3 + p23*x4 + p29*x5 + p35*x6; 93049b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p12*x2 + p18*x3 + p24*x4 + p30*x5 + p36*x6; 93149b5e25fSSatish Balay 93249b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p7*x8 + p13*x9 + p19*x10 + p25*x11 + p31*x12; 93349b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p8*x8 + p14*x9 + p20*x10 + p26*x11 + p32*x12; 93449b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p9*x8 + p15*x9 + p21*x10 + p27*x11 + p33*x12; 93549b5e25fSSatish Balay pc[9] = m10 = p4*x7 + p10*x8 + p16*x9 + p22*x10 + p28*x11 + p34*x12; 93649b5e25fSSatish Balay pc[10] = m11 = p5*x7 + p11*x8 + p17*x9 + p23*x10 + p29*x11 + p35*x12; 93749b5e25fSSatish Balay pc[11] = m12 = p6*x7 + p12*x8 + p18*x9 + p24*x10 + p30*x11 + p36*x12; 93849b5e25fSSatish Balay 93949b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p7*x14 + p13*x15 + p19*x16 + p25*x17 + p31*x18; 94049b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p8*x14 + p14*x15 + p20*x16 + p26*x17 + p32*x18; 94149b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p9*x14 + p15*x15 + p21*x16 + p27*x17 + p33*x18; 94249b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18; 94349b5e25fSSatish Balay pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18; 94449b5e25fSSatish Balay pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18; 94549b5e25fSSatish Balay 94649b5e25fSSatish Balay pc[18] = m19 = p1*x19 + p7*x20 + p13*x21 + p19*x22 + p25*x23 + p31*x24; 94749b5e25fSSatish Balay pc[19] = m20 = p2*x19 + p8*x20 + p14*x21 + p20*x22 + p26*x23 + p32*x24; 94849b5e25fSSatish Balay pc[20] = m21 = p3*x19 + p9*x20 + p15*x21 + p21*x22 + p27*x23 + p33*x24; 94949b5e25fSSatish Balay pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24; 95049b5e25fSSatish Balay pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24; 95149b5e25fSSatish Balay pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24; 95249b5e25fSSatish Balay 95349b5e25fSSatish Balay pc[24] = m25 = p1*x25 + p7*x26 + p13*x27 + p19*x28 + p25*x29 + p31*x30; 95449b5e25fSSatish Balay pc[25] = m26 = p2*x25 + p8*x26 + p14*x27 + p20*x28 + p26*x29 + p32*x30; 95549b5e25fSSatish Balay pc[26] = m27 = p3*x25 + p9*x26 + p15*x27 + p21*x28 + p27*x29 + p33*x30; 95649b5e25fSSatish Balay pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30; 95749b5e25fSSatish Balay pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30; 95849b5e25fSSatish Balay pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30; 95949b5e25fSSatish Balay 96049b5e25fSSatish Balay pc[30] = m31 = p1*x31 + p7*x32 + p13*x33 + p19*x34 + p25*x35 + p31*x36; 96149b5e25fSSatish Balay pc[31] = m32 = p2*x31 + p8*x32 + p14*x33 + p20*x34 + p26*x35 + p32*x36; 96249b5e25fSSatish Balay pc[32] = m33 = p3*x31 + p9*x32 + p15*x33 + p21*x34 + p27*x35 + p33*x36; 96349b5e25fSSatish Balay pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36; 96449b5e25fSSatish Balay pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36; 96549b5e25fSSatish Balay pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36; 96649b5e25fSSatish Balay 96749b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 96849b5e25fSSatish Balay pv += 36; 96949b5e25fSSatish Balay for (j=0; j<nz; j++) { 97049b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 97149b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 97249b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 97349b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 97449b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 97549b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 97649b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 97749b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 97849b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 97949b5e25fSSatish Balay x = rtmp + 36*pj[j]; 98049b5e25fSSatish Balay x[0] -= m1*x1 + m7*x2 + m13*x3 + m19*x4 + m25*x5 + m31*x6; 98149b5e25fSSatish Balay x[1] -= m2*x1 + m8*x2 + m14*x3 + m20*x4 + m26*x5 + m32*x6; 98249b5e25fSSatish Balay x[2] -= m3*x1 + m9*x2 + m15*x3 + m21*x4 + m27*x5 + m33*x6; 98349b5e25fSSatish Balay x[3] -= m4*x1 + m10*x2 + m16*x3 + m22*x4 + m28*x5 + m34*x6; 98449b5e25fSSatish Balay x[4] -= m5*x1 + m11*x2 + m17*x3 + m23*x4 + m29*x5 + m35*x6; 98549b5e25fSSatish Balay x[5] -= m6*x1 + m12*x2 + m18*x3 + m24*x4 + m30*x5 + m36*x6; 98649b5e25fSSatish Balay 98749b5e25fSSatish Balay x[6] -= m1*x7 + m7*x8 + m13*x9 + m19*x10 + m25*x11 + m31*x12; 98849b5e25fSSatish Balay x[7] -= m2*x7 + m8*x8 + m14*x9 + m20*x10 + m26*x11 + m32*x12; 98949b5e25fSSatish Balay x[8] -= m3*x7 + m9*x8 + m15*x9 + m21*x10 + m27*x11 + m33*x12; 99049b5e25fSSatish Balay x[9] -= m4*x7 + m10*x8 + m16*x9 + m22*x10 + m28*x11 + m34*x12; 99149b5e25fSSatish Balay x[10] -= m5*x7 + m11*x8 + m17*x9 + m23*x10 + m29*x11 + m35*x12; 99249b5e25fSSatish Balay x[11] -= m6*x7 + m12*x8 + m18*x9 + m24*x10 + m30*x11 + m36*x12; 99349b5e25fSSatish Balay 99449b5e25fSSatish Balay x[12] -= m1*x13 + m7*x14 + m13*x15 + m19*x16 + m25*x17 + m31*x18; 99549b5e25fSSatish Balay x[13] -= m2*x13 + m8*x14 + m14*x15 + m20*x16 + m26*x17 + m32*x18; 99649b5e25fSSatish Balay x[14] -= m3*x13 + m9*x14 + m15*x15 + m21*x16 + m27*x17 + m33*x18; 99749b5e25fSSatish Balay x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18; 99849b5e25fSSatish Balay x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18; 99949b5e25fSSatish Balay x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18; 100049b5e25fSSatish Balay 100149b5e25fSSatish Balay x[18] -= m1*x19 + m7*x20 + m13*x21 + m19*x22 + m25*x23 + m31*x24; 100249b5e25fSSatish Balay x[19] -= m2*x19 + m8*x20 + m14*x21 + m20*x22 + m26*x23 + m32*x24; 100349b5e25fSSatish Balay x[20] -= m3*x19 + m9*x20 + m15*x21 + m21*x22 + m27*x23 + m33*x24; 100449b5e25fSSatish Balay x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24; 100549b5e25fSSatish Balay x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24; 100649b5e25fSSatish Balay x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24; 100749b5e25fSSatish Balay 100849b5e25fSSatish Balay x[24] -= m1*x25 + m7*x26 + m13*x27 + m19*x28 + m25*x29 + m31*x30; 100949b5e25fSSatish Balay x[25] -= m2*x25 + m8*x26 + m14*x27 + m20*x28 + m26*x29 + m32*x30; 101049b5e25fSSatish Balay x[26] -= m3*x25 + m9*x26 + m15*x27 + m21*x28 + m27*x29 + m33*x30; 101149b5e25fSSatish Balay x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30; 101249b5e25fSSatish Balay x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30; 101349b5e25fSSatish Balay x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30; 101449b5e25fSSatish Balay 101549b5e25fSSatish Balay x[30] -= m1*x31 + m7*x32 + m13*x33 + m19*x34 + m25*x35 + m31*x36; 101649b5e25fSSatish Balay x[31] -= m2*x31 + m8*x32 + m14*x33 + m20*x34 + m26*x35 + m32*x36; 101749b5e25fSSatish Balay x[32] -= m3*x31 + m9*x32 + m15*x33 + m21*x34 + m27*x35 + m33*x36; 101849b5e25fSSatish Balay x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36; 101949b5e25fSSatish Balay x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36; 102049b5e25fSSatish Balay x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36; 102149b5e25fSSatish Balay 102249b5e25fSSatish Balay pv += 36; 102349b5e25fSSatish Balay } 102449b5e25fSSatish Balay PLogFlops(432*nz+396); 102549b5e25fSSatish Balay } 102649b5e25fSSatish Balay row = *ajtmp++; 102749b5e25fSSatish Balay } 102849b5e25fSSatish Balay /* finished row so stick it into b->a */ 102949b5e25fSSatish Balay pv = ba + 36*bi[i]; 103049b5e25fSSatish Balay pj = bj + bi[i]; 103149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 103249b5e25fSSatish Balay for (j=0; j<nz; j++) { 103349b5e25fSSatish Balay x = rtmp+36*pj[j]; 103449b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 103549b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 103649b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 103749b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 103849b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 103949b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 104049b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 104149b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 104249b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 104349b5e25fSSatish Balay pv += 36; 104449b5e25fSSatish Balay } 104549b5e25fSSatish Balay /* invert diagonal block */ 104649b5e25fSSatish Balay w = ba + 36*diag_offset[i]; 104749b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr); 104849b5e25fSSatish Balay } 104949b5e25fSSatish Balay 105049b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 105149b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 105249b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 105349b5e25fSSatish Balay C->factor = FACTOR_LU; 105449b5e25fSSatish Balay C->assembled = PETSC_TRUE; 105549b5e25fSSatish Balay PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */ 105649b5e25fSSatish Balay PetscFunctionReturn(0); 105749b5e25fSSatish Balay } 105849b5e25fSSatish Balay /* 105949b5e25fSSatish Balay Version for when blocks are 6 by 6 Using natural ordering 106049b5e25fSSatish Balay */ 106149b5e25fSSatish Balay #undef __FUNC__ 10626f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering" 10636f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering(Mat A,Mat *B) 106449b5e25fSSatish Balay { 106549b5e25fSSatish Balay Mat C = *B; 106649b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 106749b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 106849b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 106949b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 107049b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 107149b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 107249b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 107349b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 107449b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 107549b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 107649b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 107749b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 107849b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 107949b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 108049b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 108149b5e25fSSatish Balay 108249b5e25fSSatish Balay PetscFunctionBegin; 108349b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 108449b5e25fSSatish Balay for (i=0; i<n; i++) { 108549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 108649b5e25fSSatish Balay ajtmp = bj + bi[i]; 108749b5e25fSSatish Balay for (j=0; j<nz; j++) { 108849b5e25fSSatish Balay x = rtmp+36*ajtmp[j]; 108949b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 109049b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 109149b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 109249b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 109349b5e25fSSatish Balay x[34] = x[35] = 0.0 ; 109449b5e25fSSatish Balay } 109549b5e25fSSatish Balay /* load in initial (unfactored row) */ 109649b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 109749b5e25fSSatish Balay ajtmpold = aj + ai[i]; 109849b5e25fSSatish Balay v = aa + 36*ai[i]; 109949b5e25fSSatish Balay for (j=0; j<nz; j++) { 110049b5e25fSSatish Balay x = rtmp+36*ajtmpold[j]; 110149b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 110249b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 110349b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 110449b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 110549b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 110649b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 110749b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 110849b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 110949b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 111049b5e25fSSatish Balay v += 36; 111149b5e25fSSatish Balay } 111249b5e25fSSatish Balay row = *ajtmp++; 111349b5e25fSSatish Balay while (row < i) { 111449b5e25fSSatish Balay pc = rtmp + 36*row; 111549b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 111649b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 111749b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 111849b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 111949b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 112049b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 112149b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 112249b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 112349b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 112449b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 112549b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 112649b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 112749b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 112849b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 112949b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 113049b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 113149b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 113249b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) { 113349b5e25fSSatish Balay pv = ba + 36*diag_offset[row]; 113449b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 113549b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 113649b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 113749b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 113849b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 113949b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 114049b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 114149b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 114249b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 114349b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 114449b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p7*x2 + p13*x3 + p19*x4 + p25*x5 + p31*x6; 114549b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p8*x2 + p14*x3 + p20*x4 + p26*x5 + p32*x6; 114649b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p9*x2 + p15*x3 + p21*x4 + p27*x5 + p33*x6; 114749b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p10*x2 + p16*x3 + p22*x4 + p28*x5 + p34*x6; 114849b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p11*x2 + p17*x3 + p23*x4 + p29*x5 + p35*x6; 114949b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p12*x2 + p18*x3 + p24*x4 + p30*x5 + p36*x6; 115049b5e25fSSatish Balay 115149b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p7*x8 + p13*x9 + p19*x10 + p25*x11 + p31*x12; 115249b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p8*x8 + p14*x9 + p20*x10 + p26*x11 + p32*x12; 115349b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p9*x8 + p15*x9 + p21*x10 + p27*x11 + p33*x12; 115449b5e25fSSatish Balay pc[9] = m10 = p4*x7 + p10*x8 + p16*x9 + p22*x10 + p28*x11 + p34*x12; 115549b5e25fSSatish Balay pc[10] = m11 = p5*x7 + p11*x8 + p17*x9 + p23*x10 + p29*x11 + p35*x12; 115649b5e25fSSatish Balay pc[11] = m12 = p6*x7 + p12*x8 + p18*x9 + p24*x10 + p30*x11 + p36*x12; 115749b5e25fSSatish Balay 115849b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p7*x14 + p13*x15 + p19*x16 + p25*x17 + p31*x18; 115949b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p8*x14 + p14*x15 + p20*x16 + p26*x17 + p32*x18; 116049b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p9*x14 + p15*x15 + p21*x16 + p27*x17 + p33*x18; 116149b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18; 116249b5e25fSSatish Balay pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18; 116349b5e25fSSatish Balay pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18; 116449b5e25fSSatish Balay 116549b5e25fSSatish Balay pc[18] = m19 = p1*x19 + p7*x20 + p13*x21 + p19*x22 + p25*x23 + p31*x24; 116649b5e25fSSatish Balay pc[19] = m20 = p2*x19 + p8*x20 + p14*x21 + p20*x22 + p26*x23 + p32*x24; 116749b5e25fSSatish Balay pc[20] = m21 = p3*x19 + p9*x20 + p15*x21 + p21*x22 + p27*x23 + p33*x24; 116849b5e25fSSatish Balay pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24; 116949b5e25fSSatish Balay pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24; 117049b5e25fSSatish Balay pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24; 117149b5e25fSSatish Balay 117249b5e25fSSatish Balay pc[24] = m25 = p1*x25 + p7*x26 + p13*x27 + p19*x28 + p25*x29 + p31*x30; 117349b5e25fSSatish Balay pc[25] = m26 = p2*x25 + p8*x26 + p14*x27 + p20*x28 + p26*x29 + p32*x30; 117449b5e25fSSatish Balay pc[26] = m27 = p3*x25 + p9*x26 + p15*x27 + p21*x28 + p27*x29 + p33*x30; 117549b5e25fSSatish Balay pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30; 117649b5e25fSSatish Balay pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30; 117749b5e25fSSatish Balay pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30; 117849b5e25fSSatish Balay 117949b5e25fSSatish Balay pc[30] = m31 = p1*x31 + p7*x32 + p13*x33 + p19*x34 + p25*x35 + p31*x36; 118049b5e25fSSatish Balay pc[31] = m32 = p2*x31 + p8*x32 + p14*x33 + p20*x34 + p26*x35 + p32*x36; 118149b5e25fSSatish Balay pc[32] = m33 = p3*x31 + p9*x32 + p15*x33 + p21*x34 + p27*x35 + p33*x36; 118249b5e25fSSatish Balay pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36; 118349b5e25fSSatish Balay pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36; 118449b5e25fSSatish Balay pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36; 118549b5e25fSSatish Balay 118649b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 118749b5e25fSSatish Balay pv += 36; 118849b5e25fSSatish Balay for (j=0; j<nz; j++) { 118949b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 119049b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 119149b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 119249b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 119349b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 119449b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 119549b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 119649b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 119749b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 119849b5e25fSSatish Balay x = rtmp + 36*pj[j]; 119949b5e25fSSatish Balay x[0] -= m1*x1 + m7*x2 + m13*x3 + m19*x4 + m25*x5 + m31*x6; 120049b5e25fSSatish Balay x[1] -= m2*x1 + m8*x2 + m14*x3 + m20*x4 + m26*x5 + m32*x6; 120149b5e25fSSatish Balay x[2] -= m3*x1 + m9*x2 + m15*x3 + m21*x4 + m27*x5 + m33*x6; 120249b5e25fSSatish Balay x[3] -= m4*x1 + m10*x2 + m16*x3 + m22*x4 + m28*x5 + m34*x6; 120349b5e25fSSatish Balay x[4] -= m5*x1 + m11*x2 + m17*x3 + m23*x4 + m29*x5 + m35*x6; 120449b5e25fSSatish Balay x[5] -= m6*x1 + m12*x2 + m18*x3 + m24*x4 + m30*x5 + m36*x6; 120549b5e25fSSatish Balay 120649b5e25fSSatish Balay x[6] -= m1*x7 + m7*x8 + m13*x9 + m19*x10 + m25*x11 + m31*x12; 120749b5e25fSSatish Balay x[7] -= m2*x7 + m8*x8 + m14*x9 + m20*x10 + m26*x11 + m32*x12; 120849b5e25fSSatish Balay x[8] -= m3*x7 + m9*x8 + m15*x9 + m21*x10 + m27*x11 + m33*x12; 120949b5e25fSSatish Balay x[9] -= m4*x7 + m10*x8 + m16*x9 + m22*x10 + m28*x11 + m34*x12; 121049b5e25fSSatish Balay x[10] -= m5*x7 + m11*x8 + m17*x9 + m23*x10 + m29*x11 + m35*x12; 121149b5e25fSSatish Balay x[11] -= m6*x7 + m12*x8 + m18*x9 + m24*x10 + m30*x11 + m36*x12; 121249b5e25fSSatish Balay 121349b5e25fSSatish Balay x[12] -= m1*x13 + m7*x14 + m13*x15 + m19*x16 + m25*x17 + m31*x18; 121449b5e25fSSatish Balay x[13] -= m2*x13 + m8*x14 + m14*x15 + m20*x16 + m26*x17 + m32*x18; 121549b5e25fSSatish Balay x[14] -= m3*x13 + m9*x14 + m15*x15 + m21*x16 + m27*x17 + m33*x18; 121649b5e25fSSatish Balay x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18; 121749b5e25fSSatish Balay x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18; 121849b5e25fSSatish Balay x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18; 121949b5e25fSSatish Balay 122049b5e25fSSatish Balay x[18] -= m1*x19 + m7*x20 + m13*x21 + m19*x22 + m25*x23 + m31*x24; 122149b5e25fSSatish Balay x[19] -= m2*x19 + m8*x20 + m14*x21 + m20*x22 + m26*x23 + m32*x24; 122249b5e25fSSatish Balay x[20] -= m3*x19 + m9*x20 + m15*x21 + m21*x22 + m27*x23 + m33*x24; 122349b5e25fSSatish Balay x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24; 122449b5e25fSSatish Balay x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24; 122549b5e25fSSatish Balay x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24; 122649b5e25fSSatish Balay 122749b5e25fSSatish Balay x[24] -= m1*x25 + m7*x26 + m13*x27 + m19*x28 + m25*x29 + m31*x30; 122849b5e25fSSatish Balay x[25] -= m2*x25 + m8*x26 + m14*x27 + m20*x28 + m26*x29 + m32*x30; 122949b5e25fSSatish Balay x[26] -= m3*x25 + m9*x26 + m15*x27 + m21*x28 + m27*x29 + m33*x30; 123049b5e25fSSatish Balay x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30; 123149b5e25fSSatish Balay x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30; 123249b5e25fSSatish Balay x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30; 123349b5e25fSSatish Balay 123449b5e25fSSatish Balay x[30] -= m1*x31 + m7*x32 + m13*x33 + m19*x34 + m25*x35 + m31*x36; 123549b5e25fSSatish Balay x[31] -= m2*x31 + m8*x32 + m14*x33 + m20*x34 + m26*x35 + m32*x36; 123649b5e25fSSatish Balay x[32] -= m3*x31 + m9*x32 + m15*x33 + m21*x34 + m27*x35 + m33*x36; 123749b5e25fSSatish Balay x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36; 123849b5e25fSSatish Balay x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36; 123949b5e25fSSatish Balay x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36; 124049b5e25fSSatish Balay 124149b5e25fSSatish Balay pv += 36; 124249b5e25fSSatish Balay } 124349b5e25fSSatish Balay PLogFlops(432*nz+396); 124449b5e25fSSatish Balay } 124549b5e25fSSatish Balay row = *ajtmp++; 124649b5e25fSSatish Balay } 124749b5e25fSSatish Balay /* finished row so stick it into b->a */ 124849b5e25fSSatish Balay pv = ba + 36*bi[i]; 124949b5e25fSSatish Balay pj = bj + bi[i]; 125049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 125149b5e25fSSatish Balay for (j=0; j<nz; j++) { 125249b5e25fSSatish Balay x = rtmp+36*pj[j]; 125349b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 125449b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 125549b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 125649b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 125749b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 125849b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 125949b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 126049b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 126149b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 126249b5e25fSSatish Balay pv += 36; 126349b5e25fSSatish Balay } 126449b5e25fSSatish Balay /* invert diagonal block */ 126549b5e25fSSatish Balay w = ba + 36*diag_offset[i]; 126649b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr); 126749b5e25fSSatish Balay } 126849b5e25fSSatish Balay 126949b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 127049b5e25fSSatish Balay C->factor = FACTOR_LU; 127149b5e25fSSatish Balay C->assembled = PETSC_TRUE; 127249b5e25fSSatish Balay PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */ 127349b5e25fSSatish Balay PetscFunctionReturn(0); 127449b5e25fSSatish Balay } 127549b5e25fSSatish Balay 127649b5e25fSSatish Balay /* 127749b5e25fSSatish Balay Version for when blocks are 5 by 5 127849b5e25fSSatish Balay */ 127949b5e25fSSatish Balay #undef __FUNC__ 12806f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5" 12816f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat A,Mat *B) 128249b5e25fSSatish Balay { 128349b5e25fSSatish Balay Mat C = *B; 128449b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 128549b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 128649b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 128749b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 128849b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 128949b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 129049b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 129149b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 129249b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 129349b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 129449b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 129549b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 129649b5e25fSSatish Balay 129749b5e25fSSatish Balay PetscFunctionBegin; 129849b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 129949b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 130049b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 130149b5e25fSSatish Balay 130249b5e25fSSatish Balay for (i=0; i<n; i++) { 130349b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 130449b5e25fSSatish Balay ajtmp = bj + bi[i]; 130549b5e25fSSatish Balay for (j=0; j<nz; j++) { 130649b5e25fSSatish Balay x = rtmp+25*ajtmp[j]; 130749b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 130849b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 130949b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0; 131049b5e25fSSatish Balay } 131149b5e25fSSatish Balay /* load in initial (unfactored row) */ 131249b5e25fSSatish Balay idx = r[i]; 131349b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 131449b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 131549b5e25fSSatish Balay v = aa + 25*ai[idx]; 131649b5e25fSSatish Balay for (j=0; j<nz; j++) { 131749b5e25fSSatish Balay x = rtmp+25*ic[ajtmpold[j]]; 131849b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 131949b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 132049b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 132149b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17]; 132249b5e25fSSatish Balay x[18] = v[18]; x[19] = v[19]; x[20] = v[20]; x[21] = v[21]; 132349b5e25fSSatish Balay x[22] = v[22]; x[23] = v[23]; x[24] = v[24]; 132449b5e25fSSatish Balay v += 25; 132549b5e25fSSatish Balay } 132649b5e25fSSatish Balay row = *ajtmp++; 132749b5e25fSSatish Balay while (row < i) { 132849b5e25fSSatish Balay pc = rtmp + 25*row; 132949b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 133049b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 133149b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 133249b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; 133349b5e25fSSatish Balay p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 133449b5e25fSSatish Balay p25 = pc[24]; 133549b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 133649b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 133749b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 133849b5e25fSSatish Balay || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || 133949b5e25fSSatish Balay p20 != 0.0 || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || 134049b5e25fSSatish Balay p24 != 0.0 || p25 != 0.0) { 134149b5e25fSSatish Balay pv = ba + 25*diag_offset[row]; 134249b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 134349b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 134449b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 134549b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 134649b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; 134749b5e25fSSatish Balay x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; 134849b5e25fSSatish Balay x23 = pv[22]; x24 = pv[23]; x25 = pv[24]; 134949b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p6*x2 + p11*x3 + p16*x4 + p21*x5; 135049b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p7*x2 + p12*x3 + p17*x4 + p22*x5; 135149b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p8*x2 + p13*x3 + p18*x4 + p23*x5; 135249b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p9*x2 + p14*x3 + p19*x4 + p24*x5; 135349b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5; 135449b5e25fSSatish Balay 135549b5e25fSSatish Balay pc[5] = m6 = p1*x6 + p6*x7 + p11*x8 + p16*x9 + p21*x10; 135649b5e25fSSatish Balay pc[6] = m7 = p2*x6 + p7*x7 + p12*x8 + p17*x9 + p22*x10; 135749b5e25fSSatish Balay pc[7] = m8 = p3*x6 + p8*x7 + p13*x8 + p18*x9 + p23*x10; 135849b5e25fSSatish Balay pc[8] = m9 = p4*x6 + p9*x7 + p14*x8 + p19*x9 + p24*x10; 135949b5e25fSSatish Balay pc[9] = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10; 136049b5e25fSSatish Balay 136149b5e25fSSatish Balay pc[10] = m11 = p1*x11 + p6*x12 + p11*x13 + p16*x14 + p21*x15; 136249b5e25fSSatish Balay pc[11] = m12 = p2*x11 + p7*x12 + p12*x13 + p17*x14 + p22*x15; 136349b5e25fSSatish Balay pc[12] = m13 = p3*x11 + p8*x12 + p13*x13 + p18*x14 + p23*x15; 136449b5e25fSSatish Balay pc[13] = m14 = p4*x11 + p9*x12 + p14*x13 + p19*x14 + p24*x15; 136549b5e25fSSatish Balay pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15; 136649b5e25fSSatish Balay 136749b5e25fSSatish Balay pc[15] = m16 = p1*x16 + p6*x17 + p11*x18 + p16*x19 + p21*x20; 136849b5e25fSSatish Balay pc[16] = m17 = p2*x16 + p7*x17 + p12*x18 + p17*x19 + p22*x20; 136949b5e25fSSatish Balay pc[17] = m18 = p3*x16 + p8*x17 + p13*x18 + p18*x19 + p23*x20; 137049b5e25fSSatish Balay pc[18] = m19 = p4*x16 + p9*x17 + p14*x18 + p19*x19 + p24*x20; 137149b5e25fSSatish Balay pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20; 137249b5e25fSSatish Balay 137349b5e25fSSatish Balay pc[20] = m21 = p1*x21 + p6*x22 + p11*x23 + p16*x24 + p21*x25; 137449b5e25fSSatish Balay pc[21] = m22 = p2*x21 + p7*x22 + p12*x23 + p17*x24 + p22*x25; 137549b5e25fSSatish Balay pc[22] = m23 = p3*x21 + p8*x22 + p13*x23 + p18*x24 + p23*x25; 137649b5e25fSSatish Balay pc[23] = m24 = p4*x21 + p9*x22 + p14*x23 + p19*x24 + p24*x25; 137749b5e25fSSatish Balay pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25; 137849b5e25fSSatish Balay 137949b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 138049b5e25fSSatish Balay pv += 25; 138149b5e25fSSatish Balay for (j=0; j<nz; j++) { 138249b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 138349b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 138449b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 138549b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; 138649b5e25fSSatish Balay x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; 138749b5e25fSSatish Balay x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; x25 = pv[24]; 138849b5e25fSSatish Balay x = rtmp + 25*pj[j]; 138949b5e25fSSatish Balay x[0] -= m1*x1 + m6*x2 + m11*x3 + m16*x4 + m21*x5; 139049b5e25fSSatish Balay x[1] -= m2*x1 + m7*x2 + m12*x3 + m17*x4 + m22*x5; 139149b5e25fSSatish Balay x[2] -= m3*x1 + m8*x2 + m13*x3 + m18*x4 + m23*x5; 139249b5e25fSSatish Balay x[3] -= m4*x1 + m9*x2 + m14*x3 + m19*x4 + m24*x5; 139349b5e25fSSatish Balay x[4] -= m5*x1 + m10*x2 + m15*x3 + m20*x4 + m25*x5; 139449b5e25fSSatish Balay 139549b5e25fSSatish Balay x[5] -= m1*x6 + m6*x7 + m11*x8 + m16*x9 + m21*x10; 139649b5e25fSSatish Balay x[6] -= m2*x6 + m7*x7 + m12*x8 + m17*x9 + m22*x10; 139749b5e25fSSatish Balay x[7] -= m3*x6 + m8*x7 + m13*x8 + m18*x9 + m23*x10; 139849b5e25fSSatish Balay x[8] -= m4*x6 + m9*x7 + m14*x8 + m19*x9 + m24*x10; 139949b5e25fSSatish Balay x[9] -= m5*x6 + m10*x7 + m15*x8 + m20*x9 + m25*x10; 140049b5e25fSSatish Balay 140149b5e25fSSatish Balay x[10] -= m1*x11 + m6*x12 + m11*x13 + m16*x14 + m21*x15; 140249b5e25fSSatish Balay x[11] -= m2*x11 + m7*x12 + m12*x13 + m17*x14 + m22*x15; 140349b5e25fSSatish Balay x[12] -= m3*x11 + m8*x12 + m13*x13 + m18*x14 + m23*x15; 140449b5e25fSSatish Balay x[13] -= m4*x11 + m9*x12 + m14*x13 + m19*x14 + m24*x15; 140549b5e25fSSatish Balay x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15; 140649b5e25fSSatish Balay 140749b5e25fSSatish Balay x[15] -= m1*x16 + m6*x17 + m11*x18 + m16*x19 + m21*x20; 140849b5e25fSSatish Balay x[16] -= m2*x16 + m7*x17 + m12*x18 + m17*x19 + m22*x20; 140949b5e25fSSatish Balay x[17] -= m3*x16 + m8*x17 + m13*x18 + m18*x19 + m23*x20; 141049b5e25fSSatish Balay x[18] -= m4*x16 + m9*x17 + m14*x18 + m19*x19 + m24*x20; 141149b5e25fSSatish Balay x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20; 141249b5e25fSSatish Balay 141349b5e25fSSatish Balay x[20] -= m1*x21 + m6*x22 + m11*x23 + m16*x24 + m21*x25; 141449b5e25fSSatish Balay x[21] -= m2*x21 + m7*x22 + m12*x23 + m17*x24 + m22*x25; 141549b5e25fSSatish Balay x[22] -= m3*x21 + m8*x22 + m13*x23 + m18*x24 + m23*x25; 141649b5e25fSSatish Balay x[23] -= m4*x21 + m9*x22 + m14*x23 + m19*x24 + m24*x25; 141749b5e25fSSatish Balay x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25; 141849b5e25fSSatish Balay 141949b5e25fSSatish Balay pv += 25; 142049b5e25fSSatish Balay } 142149b5e25fSSatish Balay PLogFlops(250*nz+225); 142249b5e25fSSatish Balay } 142349b5e25fSSatish Balay row = *ajtmp++; 142449b5e25fSSatish Balay } 142549b5e25fSSatish Balay /* finished row so stick it into b->a */ 142649b5e25fSSatish Balay pv = ba + 25*bi[i]; 142749b5e25fSSatish Balay pj = bj + bi[i]; 142849b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 142949b5e25fSSatish Balay for (j=0; j<nz; j++) { 143049b5e25fSSatish Balay x = rtmp+25*pj[j]; 143149b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 143249b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 143349b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 143449b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16]; 143549b5e25fSSatish Balay pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20]; 143649b5e25fSSatish Balay pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; pv[24] = x[24]; 143749b5e25fSSatish Balay pv += 25; 143849b5e25fSSatish Balay } 143949b5e25fSSatish Balay /* invert diagonal block */ 144049b5e25fSSatish Balay w = ba + 25*diag_offset[i]; 144149b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr); 144249b5e25fSSatish Balay } 144349b5e25fSSatish Balay 144449b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 144549b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 144649b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 144749b5e25fSSatish Balay C->factor = FACTOR_LU; 144849b5e25fSSatish Balay C->assembled = PETSC_TRUE; 144949b5e25fSSatish Balay PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */ 145049b5e25fSSatish Balay PetscFunctionReturn(0); 145149b5e25fSSatish Balay } 145249b5e25fSSatish Balay /* 145349b5e25fSSatish Balay Version for when blocks are 5 by 5 Using natural ordering 145449b5e25fSSatish Balay */ 145549b5e25fSSatish Balay #undef __FUNC__ 14566f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering" 14576f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat A,Mat *B) 145849b5e25fSSatish Balay { 145949b5e25fSSatish Balay Mat C = *B; 146049b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 146149b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 146249b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 146349b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 146449b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 146549b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 146649b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 146749b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 146849b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 146949b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 147049b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 147149b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 147249b5e25fSSatish Balay 147349b5e25fSSatish Balay PetscFunctionBegin; 147449b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 147549b5e25fSSatish Balay for (i=0; i<n; i++) { 147649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 147749b5e25fSSatish Balay ajtmp = bj + bi[i]; 147849b5e25fSSatish Balay for (j=0; j<nz; j++) { 147949b5e25fSSatish Balay x = rtmp+25*ajtmp[j]; 148049b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 148149b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 148249b5e25fSSatish Balay x[16] = x[17] = x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0; 148349b5e25fSSatish Balay } 148449b5e25fSSatish Balay /* load in initial (unfactored row) */ 148549b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 148649b5e25fSSatish Balay ajtmpold = aj + ai[i]; 148749b5e25fSSatish Balay v = aa + 25*ai[i]; 148849b5e25fSSatish Balay for (j=0; j<nz; j++) { 148949b5e25fSSatish Balay x = rtmp+25*ajtmpold[j]; 149049b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 149149b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 149249b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 149349b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; 149449b5e25fSSatish Balay x[19] = v[19]; x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 149549b5e25fSSatish Balay x[24] = v[24]; 149649b5e25fSSatish Balay v += 25; 149749b5e25fSSatish Balay } 149849b5e25fSSatish Balay row = *ajtmp++; 149949b5e25fSSatish Balay while (row < i) { 150049b5e25fSSatish Balay pc = rtmp + 25*row; 150149b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 150249b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 150349b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 150449b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17]; 150549b5e25fSSatish Balay p19 = pc[18]; p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; 150649b5e25fSSatish Balay p24 = pc[23]; p25 = pc[24]; 150749b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 150849b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 150949b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 151049b5e25fSSatish Balay || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 151149b5e25fSSatish Balay || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || p25 != 0.0) { 151249b5e25fSSatish Balay pv = ba + 25*diag_offset[row]; 151349b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 151449b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 151549b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 151649b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 151749b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; 151849b5e25fSSatish Balay x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 151949b5e25fSSatish Balay x25 = pv[24]; 152049b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p6*x2 + p11*x3 + p16*x4 + p21*x5; 152149b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p7*x2 + p12*x3 + p17*x4 + p22*x5; 152249b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p8*x2 + p13*x3 + p18*x4 + p23*x5; 152349b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p9*x2 + p14*x3 + p19*x4 + p24*x5; 152449b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5; 152549b5e25fSSatish Balay 152649b5e25fSSatish Balay pc[5] = m6 = p1*x6 + p6*x7 + p11*x8 + p16*x9 + p21*x10; 152749b5e25fSSatish Balay pc[6] = m7 = p2*x6 + p7*x7 + p12*x8 + p17*x9 + p22*x10; 152849b5e25fSSatish Balay pc[7] = m8 = p3*x6 + p8*x7 + p13*x8 + p18*x9 + p23*x10; 152949b5e25fSSatish Balay pc[8] = m9 = p4*x6 + p9*x7 + p14*x8 + p19*x9 + p24*x10; 153049b5e25fSSatish Balay pc[9] = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10; 153149b5e25fSSatish Balay 153249b5e25fSSatish Balay pc[10] = m11 = p1*x11 + p6*x12 + p11*x13 + p16*x14 + p21*x15; 153349b5e25fSSatish Balay pc[11] = m12 = p2*x11 + p7*x12 + p12*x13 + p17*x14 + p22*x15; 153449b5e25fSSatish Balay pc[12] = m13 = p3*x11 + p8*x12 + p13*x13 + p18*x14 + p23*x15; 153549b5e25fSSatish Balay pc[13] = m14 = p4*x11 + p9*x12 + p14*x13 + p19*x14 + p24*x15; 153649b5e25fSSatish Balay pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15; 153749b5e25fSSatish Balay 153849b5e25fSSatish Balay pc[15] = m16 = p1*x16 + p6*x17 + p11*x18 + p16*x19 + p21*x20; 153949b5e25fSSatish Balay pc[16] = m17 = p2*x16 + p7*x17 + p12*x18 + p17*x19 + p22*x20; 154049b5e25fSSatish Balay pc[17] = m18 = p3*x16 + p8*x17 + p13*x18 + p18*x19 + p23*x20; 154149b5e25fSSatish Balay pc[18] = m19 = p4*x16 + p9*x17 + p14*x18 + p19*x19 + p24*x20; 154249b5e25fSSatish Balay pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20; 154349b5e25fSSatish Balay 154449b5e25fSSatish Balay pc[20] = m21 = p1*x21 + p6*x22 + p11*x23 + p16*x24 + p21*x25; 154549b5e25fSSatish Balay pc[21] = m22 = p2*x21 + p7*x22 + p12*x23 + p17*x24 + p22*x25; 154649b5e25fSSatish Balay pc[22] = m23 = p3*x21 + p8*x22 + p13*x23 + p18*x24 + p23*x25; 154749b5e25fSSatish Balay pc[23] = m24 = p4*x21 + p9*x22 + p14*x23 + p19*x24 + p24*x25; 154849b5e25fSSatish Balay pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25; 154949b5e25fSSatish Balay 155049b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 155149b5e25fSSatish Balay pv += 25; 155249b5e25fSSatish Balay for (j=0; j<nz; j++) { 155349b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 155449b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 155549b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 155649b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; 155749b5e25fSSatish Balay x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; 155849b5e25fSSatish Balay x24 = pv[23]; x25 = pv[24]; 155949b5e25fSSatish Balay x = rtmp + 25*pj[j]; 156049b5e25fSSatish Balay x[0] -= m1*x1 + m6*x2 + m11*x3 + m16*x4 + m21*x5; 156149b5e25fSSatish Balay x[1] -= m2*x1 + m7*x2 + m12*x3 + m17*x4 + m22*x5; 156249b5e25fSSatish Balay x[2] -= m3*x1 + m8*x2 + m13*x3 + m18*x4 + m23*x5; 156349b5e25fSSatish Balay x[3] -= m4*x1 + m9*x2 + m14*x3 + m19*x4 + m24*x5; 156449b5e25fSSatish Balay x[4] -= m5*x1 + m10*x2 + m15*x3 + m20*x4 + m25*x5; 156549b5e25fSSatish Balay 156649b5e25fSSatish Balay x[5] -= m1*x6 + m6*x7 + m11*x8 + m16*x9 + m21*x10; 156749b5e25fSSatish Balay x[6] -= m2*x6 + m7*x7 + m12*x8 + m17*x9 + m22*x10; 156849b5e25fSSatish Balay x[7] -= m3*x6 + m8*x7 + m13*x8 + m18*x9 + m23*x10; 156949b5e25fSSatish Balay x[8] -= m4*x6 + m9*x7 + m14*x8 + m19*x9 + m24*x10; 157049b5e25fSSatish Balay x[9] -= m5*x6 + m10*x7 + m15*x8 + m20*x9 + m25*x10; 157149b5e25fSSatish Balay 157249b5e25fSSatish Balay x[10] -= m1*x11 + m6*x12 + m11*x13 + m16*x14 + m21*x15; 157349b5e25fSSatish Balay x[11] -= m2*x11 + m7*x12 + m12*x13 + m17*x14 + m22*x15; 157449b5e25fSSatish Balay x[12] -= m3*x11 + m8*x12 + m13*x13 + m18*x14 + m23*x15; 157549b5e25fSSatish Balay x[13] -= m4*x11 + m9*x12 + m14*x13 + m19*x14 + m24*x15; 157649b5e25fSSatish Balay x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15; 157749b5e25fSSatish Balay 157849b5e25fSSatish Balay x[15] -= m1*x16 + m6*x17 + m11*x18 + m16*x19 + m21*x20; 157949b5e25fSSatish Balay x[16] -= m2*x16 + m7*x17 + m12*x18 + m17*x19 + m22*x20; 158049b5e25fSSatish Balay x[17] -= m3*x16 + m8*x17 + m13*x18 + m18*x19 + m23*x20; 158149b5e25fSSatish Balay x[18] -= m4*x16 + m9*x17 + m14*x18 + m19*x19 + m24*x20; 158249b5e25fSSatish Balay x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20; 158349b5e25fSSatish Balay 158449b5e25fSSatish Balay x[20] -= m1*x21 + m6*x22 + m11*x23 + m16*x24 + m21*x25; 158549b5e25fSSatish Balay x[21] -= m2*x21 + m7*x22 + m12*x23 + m17*x24 + m22*x25; 158649b5e25fSSatish Balay x[22] -= m3*x21 + m8*x22 + m13*x23 + m18*x24 + m23*x25; 158749b5e25fSSatish Balay x[23] -= m4*x21 + m9*x22 + m14*x23 + m19*x24 + m24*x25; 158849b5e25fSSatish Balay x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25; 158949b5e25fSSatish Balay pv += 25; 159049b5e25fSSatish Balay } 159149b5e25fSSatish Balay PLogFlops(250*nz+225); 159249b5e25fSSatish Balay } 159349b5e25fSSatish Balay row = *ajtmp++; 159449b5e25fSSatish Balay } 159549b5e25fSSatish Balay /* finished row so stick it into b->a */ 159649b5e25fSSatish Balay pv = ba + 25*bi[i]; 159749b5e25fSSatish Balay pj = bj + bi[i]; 159849b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 159949b5e25fSSatish Balay for (j=0; j<nz; j++) { 160049b5e25fSSatish Balay x = rtmp+25*pj[j]; 160149b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 160249b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 160349b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 160449b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16]; pv[17] = x[17]; 160549b5e25fSSatish Balay pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; 160649b5e25fSSatish Balay pv[23] = x[23]; pv[24] = x[24]; 160749b5e25fSSatish Balay pv += 25; 160849b5e25fSSatish Balay } 160949b5e25fSSatish Balay /* invert diagonal block */ 161049b5e25fSSatish Balay w = ba + 25*diag_offset[i]; 161149b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr); 161249b5e25fSSatish Balay } 161349b5e25fSSatish Balay 161449b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 161549b5e25fSSatish Balay C->factor = FACTOR_LU; 161649b5e25fSSatish Balay C->assembled = PETSC_TRUE; 161749b5e25fSSatish Balay PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */ 161849b5e25fSSatish Balay PetscFunctionReturn(0); 161949b5e25fSSatish Balay } 162049b5e25fSSatish Balay 162149b5e25fSSatish Balay /* 162249b5e25fSSatish Balay Version for when blocks are 4 by 4 162349b5e25fSSatish Balay */ 162449b5e25fSSatish Balay #undef __FUNC__ 16256f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4" 16266f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat A,Mat *B) 162749b5e25fSSatish Balay { 162849b5e25fSSatish Balay Mat C = *B; 162949b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 163049b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 163149b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 163249b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 163349b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 163449b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 163549b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 163649b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 163749b5e25fSSatish Balay MatScalar p10,p11,p12,p13,p14,p15,p16,m10,m11,m12; 163849b5e25fSSatish Balay MatScalar m13,m14,m15,m16; 163949b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 164049b5e25fSSatish Balay 164149b5e25fSSatish Balay PetscFunctionBegin; 164249b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 164349b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 164449b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(16*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 164549b5e25fSSatish Balay 164649b5e25fSSatish Balay for (i=0; i<n; i++) { 164749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 164849b5e25fSSatish Balay ajtmp = bj + bi[i]; 164949b5e25fSSatish Balay for (j=0; j<nz; j++) { 165049b5e25fSSatish Balay x = rtmp+16*ajtmp[j]; 165149b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 165249b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 165349b5e25fSSatish Balay } 165449b5e25fSSatish Balay /* load in initial (unfactored row) */ 165549b5e25fSSatish Balay idx = r[i]; 165649b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 165749b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 165849b5e25fSSatish Balay v = aa + 16*ai[idx]; 165949b5e25fSSatish Balay for (j=0; j<nz; j++) { 166049b5e25fSSatish Balay x = rtmp+16*ic[ajtmpold[j]]; 166149b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 166249b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 166349b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 166449b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; 166549b5e25fSSatish Balay v += 16; 166649b5e25fSSatish Balay } 166749b5e25fSSatish Balay row = *ajtmp++; 166849b5e25fSSatish Balay while (row < i) { 166949b5e25fSSatish Balay pc = rtmp + 16*row; 167049b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 167149b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 167249b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 167349b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; 167449b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 167549b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 167649b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 167749b5e25fSSatish Balay || p16 != 0.0) { 167849b5e25fSSatish Balay pv = ba + 16*diag_offset[row]; 167949b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 168049b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 168149b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 168249b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 168349b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; 168449b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p5*x2 + p9*x3 + p13*x4; 168549b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p6*x2 + p10*x3 + p14*x4; 168649b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p7*x2 + p11*x3 + p15*x4; 168749b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p8*x2 + p12*x3 + p16*x4; 168849b5e25fSSatish Balay 168949b5e25fSSatish Balay pc[4] = m5 = p1*x5 + p5*x6 + p9*x7 + p13*x8; 169049b5e25fSSatish Balay pc[5] = m6 = p2*x5 + p6*x6 + p10*x7 + p14*x8; 169149b5e25fSSatish Balay pc[6] = m7 = p3*x5 + p7*x6 + p11*x7 + p15*x8; 169249b5e25fSSatish Balay pc[7] = m8 = p4*x5 + p8*x6 + p12*x7 + p16*x8; 169349b5e25fSSatish Balay 169449b5e25fSSatish Balay pc[8] = m9 = p1*x9 + p5*x10 + p9*x11 + p13*x12; 169549b5e25fSSatish Balay pc[9] = m10 = p2*x9 + p6*x10 + p10*x11 + p14*x12; 169649b5e25fSSatish Balay pc[10] = m11 = p3*x9 + p7*x10 + p11*x11 + p15*x12; 169749b5e25fSSatish Balay pc[11] = m12 = p4*x9 + p8*x10 + p12*x11 + p16*x12; 169849b5e25fSSatish Balay 169949b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p5*x14 + p9*x15 + p13*x16; 170049b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p6*x14 + p10*x15 + p14*x16; 170149b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p7*x14 + p11*x15 + p15*x16; 170249b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p8*x14 + p12*x15 + p16*x16; 170349b5e25fSSatish Balay 170449b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 170549b5e25fSSatish Balay pv += 16; 170649b5e25fSSatish Balay for (j=0; j<nz; j++) { 170749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 170849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 170949b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 171049b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 171149b5e25fSSatish Balay x = rtmp + 16*pj[j]; 171249b5e25fSSatish Balay x[0] -= m1*x1 + m5*x2 + m9*x3 + m13*x4; 171349b5e25fSSatish Balay x[1] -= m2*x1 + m6*x2 + m10*x3 + m14*x4; 171449b5e25fSSatish Balay x[2] -= m3*x1 + m7*x2 + m11*x3 + m15*x4; 171549b5e25fSSatish Balay x[3] -= m4*x1 + m8*x2 + m12*x3 + m16*x4; 171649b5e25fSSatish Balay 171749b5e25fSSatish Balay x[4] -= m1*x5 + m5*x6 + m9*x7 + m13*x8; 171849b5e25fSSatish Balay x[5] -= m2*x5 + m6*x6 + m10*x7 + m14*x8; 171949b5e25fSSatish Balay x[6] -= m3*x5 + m7*x6 + m11*x7 + m15*x8; 172049b5e25fSSatish Balay x[7] -= m4*x5 + m8*x6 + m12*x7 + m16*x8; 172149b5e25fSSatish Balay 172249b5e25fSSatish Balay x[8] -= m1*x9 + m5*x10 + m9*x11 + m13*x12; 172349b5e25fSSatish Balay x[9] -= m2*x9 + m6*x10 + m10*x11 + m14*x12; 172449b5e25fSSatish Balay x[10] -= m3*x9 + m7*x10 + m11*x11 + m15*x12; 172549b5e25fSSatish Balay x[11] -= m4*x9 + m8*x10 + m12*x11 + m16*x12; 172649b5e25fSSatish Balay 172749b5e25fSSatish Balay x[12] -= m1*x13 + m5*x14 + m9*x15 + m13*x16; 172849b5e25fSSatish Balay x[13] -= m2*x13 + m6*x14 + m10*x15 + m14*x16; 172949b5e25fSSatish Balay x[14] -= m3*x13 + m7*x14 + m11*x15 + m15*x16; 173049b5e25fSSatish Balay x[15] -= m4*x13 + m8*x14 + m12*x15 + m16*x16; 173149b5e25fSSatish Balay 173249b5e25fSSatish Balay pv += 16; 173349b5e25fSSatish Balay } 173449b5e25fSSatish Balay PLogFlops(128*nz+112); 173549b5e25fSSatish Balay } 173649b5e25fSSatish Balay row = *ajtmp++; 173749b5e25fSSatish Balay } 173849b5e25fSSatish Balay /* finished row so stick it into b->a */ 173949b5e25fSSatish Balay pv = ba + 16*bi[i]; 174049b5e25fSSatish Balay pj = bj + bi[i]; 174149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 174249b5e25fSSatish Balay for (j=0; j<nz; j++) { 174349b5e25fSSatish Balay x = rtmp+16*pj[j]; 174449b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 174549b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 174649b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 174749b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 174849b5e25fSSatish Balay pv += 16; 174949b5e25fSSatish Balay } 175049b5e25fSSatish Balay /* invert diagonal block */ 175149b5e25fSSatish Balay w = ba + 16*diag_offset[i]; 175249b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_4(w);CHKERRQ(ierr); 175349b5e25fSSatish Balay } 175449b5e25fSSatish Balay 175549b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 175649b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 175749b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 175849b5e25fSSatish Balay C->factor = FACTOR_LU; 175949b5e25fSSatish Balay C->assembled = PETSC_TRUE; 17607a05c331SHong Zhang C->preallocated = PETSC_TRUE; 176149b5e25fSSatish Balay PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */ 176249b5e25fSSatish Balay PetscFunctionReturn(0); 176349b5e25fSSatish Balay } 176449b5e25fSSatish Balay /* 176549b5e25fSSatish Balay Version for when blocks are 4 by 4 Using natural ordering 176649b5e25fSSatish Balay */ 176749b5e25fSSatish Balay #undef __FUNC__ 17686f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering" 17696f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering(Mat A,Mat *B) 177049b5e25fSSatish Balay { 177149b5e25fSSatish Balay Mat C = *B; 177249b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 177349b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 177449b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 177549b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 177649b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 177749b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 177849b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 177949b5e25fSSatish Balay MatScalar p10,p11,p12,p13,p14,p15,p16,m10,m11,m12; 178049b5e25fSSatish Balay MatScalar m13,m14,m15,m16; 178149b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 178249b5e25fSSatish Balay 178349b5e25fSSatish Balay PetscFunctionBegin; 178449b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(16*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 178549b5e25fSSatish Balay 178649b5e25fSSatish Balay for (i=0; i<n; i++) { 178749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 178849b5e25fSSatish Balay ajtmp = bj + bi[i]; 178949b5e25fSSatish Balay for (j=0; j<nz; j++) { 179049b5e25fSSatish Balay x = rtmp+16*ajtmp[j]; 179149b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 179249b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 179349b5e25fSSatish Balay } 179449b5e25fSSatish Balay /* load in initial (unfactored row) */ 179549b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 179649b5e25fSSatish Balay ajtmpold = aj + ai[i]; 179749b5e25fSSatish Balay v = aa + 16*ai[i]; 179849b5e25fSSatish Balay for (j=0; j<nz; j++) { 179949b5e25fSSatish Balay x = rtmp+16*ajtmpold[j]; 180049b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 180149b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 180249b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 180349b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; 180449b5e25fSSatish Balay v += 16; 180549b5e25fSSatish Balay } 180649b5e25fSSatish Balay row = *ajtmp++; 180749b5e25fSSatish Balay while (row < i) { 180849b5e25fSSatish Balay pc = rtmp + 16*row; 180949b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 181049b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 181149b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 181249b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; 181349b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 181449b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 181549b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 181649b5e25fSSatish Balay || p16 != 0.0) { 181749b5e25fSSatish Balay pv = ba + 16*diag_offset[row]; 181849b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 181949b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 182049b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 182149b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 182249b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; 182349b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p5*x2 + p9*x3 + p13*x4; 182449b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p6*x2 + p10*x3 + p14*x4; 182549b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p7*x2 + p11*x3 + p15*x4; 182649b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p8*x2 + p12*x3 + p16*x4; 182749b5e25fSSatish Balay 182849b5e25fSSatish Balay pc[4] = m5 = p1*x5 + p5*x6 + p9*x7 + p13*x8; 182949b5e25fSSatish Balay pc[5] = m6 = p2*x5 + p6*x6 + p10*x7 + p14*x8; 183049b5e25fSSatish Balay pc[6] = m7 = p3*x5 + p7*x6 + p11*x7 + p15*x8; 183149b5e25fSSatish Balay pc[7] = m8 = p4*x5 + p8*x6 + p12*x7 + p16*x8; 183249b5e25fSSatish Balay 183349b5e25fSSatish Balay pc[8] = m9 = p1*x9 + p5*x10 + p9*x11 + p13*x12; 183449b5e25fSSatish Balay pc[9] = m10 = p2*x9 + p6*x10 + p10*x11 + p14*x12; 183549b5e25fSSatish Balay pc[10] = m11 = p3*x9 + p7*x10 + p11*x11 + p15*x12; 183649b5e25fSSatish Balay pc[11] = m12 = p4*x9 + p8*x10 + p12*x11 + p16*x12; 183749b5e25fSSatish Balay 183849b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p5*x14 + p9*x15 + p13*x16; 183949b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p6*x14 + p10*x15 + p14*x16; 184049b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p7*x14 + p11*x15 + p15*x16; 184149b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p8*x14 + p12*x15 + p16*x16; 184249b5e25fSSatish Balay 184349b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 184449b5e25fSSatish Balay pv += 16; 184549b5e25fSSatish Balay for (j=0; j<nz; j++) { 184649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 184749b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 184849b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 184949b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 185049b5e25fSSatish Balay x = rtmp + 16*pj[j]; 185149b5e25fSSatish Balay x[0] -= m1*x1 + m5*x2 + m9*x3 + m13*x4; 185249b5e25fSSatish Balay x[1] -= m2*x1 + m6*x2 + m10*x3 + m14*x4; 185349b5e25fSSatish Balay x[2] -= m3*x1 + m7*x2 + m11*x3 + m15*x4; 185449b5e25fSSatish Balay x[3] -= m4*x1 + m8*x2 + m12*x3 + m16*x4; 185549b5e25fSSatish Balay 185649b5e25fSSatish Balay x[4] -= m1*x5 + m5*x6 + m9*x7 + m13*x8; 185749b5e25fSSatish Balay x[5] -= m2*x5 + m6*x6 + m10*x7 + m14*x8; 185849b5e25fSSatish Balay x[6] -= m3*x5 + m7*x6 + m11*x7 + m15*x8; 185949b5e25fSSatish Balay x[7] -= m4*x5 + m8*x6 + m12*x7 + m16*x8; 186049b5e25fSSatish Balay 186149b5e25fSSatish Balay x[8] -= m1*x9 + m5*x10 + m9*x11 + m13*x12; 186249b5e25fSSatish Balay x[9] -= m2*x9 + m6*x10 + m10*x11 + m14*x12; 186349b5e25fSSatish Balay x[10] -= m3*x9 + m7*x10 + m11*x11 + m15*x12; 186449b5e25fSSatish Balay x[11] -= m4*x9 + m8*x10 + m12*x11 + m16*x12; 186549b5e25fSSatish Balay 186649b5e25fSSatish Balay x[12] -= m1*x13 + m5*x14 + m9*x15 + m13*x16; 186749b5e25fSSatish Balay x[13] -= m2*x13 + m6*x14 + m10*x15 + m14*x16; 186849b5e25fSSatish Balay x[14] -= m3*x13 + m7*x14 + m11*x15 + m15*x16; 186949b5e25fSSatish Balay x[15] -= m4*x13 + m8*x14 + m12*x15 + m16*x16; 187049b5e25fSSatish Balay 187149b5e25fSSatish Balay pv += 16; 187249b5e25fSSatish Balay } 187349b5e25fSSatish Balay PLogFlops(128*nz+112); 187449b5e25fSSatish Balay } 187549b5e25fSSatish Balay row = *ajtmp++; 187649b5e25fSSatish Balay } 187749b5e25fSSatish Balay /* finished row so stick it into b->a */ 187849b5e25fSSatish Balay pv = ba + 16*bi[i]; 187949b5e25fSSatish Balay pj = bj + bi[i]; 188049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 188149b5e25fSSatish Balay for (j=0; j<nz; j++) { 188249b5e25fSSatish Balay x = rtmp+16*pj[j]; 188349b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 188449b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 188549b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 188649b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 188749b5e25fSSatish Balay pv += 16; 188849b5e25fSSatish Balay } 188949b5e25fSSatish Balay /* invert diagonal block */ 189049b5e25fSSatish Balay w = ba + 16*diag_offset[i]; 189149b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_4(w);CHKERRQ(ierr); 189249b5e25fSSatish Balay } 189349b5e25fSSatish Balay 189449b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 189549b5e25fSSatish Balay C->factor = FACTOR_LU; 189649b5e25fSSatish Balay C->assembled = PETSC_TRUE; 18977a05c331SHong Zhang C->preallocated = PETSC_TRUE; 189849b5e25fSSatish Balay PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */ 189949b5e25fSSatish Balay PetscFunctionReturn(0); 190049b5e25fSSatish Balay } 190149b5e25fSSatish Balay 1902*a1723e09SHong Zhang /* Version for when blocks are 3 by 3 */ 190349b5e25fSSatish Balay #undef __FUNC__ 19046f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3" 19056f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3(Mat A,Mat *B) 190649b5e25fSSatish Balay { 190749b5e25fSSatish Balay Mat C = *B; 1908*a1723e09SHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data; 1909*a1723e09SHong Zhang IS perm = b->row; 1910*a1723e09SHong Zhang int *perm_ptr,ierr,i,j,mbs=a->mbs,*bi=b->i,*bj=b->j; 1911*a1723e09SHong Zhang int *ai,*aj,*a2anew,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili; 1912*a1723e09SHong Zhang MatScalar *ba = b->a,*aa,*ap,*dk,*uik; 1913*a1723e09SHong Zhang MatScalar *u,*diag,*rtmp,*rtmp_ptr; 191449b5e25fSSatish Balay 191549b5e25fSSatish Balay PetscFunctionBegin; 1916*a1723e09SHong Zhang printf("called FactorNumeric_SeqSBAIJ_3\n"); 1917*a1723e09SHong Zhang /* initialization */ 1918*a1723e09SHong Zhang rtmp = (MatScalar*)PetscMalloc(9*mbs*sizeof(MatScalar));CHKPTRQ(rtmp); 1919*a1723e09SHong Zhang ierr = PetscMemzero(rtmp,9*mbs*sizeof(MatScalar));CHKERRQ(ierr); 1920*a1723e09SHong Zhang il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il); 1921*a1723e09SHong Zhang jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 1922*a1723e09SHong Zhang for (i=0; i<mbs; i++) { 1923*a1723e09SHong Zhang jl[i] = mbs; il[0] = 0; 1924*a1723e09SHong Zhang } 1925*a1723e09SHong Zhang dk = (MatScalar*)PetscMalloc(9*sizeof(MatScalar));CHKPTRQ(dk); 1926*a1723e09SHong Zhang uik = (MatScalar*)PetscMalloc(9*sizeof(MatScalar));CHKPTRQ(uik); 1927*a1723e09SHong Zhang ierr = ISGetIndices(perm,&perm_ptr);CHKERRQ(ierr); 192849b5e25fSSatish Balay 1929*a1723e09SHong Zhang /* check permutation */ 1930*a1723e09SHong Zhang if (!a->permute){ 1931*a1723e09SHong Zhang ai = a->i; aj = a->j; aa = a->a; 1932*a1723e09SHong Zhang } else { 1933*a1723e09SHong Zhang ai = a->inew; aj = a->jnew; 1934*a1723e09SHong Zhang aa = (MatScalar*)PetscMalloc(9*ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa); 1935*a1723e09SHong Zhang ierr = PetscMemcpy(aa,a->a,9*ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr); 1936*a1723e09SHong Zhang a2anew = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(a2anew); 1937*a1723e09SHong Zhang ierr= PetscMemcpy(a2anew,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr); 193849b5e25fSSatish Balay 1939*a1723e09SHong Zhang for (i=0; i<mbs; i++){ 1940*a1723e09SHong Zhang jmin = ai[i]; jmax = ai[i+1]; 1941*a1723e09SHong Zhang for (j=jmin; j<jmax; j++){ 1942*a1723e09SHong Zhang while (a2anew[j] != j){ 1943*a1723e09SHong Zhang k = a2anew[j]; a2anew[j] = a2anew[k]; a2anew[k] = k; 1944*a1723e09SHong Zhang for (k1=0; k1<9; k1++){ 1945*a1723e09SHong Zhang dk[k1] = aa[k*9+k1]; 1946*a1723e09SHong Zhang aa[k*9+k1] = aa[j*9+k1]; 1947*a1723e09SHong Zhang aa[j*9+k1] = dk[k1]; 1948*a1723e09SHong Zhang } 1949*a1723e09SHong Zhang } 1950*a1723e09SHong Zhang /* transform columnoriented blocks that lie in the lower triangle to roworiented blocks */ 1951*a1723e09SHong Zhang if (i > aj[j]){ 1952*a1723e09SHong Zhang printf("change orientation, row: %d, col: %d\n",i,aj[j]); 1953*a1723e09SHong Zhang ap = aa + j*9; /* ptr to the beginning of j-th block of aa */ 1954*a1723e09SHong Zhang for (k=0; k<9; k++) dk[k] = ap[k]; /* dk <- j-th block of aa */ 1955*a1723e09SHong Zhang for (k=0; k<3; k++){ /* j-th block of aa <- dk^T */ 1956*a1723e09SHong Zhang for (k1=0; k1<3; k++){ 1957*a1723e09SHong Zhang *ap++ = dk[k + 3*k1]; 1958*a1723e09SHong Zhang } 1959*a1723e09SHong Zhang } 1960*a1723e09SHong Zhang } 1961*a1723e09SHong Zhang } 1962*a1723e09SHong Zhang } 1963*a1723e09SHong Zhang ierr = PetscFree(a2anew);CHKERRA(ierr); 1964*a1723e09SHong Zhang } 196549b5e25fSSatish Balay 1966*a1723e09SHong Zhang /* for each row k */ 1967*a1723e09SHong Zhang for (k = 0; k<mbs; k++){ 196849b5e25fSSatish Balay 1969*a1723e09SHong Zhang /*initialize k-th row with elements nonzero in row perm(k) of A */ 1970*a1723e09SHong Zhang jmin = ai[perm_ptr[k]]; jmax = ai[perm_ptr[k]+1]; 1971*a1723e09SHong Zhang if (jmin < jmax) { 1972*a1723e09SHong Zhang ap = aa + jmin*9; 1973*a1723e09SHong Zhang for (j = jmin; j < jmax; j++){ 1974*a1723e09SHong Zhang vj = perm_ptr[aj[j]]; /* block col. index */ 1975*a1723e09SHong Zhang rtmp_ptr = rtmp + vj*9; 1976*a1723e09SHong Zhang for (i=0; i<9; i++) *rtmp_ptr++ = *ap++; 1977*a1723e09SHong Zhang } 1978*a1723e09SHong Zhang } 197949b5e25fSSatish Balay 1980*a1723e09SHong Zhang /* modify k-th row by adding in those rows i with U(i,k) != 0 */ 1981*a1723e09SHong Zhang ierr = PetscMemcpy(dk,rtmp+k*9,9*sizeof(MatScalar));CHKERRQ(ierr); 1982*a1723e09SHong Zhang i = jl[k]; /* first row to be added to k_th row */ 1983*a1723e09SHong Zhang 1984*a1723e09SHong Zhang while (i < mbs){ 1985*a1723e09SHong Zhang nexti = jl[i]; /* next row to be added to k_th row */ 1986*a1723e09SHong Zhang 1987*a1723e09SHong Zhang /* compute multiplier */ 1988*a1723e09SHong Zhang ili = il[i]; /* index of first nonzero element in U(i,k:bms-1) */ 1989*a1723e09SHong Zhang 1990*a1723e09SHong Zhang /* uik = -inv(Di)*U_bar(i,k) */ 1991*a1723e09SHong Zhang diag = ba + i*9; 1992*a1723e09SHong Zhang u = ba + ili*9; 1993*a1723e09SHong Zhang 1994*a1723e09SHong Zhang uik[0] = -(diag[0]*u[0] + diag[3]*u[1] + diag[6]*u[2]); 1995*a1723e09SHong Zhang uik[1] = -(diag[1]*u[0] + diag[4]*u[1] + diag[7]*u[2]); 1996*a1723e09SHong Zhang uik[2] = -(diag[2]*u[0] + diag[5]*u[1] + diag[8]*u[2]); 1997*a1723e09SHong Zhang 1998*a1723e09SHong Zhang uik[3] = -(diag[0]*u[3] + diag[3]*u[4] + diag[6]*u[5]); 1999*a1723e09SHong Zhang uik[4] = -(diag[1]*u[3] + diag[4]*u[4] + diag[7]*u[5]); 2000*a1723e09SHong Zhang uik[5] = -(diag[2]*u[3] + diag[5]*u[4] + diag[8]*u[5]); 2001*a1723e09SHong Zhang 2002*a1723e09SHong Zhang uik[6] = -(diag[0]*u[6] + diag[3]*u[7] + diag[6]*u[8]); 2003*a1723e09SHong Zhang uik[7] = -(diag[1]*u[6] + diag[4]*u[7] + diag[7]*u[8]); 2004*a1723e09SHong Zhang uik[8] = -(diag[2]*u[6] + diag[5]*u[7] + diag[8]*u[8]); 2005*a1723e09SHong Zhang 2006*a1723e09SHong Zhang /* update D(k) += -U(i,k)^T * U_bar(i,k) */ 2007*a1723e09SHong Zhang dk[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2]; 2008*a1723e09SHong Zhang dk[1] += uik[3]*u[0] + uik[4]*u[1] + uik[5]*u[2]; 2009*a1723e09SHong Zhang dk[2] += uik[6]*u[0] + uik[7]*u[1] + uik[8]*u[2]; 2010*a1723e09SHong Zhang 2011*a1723e09SHong Zhang dk[3] += uik[0]*u[3] + uik[1]*u[4] + uik[2]*u[5]; 2012*a1723e09SHong Zhang dk[4] += uik[3]*u[3] + uik[4]*u[4] + uik[5]*u[5]; 2013*a1723e09SHong Zhang dk[5] += uik[6]*u[3] + uik[7]*u[4] + uik[8]*u[5]; 2014*a1723e09SHong Zhang 2015*a1723e09SHong Zhang dk[6] += uik[0]*u[6] + uik[1]*u[7] + uik[2]*u[8]; 2016*a1723e09SHong Zhang dk[7] += uik[3]*u[6] + uik[4]*u[7] + uik[5]*u[8]; 2017*a1723e09SHong Zhang dk[8] += uik[6]*u[6] + uik[7]*u[7] + uik[8]*u[8]; 2018*a1723e09SHong Zhang 2019*a1723e09SHong Zhang /* update -U(i,k) */ 2020*a1723e09SHong Zhang ierr = PetscMemcpy(ba+ili*9,uik,9*sizeof(MatScalar));CHKERRQ(ierr); 2021*a1723e09SHong Zhang 2022*a1723e09SHong Zhang /* add multiple of row i to k-th row ... */ 2023*a1723e09SHong Zhang jmin = ili + 1; jmax = bi[i+1]; 2024*a1723e09SHong Zhang if (jmin < jmax){ 2025*a1723e09SHong Zhang for (j=jmin; j<jmax; j++) { 2026*a1723e09SHong Zhang /* rtmp += -U(i,k)^T * U_bar(i,j) */ 2027*a1723e09SHong Zhang rtmp_ptr = rtmp + bj[j]*9; 2028*a1723e09SHong Zhang u = ba + j*9; 2029*a1723e09SHong Zhang rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2]; 2030*a1723e09SHong Zhang rtmp_ptr[1] += uik[3]*u[0] + uik[4]*u[1] + uik[5]*u[2]; 2031*a1723e09SHong Zhang rtmp_ptr[2] += uik[6]*u[0] + uik[7]*u[1] + uik[8]*u[2]; 2032*a1723e09SHong Zhang 2033*a1723e09SHong Zhang rtmp_ptr[3] += uik[0]*u[3] + uik[1]*u[4] + uik[2]*u[5]; 2034*a1723e09SHong Zhang rtmp_ptr[4] += uik[3]*u[3] + uik[4]*u[4] + uik[5]*u[5]; 2035*a1723e09SHong Zhang rtmp_ptr[5] += uik[6]*u[3] + uik[7]*u[4] + uik[8]*u[5]; 2036*a1723e09SHong Zhang 2037*a1723e09SHong Zhang rtmp_ptr[6] += uik[0]*u[6] + uik[1]*u[7] + uik[2]*u[8]; 2038*a1723e09SHong Zhang rtmp_ptr[7] += uik[3]*u[6] + uik[4]*u[7] + uik[5]*u[8]; 2039*a1723e09SHong Zhang rtmp_ptr[8] += uik[6]*u[6] + uik[7]*u[7] + uik[8]*u[8]; 204049b5e25fSSatish Balay } 2041*a1723e09SHong Zhang 2042*a1723e09SHong Zhang /* ... add i to row list for next nonzero entry */ 2043*a1723e09SHong Zhang il[i] = jmin; /* update il(i) in column k+1, ... mbs-1 */ 2044*a1723e09SHong Zhang j = bj[jmin]; 2045*a1723e09SHong Zhang jl[i] = jl[j]; jl[j] = i; /* update jl */ 204649b5e25fSSatish Balay } 2047*a1723e09SHong Zhang i = nexti; 204849b5e25fSSatish Balay } 2049*a1723e09SHong Zhang 2050*a1723e09SHong Zhang /* save nonzero entries in k-th row of U ... */ 2051*a1723e09SHong Zhang 205249b5e25fSSatish Balay /* invert diagonal block */ 2053*a1723e09SHong Zhang diag = ba+k*9; 2054*a1723e09SHong Zhang ierr = PetscMemcpy(diag,dk,9*sizeof(MatScalar));CHKERRQ(ierr); 2055*a1723e09SHong Zhang ierr = Kernel_A_gets_inverse_A_3(diag);CHKERRQ(ierr); 2056*a1723e09SHong Zhang 2057*a1723e09SHong Zhang jmin = bi[k]; jmax = bi[k+1]; 2058*a1723e09SHong Zhang if (jmin < jmax) { 2059*a1723e09SHong Zhang for (j=jmin; j<jmax; j++){ 2060*a1723e09SHong Zhang vj = bj[j]; /* block col. index of U */ 2061*a1723e09SHong Zhang u = ba + j*9; 2062*a1723e09SHong Zhang rtmp_ptr = rtmp + vj*9; 2063*a1723e09SHong Zhang for (k1=0; k1<9; k1++){ 2064*a1723e09SHong Zhang *u++ = *rtmp_ptr; 2065*a1723e09SHong Zhang *rtmp_ptr++ = 0.0; 2066*a1723e09SHong Zhang } 2067*a1723e09SHong Zhang } 2068*a1723e09SHong Zhang 2069*a1723e09SHong Zhang /* ... add k to row list for first nonzero entry in k-th row */ 2070*a1723e09SHong Zhang il[k] = jmin; 2071*a1723e09SHong Zhang i = bj[jmin]; 2072*a1723e09SHong Zhang jl[k] = jl[i]; jl[i] = k; 2073*a1723e09SHong Zhang } 207449b5e25fSSatish Balay } 207549b5e25fSSatish Balay 207649b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 2077*a1723e09SHong Zhang ierr = PetscFree(il);CHKERRQ(ierr); 2078*a1723e09SHong Zhang ierr = PetscFree(jl);CHKERRQ(ierr); 2079*a1723e09SHong Zhang ierr = PetscFree(dk);CHKERRQ(ierr); 2080*a1723e09SHong Zhang ierr = PetscFree(uik);CHKERRQ(ierr); 2081*a1723e09SHong Zhang if (a->permute){ 2082*a1723e09SHong Zhang ierr = PetscFree(aa);CHKERRQ(ierr); 2083*a1723e09SHong Zhang } 2084*a1723e09SHong Zhang 2085*a1723e09SHong Zhang ierr = ISRestoreIndices(perm,&perm_ptr);CHKERRQ(ierr); 2086*a1723e09SHong Zhang C->factor = FACTOR_CHOLESKY; 208749b5e25fSSatish Balay C->assembled = PETSC_TRUE; 20887a05c331SHong Zhang C->preallocated = PETSC_TRUE; 2089*a1723e09SHong Zhang PLogFlops(b->mbs); 209049b5e25fSSatish Balay PetscFunctionReturn(0); 209149b5e25fSSatish Balay } 2092*a1723e09SHong Zhang 209349b5e25fSSatish Balay /* 209449b5e25fSSatish Balay Version for when blocks are 3 by 3 Using natural ordering 209549b5e25fSSatish Balay */ 209649b5e25fSSatish Balay #undef __FUNC__ 20976f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering" 20986f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering(Mat A,Mat *B) 209949b5e25fSSatish Balay { 210049b5e25fSSatish Balay Mat C = *B; 210149b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 210249b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 210349b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 210449b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 210549b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 210649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 210749b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9; 210849b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 210949b5e25fSSatish Balay 211049b5e25fSSatish Balay PetscFunctionBegin; 211149b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(9*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 211249b5e25fSSatish Balay 211349b5e25fSSatish Balay for (i=0; i<n; i++) { 211449b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 211549b5e25fSSatish Balay ajtmp = bj + bi[i]; 211649b5e25fSSatish Balay for (j=0; j<nz; j++) { 211749b5e25fSSatish Balay x = rtmp+9*ajtmp[j]; 211849b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = 0.0; 211949b5e25fSSatish Balay } 212049b5e25fSSatish Balay /* load in initial (unfactored row) */ 212149b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 212249b5e25fSSatish Balay ajtmpold = aj + ai[i]; 212349b5e25fSSatish Balay v = aa + 9*ai[i]; 212449b5e25fSSatish Balay for (j=0; j<nz; j++) { 212549b5e25fSSatish Balay x = rtmp+9*ajtmpold[j]; 212649b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 212749b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 212849b5e25fSSatish Balay v += 9; 212949b5e25fSSatish Balay } 213049b5e25fSSatish Balay row = *ajtmp++; 213149b5e25fSSatish Balay while (row < i) { 213249b5e25fSSatish Balay pc = rtmp + 9*row; 213349b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 213449b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 213549b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 213649b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0) { 213749b5e25fSSatish Balay pv = ba + 9*diag_offset[row]; 213849b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 213949b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 214049b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 214149b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p4*x2 + p7*x3; 214249b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p5*x2 + p8*x3; 214349b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p6*x2 + p9*x3; 214449b5e25fSSatish Balay 214549b5e25fSSatish Balay pc[3] = m4 = p1*x4 + p4*x5 + p7*x6; 214649b5e25fSSatish Balay pc[4] = m5 = p2*x4 + p5*x5 + p8*x6; 214749b5e25fSSatish Balay pc[5] = m6 = p3*x4 + p6*x5 + p9*x6; 214849b5e25fSSatish Balay 214949b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p4*x8 + p7*x9; 215049b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p5*x8 + p8*x9; 215149b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p6*x8 + p9*x9; 215249b5e25fSSatish Balay 215349b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 215449b5e25fSSatish Balay pv += 9; 215549b5e25fSSatish Balay for (j=0; j<nz; j++) { 215649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 215749b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 215849b5e25fSSatish Balay x = rtmp + 9*pj[j]; 215949b5e25fSSatish Balay x[0] -= m1*x1 + m4*x2 + m7*x3; 216049b5e25fSSatish Balay x[1] -= m2*x1 + m5*x2 + m8*x3; 216149b5e25fSSatish Balay x[2] -= m3*x1 + m6*x2 + m9*x3; 216249b5e25fSSatish Balay 216349b5e25fSSatish Balay x[3] -= m1*x4 + m4*x5 + m7*x6; 216449b5e25fSSatish Balay x[4] -= m2*x4 + m5*x5 + m8*x6; 216549b5e25fSSatish Balay x[5] -= m3*x4 + m6*x5 + m9*x6; 216649b5e25fSSatish Balay 216749b5e25fSSatish Balay x[6] -= m1*x7 + m4*x8 + m7*x9; 216849b5e25fSSatish Balay x[7] -= m2*x7 + m5*x8 + m8*x9; 216949b5e25fSSatish Balay x[8] -= m3*x7 + m6*x8 + m9*x9; 217049b5e25fSSatish Balay pv += 9; 217149b5e25fSSatish Balay } 217249b5e25fSSatish Balay PLogFlops(54*nz+36); 217349b5e25fSSatish Balay } 217449b5e25fSSatish Balay row = *ajtmp++; 217549b5e25fSSatish Balay } 217649b5e25fSSatish Balay /* finished row so stick it into b->a */ 217749b5e25fSSatish Balay pv = ba + 9*bi[i]; 217849b5e25fSSatish Balay pj = bj + bi[i]; 217949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 218049b5e25fSSatish Balay for (j=0; j<nz; j++) { 218149b5e25fSSatish Balay x = rtmp+9*pj[j]; 218249b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 218349b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 218449b5e25fSSatish Balay pv += 9; 218549b5e25fSSatish Balay } 218649b5e25fSSatish Balay /* invert diagonal block */ 218749b5e25fSSatish Balay w = ba + 9*diag_offset[i]; 218849b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_3(w);CHKERRQ(ierr); 218949b5e25fSSatish Balay } 219049b5e25fSSatish Balay 219149b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 219249b5e25fSSatish Balay C->factor = FACTOR_LU; 219349b5e25fSSatish Balay C->assembled = PETSC_TRUE; 21945c0bcdfcSHong Zhang C->preallocated = PETSC_TRUE; 219549b5e25fSSatish Balay PLogFlops(1.3333*27*b->mbs); /* from inverting diagonal blocks */ 219649b5e25fSSatish Balay PetscFunctionReturn(0); 219749b5e25fSSatish Balay } 219849b5e25fSSatish Balay 219949b5e25fSSatish Balay /* 2200fcf159c0SHong Zhang Numeric U^T*D*U factorization for SBAIJ format. Modified from SNF of YSMP. 2201cc0c071aSHong Zhang Version for blocks 2 by 2. 220249b5e25fSSatish Balay */ 220349b5e25fSSatish Balay #undef __FUNC__ 22046f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2" 22056f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2(Mat A,Mat *B) 220649b5e25fSSatish Balay { 220749b5e25fSSatish Balay Mat C = *B; 220891602c66SHong Zhang Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data; 2209cc0c071aSHong Zhang IS perm = b->row; 2210cc0c071aSHong Zhang int *perm_ptr,ierr,i,j,mbs=a->mbs,*bi=b->i,*bj=b->j; 2211cc0c071aSHong Zhang int *ai,*aj,*a2anew,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili; 2212*a1723e09SHong Zhang MatScalar *ba = b->a,*aa,*ap,*dk,*uik; 2213cc0c071aSHong Zhang MatScalar *u,*diag,*rtmp,*rtmp_ptr; 221449b5e25fSSatish Balay 221549b5e25fSSatish Balay PetscFunctionBegin; 221649b5e25fSSatish Balay 221791602c66SHong Zhang /* initialization */ 221891602c66SHong Zhang /* il and jl record the first nonzero element in each row of the accessing 221991602c66SHong Zhang window U(0:k, k:mbs-1). 222091602c66SHong Zhang jl: list of rows to be added to uneliminated rows 222191602c66SHong Zhang i>= k: jl(i) is the first row to be added to row i 222291602c66SHong Zhang i< k: jl(i) is the row following row i in some list of rows 222391602c66SHong Zhang jl(i) = mbs indicates the end of a list 222491602c66SHong Zhang il(i): points to the first nonzero element in columns k,...,mbs-1 of 222591602c66SHong Zhang row i of U */ 2226cc0c071aSHong Zhang rtmp = (MatScalar*)PetscMalloc(4*mbs*sizeof(MatScalar));CHKPTRQ(rtmp); 2227cc0c071aSHong Zhang ierr = PetscMemzero(rtmp,4*mbs*sizeof(MatScalar));CHKERRQ(ierr); 222891602c66SHong Zhang il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il); 222991602c66SHong Zhang jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 223091602c66SHong Zhang for (i=0; i<mbs; i++) { 22313845f261SHong Zhang jl[i] = mbs; il[0] = 0; 223291602c66SHong Zhang } 2233cc0c071aSHong Zhang dk = (MatScalar*)PetscMalloc(4*sizeof(MatScalar));CHKPTRQ(dk); 2234cc0c071aSHong Zhang uik = (MatScalar*)PetscMalloc(4*sizeof(MatScalar));CHKPTRQ(uik); 2235cc0c071aSHong Zhang ierr = ISGetIndices(perm,&perm_ptr);CHKERRQ(ierr); 2236cc0c071aSHong Zhang 2237cc0c071aSHong Zhang /* check permutation */ 2238cc0c071aSHong Zhang if (!a->permute){ 2239cc0c071aSHong Zhang ai = a->i; aj = a->j; aa = a->a; 2240cc0c071aSHong Zhang } else { 2241cc0c071aSHong Zhang ai = a->inew; aj = a->jnew; 2242cc0c071aSHong Zhang aa = (MatScalar*)PetscMalloc(4*ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa); 2243cc0c071aSHong Zhang ierr = PetscMemcpy(aa,a->a,4*ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr); 2244cc0c071aSHong Zhang a2anew = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(a2anew); 2245cc0c071aSHong Zhang ierr= PetscMemcpy(a2anew,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr); 2246cc0c071aSHong Zhang 2247cc0c071aSHong Zhang for (i=0; i<mbs; i++){ 2248cc0c071aSHong Zhang jmin = ai[i]; jmax = ai[i+1]; 2249cc0c071aSHong Zhang for (j=jmin; j<jmax; j++){ 2250cc0c071aSHong Zhang while (a2anew[j] != j){ 2251cc0c071aSHong Zhang k = a2anew[j]; a2anew[j] = a2anew[k]; a2anew[k] = k; 2252cc0c071aSHong Zhang for (k1=0; k1<4; k1++){ 2253cc0c071aSHong Zhang dk[k1] = aa[k*4+k1]; 2254cc0c071aSHong Zhang aa[k*4+k1] = aa[j*4+k1]; 2255cc0c071aSHong Zhang aa[j*4+k1] = dk[k1]; 2256cc0c071aSHong Zhang } 2257cc0c071aSHong Zhang } 2258cc0c071aSHong Zhang /* transform columnoriented blocks that lie in the lower triangle to roworiented blocks */ 2259cc0c071aSHong Zhang if (i > aj[j]){ 2260*a1723e09SHong Zhang /* printf("change orientation, row: %d, col: %d\n",i,aj[j]); */ 2261cc0c071aSHong Zhang ap = aa + j*4; /* ptr to the beginning of the block */ 2262cc0c071aSHong Zhang dk[1] = ap[1]; /* swap ap[1] and ap[2] */ 2263cc0c071aSHong Zhang ap[1] = ap[2]; 2264cc0c071aSHong Zhang ap[2] = dk[1]; 2265cc0c071aSHong Zhang } 2266cc0c071aSHong Zhang } 2267cc0c071aSHong Zhang } 2268cc0c071aSHong Zhang ierr = PetscFree(a2anew);CHKERRA(ierr); 2269cc0c071aSHong Zhang } 22703845f261SHong Zhang 227191602c66SHong Zhang /* for each row k */ 227291602c66SHong Zhang for (k = 0; k<mbs; k++){ 227391602c66SHong Zhang 227491602c66SHong Zhang /*initialize k-th row with elements nonzero in row perm(k) of A */ 2275cc0c071aSHong Zhang jmin = ai[perm_ptr[k]]; jmax = ai[perm_ptr[k]+1]; 227691602c66SHong Zhang if (jmin < jmax) { 2277cc0c071aSHong Zhang ap = aa + jmin*4; 227891602c66SHong Zhang for (j = jmin; j < jmax; j++){ 2279cc0c071aSHong Zhang vj = perm_ptr[aj[j]]; /* block col. index */ 2280cc0c071aSHong Zhang rtmp_ptr = rtmp + vj*4; 2281cc0c071aSHong Zhang for (i=0; i<4; i++) *rtmp_ptr++ = *ap++; 228291602c66SHong Zhang } 228391602c66SHong Zhang } 228491602c66SHong Zhang 228591602c66SHong Zhang /* modify k-th row by adding in those rows i with U(i,k) != 0 */ 2286cc0c071aSHong Zhang ierr = PetscMemcpy(dk,rtmp+k*4,4*sizeof(MatScalar));CHKERRQ(ierr); 228791602c66SHong Zhang i = jl[k]; /* first row to be added to k_th row */ 228891602c66SHong Zhang 228991602c66SHong Zhang while (i < mbs){ 229091602c66SHong Zhang nexti = jl[i]; /* next row to be added to k_th row */ 229191602c66SHong Zhang 22923845f261SHong Zhang /* compute multiplier */ 229391602c66SHong Zhang ili = il[i]; /* index of first nonzero element in U(i,k:bms-1) */ 22943845f261SHong Zhang 22953845f261SHong Zhang /* uik = -inv(Di)*U_bar(i,k): - ba[ili]*ba[i] */ 2296cc0c071aSHong Zhang diag = ba + i*4; 2297cc0c071aSHong Zhang u = ba + ili*4; 2298cc0c071aSHong Zhang uik[0] = -(diag[0]*u[0] + diag[2]*u[1]); 2299cc0c071aSHong Zhang uik[1] = -(diag[1]*u[0] + diag[3]*u[1]); 2300cc0c071aSHong Zhang uik[2] = -(diag[0]*u[2] + diag[2]*u[3]); 2301cc0c071aSHong Zhang uik[3] = -(diag[1]*u[2] + diag[3]*u[3]); 23023845f261SHong Zhang 23033845f261SHong Zhang /* update D(k) += -U(i,k)^T * U_bar(i,k): dk += uik*ba[ili] */ 2304cc0c071aSHong Zhang dk[0] += uik[0]*u[0] + uik[1]*u[1]; 2305cc0c071aSHong Zhang dk[1] += uik[2]*u[0] + uik[3]*u[1]; 2306cc0c071aSHong Zhang dk[2] += uik[0]*u[2] + uik[1]*u[3]; 2307cc0c071aSHong Zhang dk[3] += uik[2]*u[2] + uik[3]*u[3]; 23083845f261SHong Zhang 23093845f261SHong Zhang /* update -U(i,k): ba[ili] = uik */ 2310cc0c071aSHong Zhang ierr = PetscMemcpy(ba+ili*4,uik,4*sizeof(MatScalar));CHKERRQ(ierr); 231191602c66SHong Zhang 231291602c66SHong Zhang /* add multiple of row i to k-th row ... */ 231391602c66SHong Zhang jmin = ili + 1; jmax = bi[i+1]; 231491602c66SHong Zhang if (jmin < jmax){ 23153845f261SHong Zhang for (j=jmin; j<jmax; j++) { 23163845f261SHong Zhang /* rtmp += -U(i,k)^T * U_bar(i,j): rtmp[bj[j]] += uik*ba[j]; */ 2317cc0c071aSHong Zhang rtmp_ptr = rtmp + bj[j]*4; 2318cc0c071aSHong Zhang u = ba + j*4; 2319cc0c071aSHong Zhang rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1]; 2320cc0c071aSHong Zhang rtmp_ptr[1] += uik[2]*u[0] + uik[3]*u[1]; 2321cc0c071aSHong Zhang rtmp_ptr[2] += uik[0]*u[2] + uik[1]*u[3]; 2322cc0c071aSHong Zhang rtmp_ptr[3] += uik[2]*u[2] + uik[3]*u[3]; 23233845f261SHong Zhang } 23243845f261SHong Zhang 232591602c66SHong Zhang /* ... add i to row list for next nonzero entry */ 232691602c66SHong Zhang il[i] = jmin; /* update il(i) in column k+1, ... mbs-1 */ 232791602c66SHong Zhang j = bj[jmin]; 232891602c66SHong Zhang jl[i] = jl[j]; jl[j] = i; /* update jl */ 232991602c66SHong Zhang } 2330*a1723e09SHong Zhang i = nexti; 233191602c66SHong Zhang } 2332cc0c071aSHong Zhang 233391602c66SHong Zhang /* save nonzero entries in k-th row of U ... */ 23343845f261SHong Zhang 2335cc0c071aSHong Zhang /* invert diagonal block */ 2336cc0c071aSHong Zhang diag = ba+k*4; 2337cc0c071aSHong Zhang ierr = PetscMemcpy(diag,dk,4*sizeof(MatScalar));CHKERRQ(ierr); 23383845f261SHong Zhang ierr = Kernel_A_gets_inverse_A_2(diag);CHKERRQ(ierr); 23393845f261SHong Zhang 234091602c66SHong Zhang jmin = bi[k]; jmax = bi[k+1]; 234191602c66SHong Zhang if (jmin < jmax) { 234291602c66SHong Zhang for (j=jmin; j<jmax; j++){ 2343cc0c071aSHong Zhang vj = bj[j]; /* block col. index of U */ 2344cc0c071aSHong Zhang u = ba + j*4; 2345cc0c071aSHong Zhang rtmp_ptr = rtmp + vj*4; 2346cc0c071aSHong Zhang for (k1=0; k1<4; k1++){ 2347cc0c071aSHong Zhang *u++ = *rtmp_ptr; 2348cc0c071aSHong Zhang *rtmp_ptr++ = 0.0; 2349cc0c071aSHong Zhang } 2350cc0c071aSHong Zhang } 23513845f261SHong Zhang 235291602c66SHong Zhang /* ... add k to row list for first nonzero entry in k-th row */ 235391602c66SHong Zhang il[k] = jmin; 235491602c66SHong Zhang i = bj[jmin]; 235591602c66SHong Zhang jl[k] = jl[i]; jl[i] = k; 235691602c66SHong Zhang } 235791602c66SHong Zhang } 23583845f261SHong Zhang 235949b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 236091602c66SHong Zhang ierr = PetscFree(il);CHKERRQ(ierr); 236191602c66SHong Zhang ierr = PetscFree(jl);CHKERRQ(ierr); 23623845f261SHong Zhang ierr = PetscFree(dk);CHKERRQ(ierr); 23633845f261SHong Zhang ierr = PetscFree(uik);CHKERRQ(ierr); 236491602c66SHong Zhang if (a->permute){ 236591602c66SHong Zhang ierr = PetscFree(aa);CHKERRQ(ierr); 236691602c66SHong Zhang } 236791602c66SHong Zhang 2368cc0c071aSHong Zhang ierr = ISRestoreIndices(perm,&perm_ptr);CHKERRQ(ierr); 236991602c66SHong Zhang C->factor = FACTOR_CHOLESKY; 237049b5e25fSSatish Balay C->assembled = PETSC_TRUE; 23715c0bcdfcSHong Zhang C->preallocated = PETSC_TRUE; 237291602c66SHong Zhang PLogFlops(b->mbs); 237349b5e25fSSatish Balay PetscFunctionReturn(0); 237449b5e25fSSatish Balay } 237591602c66SHong Zhang 237649b5e25fSSatish Balay /* 237749b5e25fSSatish Balay Version for when blocks are 2 by 2 Using natural ordering 237849b5e25fSSatish Balay */ 237949b5e25fSSatish Balay #undef __FUNC__ 23806f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering" 23816f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering(Mat A,Mat *B) 238249b5e25fSSatish Balay { 238349b5e25fSSatish Balay Mat C = *B; 238449b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 238549b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 238649b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 238749b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 238849b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 238949b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,x1,x2,x3,x4; 239049b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 239149b5e25fSSatish Balay 239249b5e25fSSatish Balay PetscFunctionBegin; 239349b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(4*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 239449b5e25fSSatish Balay 239549b5e25fSSatish Balay for (i=0; i<n; i++) { 239649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 239749b5e25fSSatish Balay ajtmp = bj + bi[i]; 239849b5e25fSSatish Balay for (j=0; j<nz; j++) { 239949b5e25fSSatish Balay x = rtmp+4*ajtmp[j]; 240049b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = 0.0; 240149b5e25fSSatish Balay } 240249b5e25fSSatish Balay /* load in initial (unfactored row) */ 240349b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 240449b5e25fSSatish Balay ajtmpold = aj + ai[i]; 240549b5e25fSSatish Balay v = aa + 4*ai[i]; 240649b5e25fSSatish Balay for (j=0; j<nz; j++) { 240749b5e25fSSatish Balay x = rtmp+4*ajtmpold[j]; 240849b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 240949b5e25fSSatish Balay v += 4; 241049b5e25fSSatish Balay } 241149b5e25fSSatish Balay row = *ajtmp++; 241249b5e25fSSatish Balay while (row < i) { 241349b5e25fSSatish Balay pc = rtmp + 4*row; 241449b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 241549b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0) { 241649b5e25fSSatish Balay pv = ba + 4*diag_offset[row]; 241749b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 241849b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 241949b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p3*x2; 242049b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p4*x2; 242149b5e25fSSatish Balay pc[2] = m3 = p1*x3 + p3*x4; 242249b5e25fSSatish Balay pc[3] = m4 = p2*x3 + p4*x4; 242349b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 242449b5e25fSSatish Balay pv += 4; 242549b5e25fSSatish Balay for (j=0; j<nz; j++) { 242649b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 242749b5e25fSSatish Balay x = rtmp + 4*pj[j]; 242849b5e25fSSatish Balay x[0] -= m1*x1 + m3*x2; 242949b5e25fSSatish Balay x[1] -= m2*x1 + m4*x2; 243049b5e25fSSatish Balay x[2] -= m1*x3 + m3*x4; 243149b5e25fSSatish Balay x[3] -= m2*x3 + m4*x4; 243249b5e25fSSatish Balay pv += 4; 243349b5e25fSSatish Balay } 243449b5e25fSSatish Balay PLogFlops(16*nz+12); 243549b5e25fSSatish Balay } 243649b5e25fSSatish Balay row = *ajtmp++; 243749b5e25fSSatish Balay } 243849b5e25fSSatish Balay /* finished row so stick it into b->a */ 243949b5e25fSSatish Balay pv = ba + 4*bi[i]; 244049b5e25fSSatish Balay pj = bj + bi[i]; 244149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 244249b5e25fSSatish Balay for (j=0; j<nz; j++) { 244349b5e25fSSatish Balay x = rtmp+4*pj[j]; 244449b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 244549b5e25fSSatish Balay pv += 4; 244649b5e25fSSatish Balay } 244749b5e25fSSatish Balay /* invert diagonal block */ 244849b5e25fSSatish Balay w = ba + 4*diag_offset[i]; 244949b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_2(w);CHKERRQ(ierr); 245049b5e25fSSatish Balay /*Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work);*/ 245149b5e25fSSatish Balay } 245249b5e25fSSatish Balay 245349b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 245449b5e25fSSatish Balay C->factor = FACTOR_LU; 245549b5e25fSSatish Balay C->assembled = PETSC_TRUE; 24565c0bcdfcSHong Zhang C->preallocated = PETSC_TRUE; 245749b5e25fSSatish Balay PLogFlops(1.3333*8*b->mbs); /* from inverting diagonal blocks */ 245849b5e25fSSatish Balay PetscFunctionReturn(0); 245949b5e25fSSatish Balay } 246049b5e25fSSatish Balay 246149b5e25fSSatish Balay /* 24625c0bcdfcSHong Zhang Numeric U^T*D*U factorization for SBAIJ format. Modified from SNF of YSMP. 246391602c66SHong Zhang Version for blocks are 1 by 1. 246449b5e25fSSatish Balay */ 246549b5e25fSSatish Balay #undef __FUNC__ 24666f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_1" 24676f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_1(Mat A,Mat *B) 246849b5e25fSSatish Balay { 246949b5e25fSSatish Balay Mat C = *B; 247049b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data; 247149b5e25fSSatish Balay IS ip = b->row; 2472351d0355SHong Zhang int *rip,ierr,i,j,mbs = a->mbs,*bi = b->i,*bj = b->j; 2473cb718733SHong Zhang int *ai,*aj,*r; 2474066653e3SSatish Balay MatScalar *rtmp; 24752d007305SHong Zhang MatScalar *ba = b->a,*aa,ak; 247649b5e25fSSatish Balay MatScalar dk,uikdi; 2477cc0c071aSHong Zhang int k,jmin,jmax,*jl,*il,vj,nexti,ili; 247849b5e25fSSatish Balay 247949b5e25fSSatish Balay PetscFunctionBegin; 248049b5e25fSSatish Balay ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 2481cb718733SHong Zhang if (!a->permute){ 24822d007305SHong Zhang ai = a->i; aj = a->j; aa = a->a; 24832d007305SHong Zhang } else { 24842d007305SHong Zhang ai = a->inew; aj = a->jnew; 24852d007305SHong Zhang aa = (MatScalar*)PetscMalloc(ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa); 2486cb718733SHong Zhang ierr = PetscMemcpy(aa,a->a,ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr); 24872d007305SHong Zhang r = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(r); 24882d007305SHong Zhang ierr= PetscMemcpy(r,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr); 24892d007305SHong Zhang 24902d007305SHong Zhang jmin = ai[0]; jmax = ai[mbs]; 24912d007305SHong Zhang for (j=jmin; j<jmax; j++){ 2492cb718733SHong Zhang while (r[j] != j){ 24932d007305SHong Zhang k = r[j]; r[j] = r[k]; r[k] = k; 24942d007305SHong Zhang ak = aa[k]; aa[k] = aa[j]; aa[j] = ak; 24952d007305SHong Zhang } 24962d007305SHong Zhang } 24972d007305SHong Zhang ierr = PetscFree(r);CHKERRA(ierr); 24982d007305SHong Zhang } 24992d007305SHong Zhang 250091602c66SHong Zhang /* initialization */ 250149b5e25fSSatish Balay /* il and jl record the first nonzero element in each row of the accessing 250249b5e25fSSatish Balay window U(0:k, k:mbs-1). 250349b5e25fSSatish Balay jl: list of rows to be added to uneliminated rows 250449b5e25fSSatish Balay i>= k: jl(i) is the first row to be added to row i 250549b5e25fSSatish Balay i< k: jl(i) is the row following row i in some list of rows 250649b5e25fSSatish Balay jl(i) = mbs indicates the end of a list 250749b5e25fSSatish Balay il(i): points to the first nonzero element in columns k,...,mbs-1 of 250849b5e25fSSatish Balay row i of U */ 250949b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(mbs*sizeof(MatScalar));CHKPTRQ(rtmp); 251049b5e25fSSatish Balay il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il); 251149b5e25fSSatish Balay jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 251249b5e25fSSatish Balay for (i=0; i<mbs; i++) { 251349b5e25fSSatish Balay rtmp[i] = 0.0; jl[i] = mbs; il[0] = 0; 251449b5e25fSSatish Balay } 251549b5e25fSSatish Balay 251691602c66SHong Zhang /* for each row k */ 251749b5e25fSSatish Balay for (k = 0; k<mbs; k++){ 251849b5e25fSSatish Balay 251991602c66SHong Zhang /*initialize k-th row with elements nonzero in row perm(k) of A */ 252049b5e25fSSatish Balay jmin = ai[rip[k]]; jmax = ai[rip[k]+1]; 252149b5e25fSSatish Balay if (jmin < jmax) { 252249b5e25fSSatish Balay for (j = jmin; j < jmax; j++){ 2523351d0355SHong Zhang vj = rip[aj[j]]; 2524cc0c071aSHong Zhang /* if (k <= vj)*/ rtmp[vj] = aa[j]; 252549b5e25fSSatish Balay } 252649b5e25fSSatish Balay } 252749b5e25fSSatish Balay 252891602c66SHong Zhang /* modify k-th row by adding in those rows i with U(i,k) != 0 */ 252949b5e25fSSatish Balay dk = rtmp[k]; 253049b5e25fSSatish Balay i = jl[k]; /* first row to be added to k_th row */ 253149b5e25fSSatish Balay /* printf(" k=%d, pivot row = %d\n",k,i); */ 253249b5e25fSSatish Balay 253349b5e25fSSatish Balay while (i < mbs){ 253449b5e25fSSatish Balay nexti = jl[i]; /* next row to be added to k_th row */ 253549b5e25fSSatish Balay 253691602c66SHong Zhang /* compute multiplier, update D(k) and U(i,k) */ 253749b5e25fSSatish Balay ili = il[i]; /* index of first nonzero element in U(i,k:bms-1) */ 253849b5e25fSSatish Balay uikdi = - ba[ili]*ba[i]; 253949b5e25fSSatish Balay dk += uikdi*ba[ili]; 2540658e7b3eSHong Zhang ba[ili] = uikdi; /* -U(i,k) */ 254149b5e25fSSatish Balay 254291602c66SHong Zhang /* add multiple of row i to k-th row ... */ 254349b5e25fSSatish Balay jmin = ili + 1; jmax = bi[i+1]; 254449b5e25fSSatish Balay if (jmin < jmax){ 254549b5e25fSSatish Balay for (j=jmin; j<jmax; j++) rtmp[bj[j]] += uikdi*ba[j]; 254691602c66SHong Zhang /* ... add i to row list for next nonzero entry */ 254749b5e25fSSatish Balay il[i] = jmin; /* update il(i) in column k+1, ... mbs-1 */ 254849b5e25fSSatish Balay j = bj[jmin]; 254949b5e25fSSatish Balay jl[i] = jl[j]; jl[j] = i; /* update jl */ 255049b5e25fSSatish Balay } 25518be8c0c7SHong Zhang i = nexti; /* printf(" pivot row i=%d\n",i); */ 255249b5e25fSSatish Balay } 255349b5e25fSSatish Balay 255491602c66SHong Zhang /* check for zero pivot and save diagoanl element */ 255549b5e25fSSatish Balay if (dk == 0.0){ 255629bbc08cSBarry Smith SETERRQ(PETSC_ERR_MAT_LU_ZRPVT,"Zero pivot"); 25578be8c0c7SHong Zhang }else if (PetscRealPart(dk) < 0){ 25588be8c0c7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF,"Negative pivot: d[%d] = %g\n",k,dk); 255949b5e25fSSatish Balay } 256049b5e25fSSatish Balay 256191602c66SHong Zhang /* save nonzero entries in k-th row of U ... */ 2562f3dd7b2dSKris Buschelman ba[k] = 1.0/dk; 256349b5e25fSSatish Balay jmin = bi[k]; jmax = bi[k+1]; 256449b5e25fSSatish Balay if (jmin < jmax) { 256549b5e25fSSatish Balay for (j=jmin; j<jmax; j++){ 2566cc0c071aSHong Zhang vj = bj[j]; ba[j] = rtmp[vj]; rtmp[vj] = 0.0; 256749b5e25fSSatish Balay } 256891602c66SHong Zhang /* ... add k to row list for first nonzero entry in k-th row */ 256949b5e25fSSatish Balay il[k] = jmin; 257049b5e25fSSatish Balay i = bj[jmin]; 257149b5e25fSSatish Balay jl[k] = jl[i]; jl[i] = k; 257249b5e25fSSatish Balay } 257349b5e25fSSatish Balay } 257449b5e25fSSatish Balay 257549b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 257649b5e25fSSatish Balay ierr = PetscFree(il);CHKERRQ(ierr); 257749b5e25fSSatish Balay ierr = PetscFree(jl);CHKERRQ(ierr); 2578cb718733SHong Zhang if (a->permute){ 2579cb718733SHong Zhang ierr = PetscFree(aa);CHKERRQ(ierr); 2580cb718733SHong Zhang } 258149b5e25fSSatish Balay 258249b5e25fSSatish Balay ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 25838be8c0c7SHong Zhang C->factor = FACTOR_CHOLESKY; 258449b5e25fSSatish Balay C->assembled = PETSC_TRUE; 25855c0bcdfcSHong Zhang C->preallocated = PETSC_TRUE; 258649b5e25fSSatish Balay PLogFlops(b->mbs); 25875c0bcdfcSHong Zhang #ifdef TEMP 25885c0bcdfcSHong Zhang printf("in factnum_1\n"); 25895c0bcdfcSHong Zhang for (k=0; k<mbs; k++){ 25905c0bcdfcSHong Zhang i = b->i[k+1] - b->i[k]; 25915c0bcdfcSHong Zhang printf("\n b->i[%d]: %d, nzk: %d, diag: %g\n",k,b->i[k],i,b->a[k]); 25925c0bcdfcSHong Zhang jmin = b->i[k]; jmax = b->i[k+1]; 25935c0bcdfcSHong Zhang for (j=jmin; j<jmax; j++){ 25945c0bcdfcSHong Zhang printf(" %d %g, ",b->j[j],b->a[j]); 25955c0bcdfcSHong Zhang } 25965c0bcdfcSHong Zhang } 25975c0bcdfcSHong Zhang #endif 259849b5e25fSSatish Balay PetscFunctionReturn(0); 259949b5e25fSSatish Balay } 260049b5e25fSSatish Balay 260149b5e25fSSatish Balay #undef __FUNC__ 26026f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactor_SeqSBAIJ" 2603b8b23757SHong Zhang int MatCholeskyFactor_SeqSBAIJ(Mat A,IS perm,PetscReal f) 260449b5e25fSSatish Balay { 26054445ddedSHong Zhang int ierr; 260649b5e25fSSatish Balay Mat C; 260749b5e25fSSatish Balay 260849b5e25fSSatish Balay PetscFunctionBegin; 2609b8b23757SHong Zhang ierr = MatCholeskyFactorSymbolic(A,perm,f,&C);CHKERRQ(ierr); 2610a4ada70bSHong Zhang ierr = MatCholeskyFactorNumeric(A,&C);CHKERRQ(ierr); 26114445ddedSHong Zhang ierr = MatHeaderCopy(A,C);CHKERRQ(ierr); 261249b5e25fSSatish Balay PetscFunctionReturn(0); 261349b5e25fSSatish Balay } 261449b5e25fSSatish Balay 261549b5e25fSSatish Balay 2616