xref: /petsc/src/mat/impls/sbaij/seq/sbaijfact.c (revision b59abe41f7046795d52ee5645eea94fb5259d4d3)
149b5e25fSSatish Balay /* Using Modified Sparse Row (MSR) storage.
249b5e25fSSatish Balay See page 85, "Iterative Methods ..." by Saad. */
349b5e25fSSatish Balay 
4*b59abe41SHong Zhang /*$Id: sbaijfact.c,v 1.35 2000/10/30 19:58:55 hzhang Exp hzhang $*/
549b5e25fSSatish Balay /*
6effa298cSHong Zhang     Symbolic U^T*D*U factorization for SBAIJ format. Modified from SSF of YSMP.
749b5e25fSSatish Balay */
849b5e25fSSatish Balay #include "sbaij.h"
949b5e25fSSatish Balay #include "src/mat/impls/baij/seq/baij.h"
1049b5e25fSSatish Balay #include "src/vec/vecimpl.h"
1149b5e25fSSatish Balay #include "src/inline/ilu.h"
1249a6740bSHong Zhang #include "include/petscis.h"
1349b5e25fSSatish Balay 
1449b5e25fSSatish Balay #undef __FUNC__
156f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorSymbolic_SeqSBAIJ"
1677f73120SHong Zhang int MatCholeskyFactorSymbolic_SeqSBAIJ(Mat A,IS perm,PetscReal f,Mat *B)
1749b5e25fSSatish Balay {
1849b5e25fSSatish Balay   Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b;
19cb718733SHong Zhang   int         *rip,ierr,i,mbs = a->mbs,*ai,*aj;
20066653e3SSatish Balay   int         *jutmp,bs = a->bs,bs2=a->bs2;
21066653e3SSatish Balay   int         m,nzi,realloc = 0;
22066653e3SSatish Balay   int         *jl,*q,jumin,jmin,jmax,juptr,nzk,qm,*iu,*ju,k,j,vj,umax,maxadd;
23cb718733SHong Zhang   /* PetscTruth  ident; */
2449b5e25fSSatish Balay 
2549b5e25fSSatish Balay   PetscFunctionBegin;
2677f73120SHong Zhang   PetscValidHeaderSpecific(perm,IS_COOKIE);
2729bbc08cSBarry Smith   if (A->M != A->N) SETERRQ(PETSC_ERR_ARG_WRONG,"matrix must be square");
282d007305SHong Zhang 
29cb718733SHong Zhang   /* check whether perm is the identity mapping */
30cb718733SHong Zhang   /*
31cb718733SHong Zhang   ierr = ISView(perm, VIEWER_STDOUT_SELF);CHKERRA(ierr);
32cb718733SHong Zhang   ierr = ISIdentity(perm,&ident);CHKERRQ(ierr);
33cb718733SHong Zhang   printf("ident = %d\n", ident);
34cb718733SHong Zhang   */
35cb718733SHong Zhang   ierr = ISGetIndices(perm,&rip);CHKERRQ(ierr);
36cb718733SHong Zhang   for (i=0; i<mbs; i++){
37cb718733SHong Zhang     if (rip[i] != i){
38cb718733SHong Zhang       a->permute = PETSC_TRUE;
39cb718733SHong Zhang       /* printf("non-trivial perm\n"); */
40cb718733SHong Zhang       break;
4149a6740bSHong Zhang     }
42cb718733SHong Zhang   }
432d007305SHong Zhang 
44cb718733SHong Zhang   if (!a->permute){ /* without permutation */
452d007305SHong Zhang     ai = a->i; aj = a->j;
462d007305SHong Zhang   } else {       /* non-trivial permutation */
472d007305SHong Zhang     ierr = MatReorderingSeqSBAIJ(A, perm);CHKERRA(ierr);
482d007305SHong Zhang     ai = a->inew; aj = a->jnew;
492d007305SHong Zhang   }
502d007305SHong Zhang 
5149b5e25fSSatish Balay   /* initialization */
5249b5e25fSSatish Balay   /* Don't know how many column pointers are needed so estimate.
5349b5e25fSSatish Balay      Use Modified Sparse Row storage for u and ju, see Sasd pp.85 */
549f9cb213SHong Zhang   iu   = (int*)PetscMalloc((mbs+1)*sizeof(int));CHKPTRQ(iu);
5549b5e25fSSatish Balay   umax = (int)(f*ai[mbs] + 1); umax += mbs + 1;
569f9cb213SHong Zhang   ju   = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(ju);
5749b5e25fSSatish Balay   iu[0] = mbs+1;
5849b5e25fSSatish Balay   juptr = mbs;
5949b5e25fSSatish Balay   jl =  (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl);
6049b5e25fSSatish Balay   q  =  (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(q);
6149b5e25fSSatish Balay   for (i=0; i<mbs; i++){
6249b5e25fSSatish Balay     jl[i] = mbs; q[i] = 0;
6349b5e25fSSatish Balay   }
6449b5e25fSSatish Balay 
6549b5e25fSSatish Balay   /* for each row k */
6649b5e25fSSatish Balay   for (k=0; k<mbs; k++){
6749b5e25fSSatish Balay     nzk = 0; /* num. of nz blocks in k-th block row with diagonal block excluded */
6849b5e25fSSatish Balay     q[k] = mbs;
6949b5e25fSSatish Balay     /* initialize nonzero structure of k-th row to row rip[k] of A */
7049b5e25fSSatish Balay     jmin = ai[rip[k]];
7149b5e25fSSatish Balay     jmax = ai[rip[k]+1];
7249b5e25fSSatish Balay     for (j=jmin; j<jmax; j++){
73cb718733SHong Zhang       vj = rip[aj[j]]; /* col. value */
7449b5e25fSSatish Balay       if(vj > k){
7549b5e25fSSatish Balay         qm = k;
7649b5e25fSSatish Balay         do {
7749b5e25fSSatish Balay           m  = qm; qm = q[m];
7849b5e25fSSatish Balay         } while(qm < vj);
7949b5e25fSSatish Balay         if (qm == vj) {
8049b5e25fSSatish Balay           printf(" error: duplicate entry in A\n"); break;
8149b5e25fSSatish Balay         }
8249b5e25fSSatish Balay         nzk++;
8349b5e25fSSatish Balay         q[m] = vj;
8449b5e25fSSatish Balay         q[vj] = qm;
8549b5e25fSSatish Balay       } /* if(vj > k) */
8649b5e25fSSatish Balay     } /* for (j=jmin; j<jmax; j++) */
8749b5e25fSSatish Balay 
8849b5e25fSSatish Balay     /* modify nonzero structure of k-th row by computing fill-in
8949b5e25fSSatish Balay        for each row i to be merged in */
9049b5e25fSSatish Balay     i = k;
9149b5e25fSSatish Balay     i = jl[i]; /* next pivot row (== mbs for symbolic factorization) */
9249b5e25fSSatish Balay     /* printf(" next pivot row i=%d\n",i); */
9349b5e25fSSatish Balay     while (i < mbs){
9449b5e25fSSatish Balay       /* merge row i into k-th row */
9549b5e25fSSatish Balay       nzi = iu[i+1] - (iu[i]+1);
9649b5e25fSSatish Balay       jmin = iu[i] + 1; jmax = iu[i] + nzi;
9749b5e25fSSatish Balay       qm = k;
9849b5e25fSSatish Balay       for (j=jmin; j<jmax+1; j++){
9949b5e25fSSatish Balay         vj = ju[j];
10049b5e25fSSatish Balay         do {
10149b5e25fSSatish Balay           m = qm; qm = q[m];
10249b5e25fSSatish Balay         } while (qm < vj);
10349b5e25fSSatish Balay         if (qm != vj){
10449b5e25fSSatish Balay          nzk++; q[m] = vj; q[vj] = qm; qm = vj;
10549b5e25fSSatish Balay         }
10649b5e25fSSatish Balay       }
10749b5e25fSSatish Balay       i = jl[i]; /* next pivot row */
10849b5e25fSSatish Balay     }
10949b5e25fSSatish Balay 
11049b5e25fSSatish Balay     /* add k to row list for first nonzero element in k-th row */
11149b5e25fSSatish Balay     if (nzk > 0){
11249b5e25fSSatish Balay       i = q[k]; /* col value of first nonzero element in U(k, k+1:mbs-1) */
11349b5e25fSSatish Balay       jl[k] = jl[i]; jl[i] = k;
11449b5e25fSSatish Balay     }
11549b5e25fSSatish Balay     iu[k+1] = iu[k] + nzk;   /* printf(" iu[%d]=%d, umax=%d\n", k+1, iu[k+1],umax);*/
11649b5e25fSSatish Balay 
11749b5e25fSSatish Balay     /* allocate more space to ju if needed */
11849b5e25fSSatish Balay     if (iu[k+1] > umax) { printf("allocate more space, iu[%d]=%d > umax=%d\n",k+1, iu[k+1],umax);
11949b5e25fSSatish Balay       /* estimate how much additional space we will need */
12049b5e25fSSatish Balay       /* use the strategy suggested by David Hysom <hysom@perch-t.icase.edu> */
12149b5e25fSSatish Balay       /* just double the memory each time */
12249b5e25fSSatish Balay       maxadd = umax;
12349b5e25fSSatish Balay       if (maxadd < nzk) maxadd = (mbs-k)*(nzk+1)/2;
12449b5e25fSSatish Balay       umax += maxadd;
12549b5e25fSSatish Balay 
1269f9cb213SHong Zhang       /* allocate a longer ju */
12749b5e25fSSatish Balay       jutmp = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(jutmp);
12849b5e25fSSatish Balay       ierr  = PetscMemcpy(jutmp,ju,iu[k]*sizeof(int));CHKERRQ(ierr);
12949b5e25fSSatish Balay       ierr  = PetscFree(ju);CHKERRQ(ierr);
1309f9cb213SHong Zhang       ju    = jutmp;
13149b5e25fSSatish Balay       realloc++; /* count how many times we realloc */
13249b5e25fSSatish Balay     }
13349b5e25fSSatish Balay 
13449b5e25fSSatish Balay     /* save nonzero structure of k-th row in ju */
13549b5e25fSSatish Balay     i=k;
13649b5e25fSSatish Balay     jumin = juptr + 1; juptr += nzk;
13749b5e25fSSatish Balay     for (j=jumin; j<juptr+1; j++){
13849b5e25fSSatish Balay       i=q[i];
13949b5e25fSSatish Balay       ju[j]=i;
14049b5e25fSSatish Balay     }
14177f73120SHong Zhang   }
14249b5e25fSSatish Balay 
14349b5e25fSSatish Balay   if (ai[mbs] != 0) {
14449b5e25fSSatish Balay     PetscReal af = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]);
1456f9a564bSHong Zhang     PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Reallocs %d Fill ratio:given %g needed %g\n",realloc,f,af);
1466f9a564bSHong Zhang     PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Run with -pc_lu_fill %g or use \n",af);
1476f9a564bSHong Zhang     PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:PCLUSetFill(pc,%g);\n",af);
1486f9a564bSHong Zhang     PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:for best performance.\n");
14949b5e25fSSatish Balay   } else {
1506f9a564bSHong Zhang      PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Empty matrix.\n");
15149b5e25fSSatish Balay   }
15249b5e25fSSatish Balay 
15377f73120SHong Zhang   ierr = ISRestoreIndices(perm,&rip);CHKERRQ(ierr);
15449b5e25fSSatish Balay   ierr = PetscFree(q);CHKERRQ(ierr);
15549b5e25fSSatish Balay   ierr = PetscFree(jl);CHKERRQ(ierr);
15649b5e25fSSatish Balay 
15749b5e25fSSatish Balay   /* put together the new matrix */
15849b5e25fSSatish Balay   ierr = MatCreateSeqSBAIJ(A->comm,bs,bs*mbs,bs*mbs,0,PETSC_NULL,B);CHKERRQ(ierr);
1593d840bdaSHong Zhang   /* PLogObjectParent(*B,iperm); */
16049b5e25fSSatish Balay   b = (Mat_SeqSBAIJ*)(*B)->data;
16149b5e25fSSatish Balay   ierr = PetscFree(b->imax);CHKERRQ(ierr);
16249b5e25fSSatish Balay   b->singlemalloc = PETSC_FALSE;
16349b5e25fSSatish Balay   /* the next line frees the default space generated by the Create() */
16449b5e25fSSatish Balay   ierr = PetscFree(b->a);CHKERRQ(ierr);
16549b5e25fSSatish Balay   ierr = PetscFree(b->ilen);CHKERRQ(ierr);
16649b5e25fSSatish Balay   b->a          = (MatScalar*)PetscMalloc((iu[mbs]+1)*sizeof(MatScalar)*bs2);CHKPTRQ(b->a);
16749b5e25fSSatish Balay   b->j          = ju;
16849b5e25fSSatish Balay   b->i          = iu;
16949b5e25fSSatish Balay   b->diag       = 0;
17049b5e25fSSatish Balay   b->ilen       = 0;
17149b5e25fSSatish Balay   b->imax       = 0;
17277f73120SHong Zhang   b->row        = perm;
17377f73120SHong Zhang   ierr          = PetscObjectReference((PetscObject)perm);CHKERRQ(ierr);
174cb718733SHong Zhang   b->icol       = perm;
175cb718733SHong Zhang   ierr          = PetscObjectReference((PetscObject)perm);CHKERRQ(ierr);
17649b5e25fSSatish Balay   b->solve_work = (Scalar*)PetscMalloc((bs*mbs+bs)*sizeof(Scalar));CHKPTRQ(b->solve_work);
17749b5e25fSSatish Balay   /* In b structure:  Free imax, ilen, old a, old j.
17849b5e25fSSatish Balay      Allocate idnew, solve_work, new a, new j */
17949b5e25fSSatish Balay   PLogObjectMemory(*B,(iu[mbs]-mbs)*(sizeof(int)+sizeof(MatScalar)));
18049b5e25fSSatish Balay   b->s_maxnz = b->s_nz = iu[mbs];
18149b5e25fSSatish Balay 
1825c0bcdfcSHong Zhang   (*B)->factor                 = FACTOR_CHOLESKY;
18349b5e25fSSatish Balay   (*B)->info.factor_mallocs    = realloc;
18449b5e25fSSatish Balay   (*B)->info.fill_ratio_given  = f;
18549b5e25fSSatish Balay   if (ai[mbs] != 0) {
18649b5e25fSSatish Balay     (*B)->info.fill_ratio_needed = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]);
18749b5e25fSSatish Balay   } else {
18849b5e25fSSatish Balay     (*B)->info.fill_ratio_needed = 0.0;
18949b5e25fSSatish Balay   }
1905c0bcdfcSHong Zhang #ifdef TEMP
1915c0bcdfcSHong Zhang   for (k=0; k<mbs; k++){
1925c0bcdfcSHong Zhang     nzk = b->i[k+1] - b->i[k];
1935c0bcdfcSHong Zhang     printf("\n b->i[%d]: %d, nzk: %d\n",k,b->i[k],nzk);
1945c0bcdfcSHong Zhang     jmin = b->i[k]; jmax = b->i[k+1];
1955c0bcdfcSHong Zhang     for (j=jmin; j<jmax; j++){
1965c0bcdfcSHong Zhang       printf(" %d,",b->j[j]);
1975c0bcdfcSHong Zhang     }
1985c0bcdfcSHong Zhang   }
1995c0bcdfcSHong Zhang #endif
20049b5e25fSSatish Balay   PetscFunctionReturn(0);
20149b5e25fSSatish Balay }
20249b5e25fSSatish Balay 
20349b5e25fSSatish Balay #undef __FUNC__
2046f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_N"
2056f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_N(Mat A,Mat *B)
20649b5e25fSSatish Balay {
20749b5e25fSSatish Balay   Mat                C = *B;
20849b5e25fSSatish Balay   Mat_SeqBAIJ        *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
20949b5e25fSSatish Balay   IS                 isrow = b->row,isicol = b->icol;
21049b5e25fSSatish Balay   int                *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
21149b5e25fSSatish Balay   int                *ajtmpold,*ajtmp,nz,row,bslog,*ai=a->i,*aj=a->j,k,flg;
21249b5e25fSSatish Balay   int                *diag_offset=b->diag,diag,bs=a->bs,bs2 = a->bs2,*v_pivots,*pj;
21349b5e25fSSatish Balay   MatScalar          *ba = b->a,*aa = a->a,*pv,*v,*rtmp,*multiplier,*v_work,*pc,*w;
21449b5e25fSSatish Balay 
21549b5e25fSSatish Balay   PetscFunctionBegin;
21649b5e25fSSatish Balay   ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr);
21749b5e25fSSatish Balay   ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr);
21849b5e25fSSatish Balay   rtmp = (MatScalar*)PetscMalloc(bs2*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
21949b5e25fSSatish Balay   ierr = PetscMemzero(rtmp,bs2*(n+1)*sizeof(MatScalar));CHKERRQ(ierr);
22049b5e25fSSatish Balay   /* generate work space needed by dense LU factorization */
22149b5e25fSSatish Balay   v_work     = (MatScalar*)PetscMalloc(bs*sizeof(int) + (bs+bs2)*sizeof(MatScalar));CHKPTRQ(v_work);
22249b5e25fSSatish Balay   multiplier = v_work + bs;
22349b5e25fSSatish Balay   v_pivots   = (int*)(multiplier + bs2);
22449b5e25fSSatish Balay 
22549b5e25fSSatish Balay   /* flops in while loop */
22649b5e25fSSatish Balay   bslog = 2*bs*bs2;
22749b5e25fSSatish Balay 
22849b5e25fSSatish Balay   for (i=0; i<n; i++) {
22949b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
23049b5e25fSSatish Balay     ajtmp = bj + bi[i];
23149b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
23249b5e25fSSatish Balay       ierr = PetscMemzero(rtmp+bs2*ajtmp[j],bs2*sizeof(MatScalar));CHKERRQ(ierr);
23349b5e25fSSatish Balay     }
23449b5e25fSSatish Balay     /* load in initial (unfactored row) */
23549b5e25fSSatish Balay     nz       = ai[r[i]+1] - ai[r[i]];
23649b5e25fSSatish Balay     ajtmpold = aj + ai[r[i]];
23749b5e25fSSatish Balay     v        = aa + bs2*ai[r[i]];
23849b5e25fSSatish Balay     for (j=0; j<nz; j++) {
23949b5e25fSSatish Balay       ierr = PetscMemcpy(rtmp+bs2*ic[ajtmpold[j]],v+bs2*j,bs2*sizeof(MatScalar));CHKERRQ(ierr);
24049b5e25fSSatish Balay     }
24149b5e25fSSatish Balay     row = *ajtmp++;
24249b5e25fSSatish Balay     while (row < i) {
24349b5e25fSSatish Balay       pc = rtmp + bs2*row;
24449b5e25fSSatish Balay /*      if (*pc) { */
24549b5e25fSSatish Balay       for (flg=0,k=0; k<bs2; k++) { if (pc[k]!=0.0) { flg =1; break; }}
24649b5e25fSSatish Balay       if (flg) {
24749b5e25fSSatish Balay         pv = ba + bs2*diag_offset[row];
24849b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
24949b5e25fSSatish Balay         Kernel_A_gets_A_times_B(bs,pc,pv,multiplier);
25049b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
25149b5e25fSSatish Balay         pv += bs2;
25249b5e25fSSatish Balay         for (j=0; j<nz; j++) {
25349b5e25fSSatish Balay           Kernel_A_gets_A_minus_B_times_C(bs,rtmp+bs2*pj[j],pc,pv+bs2*j);
25449b5e25fSSatish Balay         }
25549b5e25fSSatish Balay         PLogFlops(bslog*(nz+1)-bs);
25649b5e25fSSatish Balay       }
25749b5e25fSSatish Balay         row = *ajtmp++;
25849b5e25fSSatish Balay     }
25949b5e25fSSatish Balay     /* finished row so stick it into b->a */
26049b5e25fSSatish Balay     pv = ba + bs2*bi[i];
26149b5e25fSSatish Balay     pj = bj + bi[i];
26249b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
26349b5e25fSSatish Balay     for (j=0; j<nz; j++) {
26449b5e25fSSatish Balay       ierr = PetscMemcpy(pv+bs2*j,rtmp+bs2*pj[j],bs2*sizeof(MatScalar));CHKERRQ(ierr);
26549b5e25fSSatish Balay     }
26649b5e25fSSatish Balay     diag = diag_offset[i] - bi[i];
26749b5e25fSSatish Balay     /* invert diagonal block */
26849b5e25fSSatish Balay     w = pv + bs2*diag;
26949b5e25fSSatish Balay     Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work);
27049b5e25fSSatish Balay   }
27149b5e25fSSatish Balay 
27249b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
27349b5e25fSSatish Balay   ierr = PetscFree(v_work);CHKERRQ(ierr);
27449b5e25fSSatish Balay   ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr);
27549b5e25fSSatish Balay   ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr);
27649b5e25fSSatish Balay   C->factor = FACTOR_LU;
27749b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
27849b5e25fSSatish Balay   PLogFlops(1.3333*bs*bs2*b->mbs); /* from inverting diagonal blocks */
27949b5e25fSSatish Balay   PetscFunctionReturn(0);
28049b5e25fSSatish Balay }
281d4edadd4SHong Zhang 
28249b5e25fSSatish Balay /*
28349b5e25fSSatish Balay       Version for when blocks are 7 by 7
28449b5e25fSSatish Balay */
28549b5e25fSSatish Balay #undef __FUNC__
2866f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7"
2876f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7(Mat A,Mat *B)
28849b5e25fSSatish Balay {
28949b5e25fSSatish Balay   Mat         C = *B;
29049b5e25fSSatish Balay   Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
29149b5e25fSSatish Balay   IS          isrow = b->row,isicol = b->icol;
29249b5e25fSSatish Balay   int         *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
29349b5e25fSSatish Balay   int         *ajtmpold,*ajtmp,nz,row;
29449b5e25fSSatish Balay   int         *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj;
29549b5e25fSSatish Balay   MatScalar   *pv,*v,*rtmp,*pc,*w,*x;
29649b5e25fSSatish Balay   MatScalar   p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4;
29749b5e25fSSatish Balay   MatScalar   p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16;
29849b5e25fSSatish Balay   MatScalar   x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14;
29949b5e25fSSatish Balay   MatScalar   p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12;
30049b5e25fSSatish Balay   MatScalar   m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25;
30149b5e25fSSatish Balay   MatScalar   p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36;
30249b5e25fSSatish Balay   MatScalar   p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49;
30349b5e25fSSatish Balay   MatScalar   x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36;
30449b5e25fSSatish Balay   MatScalar   x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49;
30549b5e25fSSatish Balay   MatScalar   m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36;
30649b5e25fSSatish Balay   MatScalar   m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49;
30749b5e25fSSatish Balay   MatScalar   *ba = b->a,*aa = a->a;
30849b5e25fSSatish Balay 
30949b5e25fSSatish Balay   PetscFunctionBegin;
31049b5e25fSSatish Balay   ierr  = ISGetIndices(isrow,&r);CHKERRQ(ierr);
31149b5e25fSSatish Balay   ierr  = ISGetIndices(isicol,&ic);CHKERRQ(ierr);
31249b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
31349b5e25fSSatish Balay 
31449b5e25fSSatish Balay   for (i=0; i<n; i++) {
31549b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
31649b5e25fSSatish Balay     ajtmp = bj + bi[i];
31749b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
31849b5e25fSSatish Balay       x = rtmp+49*ajtmp[j];
31949b5e25fSSatish Balay       x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0;
32049b5e25fSSatish Balay       x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0;
32149b5e25fSSatish Balay       x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ;
32249b5e25fSSatish Balay       x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ;
32349b5e25fSSatish Balay       x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ;
32449b5e25fSSatish Balay       x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ;
32549b5e25fSSatish Balay     }
32649b5e25fSSatish Balay     /* load in initial (unfactored row) */
32749b5e25fSSatish Balay     idx      = r[i];
32849b5e25fSSatish Balay     nz       = ai[idx+1] - ai[idx];
32949b5e25fSSatish Balay     ajtmpold = aj + ai[idx];
33049b5e25fSSatish Balay     v        = aa + 49*ai[idx];
33149b5e25fSSatish Balay     for (j=0; j<nz; j++) {
33249b5e25fSSatish Balay       x    = rtmp+49*ic[ajtmpold[j]];
33349b5e25fSSatish Balay       x[0] =  v[0];  x[1] =  v[1];  x[2] =  v[2];  x[3] =  v[3];
33449b5e25fSSatish Balay       x[4] =  v[4];  x[5] =  v[5];  x[6] =  v[6];  x[7] =  v[7];
33549b5e25fSSatish Balay       x[8] =  v[8];  x[9] =  v[9];  x[10] = v[10]; x[11] = v[11];
33649b5e25fSSatish Balay       x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15];
33749b5e25fSSatish Balay       x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19];
33849b5e25fSSatish Balay       x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23];
33949b5e25fSSatish Balay       x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27];
34049b5e25fSSatish Balay       x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31];
34149b5e25fSSatish Balay       x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35];
34249b5e25fSSatish Balay       x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39];
34349b5e25fSSatish Balay       x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43];
34449b5e25fSSatish Balay       x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47];
34549b5e25fSSatish Balay       x[48] = v[48];
34649b5e25fSSatish Balay       v    += 49;
34749b5e25fSSatish Balay     }
34849b5e25fSSatish Balay     row = *ajtmp++;
34949b5e25fSSatish Balay     while (row < i) {
35049b5e25fSSatish Balay       pc  =  rtmp + 49*row;
35149b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
35249b5e25fSSatish Balay       p5  = pc[4];  p6  = pc[5];  p7  = pc[6];  p8  = pc[7];
35349b5e25fSSatish Balay       p9  = pc[8];  p10 = pc[9];  p11 = pc[10]; p12 = pc[11];
35449b5e25fSSatish Balay       p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15];
35549b5e25fSSatish Balay       p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19];
35649b5e25fSSatish Balay       p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23];
35749b5e25fSSatish Balay       p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27];
35849b5e25fSSatish Balay       p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31];
35949b5e25fSSatish Balay       p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35];
36049b5e25fSSatish Balay       p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39];
36149b5e25fSSatish Balay       p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43];
36249b5e25fSSatish Balay       p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47];
36349b5e25fSSatish Balay       p49 = pc[48];
36449b5e25fSSatish Balay       if (p1  != 0.0 || p2  != 0.0 || p3  != 0.0 || p4  != 0.0 ||
36549b5e25fSSatish Balay           p5  != 0.0 || p6  != 0.0 || p7  != 0.0 || p8  != 0.0 ||
36649b5e25fSSatish Balay           p9  != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 ||
36749b5e25fSSatish Balay           p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 ||
36849b5e25fSSatish Balay           p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 ||
36949b5e25fSSatish Balay           p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 ||
37049b5e25fSSatish Balay           p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 ||
37149b5e25fSSatish Balay           p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 ||
37249b5e25fSSatish Balay           p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 ||
37349b5e25fSSatish Balay           p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 ||
37449b5e25fSSatish Balay           p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 ||
37549b5e25fSSatish Balay           p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 ||
37649b5e25fSSatish Balay           p49 != 0.0) {
37749b5e25fSSatish Balay         pv = ba + 49*diag_offset[row];
37849b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
37949b5e25fSSatish Balay 	x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
38049b5e25fSSatish Balay 	x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
38149b5e25fSSatish Balay 	x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
38249b5e25fSSatish Balay 	x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
38349b5e25fSSatish Balay 	x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
38449b5e25fSSatish Balay 	x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
38549b5e25fSSatish Balay 	x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
38649b5e25fSSatish Balay 	x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
38749b5e25fSSatish Balay 	x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
38849b5e25fSSatish Balay 	x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39];
38949b5e25fSSatish Balay 	x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43];
39049b5e25fSSatish Balay 	x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47];
39149b5e25fSSatish Balay 	x49 = pv[48];
39249b5e25fSSatish Balay         pc[0]  = m1  = p1*x1  + p8*x2   + p15*x3  + p22*x4  + p29*x5  + p36*x6 + p43*x7;
39349b5e25fSSatish Balay         pc[1]  = m2  = p2*x1  + p9*x2   + p16*x3  + p23*x4  + p30*x5  + p37*x6 + p44*x7;
39449b5e25fSSatish Balay         pc[2]  = m3  = p3*x1  + p10*x2  + p17*x3  + p24*x4  + p31*x5  + p38*x6 + p45*x7;
39549b5e25fSSatish Balay         pc[3]  = m4  = p4*x1  + p11*x2  + p18*x3  + p25*x4  + p32*x5  + p39*x6 + p46*x7;
39649b5e25fSSatish Balay         pc[4]  = m5  = p5*x1  + p12*x2  + p19*x3  + p26*x4  + p33*x5  + p40*x6 + p47*x7;
39749b5e25fSSatish Balay         pc[5]  = m6  = p6*x1  + p13*x2  + p20*x3  + p27*x4  + p34*x5  + p41*x6 + p48*x7;
39849b5e25fSSatish Balay         pc[6]  = m7  = p7*x1  + p14*x2  + p21*x3  + p28*x4  + p35*x5  + p42*x6 + p49*x7;
39949b5e25fSSatish Balay 
40049b5e25fSSatish Balay         pc[7]  = m8  = p1*x8  + p8*x9   + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14;
40149b5e25fSSatish Balay         pc[8]  = m9  = p2*x8  + p9*x9   + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14;
40249b5e25fSSatish Balay         pc[9]  = m10 = p3*x8  + p10*x9  + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14;
40349b5e25fSSatish Balay         pc[10] = m11 = p4*x8  + p11*x9  + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14;
40449b5e25fSSatish Balay         pc[11] = m12 = p5*x8  + p12*x9  + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14;
40549b5e25fSSatish Balay         pc[12] = m13 = p6*x8  + p13*x9  + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14;
40649b5e25fSSatish Balay         pc[13] = m14 = p7*x8  + p14*x9  + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14;
40749b5e25fSSatish Balay 
40849b5e25fSSatish Balay         pc[14] = m15 = p1*x15 + p8*x16  + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21;
40949b5e25fSSatish Balay         pc[15] = m16 = p2*x15 + p9*x16  + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21;
41049b5e25fSSatish Balay         pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21;
41149b5e25fSSatish Balay         pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21;
41249b5e25fSSatish Balay         pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21;
41349b5e25fSSatish Balay         pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21;
41449b5e25fSSatish Balay         pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21;
41549b5e25fSSatish Balay 
41649b5e25fSSatish Balay         pc[21] = m22 = p1*x22 + p8*x23  + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28;
41749b5e25fSSatish Balay         pc[22] = m23 = p2*x22 + p9*x23  + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28;
41849b5e25fSSatish Balay         pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28;
41949b5e25fSSatish Balay         pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28;
42049b5e25fSSatish Balay         pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28;
42149b5e25fSSatish Balay         pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28;
42249b5e25fSSatish Balay         pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28;
42349b5e25fSSatish Balay 
42449b5e25fSSatish Balay         pc[28] = m29 = p1*x29 + p8*x30  + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35;
42549b5e25fSSatish Balay         pc[29] = m30 = p2*x29 + p9*x30  + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35;
42649b5e25fSSatish Balay         pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35;
42749b5e25fSSatish Balay         pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35;
42849b5e25fSSatish Balay         pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35;
42949b5e25fSSatish Balay         pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35;
43049b5e25fSSatish Balay         pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35;
43149b5e25fSSatish Balay 
43249b5e25fSSatish Balay         pc[35] = m36 = p1*x36 + p8*x37  + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42;
43349b5e25fSSatish Balay         pc[36] = m37 = p2*x36 + p9*x37  + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42;
43449b5e25fSSatish Balay         pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42;
43549b5e25fSSatish Balay         pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42;
43649b5e25fSSatish Balay         pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42;
43749b5e25fSSatish Balay         pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42;
43849b5e25fSSatish Balay         pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42;
43949b5e25fSSatish Balay 
44049b5e25fSSatish Balay         pc[42] = m43 = p1*x43 + p8*x44  + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49;
44149b5e25fSSatish Balay         pc[43] = m44 = p2*x43 + p9*x44  + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49;
44249b5e25fSSatish Balay         pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49;
44349b5e25fSSatish Balay         pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49;
44449b5e25fSSatish Balay         pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49;
44549b5e25fSSatish Balay         pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49;
44649b5e25fSSatish Balay         pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49;
44749b5e25fSSatish Balay 
44849b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
44949b5e25fSSatish Balay         pv += 49;
45049b5e25fSSatish Balay         for (j=0; j<nz; j++) {
45149b5e25fSSatish Balay 	  x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
45249b5e25fSSatish Balay 	  x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
45349b5e25fSSatish Balay 	  x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
45449b5e25fSSatish Balay 	  x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
45549b5e25fSSatish Balay 	  x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
45649b5e25fSSatish Balay 	  x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
45749b5e25fSSatish Balay 	  x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
45849b5e25fSSatish Balay 	  x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
45949b5e25fSSatish Balay 	  x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
46049b5e25fSSatish Balay 	  x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39];
46149b5e25fSSatish Balay 	  x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43];
46249b5e25fSSatish Balay 	  x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47];
46349b5e25fSSatish Balay 	  x49 = pv[48];
46449b5e25fSSatish Balay 	  x    = rtmp + 49*pj[j];
46549b5e25fSSatish Balay 	  x[0]  -= m1*x1  + m8*x2   + m15*x3  + m22*x4  + m29*x5  + m36*x6 + m43*x7;
46649b5e25fSSatish Balay 	  x[1]  -= m2*x1  + m9*x2   + m16*x3  + m23*x4  + m30*x5  + m37*x6 + m44*x7;
46749b5e25fSSatish Balay 	  x[2]  -= m3*x1  + m10*x2  + m17*x3  + m24*x4  + m31*x5  + m38*x6 + m45*x7;
46849b5e25fSSatish Balay 	  x[3]  -= m4*x1  + m11*x2  + m18*x3  + m25*x4  + m32*x5  + m39*x6 + m46*x7;
46949b5e25fSSatish Balay 	  x[4]  -= m5*x1  + m12*x2  + m19*x3  + m26*x4  + m33*x5  + m40*x6 + m47*x7;
47049b5e25fSSatish Balay 	  x[5]  -= m6*x1  + m13*x2  + m20*x3  + m27*x4  + m34*x5  + m41*x6 + m48*x7;
47149b5e25fSSatish Balay 	  x[6]  -= m7*x1  + m14*x2  + m21*x3  + m28*x4  + m35*x5  + m42*x6 + m49*x7;
47249b5e25fSSatish Balay 
47349b5e25fSSatish Balay 	  x[7]  -= m1*x8  + m8*x9   + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14;
47449b5e25fSSatish Balay 	  x[8]  -= m2*x8  + m9*x9   + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14;
47549b5e25fSSatish Balay 	  x[9]  -= m3*x8  + m10*x9  + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14;
47649b5e25fSSatish Balay 	  x[10] -= m4*x8  + m11*x9  + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14;
47749b5e25fSSatish Balay 	  x[11] -= m5*x8  + m12*x9  + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14;
47849b5e25fSSatish Balay 	  x[12] -= m6*x8  + m13*x9  + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14;
47949b5e25fSSatish Balay 	  x[13] -= m7*x8  + m14*x9  + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14;
48049b5e25fSSatish Balay 
48149b5e25fSSatish Balay 	  x[14] -= m1*x15 + m8*x16  + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21;
48249b5e25fSSatish Balay 	  x[15] -= m2*x15 + m9*x16  + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21;
48349b5e25fSSatish Balay 	  x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21;
48449b5e25fSSatish Balay 	  x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21;
48549b5e25fSSatish Balay 	  x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21;
48649b5e25fSSatish Balay 	  x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21;
48749b5e25fSSatish Balay 	  x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21;
48849b5e25fSSatish Balay 
48949b5e25fSSatish Balay 	  x[21] -= m1*x22 + m8*x23  + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28;
49049b5e25fSSatish Balay 	  x[22] -= m2*x22 + m9*x23  + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28;
49149b5e25fSSatish Balay 	  x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28;
49249b5e25fSSatish Balay 	  x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28;
49349b5e25fSSatish Balay 	  x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28;
49449b5e25fSSatish Balay 	  x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28;
49549b5e25fSSatish Balay 	  x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28;
49649b5e25fSSatish Balay 
49749b5e25fSSatish Balay 	  x[28] -= m1*x29 + m8*x30  + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35;
49849b5e25fSSatish Balay 	  x[29] -= m2*x29 + m9*x30  + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35;
49949b5e25fSSatish Balay 	  x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35;
50049b5e25fSSatish Balay 	  x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35;
50149b5e25fSSatish Balay 	  x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35;
50249b5e25fSSatish Balay 	  x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35;
50349b5e25fSSatish Balay 	  x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35;
50449b5e25fSSatish Balay 
50549b5e25fSSatish Balay 	  x[35] -= m1*x36 + m8*x37  + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42;
50649b5e25fSSatish Balay 	  x[36] -= m2*x36 + m9*x37  + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42;
50749b5e25fSSatish Balay 	  x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42;
50849b5e25fSSatish Balay 	  x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42;
50949b5e25fSSatish Balay 	  x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42;
51049b5e25fSSatish Balay 	  x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42;
51149b5e25fSSatish Balay 	  x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42;
51249b5e25fSSatish Balay 
51349b5e25fSSatish Balay 	  x[42] -= m1*x43 + m8*x44  + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49;
51449b5e25fSSatish Balay 	  x[43] -= m2*x43 + m9*x44  + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49;
51549b5e25fSSatish Balay 	  x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49;
51649b5e25fSSatish Balay 	  x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49;
51749b5e25fSSatish Balay 	  x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49;
51849b5e25fSSatish Balay 	  x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49;
51949b5e25fSSatish Balay 	  x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49;
52049b5e25fSSatish Balay           pv   += 49;
52149b5e25fSSatish Balay         }
52249b5e25fSSatish Balay         PLogFlops(686*nz+637);
52349b5e25fSSatish Balay       }
52449b5e25fSSatish Balay       row = *ajtmp++;
52549b5e25fSSatish Balay     }
52649b5e25fSSatish Balay     /* finished row so stick it into b->a */
52749b5e25fSSatish Balay     pv = ba + 49*bi[i];
52849b5e25fSSatish Balay     pj = bj + bi[i];
52949b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
53049b5e25fSSatish Balay     for (j=0; j<nz; j++) {
53149b5e25fSSatish Balay       x      = rtmp+49*pj[j];
53249b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
53349b5e25fSSatish Balay       pv[4]  = x[4];  pv[5]  = x[5];  pv[6]  = x[6];  pv[7]  = x[7];
53449b5e25fSSatish Balay       pv[8]  = x[8];  pv[9]  = x[9];  pv[10] = x[10]; pv[11] = x[11];
53549b5e25fSSatish Balay       pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15];
53649b5e25fSSatish Balay       pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19];
53749b5e25fSSatish Balay       pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23];
53849b5e25fSSatish Balay       pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27];
53949b5e25fSSatish Balay       pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31];
54049b5e25fSSatish Balay       pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35];
54149b5e25fSSatish Balay       pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39];
54249b5e25fSSatish Balay       pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43];
54349b5e25fSSatish Balay       pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47];
54449b5e25fSSatish Balay       pv[48] = x[48];
54549b5e25fSSatish Balay       pv   += 49;
54649b5e25fSSatish Balay     }
54749b5e25fSSatish Balay     /* invert diagonal block */
54849b5e25fSSatish Balay     w = ba + 49*diag_offset[i];
54949b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr);
55049b5e25fSSatish Balay   }
55149b5e25fSSatish Balay 
55249b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
55349b5e25fSSatish Balay   ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr);
55449b5e25fSSatish Balay   ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr);
55549b5e25fSSatish Balay   C->factor = FACTOR_LU;
55649b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
55749b5e25fSSatish Balay   PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */
55849b5e25fSSatish Balay   PetscFunctionReturn(0);
55949b5e25fSSatish Balay }
56049b5e25fSSatish Balay 
56149b5e25fSSatish Balay /*
56249b5e25fSSatish Balay       Version for when blocks are 7 by 7 Using natural ordering
56349b5e25fSSatish Balay */
56449b5e25fSSatish Balay #undef __FUNC__
5656f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering"
5666f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering(Mat A,Mat *B)
56749b5e25fSSatish Balay {
56849b5e25fSSatish Balay   Mat          C = *B;
56949b5e25fSSatish Balay   Mat_SeqBAIJ  *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
57049b5e25fSSatish Balay   int          ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
57149b5e25fSSatish Balay   int          *ajtmpold,*ajtmp,nz,row;
57249b5e25fSSatish Balay   int          *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj;
57349b5e25fSSatish Balay   MatScalar    *pv,*v,*rtmp,*pc,*w,*x;
57449b5e25fSSatish Balay   MatScalar    x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15;
57549b5e25fSSatish Balay   MatScalar    x16,x17,x18,x19,x20,x21,x22,x23,x24,x25;
57649b5e25fSSatish Balay   MatScalar    p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15;
57749b5e25fSSatish Balay   MatScalar    p16,p17,p18,p19,p20,p21,p22,p23,p24,p25;
57849b5e25fSSatish Balay   MatScalar    m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15;
57949b5e25fSSatish Balay   MatScalar    m16,m17,m18,m19,m20,m21,m22,m23,m24,m25;
58049b5e25fSSatish Balay   MatScalar    p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36;
58149b5e25fSSatish Balay   MatScalar    p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49;
58249b5e25fSSatish Balay   MatScalar    x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36;
58349b5e25fSSatish Balay   MatScalar    x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49;
58449b5e25fSSatish Balay   MatScalar    m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36;
58549b5e25fSSatish Balay   MatScalar    m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49;
58649b5e25fSSatish Balay   MatScalar    *ba = b->a,*aa = a->a;
58749b5e25fSSatish Balay 
58849b5e25fSSatish Balay   PetscFunctionBegin;
58949b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
59049b5e25fSSatish Balay   for (i=0; i<n; i++) {
59149b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
59249b5e25fSSatish Balay     ajtmp = bj + bi[i];
59349b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
59449b5e25fSSatish Balay       x = rtmp+49*ajtmp[j];
59549b5e25fSSatish Balay       x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0;
59649b5e25fSSatish Balay       x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0;
59749b5e25fSSatish Balay       x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ;
59849b5e25fSSatish Balay       x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ;
59949b5e25fSSatish Balay       x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ;
60049b5e25fSSatish Balay       x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ;
60149b5e25fSSatish Balay     }
60249b5e25fSSatish Balay     /* load in initial (unfactored row) */
60349b5e25fSSatish Balay     nz       = ai[i+1] - ai[i];
60449b5e25fSSatish Balay     ajtmpold = aj + ai[i];
60549b5e25fSSatish Balay     v        = aa + 49*ai[i];
60649b5e25fSSatish Balay     for (j=0; j<nz; j++) {
60749b5e25fSSatish Balay       x    = rtmp+49*ajtmpold[j];
60849b5e25fSSatish Balay       x[0] =  v[0];  x[1] =  v[1];  x[2] =  v[2];  x[3] =  v[3];
60949b5e25fSSatish Balay       x[4] =  v[4];  x[5] =  v[5];  x[6] =  v[6];  x[7] =  v[7];
61049b5e25fSSatish Balay       x[8] =  v[8];  x[9] =  v[9];  x[10] = v[10]; x[11] = v[11];
61149b5e25fSSatish Balay       x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15];
61249b5e25fSSatish Balay       x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19];
61349b5e25fSSatish Balay       x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23];
61449b5e25fSSatish Balay       x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27];
61549b5e25fSSatish Balay       x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31];
61649b5e25fSSatish Balay       x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35];
61749b5e25fSSatish Balay       x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39];
61849b5e25fSSatish Balay       x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43];
61949b5e25fSSatish Balay       x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47];
62049b5e25fSSatish Balay       x[48] = v[48];
62149b5e25fSSatish Balay       v    += 49;
62249b5e25fSSatish Balay     }
62349b5e25fSSatish Balay     row = *ajtmp++;
62449b5e25fSSatish Balay     while (row < i) {
62549b5e25fSSatish Balay       pc  = rtmp + 49*row;
62649b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
62749b5e25fSSatish Balay       p5  = pc[4];  p6  = pc[5];  p7  = pc[6];  p8  = pc[7];
62849b5e25fSSatish Balay       p9  = pc[8];  p10 = pc[9];  p11 = pc[10]; p12 = pc[11];
62949b5e25fSSatish Balay       p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15];
63049b5e25fSSatish Balay       p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19];
63149b5e25fSSatish Balay       p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23];
63249b5e25fSSatish Balay       p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27];
63349b5e25fSSatish Balay       p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31];
63449b5e25fSSatish Balay       p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35];
63549b5e25fSSatish Balay       p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39];
63649b5e25fSSatish Balay       p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43];
63749b5e25fSSatish Balay       p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47];
63849b5e25fSSatish Balay       p49 = pc[48];
63949b5e25fSSatish Balay       if (p1  != 0.0 || p2  != 0.0 || p3  != 0.0 || p4  != 0.0 ||
64049b5e25fSSatish Balay           p5  != 0.0 || p6  != 0.0 || p7  != 0.0 || p8  != 0.0 ||
64149b5e25fSSatish Balay           p9  != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 ||
64249b5e25fSSatish Balay           p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 ||
64349b5e25fSSatish Balay           p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 ||
64449b5e25fSSatish Balay           p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 ||
64549b5e25fSSatish Balay           p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 ||
64649b5e25fSSatish Balay           p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 ||
64749b5e25fSSatish Balay           p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 ||
64849b5e25fSSatish Balay           p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 ||
64949b5e25fSSatish Balay           p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 ||
65049b5e25fSSatish Balay           p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 ||
65149b5e25fSSatish Balay           p49 != 0.0) {
65249b5e25fSSatish Balay         pv = ba + 49*diag_offset[row];
65349b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
65449b5e25fSSatish Balay 	x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
65549b5e25fSSatish Balay 	x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
65649b5e25fSSatish Balay 	x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
65749b5e25fSSatish Balay 	x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
65849b5e25fSSatish Balay 	x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
65949b5e25fSSatish Balay 	x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
66049b5e25fSSatish Balay 	x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
66149b5e25fSSatish Balay 	x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
66249b5e25fSSatish Balay 	x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
66349b5e25fSSatish Balay 	x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39];
66449b5e25fSSatish Balay 	x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43];
66549b5e25fSSatish Balay 	x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47];
66649b5e25fSSatish Balay         x49 = pv[48];
66749b5e25fSSatish Balay         pc[0]  = m1  = p1*x1  + p8*x2   + p15*x3  + p22*x4  + p29*x5  + p36*x6 + p43*x7;
66849b5e25fSSatish Balay         pc[1]  = m2  = p2*x1  + p9*x2   + p16*x3  + p23*x4  + p30*x5  + p37*x6 + p44*x7;
66949b5e25fSSatish Balay         pc[2]  = m3  = p3*x1  + p10*x2  + p17*x3  + p24*x4  + p31*x5  + p38*x6 + p45*x7;
67049b5e25fSSatish Balay         pc[3]  = m4  = p4*x1  + p11*x2  + p18*x3  + p25*x4  + p32*x5  + p39*x6 + p46*x7;
67149b5e25fSSatish Balay         pc[4]  = m5  = p5*x1  + p12*x2  + p19*x3  + p26*x4  + p33*x5  + p40*x6 + p47*x7;
67249b5e25fSSatish Balay         pc[5]  = m6  = p6*x1  + p13*x2  + p20*x3  + p27*x4  + p34*x5  + p41*x6 + p48*x7;
67349b5e25fSSatish Balay         pc[6]  = m7  = p7*x1  + p14*x2  + p21*x3  + p28*x4  + p35*x5  + p42*x6 + p49*x7;
67449b5e25fSSatish Balay 
67549b5e25fSSatish Balay         pc[7]  = m8  = p1*x8  + p8*x9   + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14;
67649b5e25fSSatish Balay         pc[8]  = m9  = p2*x8  + p9*x9   + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14;
67749b5e25fSSatish Balay         pc[9]  = m10 = p3*x8  + p10*x9  + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14;
67849b5e25fSSatish Balay         pc[10] = m11 = p4*x8  + p11*x9  + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14;
67949b5e25fSSatish Balay         pc[11] = m12 = p5*x8  + p12*x9  + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14;
68049b5e25fSSatish Balay         pc[12] = m13 = p6*x8  + p13*x9  + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14;
68149b5e25fSSatish Balay         pc[13] = m14 = p7*x8  + p14*x9  + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14;
68249b5e25fSSatish Balay 
68349b5e25fSSatish Balay         pc[14] = m15 = p1*x15 + p8*x16  + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21;
68449b5e25fSSatish Balay         pc[15] = m16 = p2*x15 + p9*x16  + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21;
68549b5e25fSSatish Balay         pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21;
68649b5e25fSSatish Balay         pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21;
68749b5e25fSSatish Balay         pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21;
68849b5e25fSSatish Balay         pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21;
68949b5e25fSSatish Balay         pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21;
69049b5e25fSSatish Balay 
69149b5e25fSSatish Balay         pc[21] = m22 = p1*x22 + p8*x23  + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28;
69249b5e25fSSatish Balay         pc[22] = m23 = p2*x22 + p9*x23  + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28;
69349b5e25fSSatish Balay         pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28;
69449b5e25fSSatish Balay         pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28;
69549b5e25fSSatish Balay         pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28;
69649b5e25fSSatish Balay         pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28;
69749b5e25fSSatish Balay         pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28;
69849b5e25fSSatish Balay 
69949b5e25fSSatish Balay         pc[28] = m29 = p1*x29 + p8*x30  + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35;
70049b5e25fSSatish Balay         pc[29] = m30 = p2*x29 + p9*x30  + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35;
70149b5e25fSSatish Balay         pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35;
70249b5e25fSSatish Balay         pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35;
70349b5e25fSSatish Balay         pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35;
70449b5e25fSSatish Balay         pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35;
70549b5e25fSSatish Balay         pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35;
70649b5e25fSSatish Balay 
70749b5e25fSSatish Balay         pc[35] = m36 = p1*x36 + p8*x37  + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42;
70849b5e25fSSatish Balay         pc[36] = m37 = p2*x36 + p9*x37  + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42;
70949b5e25fSSatish Balay         pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42;
71049b5e25fSSatish Balay         pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42;
71149b5e25fSSatish Balay         pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42;
71249b5e25fSSatish Balay         pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42;
71349b5e25fSSatish Balay         pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42;
71449b5e25fSSatish Balay 
71549b5e25fSSatish Balay         pc[42] = m43 = p1*x43 + p8*x44  + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49;
71649b5e25fSSatish Balay         pc[43] = m44 = p2*x43 + p9*x44  + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49;
71749b5e25fSSatish Balay         pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49;
71849b5e25fSSatish Balay         pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49;
71949b5e25fSSatish Balay         pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49;
72049b5e25fSSatish Balay         pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49;
72149b5e25fSSatish Balay         pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49;
72249b5e25fSSatish Balay 
72349b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
72449b5e25fSSatish Balay         pv += 49;
72549b5e25fSSatish Balay         for (j=0; j<nz; j++) {
72649b5e25fSSatish Balay 	  x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
72749b5e25fSSatish Balay 	  x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
72849b5e25fSSatish Balay 	  x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
72949b5e25fSSatish Balay 	  x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
73049b5e25fSSatish Balay 	  x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
73149b5e25fSSatish Balay 	  x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
73249b5e25fSSatish Balay 	  x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
73349b5e25fSSatish Balay 	  x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
73449b5e25fSSatish Balay 	  x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
73549b5e25fSSatish Balay 	  x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39];
73649b5e25fSSatish Balay 	  x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43];
73749b5e25fSSatish Balay 	  x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47];
73849b5e25fSSatish Balay 	  x49 = pv[48];
73949b5e25fSSatish Balay 	  x    = rtmp + 49*pj[j];
74049b5e25fSSatish Balay 	  x[0]  -= m1*x1  + m8*x2   + m15*x3  + m22*x4  + m29*x5  + m36*x6 + m43*x7;
74149b5e25fSSatish Balay 	  x[1]  -= m2*x1  + m9*x2   + m16*x3  + m23*x4  + m30*x5  + m37*x6 + m44*x7;
74249b5e25fSSatish Balay 	  x[2]  -= m3*x1  + m10*x2  + m17*x3  + m24*x4  + m31*x5  + m38*x6 + m45*x7;
74349b5e25fSSatish Balay 	  x[3]  -= m4*x1  + m11*x2  + m18*x3  + m25*x4  + m32*x5  + m39*x6 + m46*x7;
74449b5e25fSSatish Balay 	  x[4]  -= m5*x1  + m12*x2  + m19*x3  + m26*x4  + m33*x5  + m40*x6 + m47*x7;
74549b5e25fSSatish Balay 	  x[5]  -= m6*x1  + m13*x2  + m20*x3  + m27*x4  + m34*x5  + m41*x6 + m48*x7;
74649b5e25fSSatish Balay 	  x[6]  -= m7*x1  + m14*x2  + m21*x3  + m28*x4  + m35*x5  + m42*x6 + m49*x7;
74749b5e25fSSatish Balay 
74849b5e25fSSatish Balay 	  x[7]  -= m1*x8  + m8*x9   + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14;
74949b5e25fSSatish Balay 	  x[8]  -= m2*x8  + m9*x9   + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14;
75049b5e25fSSatish Balay 	  x[9]  -= m3*x8  + m10*x9  + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14;
75149b5e25fSSatish Balay 	  x[10] -= m4*x8  + m11*x9  + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14;
75249b5e25fSSatish Balay 	  x[11] -= m5*x8  + m12*x9  + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14;
75349b5e25fSSatish Balay 	  x[12] -= m6*x8  + m13*x9  + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14;
75449b5e25fSSatish Balay 	  x[13] -= m7*x8  + m14*x9  + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14;
75549b5e25fSSatish Balay 
75649b5e25fSSatish Balay 	  x[14] -= m1*x15 + m8*x16  + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21;
75749b5e25fSSatish Balay 	  x[15] -= m2*x15 + m9*x16  + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21;
75849b5e25fSSatish Balay 	  x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21;
75949b5e25fSSatish Balay 	  x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21;
76049b5e25fSSatish Balay 	  x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21;
76149b5e25fSSatish Balay 	  x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21;
76249b5e25fSSatish Balay 	  x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21;
76349b5e25fSSatish Balay 
76449b5e25fSSatish Balay 	  x[21] -= m1*x22 + m8*x23  + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28;
76549b5e25fSSatish Balay 	  x[22] -= m2*x22 + m9*x23  + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28;
76649b5e25fSSatish Balay 	  x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28;
76749b5e25fSSatish Balay 	  x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28;
76849b5e25fSSatish Balay 	  x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28;
76949b5e25fSSatish Balay 	  x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28;
77049b5e25fSSatish Balay 	  x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28;
77149b5e25fSSatish Balay 
77249b5e25fSSatish Balay 	  x[28] -= m1*x29 + m8*x30  + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35;
77349b5e25fSSatish Balay 	  x[29] -= m2*x29 + m9*x30  + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35;
77449b5e25fSSatish Balay 	  x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35;
77549b5e25fSSatish Balay 	  x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35;
77649b5e25fSSatish Balay 	  x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35;
77749b5e25fSSatish Balay 	  x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35;
77849b5e25fSSatish Balay 	  x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35;
77949b5e25fSSatish Balay 
78049b5e25fSSatish Balay 	  x[35] -= m1*x36 + m8*x37  + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42;
78149b5e25fSSatish Balay 	  x[36] -= m2*x36 + m9*x37  + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42;
78249b5e25fSSatish Balay 	  x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42;
78349b5e25fSSatish Balay 	  x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42;
78449b5e25fSSatish Balay 	  x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42;
78549b5e25fSSatish Balay 	  x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42;
78649b5e25fSSatish Balay 	  x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42;
78749b5e25fSSatish Balay 
78849b5e25fSSatish Balay 	  x[42] -= m1*x43 + m8*x44  + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49;
78949b5e25fSSatish Balay 	  x[43] -= m2*x43 + m9*x44  + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49;
79049b5e25fSSatish Balay 	  x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49;
79149b5e25fSSatish Balay 	  x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49;
79249b5e25fSSatish Balay 	  x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49;
79349b5e25fSSatish Balay 	  x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49;
79449b5e25fSSatish Balay 	  x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49;
79549b5e25fSSatish Balay           pv   += 49;
79649b5e25fSSatish Balay         }
79749b5e25fSSatish Balay         PLogFlops(686*nz+637);
79849b5e25fSSatish Balay       }
79949b5e25fSSatish Balay       row = *ajtmp++;
80049b5e25fSSatish Balay     }
80149b5e25fSSatish Balay     /* finished row so stick it into b->a */
80249b5e25fSSatish Balay     pv = ba + 49*bi[i];
80349b5e25fSSatish Balay     pj = bj + bi[i];
80449b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
80549b5e25fSSatish Balay     for (j=0; j<nz; j++) {
80649b5e25fSSatish Balay       x      = rtmp+49*pj[j];
80749b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
80849b5e25fSSatish Balay       pv[4]  = x[4];  pv[5]  = x[5];  pv[6]  = x[6];  pv[7]  = x[7];
80949b5e25fSSatish Balay       pv[8]  = x[8];  pv[9]  = x[9];  pv[10] = x[10]; pv[11] = x[11];
81049b5e25fSSatish Balay       pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15];
81149b5e25fSSatish Balay       pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19];
81249b5e25fSSatish Balay       pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23];
81349b5e25fSSatish Balay       pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27];
81449b5e25fSSatish Balay       pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31];
81549b5e25fSSatish Balay       pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35];
81649b5e25fSSatish Balay       pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39];
81749b5e25fSSatish Balay       pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43];
81849b5e25fSSatish Balay       pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47];
81949b5e25fSSatish Balay       pv[48] = x[48];
82049b5e25fSSatish Balay       pv   += 49;
82149b5e25fSSatish Balay     }
82249b5e25fSSatish Balay     /* invert diagonal block */
82349b5e25fSSatish Balay     w = ba + 49*diag_offset[i];
82449b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr);
82549b5e25fSSatish Balay   }
82649b5e25fSSatish Balay 
82749b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
82849b5e25fSSatish Balay   C->factor    = FACTOR_LU;
82949b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
83049b5e25fSSatish Balay   PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */
83149b5e25fSSatish Balay   PetscFunctionReturn(0);
83249b5e25fSSatish Balay }
83349b5e25fSSatish Balay 
83449b5e25fSSatish Balay /* ------------------------------------------------------------*/
83549b5e25fSSatish Balay /*
83649b5e25fSSatish Balay       Version for when blocks are 6 by 6
83749b5e25fSSatish Balay */
83849b5e25fSSatish Balay #undef __FUNC__
8396f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6"
8406f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6(Mat A,Mat *B)
84149b5e25fSSatish Balay {
84249b5e25fSSatish Balay   Mat          C = *B;
84349b5e25fSSatish Balay   Mat_SeqBAIJ  *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
84449b5e25fSSatish Balay   IS           isrow = b->row,isicol = b->icol;
84549b5e25fSSatish Balay   int          *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
84649b5e25fSSatish Balay   int          *ajtmpold,*ajtmp,nz,row;
84749b5e25fSSatish Balay   int          *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj;
84849b5e25fSSatish Balay   MatScalar    *pv,*v,*rtmp,*pc,*w,*x;
84949b5e25fSSatish Balay   MatScalar    p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4;
85049b5e25fSSatish Balay   MatScalar    p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16;
85149b5e25fSSatish Balay   MatScalar    x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14;
85249b5e25fSSatish Balay   MatScalar    p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12;
85349b5e25fSSatish Balay   MatScalar    m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25;
85449b5e25fSSatish Balay   MatScalar    p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36;
85549b5e25fSSatish Balay   MatScalar    x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36;
85649b5e25fSSatish Balay   MatScalar    m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36;
85749b5e25fSSatish Balay   MatScalar    *ba = b->a,*aa = a->a;
85849b5e25fSSatish Balay 
85949b5e25fSSatish Balay   PetscFunctionBegin;
86049b5e25fSSatish Balay   ierr  = ISGetIndices(isrow,&r);CHKERRQ(ierr);
86149b5e25fSSatish Balay   ierr  = ISGetIndices(isicol,&ic);CHKERRQ(ierr);
86249b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
86349b5e25fSSatish Balay 
86449b5e25fSSatish Balay   for (i=0; i<n; i++) {
86549b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
86649b5e25fSSatish Balay     ajtmp = bj + bi[i];
86749b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
86849b5e25fSSatish Balay       x = rtmp+36*ajtmp[j];
86949b5e25fSSatish Balay       x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0;
87049b5e25fSSatish Balay       x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0;
87149b5e25fSSatish Balay       x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ;
87249b5e25fSSatish Balay       x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ;
87349b5e25fSSatish Balay       x[34] = x[35] = 0.0 ;
87449b5e25fSSatish Balay     }
87549b5e25fSSatish Balay     /* load in initial (unfactored row) */
87649b5e25fSSatish Balay     idx      = r[i];
87749b5e25fSSatish Balay     nz       = ai[idx+1] - ai[idx];
87849b5e25fSSatish Balay     ajtmpold = aj + ai[idx];
87949b5e25fSSatish Balay     v        = aa + 36*ai[idx];
88049b5e25fSSatish Balay     for (j=0; j<nz; j++) {
88149b5e25fSSatish Balay       x    = rtmp+36*ic[ajtmpold[j]];
88249b5e25fSSatish Balay       x[0] =  v[0];  x[1] =  v[1];  x[2] =  v[2];  x[3] =  v[3];
88349b5e25fSSatish Balay       x[4] =  v[4];  x[5] =  v[5];  x[6] =  v[6];  x[7] =  v[7];
88449b5e25fSSatish Balay       x[8] =  v[8];  x[9] =  v[9];  x[10] = v[10]; x[11] = v[11];
88549b5e25fSSatish Balay       x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15];
88649b5e25fSSatish Balay       x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19];
88749b5e25fSSatish Balay       x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23];
88849b5e25fSSatish Balay       x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27];
88949b5e25fSSatish Balay       x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31];
89049b5e25fSSatish Balay       x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35];
89149b5e25fSSatish Balay       v    += 36;
89249b5e25fSSatish Balay     }
89349b5e25fSSatish Balay     row = *ajtmp++;
89449b5e25fSSatish Balay     while (row < i) {
89549b5e25fSSatish Balay       pc  =  rtmp + 36*row;
89649b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
89749b5e25fSSatish Balay       p5  = pc[4];  p6  = pc[5];  p7  = pc[6];  p8  = pc[7];
89849b5e25fSSatish Balay       p9  = pc[8];  p10 = pc[9];  p11 = pc[10]; p12 = pc[11];
89949b5e25fSSatish Balay       p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15];
90049b5e25fSSatish Balay       p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19];
90149b5e25fSSatish Balay       p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23];
90249b5e25fSSatish Balay       p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27];
90349b5e25fSSatish Balay       p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31];
90449b5e25fSSatish Balay       p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35];
90549b5e25fSSatish Balay       if (p1  != 0.0 || p2  != 0.0 || p3  != 0.0 || p4  != 0.0 ||
90649b5e25fSSatish Balay           p5  != 0.0 || p6  != 0.0 || p7  != 0.0 || p8  != 0.0 ||
90749b5e25fSSatish Balay           p9  != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 ||
90849b5e25fSSatish Balay           p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 ||
90949b5e25fSSatish Balay           p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 ||
91049b5e25fSSatish Balay           p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 ||
91149b5e25fSSatish Balay           p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 ||
91249b5e25fSSatish Balay           p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 ||
91349b5e25fSSatish Balay           p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) {
91449b5e25fSSatish Balay         pv = ba + 36*diag_offset[row];
91549b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
91649b5e25fSSatish Balay 	x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
91749b5e25fSSatish Balay 	x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
91849b5e25fSSatish Balay 	x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
91949b5e25fSSatish Balay 	x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
92049b5e25fSSatish Balay 	x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
92149b5e25fSSatish Balay 	x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
92249b5e25fSSatish Balay 	x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
92349b5e25fSSatish Balay 	x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
92449b5e25fSSatish Balay 	x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
92549b5e25fSSatish Balay         pc[0]  = m1  = p1*x1  + p7*x2   + p13*x3  + p19*x4  + p25*x5  + p31*x6;
92649b5e25fSSatish Balay         pc[1]  = m2  = p2*x1  + p8*x2   + p14*x3  + p20*x4  + p26*x5  + p32*x6;
92749b5e25fSSatish Balay         pc[2]  = m3  = p3*x1  + p9*x2   + p15*x3  + p21*x4  + p27*x5  + p33*x6;
92849b5e25fSSatish Balay         pc[3]  = m4  = p4*x1  + p10*x2  + p16*x3  + p22*x4  + p28*x5  + p34*x6;
92949b5e25fSSatish Balay         pc[4]  = m5  = p5*x1  + p11*x2  + p17*x3  + p23*x4  + p29*x5  + p35*x6;
93049b5e25fSSatish Balay         pc[5]  = m6  = p6*x1  + p12*x2  + p18*x3  + p24*x4  + p30*x5  + p36*x6;
93149b5e25fSSatish Balay 
93249b5e25fSSatish Balay         pc[6]  = m7  = p1*x7  + p7*x8   + p13*x9  + p19*x10 + p25*x11 + p31*x12;
93349b5e25fSSatish Balay         pc[7]  = m8  = p2*x7  + p8*x8   + p14*x9  + p20*x10 + p26*x11 + p32*x12;
93449b5e25fSSatish Balay         pc[8]  = m9  = p3*x7  + p9*x8   + p15*x9  + p21*x10 + p27*x11 + p33*x12;
93549b5e25fSSatish Balay         pc[9]  = m10 = p4*x7  + p10*x8  + p16*x9  + p22*x10 + p28*x11 + p34*x12;
93649b5e25fSSatish Balay         pc[10] = m11 = p5*x7  + p11*x8  + p17*x9  + p23*x10 + p29*x11 + p35*x12;
93749b5e25fSSatish Balay         pc[11] = m12 = p6*x7  + p12*x8  + p18*x9  + p24*x10 + p30*x11 + p36*x12;
93849b5e25fSSatish Balay 
93949b5e25fSSatish Balay         pc[12] = m13 = p1*x13 + p7*x14  + p13*x15 + p19*x16 + p25*x17 + p31*x18;
94049b5e25fSSatish Balay         pc[13] = m14 = p2*x13 + p8*x14  + p14*x15 + p20*x16 + p26*x17 + p32*x18;
94149b5e25fSSatish Balay         pc[14] = m15 = p3*x13 + p9*x14  + p15*x15 + p21*x16 + p27*x17 + p33*x18;
94249b5e25fSSatish Balay         pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18;
94349b5e25fSSatish Balay         pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18;
94449b5e25fSSatish Balay         pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18;
94549b5e25fSSatish Balay 
94649b5e25fSSatish Balay         pc[18] = m19 = p1*x19 + p7*x20  + p13*x21 + p19*x22 + p25*x23 + p31*x24;
94749b5e25fSSatish Balay         pc[19] = m20 = p2*x19 + p8*x20  + p14*x21 + p20*x22 + p26*x23 + p32*x24;
94849b5e25fSSatish Balay         pc[20] = m21 = p3*x19 + p9*x20  + p15*x21 + p21*x22 + p27*x23 + p33*x24;
94949b5e25fSSatish Balay         pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24;
95049b5e25fSSatish Balay         pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24;
95149b5e25fSSatish Balay         pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24;
95249b5e25fSSatish Balay 
95349b5e25fSSatish Balay         pc[24] = m25 = p1*x25 + p7*x26  + p13*x27 + p19*x28 + p25*x29 + p31*x30;
95449b5e25fSSatish Balay         pc[25] = m26 = p2*x25 + p8*x26  + p14*x27 + p20*x28 + p26*x29 + p32*x30;
95549b5e25fSSatish Balay         pc[26] = m27 = p3*x25 + p9*x26  + p15*x27 + p21*x28 + p27*x29 + p33*x30;
95649b5e25fSSatish Balay         pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30;
95749b5e25fSSatish Balay         pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30;
95849b5e25fSSatish Balay         pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30;
95949b5e25fSSatish Balay 
96049b5e25fSSatish Balay         pc[30] = m31 = p1*x31 + p7*x32  + p13*x33 + p19*x34 + p25*x35 + p31*x36;
96149b5e25fSSatish Balay         pc[31] = m32 = p2*x31 + p8*x32  + p14*x33 + p20*x34 + p26*x35 + p32*x36;
96249b5e25fSSatish Balay         pc[32] = m33 = p3*x31 + p9*x32  + p15*x33 + p21*x34 + p27*x35 + p33*x36;
96349b5e25fSSatish Balay         pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36;
96449b5e25fSSatish Balay         pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36;
96549b5e25fSSatish Balay         pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36;
96649b5e25fSSatish Balay 
96749b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
96849b5e25fSSatish Balay         pv += 36;
96949b5e25fSSatish Balay         for (j=0; j<nz; j++) {
97049b5e25fSSatish Balay 	  x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
97149b5e25fSSatish Balay 	  x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
97249b5e25fSSatish Balay 	  x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
97349b5e25fSSatish Balay 	  x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
97449b5e25fSSatish Balay 	  x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
97549b5e25fSSatish Balay 	  x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
97649b5e25fSSatish Balay 	  x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
97749b5e25fSSatish Balay 	  x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
97849b5e25fSSatish Balay 	  x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
97949b5e25fSSatish Balay 	  x    = rtmp + 36*pj[j];
98049b5e25fSSatish Balay           x[0]  -= m1*x1  + m7*x2   + m13*x3  + m19*x4  + m25*x5  + m31*x6;
98149b5e25fSSatish Balay           x[1]  -= m2*x1  + m8*x2   + m14*x3  + m20*x4  + m26*x5  + m32*x6;
98249b5e25fSSatish Balay           x[2]  -= m3*x1  + m9*x2   + m15*x3  + m21*x4  + m27*x5  + m33*x6;
98349b5e25fSSatish Balay           x[3]  -= m4*x1  + m10*x2  + m16*x3  + m22*x4  + m28*x5  + m34*x6;
98449b5e25fSSatish Balay           x[4]  -= m5*x1  + m11*x2  + m17*x3  + m23*x4  + m29*x5  + m35*x6;
98549b5e25fSSatish Balay           x[5]  -= m6*x1  + m12*x2  + m18*x3  + m24*x4  + m30*x5  + m36*x6;
98649b5e25fSSatish Balay 
98749b5e25fSSatish Balay 	  x[6]  -= m1*x7  + m7*x8   + m13*x9  + m19*x10 + m25*x11 + m31*x12;
98849b5e25fSSatish Balay 	  x[7]  -= m2*x7  + m8*x8   + m14*x9  + m20*x10 + m26*x11 + m32*x12;
98949b5e25fSSatish Balay 	  x[8]  -= m3*x7  + m9*x8   + m15*x9  + m21*x10 + m27*x11 + m33*x12;
99049b5e25fSSatish Balay 	  x[9]  -= m4*x7  + m10*x8  + m16*x9  + m22*x10 + m28*x11 + m34*x12;
99149b5e25fSSatish Balay 	  x[10] -= m5*x7  + m11*x8  + m17*x9  + m23*x10 + m29*x11 + m35*x12;
99249b5e25fSSatish Balay 	  x[11] -= m6*x7  + m12*x8  + m18*x9  + m24*x10 + m30*x11 + m36*x12;
99349b5e25fSSatish Balay 
99449b5e25fSSatish Balay 	  x[12] -= m1*x13 + m7*x14  + m13*x15 + m19*x16 + m25*x17 + m31*x18;
99549b5e25fSSatish Balay 	  x[13] -= m2*x13 + m8*x14  + m14*x15 + m20*x16 + m26*x17 + m32*x18;
99649b5e25fSSatish Balay 	  x[14] -= m3*x13 + m9*x14  + m15*x15 + m21*x16 + m27*x17 + m33*x18;
99749b5e25fSSatish Balay 	  x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18;
99849b5e25fSSatish Balay 	  x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18;
99949b5e25fSSatish Balay 	  x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18;
100049b5e25fSSatish Balay 
100149b5e25fSSatish Balay 	  x[18] -= m1*x19 + m7*x20  + m13*x21 + m19*x22 + m25*x23 + m31*x24;
100249b5e25fSSatish Balay 	  x[19] -= m2*x19 + m8*x20  + m14*x21 + m20*x22 + m26*x23 + m32*x24;
100349b5e25fSSatish Balay 	  x[20] -= m3*x19 + m9*x20  + m15*x21 + m21*x22 + m27*x23 + m33*x24;
100449b5e25fSSatish Balay 	  x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24;
100549b5e25fSSatish Balay 	  x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24;
100649b5e25fSSatish Balay 	  x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24;
100749b5e25fSSatish Balay 
100849b5e25fSSatish Balay 	  x[24] -= m1*x25 + m7*x26  + m13*x27 + m19*x28 + m25*x29 + m31*x30;
100949b5e25fSSatish Balay 	  x[25] -= m2*x25 + m8*x26  + m14*x27 + m20*x28 + m26*x29 + m32*x30;
101049b5e25fSSatish Balay 	  x[26] -= m3*x25 + m9*x26  + m15*x27 + m21*x28 + m27*x29 + m33*x30;
101149b5e25fSSatish Balay 	  x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30;
101249b5e25fSSatish Balay 	  x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30;
101349b5e25fSSatish Balay 	  x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30;
101449b5e25fSSatish Balay 
101549b5e25fSSatish Balay 	  x[30] -= m1*x31 + m7*x32  + m13*x33 + m19*x34 + m25*x35 + m31*x36;
101649b5e25fSSatish Balay 	  x[31] -= m2*x31 + m8*x32  + m14*x33 + m20*x34 + m26*x35 + m32*x36;
101749b5e25fSSatish Balay 	  x[32] -= m3*x31 + m9*x32  + m15*x33 + m21*x34 + m27*x35 + m33*x36;
101849b5e25fSSatish Balay 	  x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36;
101949b5e25fSSatish Balay 	  x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36;
102049b5e25fSSatish Balay 	  x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36;
102149b5e25fSSatish Balay 
102249b5e25fSSatish Balay           pv   += 36;
102349b5e25fSSatish Balay         }
102449b5e25fSSatish Balay         PLogFlops(432*nz+396);
102549b5e25fSSatish Balay       }
102649b5e25fSSatish Balay       row = *ajtmp++;
102749b5e25fSSatish Balay     }
102849b5e25fSSatish Balay     /* finished row so stick it into b->a */
102949b5e25fSSatish Balay     pv = ba + 36*bi[i];
103049b5e25fSSatish Balay     pj = bj + bi[i];
103149b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
103249b5e25fSSatish Balay     for (j=0; j<nz; j++) {
103349b5e25fSSatish Balay       x      = rtmp+36*pj[j];
103449b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
103549b5e25fSSatish Balay       pv[4]  = x[4];  pv[5]  = x[5];  pv[6]  = x[6];  pv[7]  = x[7];
103649b5e25fSSatish Balay       pv[8]  = x[8];  pv[9]  = x[9];  pv[10] = x[10]; pv[11] = x[11];
103749b5e25fSSatish Balay       pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15];
103849b5e25fSSatish Balay       pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19];
103949b5e25fSSatish Balay       pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23];
104049b5e25fSSatish Balay       pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27];
104149b5e25fSSatish Balay       pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31];
104249b5e25fSSatish Balay       pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35];
104349b5e25fSSatish Balay       pv   += 36;
104449b5e25fSSatish Balay     }
104549b5e25fSSatish Balay     /* invert diagonal block */
104649b5e25fSSatish Balay     w = ba + 36*diag_offset[i];
104749b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr);
104849b5e25fSSatish Balay   }
104949b5e25fSSatish Balay 
105049b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
105149b5e25fSSatish Balay   ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr);
105249b5e25fSSatish Balay   ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr);
105349b5e25fSSatish Balay   C->factor = FACTOR_LU;
105449b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
105549b5e25fSSatish Balay   PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */
105649b5e25fSSatish Balay   PetscFunctionReturn(0);
105749b5e25fSSatish Balay }
105849b5e25fSSatish Balay /*
105949b5e25fSSatish Balay       Version for when blocks are 6 by 6 Using natural ordering
106049b5e25fSSatish Balay */
106149b5e25fSSatish Balay #undef __FUNC__
10626f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering"
10636f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering(Mat A,Mat *B)
106449b5e25fSSatish Balay {
106549b5e25fSSatish Balay   Mat         C = *B;
106649b5e25fSSatish Balay   Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
106749b5e25fSSatish Balay   int         ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
106849b5e25fSSatish Balay   int         *ajtmpold,*ajtmp,nz,row;
106949b5e25fSSatish Balay   int         *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj;
107049b5e25fSSatish Balay   MatScalar   *pv,*v,*rtmp,*pc,*w,*x;
107149b5e25fSSatish Balay   MatScalar   x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15;
107249b5e25fSSatish Balay   MatScalar   x16,x17,x18,x19,x20,x21,x22,x23,x24,x25;
107349b5e25fSSatish Balay   MatScalar   p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15;
107449b5e25fSSatish Balay   MatScalar   p16,p17,p18,p19,p20,p21,p22,p23,p24,p25;
107549b5e25fSSatish Balay   MatScalar   m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15;
107649b5e25fSSatish Balay   MatScalar   m16,m17,m18,m19,m20,m21,m22,m23,m24,m25;
107749b5e25fSSatish Balay   MatScalar   p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36;
107849b5e25fSSatish Balay   MatScalar   x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36;
107949b5e25fSSatish Balay   MatScalar   m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36;
108049b5e25fSSatish Balay   MatScalar   *ba = b->a,*aa = a->a;
108149b5e25fSSatish Balay 
108249b5e25fSSatish Balay   PetscFunctionBegin;
108349b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
108449b5e25fSSatish Balay   for (i=0; i<n; i++) {
108549b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
108649b5e25fSSatish Balay     ajtmp = bj + bi[i];
108749b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
108849b5e25fSSatish Balay       x = rtmp+36*ajtmp[j];
108949b5e25fSSatish Balay       x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0;
109049b5e25fSSatish Balay       x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0;
109149b5e25fSSatish Balay       x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ;
109249b5e25fSSatish Balay       x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ;
109349b5e25fSSatish Balay       x[34] = x[35] = 0.0 ;
109449b5e25fSSatish Balay     }
109549b5e25fSSatish Balay     /* load in initial (unfactored row) */
109649b5e25fSSatish Balay     nz       = ai[i+1] - ai[i];
109749b5e25fSSatish Balay     ajtmpold = aj + ai[i];
109849b5e25fSSatish Balay     v        = aa + 36*ai[i];
109949b5e25fSSatish Balay     for (j=0; j<nz; j++) {
110049b5e25fSSatish Balay       x    = rtmp+36*ajtmpold[j];
110149b5e25fSSatish Balay       x[0] =  v[0];  x[1] =  v[1];  x[2] =  v[2];  x[3] =  v[3];
110249b5e25fSSatish Balay       x[4] =  v[4];  x[5] =  v[5];  x[6] =  v[6];  x[7] =  v[7];
110349b5e25fSSatish Balay       x[8] =  v[8];  x[9] =  v[9];  x[10] = v[10]; x[11] = v[11];
110449b5e25fSSatish Balay       x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15];
110549b5e25fSSatish Balay       x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19];
110649b5e25fSSatish Balay       x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23];
110749b5e25fSSatish Balay       x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27];
110849b5e25fSSatish Balay       x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31];
110949b5e25fSSatish Balay       x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35];
111049b5e25fSSatish Balay       v    += 36;
111149b5e25fSSatish Balay     }
111249b5e25fSSatish Balay     row = *ajtmp++;
111349b5e25fSSatish Balay     while (row < i) {
111449b5e25fSSatish Balay       pc  = rtmp + 36*row;
111549b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
111649b5e25fSSatish Balay       p5  = pc[4];  p6  = pc[5];  p7  = pc[6];  p8  = pc[7];
111749b5e25fSSatish Balay       p9  = pc[8];  p10 = pc[9];  p11 = pc[10]; p12 = pc[11];
111849b5e25fSSatish Balay       p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15];
111949b5e25fSSatish Balay       p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19];
112049b5e25fSSatish Balay       p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23];
112149b5e25fSSatish Balay       p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27];
112249b5e25fSSatish Balay       p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31];
112349b5e25fSSatish Balay       p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35];
112449b5e25fSSatish Balay       if (p1  != 0.0 || p2  != 0.0 || p3  != 0.0 || p4  != 0.0 ||
112549b5e25fSSatish Balay           p5  != 0.0 || p6  != 0.0 || p7  != 0.0 || p8  != 0.0 ||
112649b5e25fSSatish Balay           p9  != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 ||
112749b5e25fSSatish Balay           p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 ||
112849b5e25fSSatish Balay           p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 ||
112949b5e25fSSatish Balay           p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 ||
113049b5e25fSSatish Balay           p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 ||
113149b5e25fSSatish Balay           p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 ||
113249b5e25fSSatish Balay           p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) {
113349b5e25fSSatish Balay         pv = ba + 36*diag_offset[row];
113449b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
113549b5e25fSSatish Balay 	x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
113649b5e25fSSatish Balay 	x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
113749b5e25fSSatish Balay 	x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
113849b5e25fSSatish Balay 	x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
113949b5e25fSSatish Balay 	x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
114049b5e25fSSatish Balay 	x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
114149b5e25fSSatish Balay 	x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
114249b5e25fSSatish Balay 	x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
114349b5e25fSSatish Balay 	x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
114449b5e25fSSatish Balay         pc[0]  = m1  = p1*x1  + p7*x2   + p13*x3  + p19*x4  + p25*x5  + p31*x6;
114549b5e25fSSatish Balay         pc[1]  = m2  = p2*x1  + p8*x2   + p14*x3  + p20*x4  + p26*x5  + p32*x6;
114649b5e25fSSatish Balay         pc[2]  = m3  = p3*x1  + p9*x2   + p15*x3  + p21*x4  + p27*x5  + p33*x6;
114749b5e25fSSatish Balay         pc[3]  = m4  = p4*x1  + p10*x2  + p16*x3  + p22*x4  + p28*x5  + p34*x6;
114849b5e25fSSatish Balay         pc[4]  = m5  = p5*x1  + p11*x2  + p17*x3  + p23*x4  + p29*x5  + p35*x6;
114949b5e25fSSatish Balay         pc[5]  = m6  = p6*x1  + p12*x2  + p18*x3  + p24*x4  + p30*x5  + p36*x6;
115049b5e25fSSatish Balay 
115149b5e25fSSatish Balay         pc[6]  = m7  = p1*x7  + p7*x8   + p13*x9  + p19*x10 + p25*x11 + p31*x12;
115249b5e25fSSatish Balay         pc[7]  = m8  = p2*x7  + p8*x8   + p14*x9  + p20*x10 + p26*x11 + p32*x12;
115349b5e25fSSatish Balay         pc[8]  = m9  = p3*x7  + p9*x8   + p15*x9  + p21*x10 + p27*x11 + p33*x12;
115449b5e25fSSatish Balay         pc[9]  = m10 = p4*x7  + p10*x8  + p16*x9  + p22*x10 + p28*x11 + p34*x12;
115549b5e25fSSatish Balay         pc[10] = m11 = p5*x7  + p11*x8  + p17*x9  + p23*x10 + p29*x11 + p35*x12;
115649b5e25fSSatish Balay         pc[11] = m12 = p6*x7  + p12*x8  + p18*x9  + p24*x10 + p30*x11 + p36*x12;
115749b5e25fSSatish Balay 
115849b5e25fSSatish Balay         pc[12] = m13 = p1*x13 + p7*x14  + p13*x15 + p19*x16 + p25*x17 + p31*x18;
115949b5e25fSSatish Balay         pc[13] = m14 = p2*x13 + p8*x14  + p14*x15 + p20*x16 + p26*x17 + p32*x18;
116049b5e25fSSatish Balay         pc[14] = m15 = p3*x13 + p9*x14  + p15*x15 + p21*x16 + p27*x17 + p33*x18;
116149b5e25fSSatish Balay         pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18;
116249b5e25fSSatish Balay         pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18;
116349b5e25fSSatish Balay         pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18;
116449b5e25fSSatish Balay 
116549b5e25fSSatish Balay         pc[18] = m19 = p1*x19 + p7*x20  + p13*x21 + p19*x22 + p25*x23 + p31*x24;
116649b5e25fSSatish Balay         pc[19] = m20 = p2*x19 + p8*x20  + p14*x21 + p20*x22 + p26*x23 + p32*x24;
116749b5e25fSSatish Balay         pc[20] = m21 = p3*x19 + p9*x20  + p15*x21 + p21*x22 + p27*x23 + p33*x24;
116849b5e25fSSatish Balay         pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24;
116949b5e25fSSatish Balay         pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24;
117049b5e25fSSatish Balay         pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24;
117149b5e25fSSatish Balay 
117249b5e25fSSatish Balay         pc[24] = m25 = p1*x25 + p7*x26  + p13*x27 + p19*x28 + p25*x29 + p31*x30;
117349b5e25fSSatish Balay         pc[25] = m26 = p2*x25 + p8*x26  + p14*x27 + p20*x28 + p26*x29 + p32*x30;
117449b5e25fSSatish Balay         pc[26] = m27 = p3*x25 + p9*x26  + p15*x27 + p21*x28 + p27*x29 + p33*x30;
117549b5e25fSSatish Balay         pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30;
117649b5e25fSSatish Balay         pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30;
117749b5e25fSSatish Balay         pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30;
117849b5e25fSSatish Balay 
117949b5e25fSSatish Balay         pc[30] = m31 = p1*x31 + p7*x32  + p13*x33 + p19*x34 + p25*x35 + p31*x36;
118049b5e25fSSatish Balay         pc[31] = m32 = p2*x31 + p8*x32  + p14*x33 + p20*x34 + p26*x35 + p32*x36;
118149b5e25fSSatish Balay         pc[32] = m33 = p3*x31 + p9*x32  + p15*x33 + p21*x34 + p27*x35 + p33*x36;
118249b5e25fSSatish Balay         pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36;
118349b5e25fSSatish Balay         pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36;
118449b5e25fSSatish Balay         pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36;
118549b5e25fSSatish Balay 
118649b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
118749b5e25fSSatish Balay         pv += 36;
118849b5e25fSSatish Balay         for (j=0; j<nz; j++) {
118949b5e25fSSatish Balay 	  x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
119049b5e25fSSatish Balay 	  x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];
119149b5e25fSSatish Balay 	  x9  = pv[8];  x10 = pv[9];  x11 = pv[10]; x12 = pv[11];
119249b5e25fSSatish Balay 	  x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15];
119349b5e25fSSatish Balay 	  x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19];
119449b5e25fSSatish Balay 	  x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
119549b5e25fSSatish Balay 	  x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27];
119649b5e25fSSatish Balay 	  x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31];
119749b5e25fSSatish Balay 	  x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35];
119849b5e25fSSatish Balay 	  x    = rtmp + 36*pj[j];
119949b5e25fSSatish Balay           x[0]  -= m1*x1  + m7*x2   + m13*x3  + m19*x4  + m25*x5  + m31*x6;
120049b5e25fSSatish Balay           x[1]  -= m2*x1  + m8*x2   + m14*x3  + m20*x4  + m26*x5  + m32*x6;
120149b5e25fSSatish Balay           x[2]  -= m3*x1  + m9*x2   + m15*x3  + m21*x4  + m27*x5  + m33*x6;
120249b5e25fSSatish Balay           x[3]  -= m4*x1  + m10*x2  + m16*x3  + m22*x4  + m28*x5  + m34*x6;
120349b5e25fSSatish Balay           x[4]  -= m5*x1  + m11*x2  + m17*x3  + m23*x4  + m29*x5  + m35*x6;
120449b5e25fSSatish Balay           x[5]  -= m6*x1  + m12*x2  + m18*x3  + m24*x4  + m30*x5  + m36*x6;
120549b5e25fSSatish Balay 
120649b5e25fSSatish Balay 	  x[6]  -= m1*x7  + m7*x8   + m13*x9  + m19*x10 + m25*x11 + m31*x12;
120749b5e25fSSatish Balay 	  x[7]  -= m2*x7  + m8*x8   + m14*x9  + m20*x10 + m26*x11 + m32*x12;
120849b5e25fSSatish Balay 	  x[8]  -= m3*x7  + m9*x8   + m15*x9  + m21*x10 + m27*x11 + m33*x12;
120949b5e25fSSatish Balay 	  x[9]  -= m4*x7  + m10*x8  + m16*x9  + m22*x10 + m28*x11 + m34*x12;
121049b5e25fSSatish Balay 	  x[10] -= m5*x7  + m11*x8  + m17*x9  + m23*x10 + m29*x11 + m35*x12;
121149b5e25fSSatish Balay 	  x[11] -= m6*x7  + m12*x8  + m18*x9  + m24*x10 + m30*x11 + m36*x12;
121249b5e25fSSatish Balay 
121349b5e25fSSatish Balay 	  x[12] -= m1*x13 + m7*x14  + m13*x15 + m19*x16 + m25*x17 + m31*x18;
121449b5e25fSSatish Balay 	  x[13] -= m2*x13 + m8*x14  + m14*x15 + m20*x16 + m26*x17 + m32*x18;
121549b5e25fSSatish Balay 	  x[14] -= m3*x13 + m9*x14  + m15*x15 + m21*x16 + m27*x17 + m33*x18;
121649b5e25fSSatish Balay 	  x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18;
121749b5e25fSSatish Balay 	  x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18;
121849b5e25fSSatish Balay 	  x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18;
121949b5e25fSSatish Balay 
122049b5e25fSSatish Balay 	  x[18] -= m1*x19 + m7*x20  + m13*x21 + m19*x22 + m25*x23 + m31*x24;
122149b5e25fSSatish Balay 	  x[19] -= m2*x19 + m8*x20  + m14*x21 + m20*x22 + m26*x23 + m32*x24;
122249b5e25fSSatish Balay 	  x[20] -= m3*x19 + m9*x20  + m15*x21 + m21*x22 + m27*x23 + m33*x24;
122349b5e25fSSatish Balay 	  x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24;
122449b5e25fSSatish Balay 	  x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24;
122549b5e25fSSatish Balay 	  x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24;
122649b5e25fSSatish Balay 
122749b5e25fSSatish Balay 	  x[24] -= m1*x25 + m7*x26  + m13*x27 + m19*x28 + m25*x29 + m31*x30;
122849b5e25fSSatish Balay 	  x[25] -= m2*x25 + m8*x26  + m14*x27 + m20*x28 + m26*x29 + m32*x30;
122949b5e25fSSatish Balay 	  x[26] -= m3*x25 + m9*x26  + m15*x27 + m21*x28 + m27*x29 + m33*x30;
123049b5e25fSSatish Balay 	  x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30;
123149b5e25fSSatish Balay 	  x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30;
123249b5e25fSSatish Balay 	  x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30;
123349b5e25fSSatish Balay 
123449b5e25fSSatish Balay 	  x[30] -= m1*x31 + m7*x32  + m13*x33 + m19*x34 + m25*x35 + m31*x36;
123549b5e25fSSatish Balay 	  x[31] -= m2*x31 + m8*x32  + m14*x33 + m20*x34 + m26*x35 + m32*x36;
123649b5e25fSSatish Balay 	  x[32] -= m3*x31 + m9*x32  + m15*x33 + m21*x34 + m27*x35 + m33*x36;
123749b5e25fSSatish Balay 	  x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36;
123849b5e25fSSatish Balay 	  x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36;
123949b5e25fSSatish Balay 	  x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36;
124049b5e25fSSatish Balay 
124149b5e25fSSatish Balay           pv   += 36;
124249b5e25fSSatish Balay         }
124349b5e25fSSatish Balay         PLogFlops(432*nz+396);
124449b5e25fSSatish Balay       }
124549b5e25fSSatish Balay       row = *ajtmp++;
124649b5e25fSSatish Balay     }
124749b5e25fSSatish Balay     /* finished row so stick it into b->a */
124849b5e25fSSatish Balay     pv = ba + 36*bi[i];
124949b5e25fSSatish Balay     pj = bj + bi[i];
125049b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
125149b5e25fSSatish Balay     for (j=0; j<nz; j++) {
125249b5e25fSSatish Balay       x      = rtmp+36*pj[j];
125349b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
125449b5e25fSSatish Balay       pv[4]  = x[4];  pv[5]  = x[5];  pv[6]  = x[6];  pv[7]  = x[7];
125549b5e25fSSatish Balay       pv[8]  = x[8];  pv[9]  = x[9];  pv[10] = x[10]; pv[11] = x[11];
125649b5e25fSSatish Balay       pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15];
125749b5e25fSSatish Balay       pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19];
125849b5e25fSSatish Balay       pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23];
125949b5e25fSSatish Balay       pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27];
126049b5e25fSSatish Balay       pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31];
126149b5e25fSSatish Balay       pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35];
126249b5e25fSSatish Balay       pv   += 36;
126349b5e25fSSatish Balay     }
126449b5e25fSSatish Balay     /* invert diagonal block */
126549b5e25fSSatish Balay     w = ba + 36*diag_offset[i];
126649b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr);
126749b5e25fSSatish Balay   }
126849b5e25fSSatish Balay 
126949b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
127049b5e25fSSatish Balay   C->factor    = FACTOR_LU;
127149b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
127249b5e25fSSatish Balay   PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */
127349b5e25fSSatish Balay   PetscFunctionReturn(0);
127449b5e25fSSatish Balay }
127549b5e25fSSatish Balay 
1276*b59abe41SHong Zhang /* Version for when blocks are 5 by 5  */
1277*b59abe41SHong Zhang #undef __FUNC__
1278*b59abe41SHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5"
1279*b59abe41SHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat A,Mat *B)
1280*b59abe41SHong Zhang {
1281*b59abe41SHong Zhang   Mat                C = *B;
1282*b59abe41SHong Zhang   Mat_SeqSBAIJ       *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data;
1283*b59abe41SHong Zhang   IS                 perm = b->row;
1284*b59abe41SHong Zhang   int                *perm_ptr,ierr,i,j,mbs=a->mbs,*bi=b->i,*bj=b->j;
1285*b59abe41SHong Zhang   int                *ai,*aj,*a2anew,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili;
1286*b59abe41SHong Zhang   MatScalar          *ba = b->a,*aa,*ap,*dk,*uik;
1287*b59abe41SHong Zhang   MatScalar          *u,*d,*rtmp,*rtmp_ptr;
1288*b59abe41SHong Zhang 
1289*b59abe41SHong Zhang   PetscFunctionBegin;
1290*b59abe41SHong Zhang   /* initialization */
1291*b59abe41SHong Zhang   rtmp  = (MatScalar*)PetscMalloc(25*mbs*sizeof(MatScalar));CHKPTRQ(rtmp);
1292*b59abe41SHong Zhang   ierr = PetscMemzero(rtmp,25*mbs*sizeof(MatScalar));CHKERRQ(ierr);
1293*b59abe41SHong Zhang   il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il);
1294*b59abe41SHong Zhang   jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl);
1295*b59abe41SHong Zhang   for (i=0; i<mbs; i++) {
1296*b59abe41SHong Zhang     jl[i] = mbs; il[0] = 0;
1297*b59abe41SHong Zhang   }
1298*b59abe41SHong Zhang   dk    = (MatScalar*)PetscMalloc(25*sizeof(MatScalar));CHKPTRQ(dk);
1299*b59abe41SHong Zhang   uik   = (MatScalar*)PetscMalloc(25*sizeof(MatScalar));CHKPTRQ(uik);
1300*b59abe41SHong Zhang   ierr  = ISGetIndices(perm,&perm_ptr);CHKERRQ(ierr);
1301*b59abe41SHong Zhang 
1302*b59abe41SHong Zhang   /* check permutation */
1303*b59abe41SHong Zhang   if (!a->permute){
1304*b59abe41SHong Zhang     ai = a->i; aj = a->j; aa = a->a;
1305*b59abe41SHong Zhang   } else {
1306*b59abe41SHong Zhang     ai = a->inew; aj = a->jnew;
1307*b59abe41SHong Zhang     aa = (MatScalar*)PetscMalloc(25*ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa);
1308*b59abe41SHong Zhang     ierr = PetscMemcpy(aa,a->a,25*ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr);
1309*b59abe41SHong Zhang     a2anew  = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(a2anew);
1310*b59abe41SHong Zhang     ierr= PetscMemcpy(a2anew,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr);
1311*b59abe41SHong Zhang 
1312*b59abe41SHong Zhang     for (i=0; i<mbs; i++){
1313*b59abe41SHong Zhang       jmin = ai[i]; jmax = ai[i+1];
1314*b59abe41SHong Zhang       for (j=jmin; j<jmax; j++){
1315*b59abe41SHong Zhang         while (a2anew[j] != j){
1316*b59abe41SHong Zhang           k = a2anew[j]; a2anew[j] = a2anew[k]; a2anew[k] = k;
1317*b59abe41SHong Zhang           for (k1=0; k1<25; k1++){
1318*b59abe41SHong Zhang             dk[k1]       = aa[k*25+k1];
1319*b59abe41SHong Zhang             aa[k*25+k1] = aa[j*25+k1];
1320*b59abe41SHong Zhang             aa[j*25+k1] = dk[k1];
1321*b59abe41SHong Zhang           }
1322*b59abe41SHong Zhang         }
1323*b59abe41SHong Zhang         /* transform columnoriented blocks that lie in the lower triangle to roworiented blocks */
1324*b59abe41SHong Zhang         if (i > aj[j]){
1325*b59abe41SHong Zhang           /* printf("change orientation, row: %d, col: %d\n",i,aj[j]); */
1326*b59abe41SHong Zhang           ap = aa + j*25;                     /* ptr to the beginning of j-th block of aa */
1327*b59abe41SHong Zhang           for (k=0; k<25; k++) dk[k] = ap[k]; /* dk <- j-th block of aa */
1328*b59abe41SHong Zhang           for (k=0; k<5; k++){               /* j-th block of aa <- dk^T */
1329*b59abe41SHong Zhang             for (k1=0; k1<5; k1++) *ap++ = dk[k + 5*k1];
1330*b59abe41SHong Zhang           }
1331*b59abe41SHong Zhang         }
1332*b59abe41SHong Zhang       }
1333*b59abe41SHong Zhang     }
1334*b59abe41SHong Zhang     ierr = PetscFree(a2anew);CHKERRA(ierr);
1335*b59abe41SHong Zhang   }
1336*b59abe41SHong Zhang 
1337*b59abe41SHong Zhang   /* for each row k */
1338*b59abe41SHong Zhang   for (k = 0; k<mbs; k++){
1339*b59abe41SHong Zhang 
1340*b59abe41SHong Zhang     /*initialize k-th row with elements nonzero in row perm(k) of A */
1341*b59abe41SHong Zhang     jmin = ai[perm_ptr[k]]; jmax = ai[perm_ptr[k]+1];
1342*b59abe41SHong Zhang     if (jmin < jmax) {
1343*b59abe41SHong Zhang       ap = aa + jmin*25;
1344*b59abe41SHong Zhang       for (j = jmin; j < jmax; j++){
1345*b59abe41SHong Zhang         vj = perm_ptr[aj[j]];         /* block col. index */
1346*b59abe41SHong Zhang         rtmp_ptr = rtmp + vj*25;
1347*b59abe41SHong Zhang         for (i=0; i<25; i++) *rtmp_ptr++ = *ap++;
1348*b59abe41SHong Zhang       }
1349*b59abe41SHong Zhang     }
1350*b59abe41SHong Zhang 
1351*b59abe41SHong Zhang     /* modify k-th row by adding in those rows i with U(i,k) != 0 */
1352*b59abe41SHong Zhang     ierr = PetscMemcpy(dk,rtmp+k*25,25*sizeof(MatScalar));CHKERRQ(ierr);
1353*b59abe41SHong Zhang     i = jl[k]; /* first row to be added to k_th row  */
1354*b59abe41SHong Zhang 
1355*b59abe41SHong Zhang     while (i < mbs){
1356*b59abe41SHong Zhang       nexti = jl[i]; /* next row to be added to k_th row */
1357*b59abe41SHong Zhang 
1358*b59abe41SHong Zhang       /* compute multiplier */
1359*b59abe41SHong Zhang       ili = il[i];  /* index of first nonzero element in U(i,k:bms-1) */
1360*b59abe41SHong Zhang 
1361*b59abe41SHong Zhang       /* uik = -inv(Di)*U_bar(i,k) */
1362*b59abe41SHong Zhang       d = ba + i*25;
1363*b59abe41SHong Zhang       u    = ba + ili*25;
1364*b59abe41SHong Zhang 
1365*b59abe41SHong Zhang       uik[0] = -(d[0]*u[0] + d[5]*u[1] + d[10]*u[2] + d[15]*u[3] + d[20]*u[4]);
1366*b59abe41SHong Zhang       uik[1] = -(d[1]*u[0] + d[6]*u[1] + d[11]*u[2] + d[16]*u[3] + d[21]*u[4]);
1367*b59abe41SHong Zhang       uik[2] = -(d[2]*u[0] + d[7]*u[1] + d[12]*u[2] + d[17]*u[3] + d[22]*u[4]);
1368*b59abe41SHong Zhang       uik[3] = -(d[3]*u[0] + d[8]*u[1] + d[13]*u[2] + d[18]*u[3] + d[23]*u[4]);
1369*b59abe41SHong Zhang       uik[4] = -(d[4]*u[0] + d[9]*u[1] + d[14]*u[2] + d[19]*u[3] + d[24]*u[4]);
1370*b59abe41SHong Zhang 
1371*b59abe41SHong Zhang       uik[5] = -(d[0]*u[5] + d[5]*u[6] + d[10]*u[7] + d[15]*u[8] + d[20]*u[9]);
1372*b59abe41SHong Zhang       uik[6] = -(d[1]*u[5] + d[6]*u[6] + d[11]*u[7] + d[16]*u[8] + d[21]*u[9]);
1373*b59abe41SHong Zhang       uik[7] = -(d[2]*u[5] + d[7]*u[6] + d[12]*u[7] + d[17]*u[8] + d[22]*u[9]);
1374*b59abe41SHong Zhang       uik[8] = -(d[3]*u[5] + d[8]*u[6] + d[13]*u[7] + d[18]*u[8] + d[23]*u[9]);
1375*b59abe41SHong Zhang       uik[9] = -(d[4]*u[5] + d[9]*u[6] + d[14]*u[7] + d[19]*u[8] + d[24]*u[9]);
1376*b59abe41SHong Zhang 
1377*b59abe41SHong Zhang       uik[10]= -(d[0]*u[10] + d[5]*u[11] + d[10]*u[12] + d[15]*u[13] + d[20]*u[14]);
1378*b59abe41SHong Zhang       uik[11]= -(d[1]*u[10] + d[6]*u[11] + d[11]*u[12] + d[16]*u[13] + d[21]*u[14]);
1379*b59abe41SHong Zhang       uik[12]= -(d[2]*u[10] + d[7]*u[11] + d[12]*u[12] + d[17]*u[13] + d[22]*u[14]);
1380*b59abe41SHong Zhang       uik[13]= -(d[3]*u[10] + d[8]*u[11] + d[13]*u[12] + d[18]*u[13] + d[23]*u[14]);
1381*b59abe41SHong Zhang       uik[14]= -(d[4]*u[10] + d[9]*u[11] + d[14]*u[12] + d[19]*u[13] + d[24]*u[14]);
1382*b59abe41SHong Zhang 
1383*b59abe41SHong Zhang       uik[15]= -(d[0]*u[15] + d[5]*u[16] + d[10]*u[17] + d[15]*u[18] + d[20]*u[19]);
1384*b59abe41SHong Zhang       uik[16]= -(d[1]*u[15] + d[6]*u[16] + d[11]*u[17] + d[16]*u[18] + d[21]*u[19]);
1385*b59abe41SHong Zhang       uik[17]= -(d[2]*u[15] + d[7]*u[16] + d[12]*u[17] + d[17]*u[18] + d[22]*u[19]);
1386*b59abe41SHong Zhang       uik[18]= -(d[3]*u[15] + d[8]*u[16] + d[13]*u[17] + d[18]*u[18] + d[23]*u[19]);
1387*b59abe41SHong Zhang       uik[19]= -(d[4]*u[15] + d[9]*u[16] + d[14]*u[17] + d[19]*u[18] + d[24]*u[19]);
1388*b59abe41SHong Zhang 
1389*b59abe41SHong Zhang       uik[20]= -(d[0]*u[20] + d[5]*u[21] + d[10]*u[22] + d[15]*u[23] + d[20]*u[24]);
1390*b59abe41SHong Zhang       uik[21]= -(d[1]*u[20] + d[6]*u[21] + d[11]*u[22] + d[16]*u[23] + d[21]*u[24]);
1391*b59abe41SHong Zhang       uik[22]= -(d[2]*u[20] + d[7]*u[21] + d[12]*u[22] + d[17]*u[23] + d[22]*u[24]);
1392*b59abe41SHong Zhang       uik[23]= -(d[3]*u[20] + d[8]*u[21] + d[13]*u[22] + d[18]*u[23] + d[23]*u[24]);
1393*b59abe41SHong Zhang       uik[24]= -(d[4]*u[20] + d[9]*u[21] + d[14]*u[22] + d[19]*u[23] + d[24]*u[24]);
1394*b59abe41SHong Zhang 
1395*b59abe41SHong Zhang 
1396*b59abe41SHong Zhang       /* update D(k) += -U(i,k)^T * U_bar(i,k) */  /* undone yet! */
1397*b59abe41SHong Zhang       dk[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3];
1398*b59abe41SHong Zhang       dk[1] += uik[4]*u[0] + uik[5]*u[1] + uik[6]*u[2] + uik[7]*u[3];
1399*b59abe41SHong Zhang       dk[2] += uik[8]*u[0] + uik[9]*u[1] + uik[10]*u[2]+ uik[11]*u[3];
1400*b59abe41SHong Zhang       dk[3] += uik[12]*u[0]+ uik[13]*u[1]+ uik[14]*u[2]+ uik[15]*u[3];
1401*b59abe41SHong Zhang 
1402*b59abe41SHong Zhang       dk[4] += uik[0]*u[4] + uik[1]*u[5] + uik[2]*u[6] + uik[3]*u[7];
1403*b59abe41SHong Zhang       dk[5] += uik[4]*u[4] + uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7];
1404*b59abe41SHong Zhang       dk[6] += uik[8]*u[4] + uik[9]*u[5] + uik[10]*u[6]+ uik[11]*u[7];
1405*b59abe41SHong Zhang       dk[7] += uik[12]*u[4]+ uik[13]*u[5]+ uik[14]*u[6]+ uik[15]*u[7];
1406*b59abe41SHong Zhang 
1407*b59abe41SHong Zhang       dk[8] += uik[0]*u[8] + uik[1]*u[9] + uik[2]*u[10] + uik[3]*u[11];
1408*b59abe41SHong Zhang       dk[9] += uik[4]*u[8] + uik[5]*u[9] + uik[6]*u[10] + uik[7]*u[11];
1409*b59abe41SHong Zhang       dk[10]+= uik[8]*u[8] + uik[9]*u[9] + uik[10]*u[10]+ uik[11]*u[11];
1410*b59abe41SHong Zhang       dk[11]+= uik[12]*u[8]+ uik[13]*u[9]+ uik[14]*u[10]+ uik[15]*u[11];
1411*b59abe41SHong Zhang 
1412*b59abe41SHong Zhang       dk[12]+= uik[0]*u[12] + uik[1]*u[13] + uik[2]*u[14] + uik[3]*u[15];
1413*b59abe41SHong Zhang       dk[13]+= uik[4]*u[12] + uik[5]*u[13] + uik[6]*u[14] + uik[7]*u[15];
1414*b59abe41SHong Zhang       dk[14]+= uik[8]*u[12] + uik[9]*u[13] + uik[10]*u[14]+ uik[11]*u[15];
1415*b59abe41SHong Zhang       dk[15]+= uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]+ uik[15]*u[15];
1416*b59abe41SHong Zhang 
1417*b59abe41SHong Zhang       /* update -U(i,k) */
1418*b59abe41SHong Zhang       ierr = PetscMemcpy(ba+ili*25,uik,25*sizeof(MatScalar));CHKERRQ(ierr);
1419*b59abe41SHong Zhang 
1420*b59abe41SHong Zhang       /* add multiple of row i to k-th row ... */
1421*b59abe41SHong Zhang       jmin = ili + 1; jmax = bi[i+1];
1422*b59abe41SHong Zhang       if (jmin < jmax){
1423*b59abe41SHong Zhang         for (j=jmin; j<jmax; j++) {
1424*b59abe41SHong Zhang           /* rtmp += -U(i,k)^T * U_bar(i,j) */
1425*b59abe41SHong Zhang           rtmp_ptr = rtmp + bj[j]*25;
1426*b59abe41SHong Zhang           u = ba + j*25;
1427*b59abe41SHong Zhang           rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3];
1428*b59abe41SHong Zhang           rtmp_ptr[1] += uik[4]*u[0] + uik[5]*u[1] + uik[6]*u[2] + uik[7]*u[3];
1429*b59abe41SHong Zhang           rtmp_ptr[2] += uik[8]*u[0] + uik[9]*u[1] + uik[10]*u[2]+ uik[11]*u[3];
1430*b59abe41SHong Zhang           rtmp_ptr[3] += uik[12]*u[0]+ uik[13]*u[1]+ uik[14]*u[2]+ uik[15]*u[3];
1431*b59abe41SHong Zhang 
1432*b59abe41SHong Zhang           rtmp_ptr[4] += uik[0]*u[4] + uik[1]*u[5] + uik[2]*u[6] + uik[3]*u[7];
1433*b59abe41SHong Zhang           rtmp_ptr[5] += uik[4]*u[4] + uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7];
1434*b59abe41SHong Zhang           rtmp_ptr[6] += uik[8]*u[4] + uik[9]*u[5] + uik[10]*u[6]+ uik[11]*u[7];
1435*b59abe41SHong Zhang           rtmp_ptr[7] += uik[12]*u[4]+ uik[13]*u[5]+ uik[14]*u[6]+ uik[15]*u[7];
1436*b59abe41SHong Zhang 
1437*b59abe41SHong Zhang           rtmp_ptr[8] += uik[0]*u[8] + uik[1]*u[9] + uik[2]*u[10] + uik[3]*u[11];
1438*b59abe41SHong Zhang           rtmp_ptr[9] += uik[4]*u[8] + uik[5]*u[9] + uik[6]*u[10] + uik[7]*u[11];
1439*b59abe41SHong Zhang           rtmp_ptr[10]+= uik[8]*u[8] + uik[9]*u[9] + uik[10]*u[10]+ uik[11]*u[11];
1440*b59abe41SHong Zhang           rtmp_ptr[11]+= uik[12]*u[8]+ uik[13]*u[9]+ uik[14]*u[10]+ uik[15]*u[11];
1441*b59abe41SHong Zhang 
1442*b59abe41SHong Zhang           rtmp_ptr[12]+= uik[0]*u[12] + uik[1]*u[13] + uik[2]*u[14] + uik[3]*u[15];
1443*b59abe41SHong Zhang           rtmp_ptr[13]+= uik[4]*u[12] + uik[5]*u[13] + uik[6]*u[14] + uik[7]*u[15];
1444*b59abe41SHong Zhang           rtmp_ptr[14]+= uik[8]*u[12] + uik[9]*u[13] + uik[10]*u[14]+ uik[11]*u[15];
1445*b59abe41SHong Zhang           rtmp_ptr[15]+= uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]+ uik[15]*u[15];
1446*b59abe41SHong Zhang         }
1447*b59abe41SHong Zhang 
1448*b59abe41SHong Zhang         /* ... add i to row list for next nonzero entry */
1449*b59abe41SHong Zhang         il[i] = jmin;             /* update il(i) in column k+1, ... mbs-1 */
1450*b59abe41SHong Zhang         j     = bj[jmin];
1451*b59abe41SHong Zhang         jl[i] = jl[j]; jl[j] = i; /* update jl */
1452*b59abe41SHong Zhang       }
1453*b59abe41SHong Zhang       i = nexti;
1454*b59abe41SHong Zhang     }
1455*b59abe41SHong Zhang 
1456*b59abe41SHong Zhang     /* save nonzero entries in k-th row of U ... */
1457*b59abe41SHong Zhang 
1458*b59abe41SHong Zhang     /* invert diagonal block */
1459*b59abe41SHong Zhang     d = ba+k*25;
1460*b59abe41SHong Zhang     ierr = PetscMemcpy(d,dk,25*sizeof(MatScalar));CHKERRQ(ierr);
1461*b59abe41SHong Zhang     ierr = Kernel_A_gets_inverse_A_5(d);CHKERRQ(ierr);
1462*b59abe41SHong Zhang 
1463*b59abe41SHong Zhang     jmin = bi[k]; jmax = bi[k+1];
1464*b59abe41SHong Zhang     if (jmin < jmax) {
1465*b59abe41SHong Zhang       for (j=jmin; j<jmax; j++){
1466*b59abe41SHong Zhang          vj = bj[j];           /* block col. index of U */
1467*b59abe41SHong Zhang          u   = ba + j*25;
1468*b59abe41SHong Zhang          rtmp_ptr = rtmp + vj*25;
1469*b59abe41SHong Zhang          for (k1=0; k1<25; k1++){
1470*b59abe41SHong Zhang            *u++        = *rtmp_ptr;
1471*b59abe41SHong Zhang            *rtmp_ptr++ = 0.0;
1472*b59abe41SHong Zhang          }
1473*b59abe41SHong Zhang       }
1474*b59abe41SHong Zhang 
1475*b59abe41SHong Zhang       /* ... add k to row list for first nonzero entry in k-th row */
1476*b59abe41SHong Zhang       il[k] = jmin;
1477*b59abe41SHong Zhang       i     = bj[jmin];
1478*b59abe41SHong Zhang       jl[k] = jl[i]; jl[i] = k;
1479*b59abe41SHong Zhang     }
1480*b59abe41SHong Zhang   }
1481*b59abe41SHong Zhang 
1482*b59abe41SHong Zhang   ierr = PetscFree(rtmp);CHKERRQ(ierr);
1483*b59abe41SHong Zhang   ierr = PetscFree(il);CHKERRQ(ierr);
1484*b59abe41SHong Zhang   ierr = PetscFree(jl);CHKERRQ(ierr);
1485*b59abe41SHong Zhang   ierr = PetscFree(dk);CHKERRQ(ierr);
1486*b59abe41SHong Zhang   ierr = PetscFree(uik);CHKERRQ(ierr);
1487*b59abe41SHong Zhang   if (a->permute){
1488*b59abe41SHong Zhang     ierr = PetscFree(aa);CHKERRQ(ierr);
1489*b59abe41SHong Zhang   }
1490*b59abe41SHong Zhang 
1491*b59abe41SHong Zhang   ierr = ISRestoreIndices(perm,&perm_ptr);CHKERRQ(ierr);
1492*b59abe41SHong Zhang   C->factor    = FACTOR_CHOLESKY;
1493*b59abe41SHong Zhang   C->assembled = PETSC_TRUE;
1494*b59abe41SHong Zhang   C->preallocated = PETSC_TRUE;
1495*b59abe41SHong Zhang   PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */
1496*b59abe41SHong Zhang   PetscFunctionReturn(0);
1497*b59abe41SHong Zhang }
1498*b59abe41SHong Zhang #ifdef OLD
149949b5e25fSSatish Balay /*
150049b5e25fSSatish Balay       Version for when blocks are 5 by 5
150149b5e25fSSatish Balay */
150249b5e25fSSatish Balay #undef __FUNC__
15036f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5"
15046f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat A,Mat *B)
150549b5e25fSSatish Balay {
150649b5e25fSSatish Balay   Mat         C = *B;
150749b5e25fSSatish Balay   Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
150849b5e25fSSatish Balay   IS          isrow = b->row,isicol = b->icol;
150949b5e25fSSatish Balay   int         *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
151049b5e25fSSatish Balay   int         *ajtmpold,*ajtmp,nz,row;
151149b5e25fSSatish Balay   int         *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj;
151249b5e25fSSatish Balay   MatScalar   *pv,*v,*rtmp,*pc,*w,*x;
151349b5e25fSSatish Balay   MatScalar   p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4;
151449b5e25fSSatish Balay   MatScalar   p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16;
151549b5e25fSSatish Balay   MatScalar   x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14;
151649b5e25fSSatish Balay   MatScalar   p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12;
151749b5e25fSSatish Balay   MatScalar   m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25;
151849b5e25fSSatish Balay   MatScalar   *ba = b->a,*aa = a->a;
151949b5e25fSSatish Balay 
152049b5e25fSSatish Balay   PetscFunctionBegin;
152149b5e25fSSatish Balay   ierr  = ISGetIndices(isrow,&r);CHKERRQ(ierr);
152249b5e25fSSatish Balay   ierr  = ISGetIndices(isicol,&ic);CHKERRQ(ierr);
152349b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
152449b5e25fSSatish Balay 
152549b5e25fSSatish Balay   for (i=0; i<n; i++) {
152649b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
152749b5e25fSSatish Balay     ajtmp = bj + bi[i];
152849b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
152949b5e25fSSatish Balay       x = rtmp+25*ajtmp[j];
153049b5e25fSSatish Balay       x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0;
153149b5e25fSSatish Balay       x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0;
153249b5e25fSSatish Balay       x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0;
153349b5e25fSSatish Balay     }
153449b5e25fSSatish Balay     /* load in initial (unfactored row) */
153549b5e25fSSatish Balay     idx      = r[i];
153649b5e25fSSatish Balay     nz       = ai[idx+1] - ai[idx];
153749b5e25fSSatish Balay     ajtmpold = aj + ai[idx];
153849b5e25fSSatish Balay     v        = aa + 25*ai[idx];
153949b5e25fSSatish Balay     for (j=0; j<nz; j++) {
154049b5e25fSSatish Balay       x    = rtmp+25*ic[ajtmpold[j]];
154149b5e25fSSatish Balay       x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3];
154249b5e25fSSatish Balay       x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8];
154349b5e25fSSatish Balay       x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13];
154449b5e25fSSatish Balay       x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17];
154549b5e25fSSatish Balay       x[18] = v[18]; x[19] = v[19]; x[20] = v[20]; x[21] = v[21];
154649b5e25fSSatish Balay       x[22] = v[22]; x[23] = v[23]; x[24] = v[24];
154749b5e25fSSatish Balay       v    += 25;
154849b5e25fSSatish Balay     }
154949b5e25fSSatish Balay     row = *ajtmp++;
155049b5e25fSSatish Balay     while (row < i) {
155149b5e25fSSatish Balay       pc = rtmp + 25*row;
155249b5e25fSSatish Balay       p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3];
155349b5e25fSSatish Balay       p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8];
155449b5e25fSSatish Balay       p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13];
155549b5e25fSSatish Balay       p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17]; p19 = pc[18];
155649b5e25fSSatish Balay       p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23];
155749b5e25fSSatish Balay       p25 = pc[24];
155849b5e25fSSatish Balay       if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 ||
155949b5e25fSSatish Balay           p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 ||
156049b5e25fSSatish Balay           p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0
156149b5e25fSSatish Balay           || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 ||
156249b5e25fSSatish Balay           p20 != 0.0 || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 ||
156349b5e25fSSatish Balay           p24 != 0.0 || p25 != 0.0) {
156449b5e25fSSatish Balay         pv = ba + 25*diag_offset[row];
156549b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
156649b5e25fSSatish Balay         x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3];
156749b5e25fSSatish Balay         x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8];
156849b5e25fSSatish Balay         x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13];
156949b5e25fSSatish Balay         x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17];
157049b5e25fSSatish Balay         x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; x22 = pv[21];
157149b5e25fSSatish Balay         x23 = pv[22]; x24 = pv[23]; x25 = pv[24];
157249b5e25fSSatish Balay         pc[0] = m1 = p1*x1 + p6*x2  + p11*x3 + p16*x4 + p21*x5;
157349b5e25fSSatish Balay         pc[1] = m2 = p2*x1 + p7*x2  + p12*x3 + p17*x4 + p22*x5;
157449b5e25fSSatish Balay         pc[2] = m3 = p3*x1 + p8*x2  + p13*x3 + p18*x4 + p23*x5;
157549b5e25fSSatish Balay         pc[3] = m4 = p4*x1 + p9*x2  + p14*x3 + p19*x4 + p24*x5;
157649b5e25fSSatish Balay         pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5;
157749b5e25fSSatish Balay 
157849b5e25fSSatish Balay         pc[5] = m6 = p1*x6 + p6*x7  + p11*x8 + p16*x9 + p21*x10;
157949b5e25fSSatish Balay         pc[6] = m7 = p2*x6 + p7*x7  + p12*x8 + p17*x9 + p22*x10;
158049b5e25fSSatish Balay         pc[7] = m8 = p3*x6 + p8*x7  + p13*x8 + p18*x9 + p23*x10;
158149b5e25fSSatish Balay         pc[8] = m9 = p4*x6 + p9*x7  + p14*x8 + p19*x9 + p24*x10;
158249b5e25fSSatish Balay         pc[9] = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10;
158349b5e25fSSatish Balay 
158449b5e25fSSatish Balay         pc[10] = m11 = p1*x11 + p6*x12  + p11*x13 + p16*x14 + p21*x15;
158549b5e25fSSatish Balay         pc[11] = m12 = p2*x11 + p7*x12  + p12*x13 + p17*x14 + p22*x15;
158649b5e25fSSatish Balay         pc[12] = m13 = p3*x11 + p8*x12  + p13*x13 + p18*x14 + p23*x15;
158749b5e25fSSatish Balay         pc[13] = m14 = p4*x11 + p9*x12  + p14*x13 + p19*x14 + p24*x15;
158849b5e25fSSatish Balay         pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15;
158949b5e25fSSatish Balay 
159049b5e25fSSatish Balay         pc[15] = m16 = p1*x16 + p6*x17  + p11*x18 + p16*x19 + p21*x20;
159149b5e25fSSatish Balay         pc[16] = m17 = p2*x16 + p7*x17  + p12*x18 + p17*x19 + p22*x20;
159249b5e25fSSatish Balay         pc[17] = m18 = p3*x16 + p8*x17  + p13*x18 + p18*x19 + p23*x20;
159349b5e25fSSatish Balay         pc[18] = m19 = p4*x16 + p9*x17  + p14*x18 + p19*x19 + p24*x20;
159449b5e25fSSatish Balay         pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20;
159549b5e25fSSatish Balay 
159649b5e25fSSatish Balay         pc[20] = m21 = p1*x21 + p6*x22  + p11*x23 + p16*x24 + p21*x25;
159749b5e25fSSatish Balay         pc[21] = m22 = p2*x21 + p7*x22  + p12*x23 + p17*x24 + p22*x25;
159849b5e25fSSatish Balay         pc[22] = m23 = p3*x21 + p8*x22  + p13*x23 + p18*x24 + p23*x25;
159949b5e25fSSatish Balay         pc[23] = m24 = p4*x21 + p9*x22  + p14*x23 + p19*x24 + p24*x25;
160049b5e25fSSatish Balay         pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25;
160149b5e25fSSatish Balay 
160249b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
160349b5e25fSSatish Balay         pv += 25;
160449b5e25fSSatish Balay         for (j=0; j<nz; j++) {
160549b5e25fSSatish Balay           x1   = pv[0];  x2 = pv[1];   x3  = pv[2];  x4  = pv[3];
160649b5e25fSSatish Balay           x5   = pv[4];  x6 = pv[5];   x7  = pv[6];  x8  = pv[7]; x9 = pv[8];
160749b5e25fSSatish Balay           x10  = pv[9];  x11 = pv[10]; x12 = pv[11]; x13 = pv[12];
160849b5e25fSSatish Balay           x14  = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16];
160949b5e25fSSatish Balay           x18  = pv[17]; x19 = pv[18]; x20 = pv[19]; x21 = pv[20];
161049b5e25fSSatish Balay           x22  = pv[21]; x23 = pv[22]; x24 = pv[23]; x25 = pv[24];
161149b5e25fSSatish Balay           x    = rtmp + 25*pj[j];
161249b5e25fSSatish Balay           x[0] -= m1*x1 + m6*x2  + m11*x3 + m16*x4 + m21*x5;
161349b5e25fSSatish Balay           x[1] -= m2*x1 + m7*x2  + m12*x3 + m17*x4 + m22*x5;
161449b5e25fSSatish Balay           x[2] -= m3*x1 + m8*x2  + m13*x3 + m18*x4 + m23*x5;
161549b5e25fSSatish Balay           x[3] -= m4*x1 + m9*x2  + m14*x3 + m19*x4 + m24*x5;
161649b5e25fSSatish Balay           x[4] -= m5*x1 + m10*x2 + m15*x3 + m20*x4 + m25*x5;
161749b5e25fSSatish Balay 
161849b5e25fSSatish Balay           x[5] -= m1*x6 + m6*x7  + m11*x8 + m16*x9 + m21*x10;
161949b5e25fSSatish Balay           x[6] -= m2*x6 + m7*x7  + m12*x8 + m17*x9 + m22*x10;
162049b5e25fSSatish Balay           x[7] -= m3*x6 + m8*x7  + m13*x8 + m18*x9 + m23*x10;
162149b5e25fSSatish Balay           x[8] -= m4*x6 + m9*x7  + m14*x8 + m19*x9 + m24*x10;
162249b5e25fSSatish Balay           x[9] -= m5*x6 + m10*x7 + m15*x8 + m20*x9 + m25*x10;
162349b5e25fSSatish Balay 
162449b5e25fSSatish Balay           x[10] -= m1*x11 + m6*x12  + m11*x13 + m16*x14 + m21*x15;
162549b5e25fSSatish Balay           x[11] -= m2*x11 + m7*x12  + m12*x13 + m17*x14 + m22*x15;
162649b5e25fSSatish Balay           x[12] -= m3*x11 + m8*x12  + m13*x13 + m18*x14 + m23*x15;
162749b5e25fSSatish Balay           x[13] -= m4*x11 + m9*x12  + m14*x13 + m19*x14 + m24*x15;
162849b5e25fSSatish Balay           x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15;
162949b5e25fSSatish Balay 
163049b5e25fSSatish Balay           x[15] -= m1*x16 + m6*x17  + m11*x18 + m16*x19 + m21*x20;
163149b5e25fSSatish Balay           x[16] -= m2*x16 + m7*x17  + m12*x18 + m17*x19 + m22*x20;
163249b5e25fSSatish Balay           x[17] -= m3*x16 + m8*x17  + m13*x18 + m18*x19 + m23*x20;
163349b5e25fSSatish Balay           x[18] -= m4*x16 + m9*x17  + m14*x18 + m19*x19 + m24*x20;
163449b5e25fSSatish Balay           x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20;
163549b5e25fSSatish Balay 
163649b5e25fSSatish Balay           x[20] -= m1*x21 + m6*x22  + m11*x23 + m16*x24 + m21*x25;
163749b5e25fSSatish Balay           x[21] -= m2*x21 + m7*x22  + m12*x23 + m17*x24 + m22*x25;
163849b5e25fSSatish Balay           x[22] -= m3*x21 + m8*x22  + m13*x23 + m18*x24 + m23*x25;
163949b5e25fSSatish Balay           x[23] -= m4*x21 + m9*x22  + m14*x23 + m19*x24 + m24*x25;
164049b5e25fSSatish Balay           x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25;
164149b5e25fSSatish Balay 
164249b5e25fSSatish Balay           pv   += 25;
164349b5e25fSSatish Balay         }
164449b5e25fSSatish Balay         PLogFlops(250*nz+225);
164549b5e25fSSatish Balay       }
164649b5e25fSSatish Balay       row = *ajtmp++;
164749b5e25fSSatish Balay     }
164849b5e25fSSatish Balay     /* finished row so stick it into b->a */
164949b5e25fSSatish Balay     pv = ba + 25*bi[i];
165049b5e25fSSatish Balay     pj = bj + bi[i];
165149b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
165249b5e25fSSatish Balay     for (j=0; j<nz; j++) {
165349b5e25fSSatish Balay       x     = rtmp+25*pj[j];
165449b5e25fSSatish Balay       pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3];
165549b5e25fSSatish Balay       pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8];
165649b5e25fSSatish Balay       pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12];
165749b5e25fSSatish Balay       pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16];
165849b5e25fSSatish Balay       pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20];
165949b5e25fSSatish Balay       pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; pv[24] = x[24];
166049b5e25fSSatish Balay       pv   += 25;
166149b5e25fSSatish Balay     }
166249b5e25fSSatish Balay     /* invert diagonal block */
166349b5e25fSSatish Balay     w = ba + 25*diag_offset[i];
166449b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr);
166549b5e25fSSatish Balay   }
166649b5e25fSSatish Balay 
166749b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
166849b5e25fSSatish Balay   ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr);
166949b5e25fSSatish Balay   ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr);
167049b5e25fSSatish Balay   C->factor = FACTOR_LU;
167149b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
167249b5e25fSSatish Balay   PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */
167349b5e25fSSatish Balay   PetscFunctionReturn(0);
167449b5e25fSSatish Balay }
1675*b59abe41SHong Zhang #endif
167649b5e25fSSatish Balay /*
167749b5e25fSSatish Balay       Version for when blocks are 5 by 5 Using natural ordering
167849b5e25fSSatish Balay */
167949b5e25fSSatish Balay #undef __FUNC__
16806f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering"
16816f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat A,Mat *B)
168249b5e25fSSatish Balay {
168349b5e25fSSatish Balay   Mat         C = *B;
168449b5e25fSSatish Balay   Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
168549b5e25fSSatish Balay   int         ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
168649b5e25fSSatish Balay   int         *ajtmpold,*ajtmp,nz,row;
168749b5e25fSSatish Balay   int         *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj;
168849b5e25fSSatish Balay   MatScalar   *pv,*v,*rtmp,*pc,*w,*x;
168949b5e25fSSatish Balay   MatScalar   x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15;
169049b5e25fSSatish Balay   MatScalar   x16,x17,x18,x19,x20,x21,x22,x23,x24,x25;
169149b5e25fSSatish Balay   MatScalar   p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15;
169249b5e25fSSatish Balay   MatScalar   p16,p17,p18,p19,p20,p21,p22,p23,p24,p25;
169349b5e25fSSatish Balay   MatScalar   m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15;
169449b5e25fSSatish Balay   MatScalar   m16,m17,m18,m19,m20,m21,m22,m23,m24,m25;
169549b5e25fSSatish Balay   MatScalar   *ba = b->a,*aa = a->a;
169649b5e25fSSatish Balay 
169749b5e25fSSatish Balay   PetscFunctionBegin;
169849b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
169949b5e25fSSatish Balay   for (i=0; i<n; i++) {
170049b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
170149b5e25fSSatish Balay     ajtmp = bj + bi[i];
170249b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
170349b5e25fSSatish Balay       x = rtmp+25*ajtmp[j];
170449b5e25fSSatish Balay       x[0]  = x[1]  = x[2]  = x[3]  = x[4]  = x[5]  = x[6] = x[7] = x[8] = x[9] = 0.0;
170549b5e25fSSatish Balay       x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0;
170649b5e25fSSatish Balay       x[16] = x[17] = x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0;
170749b5e25fSSatish Balay     }
170849b5e25fSSatish Balay     /* load in initial (unfactored row) */
170949b5e25fSSatish Balay     nz       = ai[i+1] - ai[i];
171049b5e25fSSatish Balay     ajtmpold = aj + ai[i];
171149b5e25fSSatish Balay     v        = aa + 25*ai[i];
171249b5e25fSSatish Balay     for (j=0; j<nz; j++) {
171349b5e25fSSatish Balay       x    = rtmp+25*ajtmpold[j];
171449b5e25fSSatish Balay       x[0]  = v[0];  x[1]  = v[1];  x[2]  = v[2];  x[3]  = v[3];
171549b5e25fSSatish Balay       x[4]  = v[4];  x[5]  = v[5];  x[6]  = v[6];  x[7]  = v[7];  x[8]  = v[8];
171649b5e25fSSatish Balay       x[9]  = v[9];  x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13];
171749b5e25fSSatish Balay       x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17]; x[18] = v[18];
171849b5e25fSSatish Balay       x[19] = v[19]; x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23];
171949b5e25fSSatish Balay       x[24] = v[24];
172049b5e25fSSatish Balay       v    += 25;
172149b5e25fSSatish Balay     }
172249b5e25fSSatish Balay     row = *ajtmp++;
172349b5e25fSSatish Balay     while (row < i) {
172449b5e25fSSatish Balay       pc  = rtmp + 25*row;
172549b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
172649b5e25fSSatish Balay       p5  = pc[4];  p6  = pc[5];  p7  = pc[6];  p8  = pc[7];  p9  = pc[8];
172749b5e25fSSatish Balay       p10 = pc[9];  p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13];
172849b5e25fSSatish Balay       p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17];
172949b5e25fSSatish Balay       p19 = pc[18]; p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22];
173049b5e25fSSatish Balay       p24 = pc[23]; p25 = pc[24];
173149b5e25fSSatish Balay       if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 ||
173249b5e25fSSatish Balay           p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 ||
173349b5e25fSSatish Balay           p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0
173449b5e25fSSatish Balay           || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0
173549b5e25fSSatish Balay           || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || p25 != 0.0) {
173649b5e25fSSatish Balay         pv = ba + 25*diag_offset[row];
173749b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
173849b5e25fSSatish Balay         x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
173949b5e25fSSatish Balay         x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];  x9  = pv[8];
174049b5e25fSSatish Balay         x10 = pv[9];  x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13];
174149b5e25fSSatish Balay         x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; x19 = pv[18];
174249b5e25fSSatish Balay         x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23];
174349b5e25fSSatish Balay         x25 = pv[24];
174449b5e25fSSatish Balay         pc[0] = m1 = p1*x1 + p6*x2  + p11*x3 + p16*x4 + p21*x5;
174549b5e25fSSatish Balay         pc[1] = m2 = p2*x1 + p7*x2  + p12*x3 + p17*x4 + p22*x5;
174649b5e25fSSatish Balay         pc[2] = m3 = p3*x1 + p8*x2  + p13*x3 + p18*x4 + p23*x5;
174749b5e25fSSatish Balay         pc[3] = m4 = p4*x1 + p9*x2  + p14*x3 + p19*x4 + p24*x5;
174849b5e25fSSatish Balay         pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5;
174949b5e25fSSatish Balay 
175049b5e25fSSatish Balay         pc[5]  = m6  = p1*x6 + p6*x7  + p11*x8 + p16*x9 + p21*x10;
175149b5e25fSSatish Balay         pc[6]  = m7  = p2*x6 + p7*x7  + p12*x8 + p17*x9 + p22*x10;
175249b5e25fSSatish Balay         pc[7]  = m8  = p3*x6 + p8*x7  + p13*x8 + p18*x9 + p23*x10;
175349b5e25fSSatish Balay         pc[8]  = m9  = p4*x6 + p9*x7  + p14*x8 + p19*x9 + p24*x10;
175449b5e25fSSatish Balay         pc[9]  = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10;
175549b5e25fSSatish Balay 
175649b5e25fSSatish Balay         pc[10] = m11 = p1*x11 + p6*x12  + p11*x13 + p16*x14 + p21*x15;
175749b5e25fSSatish Balay         pc[11] = m12 = p2*x11 + p7*x12  + p12*x13 + p17*x14 + p22*x15;
175849b5e25fSSatish Balay         pc[12] = m13 = p3*x11 + p8*x12  + p13*x13 + p18*x14 + p23*x15;
175949b5e25fSSatish Balay         pc[13] = m14 = p4*x11 + p9*x12  + p14*x13 + p19*x14 + p24*x15;
176049b5e25fSSatish Balay         pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15;
176149b5e25fSSatish Balay 
176249b5e25fSSatish Balay         pc[15] = m16 = p1*x16 + p6*x17  + p11*x18 + p16*x19 + p21*x20;
176349b5e25fSSatish Balay         pc[16] = m17 = p2*x16 + p7*x17  + p12*x18 + p17*x19 + p22*x20;
176449b5e25fSSatish Balay         pc[17] = m18 = p3*x16 + p8*x17  + p13*x18 + p18*x19 + p23*x20;
176549b5e25fSSatish Balay         pc[18] = m19 = p4*x16 + p9*x17  + p14*x18 + p19*x19 + p24*x20;
176649b5e25fSSatish Balay         pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20;
176749b5e25fSSatish Balay 
176849b5e25fSSatish Balay         pc[20] = m21 = p1*x21 + p6*x22  + p11*x23 + p16*x24 + p21*x25;
176949b5e25fSSatish Balay         pc[21] = m22 = p2*x21 + p7*x22  + p12*x23 + p17*x24 + p22*x25;
177049b5e25fSSatish Balay         pc[22] = m23 = p3*x21 + p8*x22  + p13*x23 + p18*x24 + p23*x25;
177149b5e25fSSatish Balay         pc[23] = m24 = p4*x21 + p9*x22  + p14*x23 + p19*x24 + p24*x25;
177249b5e25fSSatish Balay         pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25;
177349b5e25fSSatish Balay 
177449b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
177549b5e25fSSatish Balay         pv += 25;
177649b5e25fSSatish Balay         for (j=0; j<nz; j++) {
177749b5e25fSSatish Balay           x1   = pv[0];  x2  = pv[1];   x3 = pv[2];  x4  = pv[3];
177849b5e25fSSatish Balay           x5   = pv[4];  x6  = pv[5];   x7 = pv[6];  x8  = pv[7]; x9 = pv[8];
177949b5e25fSSatish Balay           x10  = pv[9];  x11 = pv[10]; x12 = pv[11]; x13 = pv[12];
178049b5e25fSSatish Balay           x14  = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17];
178149b5e25fSSatish Balay           x19 = pv[18];  x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22];
178249b5e25fSSatish Balay           x24 = pv[23];  x25 = pv[24];
178349b5e25fSSatish Balay           x    = rtmp + 25*pj[j];
178449b5e25fSSatish Balay           x[0] -= m1*x1 + m6*x2   + m11*x3  + m16*x4 + m21*x5;
178549b5e25fSSatish Balay           x[1] -= m2*x1 + m7*x2   + m12*x3  + m17*x4 + m22*x5;
178649b5e25fSSatish Balay           x[2] -= m3*x1 + m8*x2   + m13*x3  + m18*x4 + m23*x5;
178749b5e25fSSatish Balay           x[3] -= m4*x1 + m9*x2   + m14*x3  + m19*x4 + m24*x5;
178849b5e25fSSatish Balay           x[4] -= m5*x1 + m10*x2  + m15*x3  + m20*x4 + m25*x5;
178949b5e25fSSatish Balay 
179049b5e25fSSatish Balay           x[5] -= m1*x6 + m6*x7   + m11*x8  + m16*x9 + m21*x10;
179149b5e25fSSatish Balay           x[6] -= m2*x6 + m7*x7   + m12*x8  + m17*x9 + m22*x10;
179249b5e25fSSatish Balay           x[7] -= m3*x6 + m8*x7   + m13*x8  + m18*x9 + m23*x10;
179349b5e25fSSatish Balay           x[8] -= m4*x6 + m9*x7   + m14*x8  + m19*x9 + m24*x10;
179449b5e25fSSatish Balay           x[9] -= m5*x6 + m10*x7  + m15*x8  + m20*x9 + m25*x10;
179549b5e25fSSatish Balay 
179649b5e25fSSatish Balay           x[10] -= m1*x11 + m6*x12  + m11*x13 + m16*x14 + m21*x15;
179749b5e25fSSatish Balay           x[11] -= m2*x11 + m7*x12  + m12*x13 + m17*x14 + m22*x15;
179849b5e25fSSatish Balay           x[12] -= m3*x11 + m8*x12  + m13*x13 + m18*x14 + m23*x15;
179949b5e25fSSatish Balay           x[13] -= m4*x11 + m9*x12  + m14*x13 + m19*x14 + m24*x15;
180049b5e25fSSatish Balay           x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15;
180149b5e25fSSatish Balay 
180249b5e25fSSatish Balay           x[15] -= m1*x16 + m6*x17  + m11*x18 + m16*x19 + m21*x20;
180349b5e25fSSatish Balay           x[16] -= m2*x16 + m7*x17  + m12*x18 + m17*x19 + m22*x20;
180449b5e25fSSatish Balay           x[17] -= m3*x16 + m8*x17  + m13*x18 + m18*x19 + m23*x20;
180549b5e25fSSatish Balay           x[18] -= m4*x16 + m9*x17  + m14*x18 + m19*x19 + m24*x20;
180649b5e25fSSatish Balay           x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20;
180749b5e25fSSatish Balay 
180849b5e25fSSatish Balay           x[20] -= m1*x21 + m6*x22  + m11*x23 + m16*x24 + m21*x25;
180949b5e25fSSatish Balay           x[21] -= m2*x21 + m7*x22  + m12*x23 + m17*x24 + m22*x25;
181049b5e25fSSatish Balay           x[22] -= m3*x21 + m8*x22  + m13*x23 + m18*x24 + m23*x25;
181149b5e25fSSatish Balay           x[23] -= m4*x21 + m9*x22  + m14*x23 + m19*x24 + m24*x25;
181249b5e25fSSatish Balay           x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25;
181349b5e25fSSatish Balay           pv   += 25;
181449b5e25fSSatish Balay         }
181549b5e25fSSatish Balay         PLogFlops(250*nz+225);
181649b5e25fSSatish Balay       }
181749b5e25fSSatish Balay       row = *ajtmp++;
181849b5e25fSSatish Balay     }
181949b5e25fSSatish Balay     /* finished row so stick it into b->a */
182049b5e25fSSatish Balay     pv = ba + 25*bi[i];
182149b5e25fSSatish Balay     pj = bj + bi[i];
182249b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
182349b5e25fSSatish Balay     for (j=0; j<nz; j++) {
182449b5e25fSSatish Balay       x      = rtmp+25*pj[j];
182549b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
182649b5e25fSSatish Balay       pv[4]  = x[4];  pv[5]  = x[5];  pv[6]  = x[6];  pv[7]  = x[7]; pv[8] = x[8];
182749b5e25fSSatish Balay       pv[9]  = x[9];  pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12];
182849b5e25fSSatish Balay       pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16]; pv[17] = x[17];
182949b5e25fSSatish Balay       pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22];
183049b5e25fSSatish Balay       pv[23] = x[23]; pv[24] = x[24];
183149b5e25fSSatish Balay       pv   += 25;
183249b5e25fSSatish Balay     }
183349b5e25fSSatish Balay     /* invert diagonal block */
183449b5e25fSSatish Balay     w = ba + 25*diag_offset[i];
183549b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr);
183649b5e25fSSatish Balay   }
183749b5e25fSSatish Balay 
183849b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
183949b5e25fSSatish Balay   C->factor    = FACTOR_LU;
184049b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
184149b5e25fSSatish Balay   PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */
184249b5e25fSSatish Balay   PetscFunctionReturn(0);
184349b5e25fSSatish Balay }
184449b5e25fSSatish Balay 
184549b5e25fSSatish Balay /*
184649b5e25fSSatish Balay       Version for when blocks are 4 by 4 Using natural ordering
184749b5e25fSSatish Balay */
184849b5e25fSSatish Balay #undef __FUNC__
18496f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering"
18506f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering(Mat A,Mat *B)
185149b5e25fSSatish Balay {
185249b5e25fSSatish Balay   Mat         C = *B;
185349b5e25fSSatish Balay   Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
185449b5e25fSSatish Balay   int         ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
185549b5e25fSSatish Balay   int         *ajtmpold,*ajtmp,nz,row;
185649b5e25fSSatish Balay   int         *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj;
185749b5e25fSSatish Balay   MatScalar   *pv,*v,*rtmp,*pc,*w,*x;
185849b5e25fSSatish Balay   MatScalar   p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4;
185949b5e25fSSatish Balay   MatScalar   p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16;
186049b5e25fSSatish Balay   MatScalar   p10,p11,p12,p13,p14,p15,p16,m10,m11,m12;
186149b5e25fSSatish Balay   MatScalar   m13,m14,m15,m16;
186249b5e25fSSatish Balay   MatScalar   *ba = b->a,*aa = a->a;
186349b5e25fSSatish Balay 
186449b5e25fSSatish Balay   PetscFunctionBegin;
186549b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(16*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
186649b5e25fSSatish Balay 
186749b5e25fSSatish Balay   for (i=0; i<n; i++) {
186849b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
186949b5e25fSSatish Balay     ajtmp = bj + bi[i];
187049b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
187149b5e25fSSatish Balay       x = rtmp+16*ajtmp[j];
187249b5e25fSSatish Balay       x[0]  = x[1]  = x[2]  = x[3]  = x[4]  = x[5]  = x[6] = x[7] = x[8] = x[9] = 0.0;
187349b5e25fSSatish Balay       x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0;
187449b5e25fSSatish Balay     }
187549b5e25fSSatish Balay     /* load in initial (unfactored row) */
187649b5e25fSSatish Balay     nz       = ai[i+1] - ai[i];
187749b5e25fSSatish Balay     ajtmpold = aj + ai[i];
187849b5e25fSSatish Balay     v        = aa + 16*ai[i];
187949b5e25fSSatish Balay     for (j=0; j<nz; j++) {
188049b5e25fSSatish Balay       x    = rtmp+16*ajtmpold[j];
188149b5e25fSSatish Balay       x[0]  = v[0];  x[1]  = v[1];  x[2]  = v[2];  x[3]  = v[3];
188249b5e25fSSatish Balay       x[4]  = v[4];  x[5]  = v[5];  x[6]  = v[6];  x[7]  = v[7];  x[8]  = v[8];
188349b5e25fSSatish Balay       x[9]  = v[9];  x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13];
188449b5e25fSSatish Balay       x[14] = v[14]; x[15] = v[15];
188549b5e25fSSatish Balay       v    += 16;
188649b5e25fSSatish Balay     }
188749b5e25fSSatish Balay     row = *ajtmp++;
188849b5e25fSSatish Balay     while (row < i) {
188949b5e25fSSatish Balay       pc  = rtmp + 16*row;
189049b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
189149b5e25fSSatish Balay       p5  = pc[4];  p6  = pc[5];  p7  = pc[6];  p8  = pc[7];  p9  = pc[8];
189249b5e25fSSatish Balay       p10 = pc[9];  p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13];
189349b5e25fSSatish Balay       p15 = pc[14]; p16 = pc[15];
189449b5e25fSSatish Balay       if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 ||
189549b5e25fSSatish Balay           p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 ||
189649b5e25fSSatish Balay           p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0
189749b5e25fSSatish Balay           || p16 != 0.0) {
189849b5e25fSSatish Balay         pv = ba + 16*diag_offset[row];
189949b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
190049b5e25fSSatish Balay         x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
190149b5e25fSSatish Balay         x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];  x9  = pv[8];
190249b5e25fSSatish Balay         x10 = pv[9];  x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13];
190349b5e25fSSatish Balay         x15 = pv[14]; x16 = pv[15];
190449b5e25fSSatish Balay         pc[0] = m1 = p1*x1 + p5*x2  + p9*x3  + p13*x4;
190549b5e25fSSatish Balay         pc[1] = m2 = p2*x1 + p6*x2  + p10*x3 + p14*x4;
190649b5e25fSSatish Balay         pc[2] = m3 = p3*x1 + p7*x2  + p11*x3 + p15*x4;
190749b5e25fSSatish Balay         pc[3] = m4 = p4*x1 + p8*x2  + p12*x3 + p16*x4;
190849b5e25fSSatish Balay 
190949b5e25fSSatish Balay         pc[4] = m5 = p1*x5 + p5*x6  + p9*x7  + p13*x8;
191049b5e25fSSatish Balay         pc[5] = m6 = p2*x5 + p6*x6  + p10*x7 + p14*x8;
191149b5e25fSSatish Balay         pc[6] = m7 = p3*x5 + p7*x6  + p11*x7 + p15*x8;
191249b5e25fSSatish Balay         pc[7] = m8 = p4*x5 + p8*x6  + p12*x7 + p16*x8;
191349b5e25fSSatish Balay 
191449b5e25fSSatish Balay         pc[8]  = m9  = p1*x9 + p5*x10  + p9*x11  + p13*x12;
191549b5e25fSSatish Balay         pc[9]  = m10 = p2*x9 + p6*x10  + p10*x11 + p14*x12;
191649b5e25fSSatish Balay         pc[10] = m11 = p3*x9 + p7*x10  + p11*x11 + p15*x12;
191749b5e25fSSatish Balay         pc[11] = m12 = p4*x9 + p8*x10  + p12*x11 + p16*x12;
191849b5e25fSSatish Balay 
191949b5e25fSSatish Balay         pc[12] = m13 = p1*x13 + p5*x14  + p9*x15  + p13*x16;
192049b5e25fSSatish Balay         pc[13] = m14 = p2*x13 + p6*x14  + p10*x15 + p14*x16;
192149b5e25fSSatish Balay         pc[14] = m15 = p3*x13 + p7*x14  + p11*x15 + p15*x16;
192249b5e25fSSatish Balay         pc[15] = m16 = p4*x13 + p8*x14  + p12*x15 + p16*x16;
192349b5e25fSSatish Balay 
192449b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
192549b5e25fSSatish Balay         pv += 16;
192649b5e25fSSatish Balay         for (j=0; j<nz; j++) {
192749b5e25fSSatish Balay           x1   = pv[0];  x2  = pv[1];   x3 = pv[2];  x4  = pv[3];
192849b5e25fSSatish Balay           x5   = pv[4];  x6  = pv[5];   x7 = pv[6];  x8  = pv[7]; x9 = pv[8];
192949b5e25fSSatish Balay           x10  = pv[9];  x11 = pv[10]; x12 = pv[11]; x13 = pv[12];
193049b5e25fSSatish Balay           x14  = pv[13]; x15 = pv[14]; x16 = pv[15];
193149b5e25fSSatish Balay           x    = rtmp + 16*pj[j];
193249b5e25fSSatish Balay           x[0] -= m1*x1 + m5*x2  + m9*x3  + m13*x4;
193349b5e25fSSatish Balay           x[1] -= m2*x1 + m6*x2  + m10*x3 + m14*x4;
193449b5e25fSSatish Balay           x[2] -= m3*x1 + m7*x2  + m11*x3 + m15*x4;
193549b5e25fSSatish Balay           x[3] -= m4*x1 + m8*x2  + m12*x3 + m16*x4;
193649b5e25fSSatish Balay 
193749b5e25fSSatish Balay           x[4] -= m1*x5 + m5*x6  + m9*x7  + m13*x8;
193849b5e25fSSatish Balay           x[5] -= m2*x5 + m6*x6  + m10*x7 + m14*x8;
193949b5e25fSSatish Balay           x[6] -= m3*x5 + m7*x6  + m11*x7 + m15*x8;
194049b5e25fSSatish Balay           x[7] -= m4*x5 + m8*x6  + m12*x7 + m16*x8;
194149b5e25fSSatish Balay 
194249b5e25fSSatish Balay           x[8]  -= m1*x9 + m5*x10 + m9*x11  + m13*x12;
194349b5e25fSSatish Balay           x[9]  -= m2*x9 + m6*x10 + m10*x11 + m14*x12;
194449b5e25fSSatish Balay           x[10] -= m3*x9 + m7*x10 + m11*x11 + m15*x12;
194549b5e25fSSatish Balay           x[11] -= m4*x9 + m8*x10 + m12*x11 + m16*x12;
194649b5e25fSSatish Balay 
194749b5e25fSSatish Balay           x[12] -= m1*x13 + m5*x14  + m9*x15  + m13*x16;
194849b5e25fSSatish Balay           x[13] -= m2*x13 + m6*x14  + m10*x15 + m14*x16;
194949b5e25fSSatish Balay           x[14] -= m3*x13 + m7*x14  + m11*x15 + m15*x16;
195049b5e25fSSatish Balay           x[15] -= m4*x13 + m8*x14  + m12*x15 + m16*x16;
195149b5e25fSSatish Balay 
195249b5e25fSSatish Balay           pv   += 16;
195349b5e25fSSatish Balay         }
195449b5e25fSSatish Balay         PLogFlops(128*nz+112);
195549b5e25fSSatish Balay       }
195649b5e25fSSatish Balay       row = *ajtmp++;
195749b5e25fSSatish Balay     }
195849b5e25fSSatish Balay     /* finished row so stick it into b->a */
195949b5e25fSSatish Balay     pv = ba + 16*bi[i];
196049b5e25fSSatish Balay     pj = bj + bi[i];
196149b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
196249b5e25fSSatish Balay     for (j=0; j<nz; j++) {
196349b5e25fSSatish Balay       x      = rtmp+16*pj[j];
196449b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
196549b5e25fSSatish Balay       pv[4]  = x[4];  pv[5]  = x[5];  pv[6]  = x[6];  pv[7]  = x[7]; pv[8] = x[8];
196649b5e25fSSatish Balay       pv[9]  = x[9];  pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12];
196749b5e25fSSatish Balay       pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15];
196849b5e25fSSatish Balay       pv   += 16;
196949b5e25fSSatish Balay     }
197049b5e25fSSatish Balay     /* invert diagonal block */
197149b5e25fSSatish Balay     w = ba + 16*diag_offset[i];
197249b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_4(w);CHKERRQ(ierr);
197349b5e25fSSatish Balay   }
197449b5e25fSSatish Balay 
197549b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
197649b5e25fSSatish Balay   C->factor    = FACTOR_LU;
197749b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
19787a05c331SHong Zhang   C->preallocated = PETSC_TRUE;
197949b5e25fSSatish Balay   PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */
198049b5e25fSSatish Balay   PetscFunctionReturn(0);
198149b5e25fSSatish Balay }
198249b5e25fSSatish Balay 
1983effa298cSHong Zhang /* Version for when blocks are 4 by 4  */
1984effa298cSHong Zhang #undef __FUNC__
1985effa298cSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4"
1986effa298cSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat A,Mat *B)
1987effa298cSHong Zhang {
1988effa298cSHong Zhang   Mat                C = *B;
1989effa298cSHong Zhang   Mat_SeqSBAIJ       *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data;
1990effa298cSHong Zhang   IS                 perm = b->row;
1991effa298cSHong Zhang   int                *perm_ptr,ierr,i,j,mbs=a->mbs,*bi=b->i,*bj=b->j;
1992effa298cSHong Zhang   int                *ai,*aj,*a2anew,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili;
1993effa298cSHong Zhang   MatScalar          *ba = b->a,*aa,*ap,*dk,*uik;
1994effa298cSHong Zhang   MatScalar          *u,*diag,*rtmp,*rtmp_ptr;
1995effa298cSHong Zhang 
1996effa298cSHong Zhang   PetscFunctionBegin;
1997effa298cSHong Zhang   /* initialization */
1998effa298cSHong Zhang   rtmp  = (MatScalar*)PetscMalloc(16*mbs*sizeof(MatScalar));CHKPTRQ(rtmp);
1999effa298cSHong Zhang   ierr = PetscMemzero(rtmp,16*mbs*sizeof(MatScalar));CHKERRQ(ierr);
2000effa298cSHong Zhang   il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il);
2001effa298cSHong Zhang   jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl);
2002effa298cSHong Zhang   for (i=0; i<mbs; i++) {
2003effa298cSHong Zhang     jl[i] = mbs; il[0] = 0;
2004effa298cSHong Zhang   }
2005effa298cSHong Zhang   dk    = (MatScalar*)PetscMalloc(16*sizeof(MatScalar));CHKPTRQ(dk);
2006effa298cSHong Zhang   uik   = (MatScalar*)PetscMalloc(16*sizeof(MatScalar));CHKPTRQ(uik);
2007effa298cSHong Zhang   ierr  = ISGetIndices(perm,&perm_ptr);CHKERRQ(ierr);
2008effa298cSHong Zhang 
2009effa298cSHong Zhang   /* check permutation */
2010effa298cSHong Zhang   if (!a->permute){
2011effa298cSHong Zhang     ai = a->i; aj = a->j; aa = a->a;
2012effa298cSHong Zhang   } else {
2013effa298cSHong Zhang     ai = a->inew; aj = a->jnew;
2014effa298cSHong Zhang     aa = (MatScalar*)PetscMalloc(16*ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa);
2015effa298cSHong Zhang     ierr = PetscMemcpy(aa,a->a,16*ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr);
2016effa298cSHong Zhang     a2anew  = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(a2anew);
2017effa298cSHong Zhang     ierr= PetscMemcpy(a2anew,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr);
2018effa298cSHong Zhang 
2019effa298cSHong Zhang     for (i=0; i<mbs; i++){
2020effa298cSHong Zhang       jmin = ai[i]; jmax = ai[i+1];
2021effa298cSHong Zhang       for (j=jmin; j<jmax; j++){
2022effa298cSHong Zhang         while (a2anew[j] != j){
2023effa298cSHong Zhang           k = a2anew[j]; a2anew[j] = a2anew[k]; a2anew[k] = k;
2024effa298cSHong Zhang           for (k1=0; k1<16; k1++){
2025effa298cSHong Zhang             dk[k1]       = aa[k*16+k1];
2026effa298cSHong Zhang             aa[k*16+k1] = aa[j*16+k1];
2027effa298cSHong Zhang             aa[j*16+k1] = dk[k1];
2028effa298cSHong Zhang           }
2029effa298cSHong Zhang         }
2030effa298cSHong Zhang         /* transform columnoriented blocks that lie in the lower triangle to roworiented blocks */
2031effa298cSHong Zhang         if (i > aj[j]){
2032effa298cSHong Zhang           /* printf("change orientation, row: %d, col: %d\n",i,aj[j]); */
2033effa298cSHong Zhang           ap = aa + j*16;                     /* ptr to the beginning of j-th block of aa */
2034effa298cSHong Zhang           for (k=0; k<16; k++) dk[k] = ap[k]; /* dk <- j-th block of aa */
2035effa298cSHong Zhang           for (k=0; k<4; k++){               /* j-th block of aa <- dk^T */
2036effa298cSHong Zhang             for (k1=0; k1<4; k1++) *ap++ = dk[k + 4*k1];
2037effa298cSHong Zhang           }
2038effa298cSHong Zhang         }
2039effa298cSHong Zhang       }
2040effa298cSHong Zhang     }
2041effa298cSHong Zhang     ierr = PetscFree(a2anew);CHKERRA(ierr);
2042effa298cSHong Zhang   }
2043effa298cSHong Zhang 
2044effa298cSHong Zhang   /* for each row k */
2045effa298cSHong Zhang   for (k = 0; k<mbs; k++){
2046effa298cSHong Zhang 
2047effa298cSHong Zhang     /*initialize k-th row with elements nonzero in row perm(k) of A */
2048effa298cSHong Zhang     jmin = ai[perm_ptr[k]]; jmax = ai[perm_ptr[k]+1];
2049effa298cSHong Zhang     if (jmin < jmax) {
2050effa298cSHong Zhang       ap = aa + jmin*16;
2051effa298cSHong Zhang       for (j = jmin; j < jmax; j++){
2052effa298cSHong Zhang         vj = perm_ptr[aj[j]];         /* block col. index */
2053effa298cSHong Zhang         rtmp_ptr = rtmp + vj*16;
2054effa298cSHong Zhang         for (i=0; i<16; i++) *rtmp_ptr++ = *ap++;
2055effa298cSHong Zhang       }
2056effa298cSHong Zhang     }
2057effa298cSHong Zhang 
2058effa298cSHong Zhang     /* modify k-th row by adding in those rows i with U(i,k) != 0 */
2059effa298cSHong Zhang     ierr = PetscMemcpy(dk,rtmp+k*16,16*sizeof(MatScalar));CHKERRQ(ierr);
2060effa298cSHong Zhang     i = jl[k]; /* first row to be added to k_th row  */
2061effa298cSHong Zhang 
2062effa298cSHong Zhang     while (i < mbs){
2063effa298cSHong Zhang       nexti = jl[i]; /* next row to be added to k_th row */
2064effa298cSHong Zhang 
2065effa298cSHong Zhang       /* compute multiplier */
2066effa298cSHong Zhang       ili = il[i];  /* index of first nonzero element in U(i,k:bms-1) */
2067effa298cSHong Zhang 
2068effa298cSHong Zhang       /* uik = -inv(Di)*U_bar(i,k) */
2069effa298cSHong Zhang       diag = ba + i*16;
2070effa298cSHong Zhang       u    = ba + ili*16;
2071effa298cSHong Zhang 
2072effa298cSHong Zhang       uik[0] = -(diag[0]*u[0] + diag[4]*u[1] + diag[8]*u[2] + diag[12]*u[3]);
2073effa298cSHong Zhang       uik[1] = -(diag[1]*u[0] + diag[5]*u[1] + diag[9]*u[2] + diag[13]*u[3]);
2074effa298cSHong Zhang       uik[2] = -(diag[2]*u[0] + diag[6]*u[1] + diag[10]*u[2]+ diag[14]*u[3]);
2075effa298cSHong Zhang       uik[3] = -(diag[3]*u[0] + diag[7]*u[1] + diag[11]*u[2]+ diag[15]*u[3]);
2076effa298cSHong Zhang 
2077effa298cSHong Zhang       uik[4] = -(diag[0]*u[4] + diag[4]*u[5] + diag[8]*u[6] + diag[12]*u[7]);
2078effa298cSHong Zhang       uik[5] = -(diag[1]*u[4] + diag[5]*u[5] + diag[9]*u[6] + diag[13]*u[7]);
2079effa298cSHong Zhang       uik[6] = -(diag[2]*u[4] + diag[6]*u[5] + diag[10]*u[6]+ diag[14]*u[7]);
2080effa298cSHong Zhang       uik[7] = -(diag[3]*u[4] + diag[7]*u[5] + diag[11]*u[6]+ diag[15]*u[7]);
2081effa298cSHong Zhang 
2082effa298cSHong Zhang       uik[8] = -(diag[0]*u[8] + diag[4]*u[9] + diag[8]*u[10] + diag[12]*u[11]);
2083effa298cSHong Zhang       uik[9] = -(diag[1]*u[8] + diag[5]*u[9] + diag[9]*u[10] + diag[13]*u[11]);
2084effa298cSHong Zhang       uik[10]= -(diag[2]*u[8] + diag[6]*u[9] + diag[10]*u[10]+ diag[14]*u[11]);
2085effa298cSHong Zhang       uik[11]= -(diag[3]*u[8] + diag[7]*u[9] + diag[11]*u[10]+ diag[15]*u[11]);
2086effa298cSHong Zhang 
2087effa298cSHong Zhang       uik[12]= -(diag[0]*u[12] + diag[4]*u[13] + diag[8]*u[14] + diag[12]*u[15]);
2088effa298cSHong Zhang       uik[13]= -(diag[1]*u[12] + diag[5]*u[13] + diag[9]*u[14] + diag[13]*u[15]);
2089effa298cSHong Zhang       uik[14]= -(diag[2]*u[12] + diag[6]*u[13] + diag[10]*u[14]+ diag[14]*u[15]);
2090effa298cSHong Zhang       uik[15]= -(diag[3]*u[12] + diag[7]*u[13] + diag[11]*u[14]+ diag[15]*u[15]);
2091effa298cSHong Zhang 
2092effa298cSHong Zhang       /* update D(k) += -U(i,k)^T * U_bar(i,k) */
2093effa298cSHong Zhang       dk[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3];
2094effa298cSHong Zhang       dk[1] += uik[4]*u[0] + uik[5]*u[1] + uik[6]*u[2] + uik[7]*u[3];
2095effa298cSHong Zhang       dk[2] += uik[8]*u[0] + uik[9]*u[1] + uik[10]*u[2]+ uik[11]*u[3];
2096effa298cSHong Zhang       dk[3] += uik[12]*u[0]+ uik[13]*u[1]+ uik[14]*u[2]+ uik[15]*u[3];
2097effa298cSHong Zhang 
2098effa298cSHong Zhang       dk[4] += uik[0]*u[4] + uik[1]*u[5] + uik[2]*u[6] + uik[3]*u[7];
2099effa298cSHong Zhang       dk[5] += uik[4]*u[4] + uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7];
2100effa298cSHong Zhang       dk[6] += uik[8]*u[4] + uik[9]*u[5] + uik[10]*u[6]+ uik[11]*u[7];
2101effa298cSHong Zhang       dk[7] += uik[12]*u[4]+ uik[13]*u[5]+ uik[14]*u[6]+ uik[15]*u[7];
2102effa298cSHong Zhang 
2103effa298cSHong Zhang       dk[8] += uik[0]*u[8] + uik[1]*u[9] + uik[2]*u[10] + uik[3]*u[11];
2104effa298cSHong Zhang       dk[9] += uik[4]*u[8] + uik[5]*u[9] + uik[6]*u[10] + uik[7]*u[11];
2105effa298cSHong Zhang       dk[10]+= uik[8]*u[8] + uik[9]*u[9] + uik[10]*u[10]+ uik[11]*u[11];
2106effa298cSHong Zhang       dk[11]+= uik[12]*u[8]+ uik[13]*u[9]+ uik[14]*u[10]+ uik[15]*u[11];
2107effa298cSHong Zhang 
2108effa298cSHong Zhang       dk[12]+= uik[0]*u[12] + uik[1]*u[13] + uik[2]*u[14] + uik[3]*u[15];
2109effa298cSHong Zhang       dk[13]+= uik[4]*u[12] + uik[5]*u[13] + uik[6]*u[14] + uik[7]*u[15];
2110effa298cSHong Zhang       dk[14]+= uik[8]*u[12] + uik[9]*u[13] + uik[10]*u[14]+ uik[11]*u[15];
2111effa298cSHong Zhang       dk[15]+= uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]+ uik[15]*u[15];
2112effa298cSHong Zhang 
2113effa298cSHong Zhang       /* update -U(i,k) */
2114effa298cSHong Zhang       ierr = PetscMemcpy(ba+ili*16,uik,16*sizeof(MatScalar));CHKERRQ(ierr);
2115effa298cSHong Zhang 
2116effa298cSHong Zhang       /* add multiple of row i to k-th row ... */
2117effa298cSHong Zhang       jmin = ili + 1; jmax = bi[i+1];
2118effa298cSHong Zhang       if (jmin < jmax){
2119effa298cSHong Zhang         for (j=jmin; j<jmax; j++) {
2120effa298cSHong Zhang           /* rtmp += -U(i,k)^T * U_bar(i,j) */
2121effa298cSHong Zhang           rtmp_ptr = rtmp + bj[j]*16;
2122effa298cSHong Zhang           u = ba + j*16;
2123effa298cSHong Zhang           rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3];
2124effa298cSHong Zhang           rtmp_ptr[1] += uik[4]*u[0] + uik[5]*u[1] + uik[6]*u[2] + uik[7]*u[3];
2125effa298cSHong Zhang           rtmp_ptr[2] += uik[8]*u[0] + uik[9]*u[1] + uik[10]*u[2]+ uik[11]*u[3];
2126effa298cSHong Zhang           rtmp_ptr[3] += uik[12]*u[0]+ uik[13]*u[1]+ uik[14]*u[2]+ uik[15]*u[3];
2127effa298cSHong Zhang 
2128effa298cSHong Zhang           rtmp_ptr[4] += uik[0]*u[4] + uik[1]*u[5] + uik[2]*u[6] + uik[3]*u[7];
2129effa298cSHong Zhang           rtmp_ptr[5] += uik[4]*u[4] + uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7];
2130effa298cSHong Zhang           rtmp_ptr[6] += uik[8]*u[4] + uik[9]*u[5] + uik[10]*u[6]+ uik[11]*u[7];
2131effa298cSHong Zhang           rtmp_ptr[7] += uik[12]*u[4]+ uik[13]*u[5]+ uik[14]*u[6]+ uik[15]*u[7];
2132effa298cSHong Zhang 
2133effa298cSHong Zhang           rtmp_ptr[8] += uik[0]*u[8] + uik[1]*u[9] + uik[2]*u[10] + uik[3]*u[11];
2134effa298cSHong Zhang           rtmp_ptr[9] += uik[4]*u[8] + uik[5]*u[9] + uik[6]*u[10] + uik[7]*u[11];
2135effa298cSHong Zhang           rtmp_ptr[10]+= uik[8]*u[8] + uik[9]*u[9] + uik[10]*u[10]+ uik[11]*u[11];
2136effa298cSHong Zhang           rtmp_ptr[11]+= uik[12]*u[8]+ uik[13]*u[9]+ uik[14]*u[10]+ uik[15]*u[11];
2137effa298cSHong Zhang 
2138effa298cSHong Zhang           rtmp_ptr[12]+= uik[0]*u[12] + uik[1]*u[13] + uik[2]*u[14] + uik[3]*u[15];
2139effa298cSHong Zhang           rtmp_ptr[13]+= uik[4]*u[12] + uik[5]*u[13] + uik[6]*u[14] + uik[7]*u[15];
2140effa298cSHong Zhang           rtmp_ptr[14]+= uik[8]*u[12] + uik[9]*u[13] + uik[10]*u[14]+ uik[11]*u[15];
2141effa298cSHong Zhang           rtmp_ptr[15]+= uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]+ uik[15]*u[15];
2142effa298cSHong Zhang         }
2143effa298cSHong Zhang 
2144effa298cSHong Zhang         /* ... add i to row list for next nonzero entry */
2145effa298cSHong Zhang         il[i] = jmin;             /* update il(i) in column k+1, ... mbs-1 */
2146effa298cSHong Zhang         j     = bj[jmin];
2147effa298cSHong Zhang         jl[i] = jl[j]; jl[j] = i; /* update jl */
2148effa298cSHong Zhang       }
2149effa298cSHong Zhang       i = nexti;
2150effa298cSHong Zhang     }
2151effa298cSHong Zhang 
2152effa298cSHong Zhang     /* save nonzero entries in k-th row of U ... */
2153effa298cSHong Zhang 
2154effa298cSHong Zhang     /* invert diagonal block */
2155effa298cSHong Zhang     diag = ba+k*16;
2156effa298cSHong Zhang     ierr = PetscMemcpy(diag,dk,16*sizeof(MatScalar));CHKERRQ(ierr);
2157effa298cSHong Zhang     ierr = Kernel_A_gets_inverse_A_4(diag);CHKERRQ(ierr);
2158effa298cSHong Zhang 
2159effa298cSHong Zhang     jmin = bi[k]; jmax = bi[k+1];
2160effa298cSHong Zhang     if (jmin < jmax) {
2161effa298cSHong Zhang       for (j=jmin; j<jmax; j++){
2162effa298cSHong Zhang          vj = bj[j];           /* block col. index of U */
2163effa298cSHong Zhang          u   = ba + j*16;
2164effa298cSHong Zhang          rtmp_ptr = rtmp + vj*16;
2165effa298cSHong Zhang          for (k1=0; k1<16; k1++){
2166effa298cSHong Zhang            *u++        = *rtmp_ptr;
2167effa298cSHong Zhang            *rtmp_ptr++ = 0.0;
2168effa298cSHong Zhang          }
2169effa298cSHong Zhang       }
2170effa298cSHong Zhang 
2171effa298cSHong Zhang       /* ... add k to row list for first nonzero entry in k-th row */
2172effa298cSHong Zhang       il[k] = jmin;
2173effa298cSHong Zhang       i     = bj[jmin];
2174effa298cSHong Zhang       jl[k] = jl[i]; jl[i] = k;
2175effa298cSHong Zhang     }
2176effa298cSHong Zhang   }
2177effa298cSHong Zhang 
2178effa298cSHong Zhang   ierr = PetscFree(rtmp);CHKERRQ(ierr);
2179effa298cSHong Zhang   ierr = PetscFree(il);CHKERRQ(ierr);
2180effa298cSHong Zhang   ierr = PetscFree(jl);CHKERRQ(ierr);
2181effa298cSHong Zhang   ierr = PetscFree(dk);CHKERRQ(ierr);
2182effa298cSHong Zhang   ierr = PetscFree(uik);CHKERRQ(ierr);
2183effa298cSHong Zhang   if (a->permute){
2184effa298cSHong Zhang     ierr = PetscFree(aa);CHKERRQ(ierr);
2185effa298cSHong Zhang   }
2186effa298cSHong Zhang 
2187effa298cSHong Zhang   ierr = ISRestoreIndices(perm,&perm_ptr);CHKERRQ(ierr);
2188effa298cSHong Zhang   C->factor    = FACTOR_CHOLESKY;
2189effa298cSHong Zhang   C->assembled = PETSC_TRUE;
2190effa298cSHong Zhang   C->preallocated = PETSC_TRUE;
2191effa298cSHong Zhang   PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */
2192effa298cSHong Zhang   PetscFunctionReturn(0);
2193effa298cSHong Zhang }
2194effa298cSHong Zhang 
2195a1723e09SHong Zhang /* Version for when blocks are 3 by 3  */
219649b5e25fSSatish Balay #undef __FUNC__
21976f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3"
21986f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3(Mat A,Mat *B)
219949b5e25fSSatish Balay {
220049b5e25fSSatish Balay   Mat                C = *B;
2201a1723e09SHong Zhang   Mat_SeqSBAIJ       *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data;
2202a1723e09SHong Zhang   IS                 perm = b->row;
2203a1723e09SHong Zhang   int                *perm_ptr,ierr,i,j,mbs=a->mbs,*bi=b->i,*bj=b->j;
2204a1723e09SHong Zhang   int                *ai,*aj,*a2anew,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili;
2205a1723e09SHong Zhang   MatScalar          *ba = b->a,*aa,*ap,*dk,*uik;
2206a1723e09SHong Zhang   MatScalar          *u,*diag,*rtmp,*rtmp_ptr;
220749b5e25fSSatish Balay 
220849b5e25fSSatish Balay   PetscFunctionBegin;
2209a1723e09SHong Zhang   /* initialization */
2210a1723e09SHong Zhang   rtmp  = (MatScalar*)PetscMalloc(9*mbs*sizeof(MatScalar));CHKPTRQ(rtmp);
2211a1723e09SHong Zhang   ierr = PetscMemzero(rtmp,9*mbs*sizeof(MatScalar));CHKERRQ(ierr);
2212a1723e09SHong Zhang   il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il);
2213a1723e09SHong Zhang   jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl);
2214a1723e09SHong Zhang   for (i=0; i<mbs; i++) {
2215a1723e09SHong Zhang     jl[i] = mbs; il[0] = 0;
2216a1723e09SHong Zhang   }
2217a1723e09SHong Zhang   dk  = (MatScalar*)PetscMalloc(9*sizeof(MatScalar));CHKPTRQ(dk);
2218a1723e09SHong Zhang   uik = (MatScalar*)PetscMalloc(9*sizeof(MatScalar));CHKPTRQ(uik);
2219a1723e09SHong Zhang   ierr  = ISGetIndices(perm,&perm_ptr);CHKERRQ(ierr);
222049b5e25fSSatish Balay 
2221a1723e09SHong Zhang   /* check permutation */
2222a1723e09SHong Zhang   if (!a->permute){
2223a1723e09SHong Zhang     ai = a->i; aj = a->j; aa = a->a;
2224a1723e09SHong Zhang   } else {
2225a1723e09SHong Zhang     ai = a->inew; aj = a->jnew;
2226a1723e09SHong Zhang     aa = (MatScalar*)PetscMalloc(9*ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa);
2227a1723e09SHong Zhang     ierr = PetscMemcpy(aa,a->a,9*ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr);
2228a1723e09SHong Zhang     a2anew  = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(a2anew);
2229a1723e09SHong Zhang     ierr= PetscMemcpy(a2anew,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr);
223049b5e25fSSatish Balay 
2231a1723e09SHong Zhang     for (i=0; i<mbs; i++){
2232a1723e09SHong Zhang       jmin = ai[i]; jmax = ai[i+1];
2233a1723e09SHong Zhang       for (j=jmin; j<jmax; j++){
2234a1723e09SHong Zhang         while (a2anew[j] != j){
2235a1723e09SHong Zhang           k = a2anew[j]; a2anew[j] = a2anew[k]; a2anew[k] = k;
2236a1723e09SHong Zhang           for (k1=0; k1<9; k1++){
2237a1723e09SHong Zhang             dk[k1]       = aa[k*9+k1];
2238a1723e09SHong Zhang             aa[k*9+k1] = aa[j*9+k1];
2239a1723e09SHong Zhang             aa[j*9+k1] = dk[k1];
2240a1723e09SHong Zhang           }
2241a1723e09SHong Zhang         }
2242a1723e09SHong Zhang         /* transform columnoriented blocks that lie in the lower triangle to roworiented blocks */
2243a1723e09SHong Zhang         if (i > aj[j]){
224447c40530SHong Zhang           /* printf("change orientation, row: %d, col: %d\n",i,aj[j]); */
2245a1723e09SHong Zhang           ap = aa + j*9;                     /* ptr to the beginning of j-th block of aa */
2246a1723e09SHong Zhang           for (k=0; k<9; k++) dk[k] = ap[k]; /* dk <- j-th block of aa */
2247a1723e09SHong Zhang           for (k=0; k<3; k++){               /* j-th block of aa <- dk^T */
224847c40530SHong Zhang             for (k1=0; k1<3; k1++) *ap++ = dk[k + 3*k1];
2249a1723e09SHong Zhang           }
2250a1723e09SHong Zhang         }
2251a1723e09SHong Zhang       }
2252a1723e09SHong Zhang     }
2253a1723e09SHong Zhang     ierr = PetscFree(a2anew);CHKERRA(ierr);
2254a1723e09SHong Zhang   }
225549b5e25fSSatish Balay 
2256a1723e09SHong Zhang   /* for each row k */
2257a1723e09SHong Zhang   for (k = 0; k<mbs; k++){
225849b5e25fSSatish Balay 
2259a1723e09SHong Zhang     /*initialize k-th row with elements nonzero in row perm(k) of A */
2260a1723e09SHong Zhang     jmin = ai[perm_ptr[k]]; jmax = ai[perm_ptr[k]+1];
2261a1723e09SHong Zhang     if (jmin < jmax) {
2262a1723e09SHong Zhang       ap = aa + jmin*9;
2263a1723e09SHong Zhang       for (j = jmin; j < jmax; j++){
2264a1723e09SHong Zhang         vj = perm_ptr[aj[j]];         /* block col. index */
2265a1723e09SHong Zhang         rtmp_ptr = rtmp + vj*9;
2266a1723e09SHong Zhang         for (i=0; i<9; i++) *rtmp_ptr++ = *ap++;
2267a1723e09SHong Zhang       }
2268a1723e09SHong Zhang     }
226949b5e25fSSatish Balay 
2270a1723e09SHong Zhang     /* modify k-th row by adding in those rows i with U(i,k) != 0 */
2271a1723e09SHong Zhang     ierr = PetscMemcpy(dk,rtmp+k*9,9*sizeof(MatScalar));CHKERRQ(ierr);
2272a1723e09SHong Zhang     i = jl[k]; /* first row to be added to k_th row  */
2273a1723e09SHong Zhang 
2274a1723e09SHong Zhang     while (i < mbs){
2275a1723e09SHong Zhang       nexti = jl[i]; /* next row to be added to k_th row */
2276a1723e09SHong Zhang 
2277a1723e09SHong Zhang       /* compute multiplier */
2278a1723e09SHong Zhang       ili = il[i];  /* index of first nonzero element in U(i,k:bms-1) */
2279a1723e09SHong Zhang 
2280a1723e09SHong Zhang       /* uik = -inv(Di)*U_bar(i,k) */
2281a1723e09SHong Zhang       diag = ba + i*9;
2282a1723e09SHong Zhang       u    = ba + ili*9;
2283a1723e09SHong Zhang 
2284a1723e09SHong Zhang       uik[0] = -(diag[0]*u[0] + diag[3]*u[1] + diag[6]*u[2]);
2285a1723e09SHong Zhang       uik[1] = -(diag[1]*u[0] + diag[4]*u[1] + diag[7]*u[2]);
2286a1723e09SHong Zhang       uik[2] = -(diag[2]*u[0] + diag[5]*u[1] + diag[8]*u[2]);
2287a1723e09SHong Zhang 
2288a1723e09SHong Zhang       uik[3] = -(diag[0]*u[3] + diag[3]*u[4] + diag[6]*u[5]);
2289a1723e09SHong Zhang       uik[4] = -(diag[1]*u[3] + diag[4]*u[4] + diag[7]*u[5]);
2290a1723e09SHong Zhang       uik[5] = -(diag[2]*u[3] + diag[5]*u[4] + diag[8]*u[5]);
2291a1723e09SHong Zhang 
2292a1723e09SHong Zhang       uik[6] = -(diag[0]*u[6] + diag[3]*u[7] + diag[6]*u[8]);
2293a1723e09SHong Zhang       uik[7] = -(diag[1]*u[6] + diag[4]*u[7] + diag[7]*u[8]);
2294a1723e09SHong Zhang       uik[8] = -(diag[2]*u[6] + diag[5]*u[7] + diag[8]*u[8]);
2295a1723e09SHong Zhang 
2296a1723e09SHong Zhang       /* update D(k) += -U(i,k)^T * U_bar(i,k) */
2297a1723e09SHong Zhang       dk[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2];
2298a1723e09SHong Zhang       dk[1] += uik[3]*u[0] + uik[4]*u[1] + uik[5]*u[2];
2299a1723e09SHong Zhang       dk[2] += uik[6]*u[0] + uik[7]*u[1] + uik[8]*u[2];
2300a1723e09SHong Zhang 
2301a1723e09SHong Zhang       dk[3] += uik[0]*u[3] + uik[1]*u[4] + uik[2]*u[5];
2302a1723e09SHong Zhang       dk[4] += uik[3]*u[3] + uik[4]*u[4] + uik[5]*u[5];
2303a1723e09SHong Zhang       dk[5] += uik[6]*u[3] + uik[7]*u[4] + uik[8]*u[5];
2304a1723e09SHong Zhang 
2305a1723e09SHong Zhang       dk[6] += uik[0]*u[6] + uik[1]*u[7] + uik[2]*u[8];
2306a1723e09SHong Zhang       dk[7] += uik[3]*u[6] + uik[4]*u[7] + uik[5]*u[8];
2307a1723e09SHong Zhang       dk[8] += uik[6]*u[6] + uik[7]*u[7] + uik[8]*u[8];
2308a1723e09SHong Zhang 
2309a1723e09SHong Zhang       /* update -U(i,k) */
2310a1723e09SHong Zhang       ierr = PetscMemcpy(ba+ili*9,uik,9*sizeof(MatScalar));CHKERRQ(ierr);
2311a1723e09SHong Zhang 
2312a1723e09SHong Zhang       /* add multiple of row i to k-th row ... */
2313a1723e09SHong Zhang       jmin = ili + 1; jmax = bi[i+1];
2314a1723e09SHong Zhang       if (jmin < jmax){
2315a1723e09SHong Zhang         for (j=jmin; j<jmax; j++) {
2316a1723e09SHong Zhang           /* rtmp += -U(i,k)^T * U_bar(i,j) */
2317a1723e09SHong Zhang           rtmp_ptr = rtmp + bj[j]*9;
2318a1723e09SHong Zhang           u = ba + j*9;
2319a1723e09SHong Zhang           rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2];
2320a1723e09SHong Zhang           rtmp_ptr[1] += uik[3]*u[0] + uik[4]*u[1] + uik[5]*u[2];
2321a1723e09SHong Zhang           rtmp_ptr[2] += uik[6]*u[0] + uik[7]*u[1] + uik[8]*u[2];
2322a1723e09SHong Zhang 
2323a1723e09SHong Zhang           rtmp_ptr[3] += uik[0]*u[3] + uik[1]*u[4] + uik[2]*u[5];
2324a1723e09SHong Zhang           rtmp_ptr[4] += uik[3]*u[3] + uik[4]*u[4] + uik[5]*u[5];
2325a1723e09SHong Zhang           rtmp_ptr[5] += uik[6]*u[3] + uik[7]*u[4] + uik[8]*u[5];
2326a1723e09SHong Zhang 
2327a1723e09SHong Zhang           rtmp_ptr[6] += uik[0]*u[6] + uik[1]*u[7] + uik[2]*u[8];
2328a1723e09SHong Zhang           rtmp_ptr[7] += uik[3]*u[6] + uik[4]*u[7] + uik[5]*u[8];
2329a1723e09SHong Zhang           rtmp_ptr[8] += uik[6]*u[6] + uik[7]*u[7] + uik[8]*u[8];
233049b5e25fSSatish Balay         }
2331a1723e09SHong Zhang 
2332a1723e09SHong Zhang         /* ... add i to row list for next nonzero entry */
2333a1723e09SHong Zhang         il[i] = jmin;             /* update il(i) in column k+1, ... mbs-1 */
2334a1723e09SHong Zhang         j     = bj[jmin];
2335a1723e09SHong Zhang         jl[i] = jl[j]; jl[j] = i; /* update jl */
233649b5e25fSSatish Balay       }
2337a1723e09SHong Zhang       i = nexti;
233849b5e25fSSatish Balay     }
2339a1723e09SHong Zhang 
2340a1723e09SHong Zhang     /* save nonzero entries in k-th row of U ... */
2341a1723e09SHong Zhang 
234249b5e25fSSatish Balay     /* invert diagonal block */
2343a1723e09SHong Zhang     diag = ba+k*9;
2344a1723e09SHong Zhang     ierr = PetscMemcpy(diag,dk,9*sizeof(MatScalar));CHKERRQ(ierr);
2345a1723e09SHong Zhang     ierr = Kernel_A_gets_inverse_A_3(diag);CHKERRQ(ierr);
2346a1723e09SHong Zhang 
2347a1723e09SHong Zhang     jmin = bi[k]; jmax = bi[k+1];
2348a1723e09SHong Zhang     if (jmin < jmax) {
2349a1723e09SHong Zhang       for (j=jmin; j<jmax; j++){
2350a1723e09SHong Zhang          vj = bj[j];           /* block col. index of U */
2351a1723e09SHong Zhang          u   = ba + j*9;
2352a1723e09SHong Zhang          rtmp_ptr = rtmp + vj*9;
2353a1723e09SHong Zhang          for (k1=0; k1<9; k1++){
2354a1723e09SHong Zhang            *u++        = *rtmp_ptr;
2355a1723e09SHong Zhang            *rtmp_ptr++ = 0.0;
2356a1723e09SHong Zhang          }
2357a1723e09SHong Zhang       }
2358a1723e09SHong Zhang 
2359a1723e09SHong Zhang       /* ... add k to row list for first nonzero entry in k-th row */
2360a1723e09SHong Zhang       il[k] = jmin;
2361a1723e09SHong Zhang       i     = bj[jmin];
2362a1723e09SHong Zhang       jl[k] = jl[i]; jl[i] = k;
2363a1723e09SHong Zhang     }
236449b5e25fSSatish Balay   }
236549b5e25fSSatish Balay 
236649b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
2367a1723e09SHong Zhang   ierr = PetscFree(il);CHKERRQ(ierr);
2368a1723e09SHong Zhang   ierr = PetscFree(jl);CHKERRQ(ierr);
2369a1723e09SHong Zhang   ierr = PetscFree(dk);CHKERRQ(ierr);
2370a1723e09SHong Zhang   ierr = PetscFree(uik);CHKERRQ(ierr);
2371a1723e09SHong Zhang   if (a->permute){
2372a1723e09SHong Zhang     ierr = PetscFree(aa);CHKERRQ(ierr);
2373a1723e09SHong Zhang   }
2374a1723e09SHong Zhang 
2375a1723e09SHong Zhang   ierr = ISRestoreIndices(perm,&perm_ptr);CHKERRQ(ierr);
2376a1723e09SHong Zhang   C->factor    = FACTOR_CHOLESKY;
237749b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
23787a05c331SHong Zhang   C->preallocated = PETSC_TRUE;
2379effa298cSHong Zhang   PLogFlops(1.3333*27*b->mbs); /* from inverting diagonal blocks */
238049b5e25fSSatish Balay   PetscFunctionReturn(0);
238149b5e25fSSatish Balay }
2382a1723e09SHong Zhang 
238349b5e25fSSatish Balay /*
238449b5e25fSSatish Balay       Version for when blocks are 3 by 3 Using natural ordering
238549b5e25fSSatish Balay */
238649b5e25fSSatish Balay #undef __FUNC__
23876f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering"
23886f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering(Mat A,Mat *B)
238949b5e25fSSatish Balay {
239049b5e25fSSatish Balay   Mat                C = *B;
239149b5e25fSSatish Balay   Mat_SeqBAIJ        *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
239249b5e25fSSatish Balay   int                ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
239349b5e25fSSatish Balay   int                *ajtmpold,*ajtmp,nz,row;
239449b5e25fSSatish Balay   int                *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj;
239549b5e25fSSatish Balay   MatScalar          *pv,*v,*rtmp,*pc,*w,*x;
239649b5e25fSSatish Balay   MatScalar          p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4;
239749b5e25fSSatish Balay   MatScalar          p5,p6,p7,p8,p9,x5,x6,x7,x8,x9;
239849b5e25fSSatish Balay   MatScalar          *ba = b->a,*aa = a->a;
239949b5e25fSSatish Balay 
240049b5e25fSSatish Balay   PetscFunctionBegin;
240149b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(9*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
240249b5e25fSSatish Balay 
240349b5e25fSSatish Balay   for (i=0; i<n; i++) {
240449b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
240549b5e25fSSatish Balay     ajtmp = bj + bi[i];
240649b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
240749b5e25fSSatish Balay       x = rtmp+9*ajtmp[j];
240849b5e25fSSatish Balay       x[0]  = x[1]  = x[2]  = x[3]  = x[4]  = x[5]  = x[6] = x[7] = x[8] = 0.0;
240949b5e25fSSatish Balay     }
241049b5e25fSSatish Balay     /* load in initial (unfactored row) */
241149b5e25fSSatish Balay     nz       = ai[i+1] - ai[i];
241249b5e25fSSatish Balay     ajtmpold = aj + ai[i];
241349b5e25fSSatish Balay     v        = aa + 9*ai[i];
241449b5e25fSSatish Balay     for (j=0; j<nz; j++) {
241549b5e25fSSatish Balay       x    = rtmp+9*ajtmpold[j];
241649b5e25fSSatish Balay       x[0]  = v[0];  x[1]  = v[1];  x[2]  = v[2];  x[3]  = v[3];
241749b5e25fSSatish Balay       x[4]  = v[4];  x[5]  = v[5];  x[6]  = v[6];  x[7]  = v[7];  x[8]  = v[8];
241849b5e25fSSatish Balay       v    += 9;
241949b5e25fSSatish Balay     }
242049b5e25fSSatish Balay     row = *ajtmp++;
242149b5e25fSSatish Balay     while (row < i) {
242249b5e25fSSatish Balay       pc  = rtmp + 9*row;
242349b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
242449b5e25fSSatish Balay       p5  = pc[4];  p6  = pc[5];  p7  = pc[6];  p8  = pc[7];  p9  = pc[8];
242549b5e25fSSatish Balay       if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 ||
242649b5e25fSSatish Balay           p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0) {
242749b5e25fSSatish Balay         pv = ba + 9*diag_offset[row];
242849b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
242949b5e25fSSatish Balay         x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
243049b5e25fSSatish Balay         x5  = pv[4];  x6  = pv[5];  x7  = pv[6];  x8  = pv[7];  x9  = pv[8];
243149b5e25fSSatish Balay         pc[0] = m1 = p1*x1 + p4*x2 + p7*x3;
243249b5e25fSSatish Balay         pc[1] = m2 = p2*x1 + p5*x2 + p8*x3;
243349b5e25fSSatish Balay         pc[2] = m3 = p3*x1 + p6*x2 + p9*x3;
243449b5e25fSSatish Balay 
243549b5e25fSSatish Balay         pc[3] = m4 = p1*x4 + p4*x5 + p7*x6;
243649b5e25fSSatish Balay         pc[4] = m5 = p2*x4 + p5*x5 + p8*x6;
243749b5e25fSSatish Balay         pc[5] = m6 = p3*x4 + p6*x5 + p9*x6;
243849b5e25fSSatish Balay 
243949b5e25fSSatish Balay         pc[6] = m7 = p1*x7 + p4*x8 + p7*x9;
244049b5e25fSSatish Balay         pc[7] = m8 = p2*x7 + p5*x8 + p8*x9;
244149b5e25fSSatish Balay         pc[8] = m9 = p3*x7 + p6*x8 + p9*x9;
244249b5e25fSSatish Balay 
244349b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
244449b5e25fSSatish Balay         pv += 9;
244549b5e25fSSatish Balay         for (j=0; j<nz; j++) {
244649b5e25fSSatish Balay           x1   = pv[0];  x2  = pv[1];   x3 = pv[2];  x4  = pv[3];
244749b5e25fSSatish Balay           x5   = pv[4];  x6  = pv[5];   x7 = pv[6];  x8  = pv[7]; x9 = pv[8];
244849b5e25fSSatish Balay           x    = rtmp + 9*pj[j];
244949b5e25fSSatish Balay           x[0] -= m1*x1 + m4*x2 + m7*x3;
245049b5e25fSSatish Balay           x[1] -= m2*x1 + m5*x2 + m8*x3;
245149b5e25fSSatish Balay           x[2] -= m3*x1 + m6*x2 + m9*x3;
245249b5e25fSSatish Balay 
245349b5e25fSSatish Balay           x[3] -= m1*x4 + m4*x5 + m7*x6;
245449b5e25fSSatish Balay           x[4] -= m2*x4 + m5*x5 + m8*x6;
245549b5e25fSSatish Balay           x[5] -= m3*x4 + m6*x5 + m9*x6;
245649b5e25fSSatish Balay 
245749b5e25fSSatish Balay           x[6] -= m1*x7 + m4*x8 + m7*x9;
245849b5e25fSSatish Balay           x[7] -= m2*x7 + m5*x8 + m8*x9;
245949b5e25fSSatish Balay           x[8] -= m3*x7 + m6*x8 + m9*x9;
246049b5e25fSSatish Balay           pv   += 9;
246149b5e25fSSatish Balay         }
246249b5e25fSSatish Balay         PLogFlops(54*nz+36);
246349b5e25fSSatish Balay       }
246449b5e25fSSatish Balay       row = *ajtmp++;
246549b5e25fSSatish Balay     }
246649b5e25fSSatish Balay     /* finished row so stick it into b->a */
246749b5e25fSSatish Balay     pv = ba + 9*bi[i];
246849b5e25fSSatish Balay     pj = bj + bi[i];
246949b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
247049b5e25fSSatish Balay     for (j=0; j<nz; j++) {
247149b5e25fSSatish Balay       x      = rtmp+9*pj[j];
247249b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
247349b5e25fSSatish Balay       pv[4]  = x[4];  pv[5]  = x[5];  pv[6]  = x[6];  pv[7]  = x[7]; pv[8] = x[8];
247449b5e25fSSatish Balay       pv   += 9;
247549b5e25fSSatish Balay     }
247649b5e25fSSatish Balay     /* invert diagonal block */
247749b5e25fSSatish Balay     w = ba + 9*diag_offset[i];
247849b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_3(w);CHKERRQ(ierr);
247949b5e25fSSatish Balay   }
248049b5e25fSSatish Balay 
248149b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
2482effa298cSHong Zhang   C->factor    = FACTOR_CHOLESKY;
248349b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
24845c0bcdfcSHong Zhang   C->preallocated = PETSC_TRUE;
248549b5e25fSSatish Balay   PLogFlops(1.3333*27*b->mbs); /* from inverting diagonal blocks */
248649b5e25fSSatish Balay   PetscFunctionReturn(0);
248749b5e25fSSatish Balay }
248849b5e25fSSatish Balay 
248949b5e25fSSatish Balay /*
2490fcf159c0SHong Zhang     Numeric U^T*D*U factorization for SBAIJ format. Modified from SNF of YSMP.
2491cc0c071aSHong Zhang     Version for blocks 2 by 2.
249249b5e25fSSatish Balay */
249349b5e25fSSatish Balay #undef __FUNC__
24946f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2"
24956f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2(Mat A,Mat *B)
249649b5e25fSSatish Balay {
249749b5e25fSSatish Balay   Mat                C = *B;
249891602c66SHong Zhang   Mat_SeqSBAIJ       *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data;
2499cc0c071aSHong Zhang   IS                 perm = b->row;
2500cc0c071aSHong Zhang   int                *perm_ptr,ierr,i,j,mbs=a->mbs,*bi=b->i,*bj=b->j;
2501cc0c071aSHong Zhang   int                *ai,*aj,*a2anew,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili;
2502a1723e09SHong Zhang   MatScalar          *ba = b->a,*aa,*ap,*dk,*uik;
2503cc0c071aSHong Zhang   MatScalar          *u,*diag,*rtmp,*rtmp_ptr;
250449b5e25fSSatish Balay 
250549b5e25fSSatish Balay   PetscFunctionBegin;
250649b5e25fSSatish Balay 
250791602c66SHong Zhang   /* initialization */
250891602c66SHong Zhang   /* il and jl record the first nonzero element in each row of the accessing
250991602c66SHong Zhang      window U(0:k, k:mbs-1).
251091602c66SHong Zhang      jl:    list of rows to be added to uneliminated rows
251191602c66SHong Zhang             i>= k: jl(i) is the first row to be added to row i
251291602c66SHong Zhang             i<  k: jl(i) is the row following row i in some list of rows
251391602c66SHong Zhang             jl(i) = mbs indicates the end of a list
251491602c66SHong Zhang      il(i): points to the first nonzero element in columns k,...,mbs-1 of
251591602c66SHong Zhang             row i of U */
2516cc0c071aSHong Zhang   rtmp  = (MatScalar*)PetscMalloc(4*mbs*sizeof(MatScalar));CHKPTRQ(rtmp);
2517cc0c071aSHong Zhang   ierr = PetscMemzero(rtmp,4*mbs*sizeof(MatScalar));CHKERRQ(ierr);
251891602c66SHong Zhang   il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il);
251991602c66SHong Zhang   jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl);
252091602c66SHong Zhang   for (i=0; i<mbs; i++) {
25213845f261SHong Zhang     jl[i] = mbs; il[0] = 0;
252291602c66SHong Zhang   }
2523cc0c071aSHong Zhang   dk  = (MatScalar*)PetscMalloc(4*sizeof(MatScalar));CHKPTRQ(dk);
2524cc0c071aSHong Zhang   uik = (MatScalar*)PetscMalloc(4*sizeof(MatScalar));CHKPTRQ(uik);
2525cc0c071aSHong Zhang   ierr  = ISGetIndices(perm,&perm_ptr);CHKERRQ(ierr);
2526cc0c071aSHong Zhang 
2527cc0c071aSHong Zhang   /* check permutation */
2528cc0c071aSHong Zhang   if (!a->permute){
2529cc0c071aSHong Zhang     ai = a->i; aj = a->j; aa = a->a;
2530cc0c071aSHong Zhang   } else {
2531cc0c071aSHong Zhang     ai = a->inew; aj = a->jnew;
2532cc0c071aSHong Zhang     aa = (MatScalar*)PetscMalloc(4*ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa);
2533cc0c071aSHong Zhang     ierr = PetscMemcpy(aa,a->a,4*ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr);
2534cc0c071aSHong Zhang     a2anew  = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(a2anew);
2535cc0c071aSHong Zhang     ierr= PetscMemcpy(a2anew,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr);
2536cc0c071aSHong Zhang 
2537cc0c071aSHong Zhang     for (i=0; i<mbs; i++){
2538cc0c071aSHong Zhang       jmin = ai[i]; jmax = ai[i+1];
2539cc0c071aSHong Zhang       for (j=jmin; j<jmax; j++){
2540cc0c071aSHong Zhang         while (a2anew[j] != j){
2541cc0c071aSHong Zhang           k = a2anew[j]; a2anew[j] = a2anew[k]; a2anew[k] = k;
2542cc0c071aSHong Zhang           for (k1=0; k1<4; k1++){
2543cc0c071aSHong Zhang             dk[k1]       = aa[k*4+k1];
2544cc0c071aSHong Zhang             aa[k*4+k1] = aa[j*4+k1];
2545cc0c071aSHong Zhang             aa[j*4+k1] = dk[k1];
2546cc0c071aSHong Zhang           }
2547cc0c071aSHong Zhang         }
2548cc0c071aSHong Zhang         /* transform columnoriented blocks that lie in the lower triangle to roworiented blocks */
2549cc0c071aSHong Zhang         if (i > aj[j]){
2550a1723e09SHong Zhang           /* printf("change orientation, row: %d, col: %d\n",i,aj[j]); */
2551cc0c071aSHong Zhang           ap = aa + j*4;     /* ptr to the beginning of the block */
2552cc0c071aSHong Zhang           dk[1] = ap[1];     /* swap ap[1] and ap[2] */
2553cc0c071aSHong Zhang           ap[1] = ap[2];
2554cc0c071aSHong Zhang           ap[2] = dk[1];
2555cc0c071aSHong Zhang         }
2556cc0c071aSHong Zhang       }
2557cc0c071aSHong Zhang     }
2558cc0c071aSHong Zhang     ierr = PetscFree(a2anew);CHKERRA(ierr);
2559cc0c071aSHong Zhang   }
25603845f261SHong Zhang 
256191602c66SHong Zhang   /* for each row k */
256291602c66SHong Zhang   for (k = 0; k<mbs; k++){
256391602c66SHong Zhang 
256491602c66SHong Zhang     /*initialize k-th row with elements nonzero in row perm(k) of A */
2565cc0c071aSHong Zhang     jmin = ai[perm_ptr[k]]; jmax = ai[perm_ptr[k]+1];
256691602c66SHong Zhang     if (jmin < jmax) {
2567cc0c071aSHong Zhang       ap = aa + jmin*4;
256891602c66SHong Zhang       for (j = jmin; j < jmax; j++){
2569cc0c071aSHong Zhang         vj = perm_ptr[aj[j]];         /* block col. index */
2570cc0c071aSHong Zhang         rtmp_ptr = rtmp + vj*4;
2571cc0c071aSHong Zhang         for (i=0; i<4; i++) *rtmp_ptr++ = *ap++;
257291602c66SHong Zhang       }
257391602c66SHong Zhang     }
257491602c66SHong Zhang 
257591602c66SHong Zhang     /* modify k-th row by adding in those rows i with U(i,k) != 0 */
2576cc0c071aSHong Zhang     ierr = PetscMemcpy(dk,rtmp+k*4,4*sizeof(MatScalar));CHKERRQ(ierr);
257791602c66SHong Zhang     i = jl[k]; /* first row to be added to k_th row  */
257891602c66SHong Zhang 
257991602c66SHong Zhang     while (i < mbs){
258091602c66SHong Zhang       nexti = jl[i]; /* next row to be added to k_th row */
258191602c66SHong Zhang 
25823845f261SHong Zhang       /* compute multiplier */
258391602c66SHong Zhang       ili = il[i];  /* index of first nonzero element in U(i,k:bms-1) */
25843845f261SHong Zhang 
25853845f261SHong Zhang       /* uik = -inv(Di)*U_bar(i,k): - ba[ili]*ba[i] */
2586cc0c071aSHong Zhang       diag = ba + i*4;
2587cc0c071aSHong Zhang       u    = ba + ili*4;
2588cc0c071aSHong Zhang       uik[0] = -(diag[0]*u[0] + diag[2]*u[1]);
2589cc0c071aSHong Zhang       uik[1] = -(diag[1]*u[0] + diag[3]*u[1]);
2590cc0c071aSHong Zhang       uik[2] = -(diag[0]*u[2] + diag[2]*u[3]);
2591cc0c071aSHong Zhang       uik[3] = -(diag[1]*u[2] + diag[3]*u[3]);
25923845f261SHong Zhang 
25933845f261SHong Zhang       /* update D(k) += -U(i,k)^T * U_bar(i,k): dk += uik*ba[ili] */
2594cc0c071aSHong Zhang       dk[0] += uik[0]*u[0] + uik[1]*u[1];
2595cc0c071aSHong Zhang       dk[1] += uik[2]*u[0] + uik[3]*u[1];
2596cc0c071aSHong Zhang       dk[2] += uik[0]*u[2] + uik[1]*u[3];
2597cc0c071aSHong Zhang       dk[3] += uik[2]*u[2] + uik[3]*u[3];
25983845f261SHong Zhang 
25993845f261SHong Zhang       /* update -U(i,k): ba[ili] = uik */
2600cc0c071aSHong Zhang       ierr = PetscMemcpy(ba+ili*4,uik,4*sizeof(MatScalar));CHKERRQ(ierr);
260191602c66SHong Zhang 
260291602c66SHong Zhang       /* add multiple of row i to k-th row ... */
260391602c66SHong Zhang       jmin = ili + 1; jmax = bi[i+1];
260491602c66SHong Zhang       if (jmin < jmax){
26053845f261SHong Zhang         for (j=jmin; j<jmax; j++) {
26063845f261SHong Zhang           /* rtmp += -U(i,k)^T * U_bar(i,j): rtmp[bj[j]] += uik*ba[j]; */
2607cc0c071aSHong Zhang           rtmp_ptr = rtmp + bj[j]*4;
2608cc0c071aSHong Zhang           u = ba + j*4;
2609cc0c071aSHong Zhang           rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1];
2610cc0c071aSHong Zhang           rtmp_ptr[1] += uik[2]*u[0] + uik[3]*u[1];
2611cc0c071aSHong Zhang           rtmp_ptr[2] += uik[0]*u[2] + uik[1]*u[3];
2612cc0c071aSHong Zhang           rtmp_ptr[3] += uik[2]*u[2] + uik[3]*u[3];
26133845f261SHong Zhang         }
26143845f261SHong Zhang 
261591602c66SHong Zhang         /* ... add i to row list for next nonzero entry */
261691602c66SHong Zhang         il[i] = jmin;             /* update il(i) in column k+1, ... mbs-1 */
261791602c66SHong Zhang         j     = bj[jmin];
261891602c66SHong Zhang         jl[i] = jl[j]; jl[j] = i; /* update jl */
261991602c66SHong Zhang       }
2620a1723e09SHong Zhang       i = nexti;
262191602c66SHong Zhang     }
2622cc0c071aSHong Zhang 
262391602c66SHong Zhang     /* save nonzero entries in k-th row of U ... */
26243845f261SHong Zhang 
2625cc0c071aSHong Zhang     /* invert diagonal block */
2626cc0c071aSHong Zhang     diag = ba+k*4;
2627cc0c071aSHong Zhang     ierr = PetscMemcpy(diag,dk,4*sizeof(MatScalar));CHKERRQ(ierr);
26283845f261SHong Zhang     ierr = Kernel_A_gets_inverse_A_2(diag);CHKERRQ(ierr);
26293845f261SHong Zhang 
263091602c66SHong Zhang     jmin = bi[k]; jmax = bi[k+1];
263191602c66SHong Zhang     if (jmin < jmax) {
263291602c66SHong Zhang       for (j=jmin; j<jmax; j++){
2633cc0c071aSHong Zhang          vj = bj[j];           /* block col. index of U */
2634cc0c071aSHong Zhang          u   = ba + j*4;
2635cc0c071aSHong Zhang          rtmp_ptr = rtmp + vj*4;
2636cc0c071aSHong Zhang          for (k1=0; k1<4; k1++){
2637cc0c071aSHong Zhang            *u++        = *rtmp_ptr;
2638cc0c071aSHong Zhang            *rtmp_ptr++ = 0.0;
2639cc0c071aSHong Zhang          }
2640cc0c071aSHong Zhang       }
26413845f261SHong Zhang 
264291602c66SHong Zhang       /* ... add k to row list for first nonzero entry in k-th row */
264391602c66SHong Zhang       il[k] = jmin;
264491602c66SHong Zhang       i     = bj[jmin];
264591602c66SHong Zhang       jl[k] = jl[i]; jl[i] = k;
264691602c66SHong Zhang     }
264791602c66SHong Zhang   }
26483845f261SHong Zhang 
264949b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
265091602c66SHong Zhang   ierr = PetscFree(il);CHKERRQ(ierr);
265191602c66SHong Zhang   ierr = PetscFree(jl);CHKERRQ(ierr);
26523845f261SHong Zhang   ierr = PetscFree(dk);CHKERRQ(ierr);
26533845f261SHong Zhang   ierr = PetscFree(uik);CHKERRQ(ierr);
265491602c66SHong Zhang   if (a->permute){
265591602c66SHong Zhang     ierr = PetscFree(aa);CHKERRQ(ierr);
265691602c66SHong Zhang   }
265791602c66SHong Zhang 
2658cc0c071aSHong Zhang   ierr = ISRestoreIndices(perm,&perm_ptr);CHKERRQ(ierr);
265991602c66SHong Zhang   C->factor    = FACTOR_CHOLESKY;
266049b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
26615c0bcdfcSHong Zhang   C->preallocated = PETSC_TRUE;
2662effa298cSHong Zhang   PLogFlops(1.3333*8*b->mbs); /* from inverting diagonal blocks */
266349b5e25fSSatish Balay   PetscFunctionReturn(0);
266449b5e25fSSatish Balay }
266591602c66SHong Zhang 
266649b5e25fSSatish Balay /*
266749b5e25fSSatish Balay       Version for when blocks are 2 by 2 Using natural ordering
266849b5e25fSSatish Balay */
266949b5e25fSSatish Balay #undef __FUNC__
26706f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering"
26716f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering(Mat A,Mat *B)
267249b5e25fSSatish Balay {
267349b5e25fSSatish Balay   Mat                C = *B;
267449b5e25fSSatish Balay   Mat_SeqBAIJ        *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data;
267549b5e25fSSatish Balay   int                ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j;
267649b5e25fSSatish Balay   int                *ajtmpold,*ajtmp,nz,row;
267749b5e25fSSatish Balay   int                *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj;
267849b5e25fSSatish Balay   MatScalar          *pv,*v,*rtmp,*pc,*w,*x;
267949b5e25fSSatish Balay   MatScalar          p1,p2,p3,p4,m1,m2,m3,m4,x1,x2,x3,x4;
268049b5e25fSSatish Balay   MatScalar          *ba = b->a,*aa = a->a;
268149b5e25fSSatish Balay 
268249b5e25fSSatish Balay   PetscFunctionBegin;
268349b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(4*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp);
268449b5e25fSSatish Balay 
268549b5e25fSSatish Balay   for (i=0; i<n; i++) {
268649b5e25fSSatish Balay     nz    = bi[i+1] - bi[i];
268749b5e25fSSatish Balay     ajtmp = bj + bi[i];
268849b5e25fSSatish Balay     for  (j=0; j<nz; j++) {
268949b5e25fSSatish Balay       x = rtmp+4*ajtmp[j];
269049b5e25fSSatish Balay       x[0]  = x[1]  = x[2]  = x[3]  = 0.0;
269149b5e25fSSatish Balay     }
269249b5e25fSSatish Balay     /* load in initial (unfactored row) */
269349b5e25fSSatish Balay     nz       = ai[i+1] - ai[i];
269449b5e25fSSatish Balay     ajtmpold = aj + ai[i];
269549b5e25fSSatish Balay     v        = aa + 4*ai[i];
269649b5e25fSSatish Balay     for (j=0; j<nz; j++) {
269749b5e25fSSatish Balay       x    = rtmp+4*ajtmpold[j];
269849b5e25fSSatish Balay       x[0]  = v[0];  x[1]  = v[1];  x[2]  = v[2];  x[3]  = v[3];
269949b5e25fSSatish Balay       v    += 4;
270049b5e25fSSatish Balay     }
270149b5e25fSSatish Balay     row = *ajtmp++;
270249b5e25fSSatish Balay     while (row < i) {
270349b5e25fSSatish Balay       pc  = rtmp + 4*row;
270449b5e25fSSatish Balay       p1  = pc[0];  p2  = pc[1];  p3  = pc[2];  p4  = pc[3];
270549b5e25fSSatish Balay       if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0) {
270649b5e25fSSatish Balay         pv = ba + 4*diag_offset[row];
270749b5e25fSSatish Balay         pj = bj + diag_offset[row] + 1;
270849b5e25fSSatish Balay         x1  = pv[0];  x2  = pv[1];  x3  = pv[2];  x4  = pv[3];
270949b5e25fSSatish Balay         pc[0] = m1 = p1*x1 + p3*x2;
271049b5e25fSSatish Balay         pc[1] = m2 = p2*x1 + p4*x2;
271149b5e25fSSatish Balay         pc[2] = m3 = p1*x3 + p3*x4;
271249b5e25fSSatish Balay         pc[3] = m4 = p2*x3 + p4*x4;
271349b5e25fSSatish Balay         nz = bi[row+1] - diag_offset[row] - 1;
271449b5e25fSSatish Balay         pv += 4;
271549b5e25fSSatish Balay         for (j=0; j<nz; j++) {
271649b5e25fSSatish Balay           x1   = pv[0];  x2  = pv[1];   x3 = pv[2];  x4  = pv[3];
271749b5e25fSSatish Balay           x    = rtmp + 4*pj[j];
271849b5e25fSSatish Balay           x[0] -= m1*x1 + m3*x2;
271949b5e25fSSatish Balay           x[1] -= m2*x1 + m4*x2;
272049b5e25fSSatish Balay           x[2] -= m1*x3 + m3*x4;
272149b5e25fSSatish Balay           x[3] -= m2*x3 + m4*x4;
272249b5e25fSSatish Balay           pv   += 4;
272349b5e25fSSatish Balay         }
272449b5e25fSSatish Balay         PLogFlops(16*nz+12);
272549b5e25fSSatish Balay       }
272649b5e25fSSatish Balay       row = *ajtmp++;
272749b5e25fSSatish Balay     }
272849b5e25fSSatish Balay     /* finished row so stick it into b->a */
272949b5e25fSSatish Balay     pv = ba + 4*bi[i];
273049b5e25fSSatish Balay     pj = bj + bi[i];
273149b5e25fSSatish Balay     nz = bi[i+1] - bi[i];
273249b5e25fSSatish Balay     for (j=0; j<nz; j++) {
273349b5e25fSSatish Balay       x      = rtmp+4*pj[j];
273449b5e25fSSatish Balay       pv[0]  = x[0];  pv[1]  = x[1];  pv[2]  = x[2];  pv[3]  = x[3];
273549b5e25fSSatish Balay       pv   += 4;
273649b5e25fSSatish Balay     }
273749b5e25fSSatish Balay     /* invert diagonal block */
273849b5e25fSSatish Balay     w = ba + 4*diag_offset[i];
273949b5e25fSSatish Balay     ierr = Kernel_A_gets_inverse_A_2(w);CHKERRQ(ierr);
274049b5e25fSSatish Balay     /*Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work);*/
274149b5e25fSSatish Balay   }
274249b5e25fSSatish Balay 
274349b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
274449b5e25fSSatish Balay   C->factor    = FACTOR_LU;
274549b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
27465c0bcdfcSHong Zhang   C->preallocated = PETSC_TRUE;
274749b5e25fSSatish Balay   PLogFlops(1.3333*8*b->mbs); /* from inverting diagonal blocks */
274849b5e25fSSatish Balay   PetscFunctionReturn(0);
274949b5e25fSSatish Balay }
275049b5e25fSSatish Balay 
275149b5e25fSSatish Balay /*
27525c0bcdfcSHong Zhang     Numeric U^T*D*U factorization for SBAIJ format. Modified from SNF of YSMP.
275391602c66SHong Zhang     Version for blocks are 1 by 1.
275449b5e25fSSatish Balay */
275549b5e25fSSatish Balay #undef __FUNC__
27566f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_1"
27576f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_1(Mat A,Mat *B)
275849b5e25fSSatish Balay {
275949b5e25fSSatish Balay   Mat                C = *B;
276049b5e25fSSatish Balay   Mat_SeqSBAIJ       *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data;
276149b5e25fSSatish Balay   IS                 ip = b->row;
2762351d0355SHong Zhang   int                *rip,ierr,i,j,mbs = a->mbs,*bi = b->i,*bj = b->j;
2763cb718733SHong Zhang   int                *ai,*aj,*r;
2764066653e3SSatish Balay   MatScalar          *rtmp;
27652d007305SHong Zhang   MatScalar          *ba = b->a,*aa,ak;
276649b5e25fSSatish Balay   MatScalar          dk,uikdi;
2767cc0c071aSHong Zhang   int                k,jmin,jmax,*jl,*il,vj,nexti,ili;
276849b5e25fSSatish Balay 
276949b5e25fSSatish Balay   PetscFunctionBegin;
277049b5e25fSSatish Balay   ierr  = ISGetIndices(ip,&rip);CHKERRQ(ierr);
2771cb718733SHong Zhang   if (!a->permute){
27722d007305SHong Zhang     ai = a->i; aj = a->j; aa = a->a;
27732d007305SHong Zhang   } else {
27742d007305SHong Zhang     ai = a->inew; aj = a->jnew;
27752d007305SHong Zhang     aa = (MatScalar*)PetscMalloc(ai[mbs]*sizeof(MatScalar));CHKPTRQ(aa);
2776cb718733SHong Zhang     ierr = PetscMemcpy(aa,a->a,ai[mbs]*sizeof(MatScalar));CHKERRQ(ierr);
27772d007305SHong Zhang     r   = (int*)PetscMalloc(ai[mbs]*sizeof(int));CHKPTRQ(r);
27782d007305SHong Zhang     ierr= PetscMemcpy(r,a->a2anew,(ai[mbs])*sizeof(int));CHKERRQ(ierr);
27792d007305SHong Zhang 
27802d007305SHong Zhang     jmin = ai[0]; jmax = ai[mbs];
27812d007305SHong Zhang     for (j=jmin; j<jmax; j++){
2782cb718733SHong Zhang       while (r[j] != j){
27832d007305SHong Zhang         k = r[j]; r[j] = r[k]; r[k] = k;
27842d007305SHong Zhang         ak = aa[k]; aa[k] = aa[j]; aa[j] = ak;
27852d007305SHong Zhang       }
27862d007305SHong Zhang     }
27872d007305SHong Zhang     ierr = PetscFree(r);CHKERRA(ierr);
27882d007305SHong Zhang   }
27892d007305SHong Zhang 
279091602c66SHong Zhang   /* initialization */
279149b5e25fSSatish Balay   /* il and jl record the first nonzero element in each row of the accessing
279249b5e25fSSatish Balay      window U(0:k, k:mbs-1).
279349b5e25fSSatish Balay      jl:    list of rows to be added to uneliminated rows
279449b5e25fSSatish Balay             i>= k: jl(i) is the first row to be added to row i
279549b5e25fSSatish Balay             i<  k: jl(i) is the row following row i in some list of rows
279649b5e25fSSatish Balay             jl(i) = mbs indicates the end of a list
279749b5e25fSSatish Balay      il(i): points to the first nonzero element in columns k,...,mbs-1 of
279849b5e25fSSatish Balay             row i of U */
279949b5e25fSSatish Balay   rtmp  = (MatScalar*)PetscMalloc(mbs*sizeof(MatScalar));CHKPTRQ(rtmp);
280049b5e25fSSatish Balay   il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il);
280149b5e25fSSatish Balay   jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl);
280249b5e25fSSatish Balay   for (i=0; i<mbs; i++) {
280349b5e25fSSatish Balay     rtmp[i] = 0.0; jl[i] = mbs; il[0] = 0;
280449b5e25fSSatish Balay   }
280549b5e25fSSatish Balay 
280691602c66SHong Zhang   /* for each row k */
280749b5e25fSSatish Balay   for (k = 0; k<mbs; k++){
280849b5e25fSSatish Balay 
280991602c66SHong Zhang     /*initialize k-th row with elements nonzero in row perm(k) of A */
281049b5e25fSSatish Balay     jmin = ai[rip[k]]; jmax = ai[rip[k]+1];
281149b5e25fSSatish Balay     if (jmin < jmax) {
281249b5e25fSSatish Balay       for (j = jmin; j < jmax; j++){
2813351d0355SHong Zhang         vj = rip[aj[j]];
2814cc0c071aSHong Zhang         /* if (k <= vj)*/ rtmp[vj] = aa[j];
281549b5e25fSSatish Balay       }
281649b5e25fSSatish Balay     }
281749b5e25fSSatish Balay 
281891602c66SHong Zhang     /* modify k-th row by adding in those rows i with U(i,k) != 0 */
281949b5e25fSSatish Balay     dk = rtmp[k];
282049b5e25fSSatish Balay     i = jl[k]; /* first row to be added to k_th row  */
282149b5e25fSSatish Balay     /* printf(" k=%d, pivot row = %d\n",k,i); */
282249b5e25fSSatish Balay 
282349b5e25fSSatish Balay     while (i < mbs){
282449b5e25fSSatish Balay       nexti = jl[i]; /* next row to be added to k_th row */
282549b5e25fSSatish Balay 
282691602c66SHong Zhang       /* compute multiplier, update D(k) and U(i,k) */
282749b5e25fSSatish Balay       ili = il[i];  /* index of first nonzero element in U(i,k:bms-1) */
282849b5e25fSSatish Balay       uikdi = - ba[ili]*ba[i];
282949b5e25fSSatish Balay       dk += uikdi*ba[ili];
2830658e7b3eSHong Zhang       ba[ili] = uikdi; /* -U(i,k) */
283149b5e25fSSatish Balay 
283291602c66SHong Zhang       /* add multiple of row i to k-th row ... */
283349b5e25fSSatish Balay       jmin = ili + 1; jmax = bi[i+1];
283449b5e25fSSatish Balay       if (jmin < jmax){
283549b5e25fSSatish Balay         for (j=jmin; j<jmax; j++) rtmp[bj[j]] += uikdi*ba[j];
283691602c66SHong Zhang         /* ... add i to row list for next nonzero entry */
283749b5e25fSSatish Balay         il[i] = jmin;             /* update il(i) in column k+1, ... mbs-1 */
283849b5e25fSSatish Balay         j     = bj[jmin];
283949b5e25fSSatish Balay         jl[i] = jl[j]; jl[j] = i; /* update jl */
284049b5e25fSSatish Balay       }
28418be8c0c7SHong Zhang       i = nexti; /* printf("                  pivot row i=%d\n",i);  */
284249b5e25fSSatish Balay     }
284349b5e25fSSatish Balay 
284491602c66SHong Zhang     /* check for zero pivot and save diagoanl element */
284549b5e25fSSatish Balay     if (dk == 0.0){
284629bbc08cSBarry Smith       SETERRQ(PETSC_ERR_MAT_LU_ZRPVT,"Zero pivot");
28478be8c0c7SHong Zhang     }else if (PetscRealPart(dk) < 0){
28488be8c0c7SHong Zhang       ierr = PetscPrintf(PETSC_COMM_SELF,"Negative pivot: d[%d] = %g\n",k,dk);
284949b5e25fSSatish Balay     }
285049b5e25fSSatish Balay 
285191602c66SHong Zhang     /* save nonzero entries in k-th row of U ... */
2852f3dd7b2dSKris Buschelman     ba[k] = 1.0/dk;
285349b5e25fSSatish Balay     jmin = bi[k]; jmax = bi[k+1];
285449b5e25fSSatish Balay     if (jmin < jmax) {
285549b5e25fSSatish Balay       for (j=jmin; j<jmax; j++){
2856cc0c071aSHong Zhang          vj = bj[j]; ba[j] = rtmp[vj]; rtmp[vj] = 0.0;
285749b5e25fSSatish Balay       }
285891602c66SHong Zhang       /* ... add k to row list for first nonzero entry in k-th row */
285949b5e25fSSatish Balay       il[k] = jmin;
286049b5e25fSSatish Balay       i     = bj[jmin];
286149b5e25fSSatish Balay       jl[k] = jl[i]; jl[i] = k;
286249b5e25fSSatish Balay     }
286349b5e25fSSatish Balay   }
286449b5e25fSSatish Balay 
286549b5e25fSSatish Balay   ierr = PetscFree(rtmp);CHKERRQ(ierr);
286649b5e25fSSatish Balay   ierr = PetscFree(il);CHKERRQ(ierr);
286749b5e25fSSatish Balay   ierr = PetscFree(jl);CHKERRQ(ierr);
2868cb718733SHong Zhang   if (a->permute){
2869cb718733SHong Zhang     ierr = PetscFree(aa);CHKERRQ(ierr);
2870cb718733SHong Zhang   }
287149b5e25fSSatish Balay 
287249b5e25fSSatish Balay   ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr);
28738be8c0c7SHong Zhang   C->factor    = FACTOR_CHOLESKY;
287449b5e25fSSatish Balay   C->assembled = PETSC_TRUE;
28755c0bcdfcSHong Zhang   C->preallocated = PETSC_TRUE;
287649b5e25fSSatish Balay   PLogFlops(b->mbs);
28775c0bcdfcSHong Zhang #ifdef TEMP
28785c0bcdfcSHong Zhang   printf("in factnum_1\n");
28795c0bcdfcSHong Zhang   for (k=0; k<mbs; k++){
28805c0bcdfcSHong Zhang     i = b->i[k+1] - b->i[k];
28815c0bcdfcSHong Zhang     printf("\n b->i[%d]: %d, nzk: %d, diag: %g\n",k,b->i[k],i,b->a[k]);
28825c0bcdfcSHong Zhang     jmin = b->i[k]; jmax = b->i[k+1];
28835c0bcdfcSHong Zhang     for (j=jmin; j<jmax; j++){
28845c0bcdfcSHong Zhang       printf(" %d %g, ",b->j[j],b->a[j]);
28855c0bcdfcSHong Zhang     }
28865c0bcdfcSHong Zhang   }
28875c0bcdfcSHong Zhang #endif
288849b5e25fSSatish Balay   PetscFunctionReturn(0);
288949b5e25fSSatish Balay }
289049b5e25fSSatish Balay 
289149b5e25fSSatish Balay #undef __FUNC__
28926f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactor_SeqSBAIJ"
2893b8b23757SHong Zhang int MatCholeskyFactor_SeqSBAIJ(Mat A,IS perm,PetscReal f)
289449b5e25fSSatish Balay {
28954445ddedSHong Zhang   int ierr;
289649b5e25fSSatish Balay   Mat C;
289749b5e25fSSatish Balay 
289849b5e25fSSatish Balay   PetscFunctionBegin;
2899b8b23757SHong Zhang   ierr = MatCholeskyFactorSymbolic(A,perm,f,&C);CHKERRQ(ierr);
2900a4ada70bSHong Zhang   ierr = MatCholeskyFactorNumeric(A,&C);CHKERRQ(ierr);
29014445ddedSHong Zhang   ierr = MatHeaderCopy(A,C);CHKERRQ(ierr);
290249b5e25fSSatish Balay   PetscFunctionReturn(0);
290349b5e25fSSatish Balay }
290449b5e25fSSatish Balay 
290549b5e25fSSatish Balay 
2906