149b5e25fSSatish Balay /* Using Modified Sparse Row (MSR) storage. 249b5e25fSSatish Balay See page 85, "Iterative Methods ..." by Saad. */ 349b5e25fSSatish Balay 4*b8b23757SHong Zhang /*$Id: sbaijfact.c,v 1.6 2000/07/25 13:40:46 hzhang Exp hzhang $*/ 549b5e25fSSatish Balay /* 649b5e25fSSatish Balay Factorization code for SBAIJ format. 749b5e25fSSatish Balay */ 849b5e25fSSatish Balay #include "sbaij.h" 949b5e25fSSatish Balay #include "src/mat/impls/baij/seq/baij.h" 1049b5e25fSSatish Balay #include "src/vec/vecimpl.h" 1149b5e25fSSatish Balay #include "src/inline/ilu.h" 1249b5e25fSSatish Balay 1349b5e25fSSatish Balay #undef __FUNC__ 146f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorSymbolic_SeqSBAIJ" 156f9a564bSHong Zhang int MatCholeskyFactorSymbolic_SeqSBAIJ(Mat A,IS iscol,MatLUInfo *info,Mat *B) 1649b5e25fSSatish Balay { 1749b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b; 18a4ada70bSHong Zhang IS isicol,isrow; 1949b5e25fSSatish Balay int *rip,*riip,ierr,i,mbs = a->mbs,*ai = a->i,*aj = a->j; 20066653e3SSatish Balay int *jutmp,bs = a->bs,bs2=a->bs2; 21066653e3SSatish Balay int m,nzi,realloc = 0; 22066653e3SSatish Balay int *jl,*q,jumin,jmin,jmax,juptr,nzk,qm,*iu,*ju,k,j,vj,umax,maxadd; 2349b5e25fSSatish Balay PetscReal f = 1.0; 2449b5e25fSSatish Balay 2549b5e25fSSatish Balay PetscFunctionBegin; 266f9a564bSHong Zhang isrow = iscol; /* remove isrow later! */ 2749b5e25fSSatish Balay PetscValidHeaderSpecific(isrow,IS_COOKIE); 2849b5e25fSSatish Balay PetscValidHeaderSpecific(iscol,IS_COOKIE); 2949b5e25fSSatish Balay /* if (A->M != A->N) SETERRQ(PETSC_ERR_ARG_WRONG,0,"matrix must be square");*/ 3049b5e25fSSatish Balay ierr = ISInvertPermutation(iscol,PETSC_DECIDE,&isicol);CHKERRQ(ierr); 3149b5e25fSSatish Balay ierr = ISGetIndices(isrow,&rip);CHKERRQ(ierr); 3249b5e25fSSatish Balay ierr = ISGetIndices(isicol,&riip);CHKERRQ(ierr); 336f9a564bSHong Zhang 3449b5e25fSSatish Balay for (k=0; k<mbs; k++) { 3549b5e25fSSatish Balay if ( rip[k] - riip[k] != 0 ) { 3649b5e25fSSatish Balay printf("Non-symm. permutation, use symm. permutation or general matrix format\n"); 3749b5e25fSSatish Balay break; 3849b5e25fSSatish Balay } 3949b5e25fSSatish Balay } 4049b5e25fSSatish Balay 4149b5e25fSSatish Balay /* initialization */ 4249b5e25fSSatish Balay /* Don't know how many column pointers are needed so estimate. 4349b5e25fSSatish Balay Use Modified Sparse Row storage for u and ju, see Sasd pp.85 */ 4449b5e25fSSatish Balay if (info) f = info->fill; 4549b5e25fSSatish Balay umax = (int)(f*ai[mbs] + 1); umax += mbs + 1; 4649b5e25fSSatish Balay ju = iu = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(ju); 4749b5e25fSSatish Balay iu[0] = mbs+1; 4849b5e25fSSatish Balay juptr = mbs; 4949b5e25fSSatish Balay jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 5049b5e25fSSatish Balay q = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(q); 5149b5e25fSSatish Balay for (i=0; i<mbs; i++){ 5249b5e25fSSatish Balay jl[i] = mbs; q[i] = 0; 5349b5e25fSSatish Balay } 5449b5e25fSSatish Balay 5549b5e25fSSatish Balay /* for each row k */ 5649b5e25fSSatish Balay for (k=0; k<mbs; k++){ 5749b5e25fSSatish Balay nzk = 0; /* num. of nz blocks in k-th block row with diagonal block excluded */ 5849b5e25fSSatish Balay q[k] = mbs; 5949b5e25fSSatish Balay /* initialize nonzero structure of k-th row to row rip[k] of A */ 6049b5e25fSSatish Balay jmin = ai[rip[k]]; 6149b5e25fSSatish Balay jmax = ai[rip[k]+1]; 6249b5e25fSSatish Balay for (j=jmin; j<jmax; j++){ 6349b5e25fSSatish Balay vj = riip[aj[j]]; /* col. value */ 6449b5e25fSSatish Balay if(vj > k){ 6549b5e25fSSatish Balay qm = k; 6649b5e25fSSatish Balay do { 6749b5e25fSSatish Balay m = qm; qm = q[m]; 6849b5e25fSSatish Balay } while(qm < vj); 6949b5e25fSSatish Balay if (qm == vj) { 7049b5e25fSSatish Balay printf(" error: duplicate entry in A\n"); break; 7149b5e25fSSatish Balay } 7249b5e25fSSatish Balay nzk++; 7349b5e25fSSatish Balay q[m] = vj; 7449b5e25fSSatish Balay q[vj] = qm; 7549b5e25fSSatish Balay } /* if(vj > k) */ 7649b5e25fSSatish Balay } /* for (j=jmin; j<jmax; j++) */ 7749b5e25fSSatish Balay 7849b5e25fSSatish Balay /* modify nonzero structure of k-th row by computing fill-in 7949b5e25fSSatish Balay for each row i to be merged in */ 8049b5e25fSSatish Balay i = k; 8149b5e25fSSatish Balay i = jl[i]; /* next pivot row (== mbs for symbolic factorization) */ 8249b5e25fSSatish Balay /* printf(" next pivot row i=%d\n",i); */ 8349b5e25fSSatish Balay while (i < mbs){ 8449b5e25fSSatish Balay /* merge row i into k-th row */ 8549b5e25fSSatish Balay nzi = iu[i+1] - (iu[i]+1); 8649b5e25fSSatish Balay jmin = iu[i] + 1; jmax = iu[i] + nzi; 8749b5e25fSSatish Balay qm = k; 8849b5e25fSSatish Balay for (j=jmin; j<jmax+1; j++){ 8949b5e25fSSatish Balay vj = ju[j]; 9049b5e25fSSatish Balay do { 9149b5e25fSSatish Balay m = qm; qm = q[m]; 9249b5e25fSSatish Balay } while (qm < vj); 9349b5e25fSSatish Balay if (qm != vj){ 9449b5e25fSSatish Balay nzk++; q[m] = vj; q[vj] = qm; qm = vj; 9549b5e25fSSatish Balay } 9649b5e25fSSatish Balay } 9749b5e25fSSatish Balay i = jl[i]; /* next pivot row */ 9849b5e25fSSatish Balay } 9949b5e25fSSatish Balay 10049b5e25fSSatish Balay /* add k to row list for first nonzero element in k-th row */ 10149b5e25fSSatish Balay if (nzk > 0){ 10249b5e25fSSatish Balay i = q[k]; /* col value of first nonzero element in U(k, k+1:mbs-1) */ 10349b5e25fSSatish Balay jl[k] = jl[i]; jl[i] = k; 10449b5e25fSSatish Balay } 10549b5e25fSSatish Balay iu[k+1] = iu[k] + nzk; /* printf(" iu[%d]=%d, umax=%d\n", k+1, iu[k+1],umax);*/ 10649b5e25fSSatish Balay 10749b5e25fSSatish Balay /* allocate more space to ju if needed */ 10849b5e25fSSatish Balay if (iu[k+1] > umax) { printf("allocate more space, iu[%d]=%d > umax=%d\n",k+1, iu[k+1],umax); 10949b5e25fSSatish Balay /* estimate how much additional space we will need */ 11049b5e25fSSatish Balay /* use the strategy suggested by David Hysom <hysom@perch-t.icase.edu> */ 11149b5e25fSSatish Balay /* just double the memory each time */ 11249b5e25fSSatish Balay maxadd = umax; 11349b5e25fSSatish Balay if (maxadd < nzk) maxadd = (mbs-k)*(nzk+1)/2; 11449b5e25fSSatish Balay umax += maxadd; 11549b5e25fSSatish Balay 11649b5e25fSSatish Balay /* allocate a longer ju (NOTE: iu poits to the beginning of ju) */ 11749b5e25fSSatish Balay jutmp = (int*)PetscMalloc(umax*sizeof(int));CHKPTRQ(jutmp); 11849b5e25fSSatish Balay ierr = PetscMemcpy(jutmp,ju,iu[k]*sizeof(int));CHKERRQ(ierr); 11949b5e25fSSatish Balay ierr = PetscFree(ju);CHKERRQ(ierr); 12049b5e25fSSatish Balay ju = iu = jutmp; 12149b5e25fSSatish Balay realloc++; /* count how many times we realloc */ 12249b5e25fSSatish Balay } 12349b5e25fSSatish Balay 12449b5e25fSSatish Balay /* save nonzero structure of k-th row in ju */ 12549b5e25fSSatish Balay i=k; 12649b5e25fSSatish Balay jumin = juptr + 1; juptr += nzk; 12749b5e25fSSatish Balay for (j=jumin; j<juptr+1; j++){ 12849b5e25fSSatish Balay i=q[i]; 12949b5e25fSSatish Balay ju[j]=i; 13049b5e25fSSatish Balay /* printf(" k=%d, ju[%d]=%d\n",k,j,ju[j]);*/ 13149b5e25fSSatish Balay } 13249b5e25fSSatish Balay /* printf("\n"); */ 13349b5e25fSSatish Balay } /* for (k=0; k<mbs; k++) */ 13449b5e25fSSatish Balay 13549b5e25fSSatish Balay if (ai[mbs] != 0) { 13649b5e25fSSatish Balay PetscReal af = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]); 1376f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Reallocs %d Fill ratio:given %g needed %g\n",realloc,f,af); 1386f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Run with -pc_lu_fill %g or use \n",af); 1396f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:PCLUSetFill(pc,%g);\n",af); 1406f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:for best performance.\n"); 14149b5e25fSSatish Balay } else { 1426f9a564bSHong Zhang PLogInfo(A,"MatCholeskyFactorSymbolic_SeqSBAIJ:Empty matrix.\n"); 14349b5e25fSSatish Balay } 14449b5e25fSSatish Balay 14549b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&rip);CHKERRQ(ierr); 14649b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&riip);CHKERRQ(ierr); 14749b5e25fSSatish Balay 14849b5e25fSSatish Balay ierr = PetscFree(q);CHKERRQ(ierr); 14949b5e25fSSatish Balay ierr = PetscFree(jl);CHKERRQ(ierr); 15049b5e25fSSatish Balay 15149b5e25fSSatish Balay /* put together the new matrix */ 15249b5e25fSSatish Balay ierr = MatCreateSeqSBAIJ(A->comm,bs,bs*mbs,bs*mbs,0,PETSC_NULL,B);CHKERRQ(ierr); 15349b5e25fSSatish Balay PLogObjectParent(*B,isicol); 15449b5e25fSSatish Balay b = (Mat_SeqSBAIJ*)(*B)->data; 15549b5e25fSSatish Balay ierr = PetscFree(b->imax);CHKERRQ(ierr); 15649b5e25fSSatish Balay b->singlemalloc = PETSC_FALSE; 15749b5e25fSSatish Balay /* the next line frees the default space generated by the Create() */ 15849b5e25fSSatish Balay ierr = PetscFree(b->a);CHKERRQ(ierr); 15949b5e25fSSatish Balay ierr = PetscFree(b->ilen);CHKERRQ(ierr); 16049b5e25fSSatish Balay b->a = (MatScalar*)PetscMalloc((iu[mbs]+1)*sizeof(MatScalar)*bs2);CHKPTRQ(b->a); 16149b5e25fSSatish Balay b->j = ju; 16249b5e25fSSatish Balay b->i = iu; 16349b5e25fSSatish Balay b->diag = 0; 16449b5e25fSSatish Balay b->ilen = 0; 16549b5e25fSSatish Balay b->imax = 0; 16649b5e25fSSatish Balay b->row = isrow; 16749b5e25fSSatish Balay b->col = iscol; 16849b5e25fSSatish Balay ierr = PetscObjectReference((PetscObject)isrow);CHKERRQ(ierr); 16949b5e25fSSatish Balay ierr = PetscObjectReference((PetscObject)iscol);CHKERRQ(ierr); 17049b5e25fSSatish Balay b->icol = isicol; 17149b5e25fSSatish Balay b->solve_work = (Scalar*)PetscMalloc((bs*mbs+bs)*sizeof(Scalar));CHKPTRQ(b->solve_work); 17249b5e25fSSatish Balay /* In b structure: Free imax, ilen, old a, old j. 17349b5e25fSSatish Balay Allocate idnew, solve_work, new a, new j */ 17449b5e25fSSatish Balay PLogObjectMemory(*B,(iu[mbs]-mbs)*(sizeof(int)+sizeof(MatScalar))); 17549b5e25fSSatish Balay b->s_maxnz = b->s_nz = iu[mbs]; 17649b5e25fSSatish Balay 17749b5e25fSSatish Balay (*B)->factor = FACTOR_LU; 17849b5e25fSSatish Balay (*B)->info.factor_mallocs = realloc; 17949b5e25fSSatish Balay (*B)->info.fill_ratio_given = f; 18049b5e25fSSatish Balay if (ai[mbs] != 0) { 18149b5e25fSSatish Balay (*B)->info.fill_ratio_needed = ((PetscReal)iu[mbs])/((PetscReal)ai[mbs]); 18249b5e25fSSatish Balay } else { 18349b5e25fSSatish Balay (*B)->info.fill_ratio_needed = 0.0; 18449b5e25fSSatish Balay } 18549b5e25fSSatish Balay 18649b5e25fSSatish Balay 18749b5e25fSSatish Balay PetscFunctionReturn(0); 18849b5e25fSSatish Balay } 18949b5e25fSSatish Balay 19049b5e25fSSatish Balay /* ----------------------------------------------------------- */ 19149b5e25fSSatish Balay #undef __FUNC__ 1926f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_N" 1936f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_N(Mat A,Mat *B) 19449b5e25fSSatish Balay { 19549b5e25fSSatish Balay Mat C = *B; 19649b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 19749b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 19849b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 19949b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row,bslog,*ai=a->i,*aj=a->j,k,flg; 20049b5e25fSSatish Balay int *diag_offset=b->diag,diag,bs=a->bs,bs2 = a->bs2,*v_pivots,*pj; 20149b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a,*pv,*v,*rtmp,*multiplier,*v_work,*pc,*w; 20249b5e25fSSatish Balay 20349b5e25fSSatish Balay PetscFunctionBegin; 20449b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 20549b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 20649b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(bs2*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 20749b5e25fSSatish Balay ierr = PetscMemzero(rtmp,bs2*(n+1)*sizeof(MatScalar));CHKERRQ(ierr); 20849b5e25fSSatish Balay /* generate work space needed by dense LU factorization */ 20949b5e25fSSatish Balay v_work = (MatScalar*)PetscMalloc(bs*sizeof(int) + (bs+bs2)*sizeof(MatScalar));CHKPTRQ(v_work); 21049b5e25fSSatish Balay multiplier = v_work + bs; 21149b5e25fSSatish Balay v_pivots = (int*)(multiplier + bs2); 21249b5e25fSSatish Balay 21349b5e25fSSatish Balay /* flops in while loop */ 21449b5e25fSSatish Balay bslog = 2*bs*bs2; 21549b5e25fSSatish Balay 21649b5e25fSSatish Balay for (i=0; i<n; i++) { 21749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 21849b5e25fSSatish Balay ajtmp = bj + bi[i]; 21949b5e25fSSatish Balay for (j=0; j<nz; j++) { 22049b5e25fSSatish Balay ierr = PetscMemzero(rtmp+bs2*ajtmp[j],bs2*sizeof(MatScalar));CHKERRQ(ierr); 22149b5e25fSSatish Balay } 22249b5e25fSSatish Balay /* load in initial (unfactored row) */ 22349b5e25fSSatish Balay nz = ai[r[i]+1] - ai[r[i]]; 22449b5e25fSSatish Balay ajtmpold = aj + ai[r[i]]; 22549b5e25fSSatish Balay v = aa + bs2*ai[r[i]]; 22649b5e25fSSatish Balay for (j=0; j<nz; j++) { 22749b5e25fSSatish Balay ierr = PetscMemcpy(rtmp+bs2*ic[ajtmpold[j]],v+bs2*j,bs2*sizeof(MatScalar));CHKERRQ(ierr); 22849b5e25fSSatish Balay } 22949b5e25fSSatish Balay row = *ajtmp++; 23049b5e25fSSatish Balay while (row < i) { 23149b5e25fSSatish Balay pc = rtmp + bs2*row; 23249b5e25fSSatish Balay /* if (*pc) { */ 23349b5e25fSSatish Balay for (flg=0,k=0; k<bs2; k++) { if (pc[k]!=0.0) { flg =1; break; }} 23449b5e25fSSatish Balay if (flg) { 23549b5e25fSSatish Balay pv = ba + bs2*diag_offset[row]; 23649b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 23749b5e25fSSatish Balay Kernel_A_gets_A_times_B(bs,pc,pv,multiplier); 23849b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 23949b5e25fSSatish Balay pv += bs2; 24049b5e25fSSatish Balay for (j=0; j<nz; j++) { 24149b5e25fSSatish Balay Kernel_A_gets_A_minus_B_times_C(bs,rtmp+bs2*pj[j],pc,pv+bs2*j); 24249b5e25fSSatish Balay } 24349b5e25fSSatish Balay PLogFlops(bslog*(nz+1)-bs); 24449b5e25fSSatish Balay } 24549b5e25fSSatish Balay row = *ajtmp++; 24649b5e25fSSatish Balay } 24749b5e25fSSatish Balay /* finished row so stick it into b->a */ 24849b5e25fSSatish Balay pv = ba + bs2*bi[i]; 24949b5e25fSSatish Balay pj = bj + bi[i]; 25049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 25149b5e25fSSatish Balay for (j=0; j<nz; j++) { 25249b5e25fSSatish Balay ierr = PetscMemcpy(pv+bs2*j,rtmp+bs2*pj[j],bs2*sizeof(MatScalar));CHKERRQ(ierr); 25349b5e25fSSatish Balay } 25449b5e25fSSatish Balay diag = diag_offset[i] - bi[i]; 25549b5e25fSSatish Balay /* invert diagonal block */ 25649b5e25fSSatish Balay w = pv + bs2*diag; 25749b5e25fSSatish Balay Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work); 25849b5e25fSSatish Balay } 25949b5e25fSSatish Balay 26049b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 26149b5e25fSSatish Balay ierr = PetscFree(v_work);CHKERRQ(ierr); 26249b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 26349b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 26449b5e25fSSatish Balay C->factor = FACTOR_LU; 26549b5e25fSSatish Balay C->assembled = PETSC_TRUE; 26649b5e25fSSatish Balay PLogFlops(1.3333*bs*bs2*b->mbs); /* from inverting diagonal blocks */ 26749b5e25fSSatish Balay PetscFunctionReturn(0); 26849b5e25fSSatish Balay } 26949b5e25fSSatish Balay /* ------------------------------------------------------------*/ 27049b5e25fSSatish Balay /* 27149b5e25fSSatish Balay Version for when blocks are 7 by 7 27249b5e25fSSatish Balay */ 27349b5e25fSSatish Balay #undef __FUNC__ 2746f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7" 2756f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7(Mat A,Mat *B) 27649b5e25fSSatish Balay { 27749b5e25fSSatish Balay Mat C = *B; 27849b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 27949b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 28049b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 28149b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 28249b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 28349b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 28449b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 28549b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 28649b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 28749b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 28849b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 28949b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 29049b5e25fSSatish Balay MatScalar p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49; 29149b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 29249b5e25fSSatish Balay MatScalar x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49; 29349b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 29449b5e25fSSatish Balay MatScalar m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49; 29549b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 29649b5e25fSSatish Balay 29749b5e25fSSatish Balay PetscFunctionBegin; 29849b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 29949b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 30049b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 30149b5e25fSSatish Balay 30249b5e25fSSatish Balay for (i=0; i<n; i++) { 30349b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 30449b5e25fSSatish Balay ajtmp = bj + bi[i]; 30549b5e25fSSatish Balay for (j=0; j<nz; j++) { 30649b5e25fSSatish Balay x = rtmp+49*ajtmp[j]; 30749b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 30849b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 30949b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 31049b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 31149b5e25fSSatish Balay x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ; 31249b5e25fSSatish Balay x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ; 31349b5e25fSSatish Balay } 31449b5e25fSSatish Balay /* load in initial (unfactored row) */ 31549b5e25fSSatish Balay idx = r[i]; 31649b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 31749b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 31849b5e25fSSatish Balay v = aa + 49*ai[idx]; 31949b5e25fSSatish Balay for (j=0; j<nz; j++) { 32049b5e25fSSatish Balay x = rtmp+49*ic[ajtmpold[j]]; 32149b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 32249b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 32349b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 32449b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 32549b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 32649b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 32749b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 32849b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 32949b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 33049b5e25fSSatish Balay x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39]; 33149b5e25fSSatish Balay x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43]; 33249b5e25fSSatish Balay x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47]; 33349b5e25fSSatish Balay x[48] = v[48]; 33449b5e25fSSatish Balay v += 49; 33549b5e25fSSatish Balay } 33649b5e25fSSatish Balay row = *ajtmp++; 33749b5e25fSSatish Balay while (row < i) { 33849b5e25fSSatish Balay pc = rtmp + 49*row; 33949b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 34049b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 34149b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 34249b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 34349b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 34449b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 34549b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 34649b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 34749b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 34849b5e25fSSatish Balay p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39]; 34949b5e25fSSatish Balay p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43]; 35049b5e25fSSatish Balay p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47]; 35149b5e25fSSatish Balay p49 = pc[48]; 35249b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 35349b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 35449b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 35549b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 35649b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 35749b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 35849b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 35949b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 36049b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 || 36149b5e25fSSatish Balay p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 || 36249b5e25fSSatish Balay p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 || 36349b5e25fSSatish Balay p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 || 36449b5e25fSSatish Balay p49 != 0.0) { 36549b5e25fSSatish Balay pv = ba + 49*diag_offset[row]; 36649b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 36749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 36849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 36949b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 37049b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 37149b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 37249b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 37349b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 37449b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 37549b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 37649b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 37749b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 37849b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 37949b5e25fSSatish Balay x49 = pv[48]; 38049b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p8*x2 + p15*x3 + p22*x4 + p29*x5 + p36*x6 + p43*x7; 38149b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p9*x2 + p16*x3 + p23*x4 + p30*x5 + p37*x6 + p44*x7; 38249b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p10*x2 + p17*x3 + p24*x4 + p31*x5 + p38*x6 + p45*x7; 38349b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p11*x2 + p18*x3 + p25*x4 + p32*x5 + p39*x6 + p46*x7; 38449b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p12*x2 + p19*x3 + p26*x4 + p33*x5 + p40*x6 + p47*x7; 38549b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p13*x2 + p20*x3 + p27*x4 + p34*x5 + p41*x6 + p48*x7; 38649b5e25fSSatish Balay pc[6] = m7 = p7*x1 + p14*x2 + p21*x3 + p28*x4 + p35*x5 + p42*x6 + p49*x7; 38749b5e25fSSatish Balay 38849b5e25fSSatish Balay pc[7] = m8 = p1*x8 + p8*x9 + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14; 38949b5e25fSSatish Balay pc[8] = m9 = p2*x8 + p9*x9 + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14; 39049b5e25fSSatish Balay pc[9] = m10 = p3*x8 + p10*x9 + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14; 39149b5e25fSSatish Balay pc[10] = m11 = p4*x8 + p11*x9 + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14; 39249b5e25fSSatish Balay pc[11] = m12 = p5*x8 + p12*x9 + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14; 39349b5e25fSSatish Balay pc[12] = m13 = p6*x8 + p13*x9 + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14; 39449b5e25fSSatish Balay pc[13] = m14 = p7*x8 + p14*x9 + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14; 39549b5e25fSSatish Balay 39649b5e25fSSatish Balay pc[14] = m15 = p1*x15 + p8*x16 + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21; 39749b5e25fSSatish Balay pc[15] = m16 = p2*x15 + p9*x16 + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21; 39849b5e25fSSatish Balay pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21; 39949b5e25fSSatish Balay pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21; 40049b5e25fSSatish Balay pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21; 40149b5e25fSSatish Balay pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21; 40249b5e25fSSatish Balay pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21; 40349b5e25fSSatish Balay 40449b5e25fSSatish Balay pc[21] = m22 = p1*x22 + p8*x23 + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28; 40549b5e25fSSatish Balay pc[22] = m23 = p2*x22 + p9*x23 + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28; 40649b5e25fSSatish Balay pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28; 40749b5e25fSSatish Balay pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28; 40849b5e25fSSatish Balay pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28; 40949b5e25fSSatish Balay pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28; 41049b5e25fSSatish Balay pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28; 41149b5e25fSSatish Balay 41249b5e25fSSatish Balay pc[28] = m29 = p1*x29 + p8*x30 + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35; 41349b5e25fSSatish Balay pc[29] = m30 = p2*x29 + p9*x30 + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35; 41449b5e25fSSatish Balay pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35; 41549b5e25fSSatish Balay pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35; 41649b5e25fSSatish Balay pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35; 41749b5e25fSSatish Balay pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35; 41849b5e25fSSatish Balay pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35; 41949b5e25fSSatish Balay 42049b5e25fSSatish Balay pc[35] = m36 = p1*x36 + p8*x37 + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42; 42149b5e25fSSatish Balay pc[36] = m37 = p2*x36 + p9*x37 + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42; 42249b5e25fSSatish Balay pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42; 42349b5e25fSSatish Balay pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42; 42449b5e25fSSatish Balay pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42; 42549b5e25fSSatish Balay pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42; 42649b5e25fSSatish Balay pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42; 42749b5e25fSSatish Balay 42849b5e25fSSatish Balay pc[42] = m43 = p1*x43 + p8*x44 + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49; 42949b5e25fSSatish Balay pc[43] = m44 = p2*x43 + p9*x44 + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49; 43049b5e25fSSatish Balay pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49; 43149b5e25fSSatish Balay pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49; 43249b5e25fSSatish Balay pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49; 43349b5e25fSSatish Balay pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49; 43449b5e25fSSatish Balay pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49; 43549b5e25fSSatish Balay 43649b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 43749b5e25fSSatish Balay pv += 49; 43849b5e25fSSatish Balay for (j=0; j<nz; j++) { 43949b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 44049b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 44149b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 44249b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 44349b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 44449b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 44549b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 44649b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 44749b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 44849b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 44949b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 45049b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 45149b5e25fSSatish Balay x49 = pv[48]; 45249b5e25fSSatish Balay x = rtmp + 49*pj[j]; 45349b5e25fSSatish Balay x[0] -= m1*x1 + m8*x2 + m15*x3 + m22*x4 + m29*x5 + m36*x6 + m43*x7; 45449b5e25fSSatish Balay x[1] -= m2*x1 + m9*x2 + m16*x3 + m23*x4 + m30*x5 + m37*x6 + m44*x7; 45549b5e25fSSatish Balay x[2] -= m3*x1 + m10*x2 + m17*x3 + m24*x4 + m31*x5 + m38*x6 + m45*x7; 45649b5e25fSSatish Balay x[3] -= m4*x1 + m11*x2 + m18*x3 + m25*x4 + m32*x5 + m39*x6 + m46*x7; 45749b5e25fSSatish Balay x[4] -= m5*x1 + m12*x2 + m19*x3 + m26*x4 + m33*x5 + m40*x6 + m47*x7; 45849b5e25fSSatish Balay x[5] -= m6*x1 + m13*x2 + m20*x3 + m27*x4 + m34*x5 + m41*x6 + m48*x7; 45949b5e25fSSatish Balay x[6] -= m7*x1 + m14*x2 + m21*x3 + m28*x4 + m35*x5 + m42*x6 + m49*x7; 46049b5e25fSSatish Balay 46149b5e25fSSatish Balay x[7] -= m1*x8 + m8*x9 + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14; 46249b5e25fSSatish Balay x[8] -= m2*x8 + m9*x9 + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14; 46349b5e25fSSatish Balay x[9] -= m3*x8 + m10*x9 + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14; 46449b5e25fSSatish Balay x[10] -= m4*x8 + m11*x9 + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14; 46549b5e25fSSatish Balay x[11] -= m5*x8 + m12*x9 + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14; 46649b5e25fSSatish Balay x[12] -= m6*x8 + m13*x9 + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14; 46749b5e25fSSatish Balay x[13] -= m7*x8 + m14*x9 + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14; 46849b5e25fSSatish Balay 46949b5e25fSSatish Balay x[14] -= m1*x15 + m8*x16 + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21; 47049b5e25fSSatish Balay x[15] -= m2*x15 + m9*x16 + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21; 47149b5e25fSSatish Balay x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21; 47249b5e25fSSatish Balay x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21; 47349b5e25fSSatish Balay x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21; 47449b5e25fSSatish Balay x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21; 47549b5e25fSSatish Balay x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21; 47649b5e25fSSatish Balay 47749b5e25fSSatish Balay x[21] -= m1*x22 + m8*x23 + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28; 47849b5e25fSSatish Balay x[22] -= m2*x22 + m9*x23 + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28; 47949b5e25fSSatish Balay x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28; 48049b5e25fSSatish Balay x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28; 48149b5e25fSSatish Balay x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28; 48249b5e25fSSatish Balay x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28; 48349b5e25fSSatish Balay x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28; 48449b5e25fSSatish Balay 48549b5e25fSSatish Balay x[28] -= m1*x29 + m8*x30 + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35; 48649b5e25fSSatish Balay x[29] -= m2*x29 + m9*x30 + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35; 48749b5e25fSSatish Balay x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35; 48849b5e25fSSatish Balay x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35; 48949b5e25fSSatish Balay x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35; 49049b5e25fSSatish Balay x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35; 49149b5e25fSSatish Balay x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35; 49249b5e25fSSatish Balay 49349b5e25fSSatish Balay x[35] -= m1*x36 + m8*x37 + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42; 49449b5e25fSSatish Balay x[36] -= m2*x36 + m9*x37 + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42; 49549b5e25fSSatish Balay x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42; 49649b5e25fSSatish Balay x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42; 49749b5e25fSSatish Balay x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42; 49849b5e25fSSatish Balay x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42; 49949b5e25fSSatish Balay x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42; 50049b5e25fSSatish Balay 50149b5e25fSSatish Balay x[42] -= m1*x43 + m8*x44 + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49; 50249b5e25fSSatish Balay x[43] -= m2*x43 + m9*x44 + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49; 50349b5e25fSSatish Balay x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49; 50449b5e25fSSatish Balay x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49; 50549b5e25fSSatish Balay x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49; 50649b5e25fSSatish Balay x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49; 50749b5e25fSSatish Balay x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49; 50849b5e25fSSatish Balay pv += 49; 50949b5e25fSSatish Balay } 51049b5e25fSSatish Balay PLogFlops(686*nz+637); 51149b5e25fSSatish Balay } 51249b5e25fSSatish Balay row = *ajtmp++; 51349b5e25fSSatish Balay } 51449b5e25fSSatish Balay /* finished row so stick it into b->a */ 51549b5e25fSSatish Balay pv = ba + 49*bi[i]; 51649b5e25fSSatish Balay pj = bj + bi[i]; 51749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 51849b5e25fSSatish Balay for (j=0; j<nz; j++) { 51949b5e25fSSatish Balay x = rtmp+49*pj[j]; 52049b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 52149b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 52249b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 52349b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 52449b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 52549b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 52649b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 52749b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 52849b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 52949b5e25fSSatish Balay pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39]; 53049b5e25fSSatish Balay pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43]; 53149b5e25fSSatish Balay pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47]; 53249b5e25fSSatish Balay pv[48] = x[48]; 53349b5e25fSSatish Balay pv += 49; 53449b5e25fSSatish Balay } 53549b5e25fSSatish Balay /* invert diagonal block */ 53649b5e25fSSatish Balay w = ba + 49*diag_offset[i]; 53749b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr); 53849b5e25fSSatish Balay } 53949b5e25fSSatish Balay 54049b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 54149b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 54249b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 54349b5e25fSSatish Balay C->factor = FACTOR_LU; 54449b5e25fSSatish Balay C->assembled = PETSC_TRUE; 54549b5e25fSSatish Balay PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */ 54649b5e25fSSatish Balay PetscFunctionReturn(0); 54749b5e25fSSatish Balay } 54849b5e25fSSatish Balay 54949b5e25fSSatish Balay /* 55049b5e25fSSatish Balay Version for when blocks are 7 by 7 Using natural ordering 55149b5e25fSSatish Balay */ 55249b5e25fSSatish Balay #undef __FUNC__ 5536f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering" 5546f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_7_NaturalOrdering(Mat A,Mat *B) 55549b5e25fSSatish Balay { 55649b5e25fSSatish Balay Mat C = *B; 55749b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 55849b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 55949b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 56049b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 56149b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 56249b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 56349b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 56449b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 56549b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 56649b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 56749b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 56849b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 56949b5e25fSSatish Balay MatScalar p37,p38,p39,p40,p41,p42,p43,p44,p45,p46,p47,p48,p49; 57049b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 57149b5e25fSSatish Balay MatScalar x37,x38,x39,x40,x41,x42,x43,x44,x45,x46,x47,x48,x49; 57249b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 57349b5e25fSSatish Balay MatScalar m37,m38,m39,m40,m41,m42,m43,m44,m45,m46,m47,m48,m49; 57449b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 57549b5e25fSSatish Balay 57649b5e25fSSatish Balay PetscFunctionBegin; 57749b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(49*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 57849b5e25fSSatish Balay for (i=0; i<n; i++) { 57949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 58049b5e25fSSatish Balay ajtmp = bj + bi[i]; 58149b5e25fSSatish Balay for (j=0; j<nz; j++) { 58249b5e25fSSatish Balay x = rtmp+49*ajtmp[j]; 58349b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 58449b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 58549b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 58649b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 58749b5e25fSSatish Balay x[34] = x[35] = x[36] = x[37] = x[38] = x[39] = x[40] = x[41] = 0.0 ; 58849b5e25fSSatish Balay x[42] = x[43] = x[44] = x[45] = x[46] = x[47] = x[48] = 0.0 ; 58949b5e25fSSatish Balay } 59049b5e25fSSatish Balay /* load in initial (unfactored row) */ 59149b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 59249b5e25fSSatish Balay ajtmpold = aj + ai[i]; 59349b5e25fSSatish Balay v = aa + 49*ai[i]; 59449b5e25fSSatish Balay for (j=0; j<nz; j++) { 59549b5e25fSSatish Balay x = rtmp+49*ajtmpold[j]; 59649b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 59749b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 59849b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 59949b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 60049b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 60149b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 60249b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 60349b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 60449b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 60549b5e25fSSatish Balay x[36] = v[36]; x[37] = v[37]; x[38] = v[38]; x[39] = v[39]; 60649b5e25fSSatish Balay x[40] = v[40]; x[41] = v[41]; x[42] = v[42]; x[43] = v[43]; 60749b5e25fSSatish Balay x[44] = v[44]; x[45] = v[45]; x[46] = v[46]; x[47] = v[47]; 60849b5e25fSSatish Balay x[48] = v[48]; 60949b5e25fSSatish Balay v += 49; 61049b5e25fSSatish Balay } 61149b5e25fSSatish Balay row = *ajtmp++; 61249b5e25fSSatish Balay while (row < i) { 61349b5e25fSSatish Balay pc = rtmp + 49*row; 61449b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 61549b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 61649b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 61749b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 61849b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 61949b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 62049b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 62149b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 62249b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 62349b5e25fSSatish Balay p37 = pc[36]; p38 = pc[37]; p39 = pc[38]; p40 = pc[39]; 62449b5e25fSSatish Balay p41 = pc[40]; p42 = pc[41]; p43 = pc[42]; p44 = pc[43]; 62549b5e25fSSatish Balay p45 = pc[44]; p46 = pc[45]; p47 = pc[46]; p48 = pc[47]; 62649b5e25fSSatish Balay p49 = pc[48]; 62749b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 62849b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 62949b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 63049b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 63149b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 63249b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 63349b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 63449b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 63549b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0 || 63649b5e25fSSatish Balay p37 != 0.0 || p38 != 0.0 || p39 != 0.0 || p40 != 0.0 || 63749b5e25fSSatish Balay p41 != 0.0 || p42 != 0.0 || p43 != 0.0 || p44 != 0.0 || 63849b5e25fSSatish Balay p45 != 0.0 || p46 != 0.0 || p47 != 0.0 || p48 != 0.0 || 63949b5e25fSSatish Balay p49 != 0.0) { 64049b5e25fSSatish Balay pv = ba + 49*diag_offset[row]; 64149b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 64249b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 64349b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 64449b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 64549b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 64649b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 64749b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 64849b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 64949b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 65049b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 65149b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 65249b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 65349b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 65449b5e25fSSatish Balay x49 = pv[48]; 65549b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p8*x2 + p15*x3 + p22*x4 + p29*x5 + p36*x6 + p43*x7; 65649b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p9*x2 + p16*x3 + p23*x4 + p30*x5 + p37*x6 + p44*x7; 65749b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p10*x2 + p17*x3 + p24*x4 + p31*x5 + p38*x6 + p45*x7; 65849b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p11*x2 + p18*x3 + p25*x4 + p32*x5 + p39*x6 + p46*x7; 65949b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p12*x2 + p19*x3 + p26*x4 + p33*x5 + p40*x6 + p47*x7; 66049b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p13*x2 + p20*x3 + p27*x4 + p34*x5 + p41*x6 + p48*x7; 66149b5e25fSSatish Balay pc[6] = m7 = p7*x1 + p14*x2 + p21*x3 + p28*x4 + p35*x5 + p42*x6 + p49*x7; 66249b5e25fSSatish Balay 66349b5e25fSSatish Balay pc[7] = m8 = p1*x8 + p8*x9 + p15*x10 + p22*x11 + p29*x12 + p36*x13 + p43*x14; 66449b5e25fSSatish Balay pc[8] = m9 = p2*x8 + p9*x9 + p16*x10 + p23*x11 + p30*x12 + p37*x13 + p44*x14; 66549b5e25fSSatish Balay pc[9] = m10 = p3*x8 + p10*x9 + p17*x10 + p24*x11 + p31*x12 + p38*x13 + p45*x14; 66649b5e25fSSatish Balay pc[10] = m11 = p4*x8 + p11*x9 + p18*x10 + p25*x11 + p32*x12 + p39*x13 + p46*x14; 66749b5e25fSSatish Balay pc[11] = m12 = p5*x8 + p12*x9 + p19*x10 + p26*x11 + p33*x12 + p40*x13 + p47*x14; 66849b5e25fSSatish Balay pc[12] = m13 = p6*x8 + p13*x9 + p20*x10 + p27*x11 + p34*x12 + p41*x13 + p48*x14; 66949b5e25fSSatish Balay pc[13] = m14 = p7*x8 + p14*x9 + p21*x10 + p28*x11 + p35*x12 + p42*x13 + p49*x14; 67049b5e25fSSatish Balay 67149b5e25fSSatish Balay pc[14] = m15 = p1*x15 + p8*x16 + p15*x17 + p22*x18 + p29*x19 + p36*x20 + p43*x21; 67249b5e25fSSatish Balay pc[15] = m16 = p2*x15 + p9*x16 + p16*x17 + p23*x18 + p30*x19 + p37*x20 + p44*x21; 67349b5e25fSSatish Balay pc[16] = m17 = p3*x15 + p10*x16 + p17*x17 + p24*x18 + p31*x19 + p38*x20 + p45*x21; 67449b5e25fSSatish Balay pc[17] = m18 = p4*x15 + p11*x16 + p18*x17 + p25*x18 + p32*x19 + p39*x20 + p46*x21; 67549b5e25fSSatish Balay pc[18] = m19 = p5*x15 + p12*x16 + p19*x17 + p26*x18 + p33*x19 + p40*x20 + p47*x21; 67649b5e25fSSatish Balay pc[19] = m20 = p6*x15 + p13*x16 + p20*x17 + p27*x18 + p34*x19 + p41*x20 + p48*x21; 67749b5e25fSSatish Balay pc[20] = m21 = p7*x15 + p14*x16 + p21*x17 + p28*x18 + p35*x19 + p42*x20 + p49*x21; 67849b5e25fSSatish Balay 67949b5e25fSSatish Balay pc[21] = m22 = p1*x22 + p8*x23 + p15*x24 + p22*x25 + p29*x26 + p36*x27 + p43*x28; 68049b5e25fSSatish Balay pc[22] = m23 = p2*x22 + p9*x23 + p16*x24 + p23*x25 + p30*x26 + p37*x27 + p44*x28; 68149b5e25fSSatish Balay pc[23] = m24 = p3*x22 + p10*x23 + p17*x24 + p24*x25 + p31*x26 + p38*x27 + p45*x28; 68249b5e25fSSatish Balay pc[24] = m25 = p4*x22 + p11*x23 + p18*x24 + p25*x25 + p32*x26 + p39*x27 + p46*x28; 68349b5e25fSSatish Balay pc[25] = m26 = p5*x22 + p12*x23 + p19*x24 + p26*x25 + p33*x26 + p40*x27 + p47*x28; 68449b5e25fSSatish Balay pc[26] = m27 = p6*x22 + p13*x23 + p20*x24 + p27*x25 + p34*x26 + p41*x27 + p48*x28; 68549b5e25fSSatish Balay pc[27] = m28 = p7*x22 + p14*x23 + p21*x24 + p28*x25 + p35*x26 + p42*x27 + p49*x28; 68649b5e25fSSatish Balay 68749b5e25fSSatish Balay pc[28] = m29 = p1*x29 + p8*x30 + p15*x31 + p22*x32 + p29*x33 + p36*x34 + p43*x35; 68849b5e25fSSatish Balay pc[29] = m30 = p2*x29 + p9*x30 + p16*x31 + p23*x32 + p30*x33 + p37*x34 + p44*x35; 68949b5e25fSSatish Balay pc[30] = m31 = p3*x29 + p10*x30 + p17*x31 + p24*x32 + p31*x33 + p38*x34 + p45*x35; 69049b5e25fSSatish Balay pc[31] = m32 = p4*x29 + p11*x30 + p18*x31 + p25*x32 + p32*x33 + p39*x34 + p46*x35; 69149b5e25fSSatish Balay pc[32] = m33 = p5*x29 + p12*x30 + p19*x31 + p26*x32 + p33*x33 + p40*x34 + p47*x35; 69249b5e25fSSatish Balay pc[33] = m34 = p6*x29 + p13*x30 + p20*x31 + p27*x32 + p34*x33 + p41*x34 + p48*x35; 69349b5e25fSSatish Balay pc[34] = m35 = p7*x29 + p14*x30 + p21*x31 + p28*x32 + p35*x33 + p42*x34 + p49*x35; 69449b5e25fSSatish Balay 69549b5e25fSSatish Balay pc[35] = m36 = p1*x36 + p8*x37 + p15*x38 + p22*x39 + p29*x40 + p36*x41 + p43*x42; 69649b5e25fSSatish Balay pc[36] = m37 = p2*x36 + p9*x37 + p16*x38 + p23*x39 + p30*x40 + p37*x41 + p44*x42; 69749b5e25fSSatish Balay pc[37] = m38 = p3*x36 + p10*x37 + p17*x38 + p24*x39 + p31*x40 + p38*x41 + p45*x42; 69849b5e25fSSatish Balay pc[38] = m39 = p4*x36 + p11*x37 + p18*x38 + p25*x39 + p32*x40 + p39*x41 + p46*x42; 69949b5e25fSSatish Balay pc[39] = m40 = p5*x36 + p12*x37 + p19*x38 + p26*x39 + p33*x40 + p40*x41 + p47*x42; 70049b5e25fSSatish Balay pc[40] = m41 = p6*x36 + p13*x37 + p20*x38 + p27*x39 + p34*x40 + p41*x41 + p48*x42; 70149b5e25fSSatish Balay pc[41] = m42 = p7*x36 + p14*x37 + p21*x38 + p28*x39 + p35*x40 + p42*x41 + p49*x42; 70249b5e25fSSatish Balay 70349b5e25fSSatish Balay pc[42] = m43 = p1*x43 + p8*x44 + p15*x45 + p22*x46 + p29*x47 + p36*x48 + p43*x49; 70449b5e25fSSatish Balay pc[43] = m44 = p2*x43 + p9*x44 + p16*x45 + p23*x46 + p30*x47 + p37*x48 + p44*x49; 70549b5e25fSSatish Balay pc[44] = m45 = p3*x43 + p10*x44 + p17*x45 + p24*x46 + p31*x47 + p38*x48 + p45*x49; 70649b5e25fSSatish Balay pc[45] = m46 = p4*x43 + p11*x44 + p18*x45 + p25*x46 + p32*x47 + p39*x48 + p46*x49; 70749b5e25fSSatish Balay pc[46] = m47 = p5*x43 + p12*x44 + p19*x45 + p26*x46 + p33*x47 + p40*x48 + p47*x49; 70849b5e25fSSatish Balay pc[47] = m48 = p6*x43 + p13*x44 + p20*x45 + p27*x46 + p34*x47 + p41*x48 + p48*x49; 70949b5e25fSSatish Balay pc[48] = m49 = p7*x43 + p14*x44 + p21*x45 + p28*x46 + p35*x47 + p42*x48 + p49*x49; 71049b5e25fSSatish Balay 71149b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 71249b5e25fSSatish Balay pv += 49; 71349b5e25fSSatish Balay for (j=0; j<nz; j++) { 71449b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 71549b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 71649b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 71749b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 71849b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 71949b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 72049b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 72149b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 72249b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 72349b5e25fSSatish Balay x37 = pv[36]; x38 = pv[37]; x39 = pv[38]; x40 = pv[39]; 72449b5e25fSSatish Balay x41 = pv[40]; x42 = pv[41]; x43 = pv[42]; x44 = pv[43]; 72549b5e25fSSatish Balay x45 = pv[44]; x46 = pv[45]; x47 = pv[46]; x48 = pv[47]; 72649b5e25fSSatish Balay x49 = pv[48]; 72749b5e25fSSatish Balay x = rtmp + 49*pj[j]; 72849b5e25fSSatish Balay x[0] -= m1*x1 + m8*x2 + m15*x3 + m22*x4 + m29*x5 + m36*x6 + m43*x7; 72949b5e25fSSatish Balay x[1] -= m2*x1 + m9*x2 + m16*x3 + m23*x4 + m30*x5 + m37*x6 + m44*x7; 73049b5e25fSSatish Balay x[2] -= m3*x1 + m10*x2 + m17*x3 + m24*x4 + m31*x5 + m38*x6 + m45*x7; 73149b5e25fSSatish Balay x[3] -= m4*x1 + m11*x2 + m18*x3 + m25*x4 + m32*x5 + m39*x6 + m46*x7; 73249b5e25fSSatish Balay x[4] -= m5*x1 + m12*x2 + m19*x3 + m26*x4 + m33*x5 + m40*x6 + m47*x7; 73349b5e25fSSatish Balay x[5] -= m6*x1 + m13*x2 + m20*x3 + m27*x4 + m34*x5 + m41*x6 + m48*x7; 73449b5e25fSSatish Balay x[6] -= m7*x1 + m14*x2 + m21*x3 + m28*x4 + m35*x5 + m42*x6 + m49*x7; 73549b5e25fSSatish Balay 73649b5e25fSSatish Balay x[7] -= m1*x8 + m8*x9 + m15*x10 + m22*x11 + m29*x12 + m36*x13 + m43*x14; 73749b5e25fSSatish Balay x[8] -= m2*x8 + m9*x9 + m16*x10 + m23*x11 + m30*x12 + m37*x13 + m44*x14; 73849b5e25fSSatish Balay x[9] -= m3*x8 + m10*x9 + m17*x10 + m24*x11 + m31*x12 + m38*x13 + m45*x14; 73949b5e25fSSatish Balay x[10] -= m4*x8 + m11*x9 + m18*x10 + m25*x11 + m32*x12 + m39*x13 + m46*x14; 74049b5e25fSSatish Balay x[11] -= m5*x8 + m12*x9 + m19*x10 + m26*x11 + m33*x12 + m40*x13 + m47*x14; 74149b5e25fSSatish Balay x[12] -= m6*x8 + m13*x9 + m20*x10 + m27*x11 + m34*x12 + m41*x13 + m48*x14; 74249b5e25fSSatish Balay x[13] -= m7*x8 + m14*x9 + m21*x10 + m28*x11 + m35*x12 + m42*x13 + m49*x14; 74349b5e25fSSatish Balay 74449b5e25fSSatish Balay x[14] -= m1*x15 + m8*x16 + m15*x17 + m22*x18 + m29*x19 + m36*x20 + m43*x21; 74549b5e25fSSatish Balay x[15] -= m2*x15 + m9*x16 + m16*x17 + m23*x18 + m30*x19 + m37*x20 + m44*x21; 74649b5e25fSSatish Balay x[16] -= m3*x15 + m10*x16 + m17*x17 + m24*x18 + m31*x19 + m38*x20 + m45*x21; 74749b5e25fSSatish Balay x[17] -= m4*x15 + m11*x16 + m18*x17 + m25*x18 + m32*x19 + m39*x20 + m46*x21; 74849b5e25fSSatish Balay x[18] -= m5*x15 + m12*x16 + m19*x17 + m26*x18 + m33*x19 + m40*x20 + m47*x21; 74949b5e25fSSatish Balay x[19] -= m6*x15 + m13*x16 + m20*x17 + m27*x18 + m34*x19 + m41*x20 + m48*x21; 75049b5e25fSSatish Balay x[20] -= m7*x15 + m14*x16 + m21*x17 + m28*x18 + m35*x19 + m42*x20 + m49*x21; 75149b5e25fSSatish Balay 75249b5e25fSSatish Balay x[21] -= m1*x22 + m8*x23 + m15*x24 + m22*x25 + m29*x26 + m36*x27 + m43*x28; 75349b5e25fSSatish Balay x[22] -= m2*x22 + m9*x23 + m16*x24 + m23*x25 + m30*x26 + m37*x27 + m44*x28; 75449b5e25fSSatish Balay x[23] -= m3*x22 + m10*x23 + m17*x24 + m24*x25 + m31*x26 + m38*x27 + m45*x28; 75549b5e25fSSatish Balay x[24] -= m4*x22 + m11*x23 + m18*x24 + m25*x25 + m32*x26 + m39*x27 + m46*x28; 75649b5e25fSSatish Balay x[25] -= m5*x22 + m12*x23 + m19*x24 + m26*x25 + m33*x26 + m40*x27 + m47*x28; 75749b5e25fSSatish Balay x[26] -= m6*x22 + m13*x23 + m20*x24 + m27*x25 + m34*x26 + m41*x27 + m48*x28; 75849b5e25fSSatish Balay x[27] -= m7*x22 + m14*x23 + m21*x24 + m28*x25 + m35*x26 + m42*x27 + m49*x28; 75949b5e25fSSatish Balay 76049b5e25fSSatish Balay x[28] -= m1*x29 + m8*x30 + m15*x31 + m22*x32 + m29*x33 + m36*x34 + m43*x35; 76149b5e25fSSatish Balay x[29] -= m2*x29 + m9*x30 + m16*x31 + m23*x32 + m30*x33 + m37*x34 + m44*x35; 76249b5e25fSSatish Balay x[30] -= m3*x29 + m10*x30 + m17*x31 + m24*x32 + m31*x33 + m38*x34 + m45*x35; 76349b5e25fSSatish Balay x[31] -= m4*x29 + m11*x30 + m18*x31 + m25*x32 + m32*x33 + m39*x34 + m46*x35; 76449b5e25fSSatish Balay x[32] -= m5*x29 + m12*x30 + m19*x31 + m26*x32 + m33*x33 + m40*x34 + m47*x35; 76549b5e25fSSatish Balay x[33] -= m6*x29 + m13*x30 + m20*x31 + m27*x32 + m34*x33 + m41*x34 + m48*x35; 76649b5e25fSSatish Balay x[34] -= m7*x29 + m14*x30 + m21*x31 + m28*x32 + m35*x33 + m42*x34 + m49*x35; 76749b5e25fSSatish Balay 76849b5e25fSSatish Balay x[35] -= m1*x36 + m8*x37 + m15*x38 + m22*x39 + m29*x40 + m36*x41 + m43*x42; 76949b5e25fSSatish Balay x[36] -= m2*x36 + m9*x37 + m16*x38 + m23*x39 + m30*x40 + m37*x41 + m44*x42; 77049b5e25fSSatish Balay x[37] -= m3*x36 + m10*x37 + m17*x38 + m24*x39 + m31*x40 + m38*x41 + m45*x42; 77149b5e25fSSatish Balay x[38] -= m4*x36 + m11*x37 + m18*x38 + m25*x39 + m32*x40 + m39*x41 + m46*x42; 77249b5e25fSSatish Balay x[39] -= m5*x36 + m12*x37 + m19*x38 + m26*x39 + m33*x40 + m40*x41 + m47*x42; 77349b5e25fSSatish Balay x[40] -= m6*x36 + m13*x37 + m20*x38 + m27*x39 + m34*x40 + m41*x41 + m48*x42; 77449b5e25fSSatish Balay x[41] -= m7*x36 + m14*x37 + m21*x38 + m28*x39 + m35*x40 + m42*x41 + m49*x42; 77549b5e25fSSatish Balay 77649b5e25fSSatish Balay x[42] -= m1*x43 + m8*x44 + m15*x45 + m22*x46 + m29*x47 + m36*x48 + m43*x49; 77749b5e25fSSatish Balay x[43] -= m2*x43 + m9*x44 + m16*x45 + m23*x46 + m30*x47 + m37*x48 + m44*x49; 77849b5e25fSSatish Balay x[44] -= m3*x43 + m10*x44 + m17*x45 + m24*x46 + m31*x47 + m38*x48 + m45*x49; 77949b5e25fSSatish Balay x[45] -= m4*x43 + m11*x44 + m18*x45 + m25*x46 + m32*x47 + m39*x48 + m46*x49; 78049b5e25fSSatish Balay x[46] -= m5*x43 + m12*x44 + m19*x45 + m26*x46 + m33*x47 + m40*x48 + m47*x49; 78149b5e25fSSatish Balay x[47] -= m6*x43 + m13*x44 + m20*x45 + m27*x46 + m34*x47 + m41*x48 + m48*x49; 78249b5e25fSSatish Balay x[48] -= m7*x43 + m14*x44 + m21*x45 + m28*x46 + m35*x47 + m42*x48 + m49*x49; 78349b5e25fSSatish Balay pv += 49; 78449b5e25fSSatish Balay } 78549b5e25fSSatish Balay PLogFlops(686*nz+637); 78649b5e25fSSatish Balay } 78749b5e25fSSatish Balay row = *ajtmp++; 78849b5e25fSSatish Balay } 78949b5e25fSSatish Balay /* finished row so stick it into b->a */ 79049b5e25fSSatish Balay pv = ba + 49*bi[i]; 79149b5e25fSSatish Balay pj = bj + bi[i]; 79249b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 79349b5e25fSSatish Balay for (j=0; j<nz; j++) { 79449b5e25fSSatish Balay x = rtmp+49*pj[j]; 79549b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 79649b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 79749b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 79849b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 79949b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 80049b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 80149b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 80249b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 80349b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 80449b5e25fSSatish Balay pv[36] = x[36]; pv[37] = x[37]; pv[38] = x[38]; pv[39] = x[39]; 80549b5e25fSSatish Balay pv[40] = x[40]; pv[41] = x[41]; pv[42] = x[42]; pv[43] = x[43]; 80649b5e25fSSatish Balay pv[44] = x[44]; pv[45] = x[45]; pv[46] = x[46]; pv[47] = x[47]; 80749b5e25fSSatish Balay pv[48] = x[48]; 80849b5e25fSSatish Balay pv += 49; 80949b5e25fSSatish Balay } 81049b5e25fSSatish Balay /* invert diagonal block */ 81149b5e25fSSatish Balay w = ba + 49*diag_offset[i]; 81249b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_7(w);CHKERRQ(ierr); 81349b5e25fSSatish Balay } 81449b5e25fSSatish Balay 81549b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 81649b5e25fSSatish Balay C->factor = FACTOR_LU; 81749b5e25fSSatish Balay C->assembled = PETSC_TRUE; 81849b5e25fSSatish Balay PLogFlops(1.3333*343*b->mbs); /* from inverting diagonal blocks */ 81949b5e25fSSatish Balay PetscFunctionReturn(0); 82049b5e25fSSatish Balay } 82149b5e25fSSatish Balay 82249b5e25fSSatish Balay /* ------------------------------------------------------------*/ 82349b5e25fSSatish Balay /* 82449b5e25fSSatish Balay Version for when blocks are 6 by 6 82549b5e25fSSatish Balay */ 82649b5e25fSSatish Balay #undef __FUNC__ 8276f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6" 8286f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6(Mat A,Mat *B) 82949b5e25fSSatish Balay { 83049b5e25fSSatish Balay Mat C = *B; 83149b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 83249b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 83349b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 83449b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 83549b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 83649b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 83749b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 83849b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 83949b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 84049b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 84149b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 84249b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 84349b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 84449b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 84549b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 84649b5e25fSSatish Balay 84749b5e25fSSatish Balay PetscFunctionBegin; 84849b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 84949b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 85049b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 85149b5e25fSSatish Balay 85249b5e25fSSatish Balay for (i=0; i<n; i++) { 85349b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 85449b5e25fSSatish Balay ajtmp = bj + bi[i]; 85549b5e25fSSatish Balay for (j=0; j<nz; j++) { 85649b5e25fSSatish Balay x = rtmp+36*ajtmp[j]; 85749b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 85849b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 85949b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 86049b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 86149b5e25fSSatish Balay x[34] = x[35] = 0.0 ; 86249b5e25fSSatish Balay } 86349b5e25fSSatish Balay /* load in initial (unfactored row) */ 86449b5e25fSSatish Balay idx = r[i]; 86549b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 86649b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 86749b5e25fSSatish Balay v = aa + 36*ai[idx]; 86849b5e25fSSatish Balay for (j=0; j<nz; j++) { 86949b5e25fSSatish Balay x = rtmp+36*ic[ajtmpold[j]]; 87049b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 87149b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 87249b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 87349b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 87449b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 87549b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 87649b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 87749b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 87849b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 87949b5e25fSSatish Balay v += 36; 88049b5e25fSSatish Balay } 88149b5e25fSSatish Balay row = *ajtmp++; 88249b5e25fSSatish Balay while (row < i) { 88349b5e25fSSatish Balay pc = rtmp + 36*row; 88449b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 88549b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 88649b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 88749b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 88849b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 88949b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 89049b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 89149b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 89249b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 89349b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 89449b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 89549b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 89649b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 89749b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 89849b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 89949b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 90049b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 90149b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) { 90249b5e25fSSatish Balay pv = ba + 36*diag_offset[row]; 90349b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 90449b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 90549b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 90649b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 90749b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 90849b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 90949b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 91049b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 91149b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 91249b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 91349b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p7*x2 + p13*x3 + p19*x4 + p25*x5 + p31*x6; 91449b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p8*x2 + p14*x3 + p20*x4 + p26*x5 + p32*x6; 91549b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p9*x2 + p15*x3 + p21*x4 + p27*x5 + p33*x6; 91649b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p10*x2 + p16*x3 + p22*x4 + p28*x5 + p34*x6; 91749b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p11*x2 + p17*x3 + p23*x4 + p29*x5 + p35*x6; 91849b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p12*x2 + p18*x3 + p24*x4 + p30*x5 + p36*x6; 91949b5e25fSSatish Balay 92049b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p7*x8 + p13*x9 + p19*x10 + p25*x11 + p31*x12; 92149b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p8*x8 + p14*x9 + p20*x10 + p26*x11 + p32*x12; 92249b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p9*x8 + p15*x9 + p21*x10 + p27*x11 + p33*x12; 92349b5e25fSSatish Balay pc[9] = m10 = p4*x7 + p10*x8 + p16*x9 + p22*x10 + p28*x11 + p34*x12; 92449b5e25fSSatish Balay pc[10] = m11 = p5*x7 + p11*x8 + p17*x9 + p23*x10 + p29*x11 + p35*x12; 92549b5e25fSSatish Balay pc[11] = m12 = p6*x7 + p12*x8 + p18*x9 + p24*x10 + p30*x11 + p36*x12; 92649b5e25fSSatish Balay 92749b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p7*x14 + p13*x15 + p19*x16 + p25*x17 + p31*x18; 92849b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p8*x14 + p14*x15 + p20*x16 + p26*x17 + p32*x18; 92949b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p9*x14 + p15*x15 + p21*x16 + p27*x17 + p33*x18; 93049b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18; 93149b5e25fSSatish Balay pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18; 93249b5e25fSSatish Balay pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18; 93349b5e25fSSatish Balay 93449b5e25fSSatish Balay pc[18] = m19 = p1*x19 + p7*x20 + p13*x21 + p19*x22 + p25*x23 + p31*x24; 93549b5e25fSSatish Balay pc[19] = m20 = p2*x19 + p8*x20 + p14*x21 + p20*x22 + p26*x23 + p32*x24; 93649b5e25fSSatish Balay pc[20] = m21 = p3*x19 + p9*x20 + p15*x21 + p21*x22 + p27*x23 + p33*x24; 93749b5e25fSSatish Balay pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24; 93849b5e25fSSatish Balay pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24; 93949b5e25fSSatish Balay pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24; 94049b5e25fSSatish Balay 94149b5e25fSSatish Balay pc[24] = m25 = p1*x25 + p7*x26 + p13*x27 + p19*x28 + p25*x29 + p31*x30; 94249b5e25fSSatish Balay pc[25] = m26 = p2*x25 + p8*x26 + p14*x27 + p20*x28 + p26*x29 + p32*x30; 94349b5e25fSSatish Balay pc[26] = m27 = p3*x25 + p9*x26 + p15*x27 + p21*x28 + p27*x29 + p33*x30; 94449b5e25fSSatish Balay pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30; 94549b5e25fSSatish Balay pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30; 94649b5e25fSSatish Balay pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30; 94749b5e25fSSatish Balay 94849b5e25fSSatish Balay pc[30] = m31 = p1*x31 + p7*x32 + p13*x33 + p19*x34 + p25*x35 + p31*x36; 94949b5e25fSSatish Balay pc[31] = m32 = p2*x31 + p8*x32 + p14*x33 + p20*x34 + p26*x35 + p32*x36; 95049b5e25fSSatish Balay pc[32] = m33 = p3*x31 + p9*x32 + p15*x33 + p21*x34 + p27*x35 + p33*x36; 95149b5e25fSSatish Balay pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36; 95249b5e25fSSatish Balay pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36; 95349b5e25fSSatish Balay pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36; 95449b5e25fSSatish Balay 95549b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 95649b5e25fSSatish Balay pv += 36; 95749b5e25fSSatish Balay for (j=0; j<nz; j++) { 95849b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 95949b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 96049b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 96149b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 96249b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 96349b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 96449b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 96549b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 96649b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 96749b5e25fSSatish Balay x = rtmp + 36*pj[j]; 96849b5e25fSSatish Balay x[0] -= m1*x1 + m7*x2 + m13*x3 + m19*x4 + m25*x5 + m31*x6; 96949b5e25fSSatish Balay x[1] -= m2*x1 + m8*x2 + m14*x3 + m20*x4 + m26*x5 + m32*x6; 97049b5e25fSSatish Balay x[2] -= m3*x1 + m9*x2 + m15*x3 + m21*x4 + m27*x5 + m33*x6; 97149b5e25fSSatish Balay x[3] -= m4*x1 + m10*x2 + m16*x3 + m22*x4 + m28*x5 + m34*x6; 97249b5e25fSSatish Balay x[4] -= m5*x1 + m11*x2 + m17*x3 + m23*x4 + m29*x5 + m35*x6; 97349b5e25fSSatish Balay x[5] -= m6*x1 + m12*x2 + m18*x3 + m24*x4 + m30*x5 + m36*x6; 97449b5e25fSSatish Balay 97549b5e25fSSatish Balay x[6] -= m1*x7 + m7*x8 + m13*x9 + m19*x10 + m25*x11 + m31*x12; 97649b5e25fSSatish Balay x[7] -= m2*x7 + m8*x8 + m14*x9 + m20*x10 + m26*x11 + m32*x12; 97749b5e25fSSatish Balay x[8] -= m3*x7 + m9*x8 + m15*x9 + m21*x10 + m27*x11 + m33*x12; 97849b5e25fSSatish Balay x[9] -= m4*x7 + m10*x8 + m16*x9 + m22*x10 + m28*x11 + m34*x12; 97949b5e25fSSatish Balay x[10] -= m5*x7 + m11*x8 + m17*x9 + m23*x10 + m29*x11 + m35*x12; 98049b5e25fSSatish Balay x[11] -= m6*x7 + m12*x8 + m18*x9 + m24*x10 + m30*x11 + m36*x12; 98149b5e25fSSatish Balay 98249b5e25fSSatish Balay x[12] -= m1*x13 + m7*x14 + m13*x15 + m19*x16 + m25*x17 + m31*x18; 98349b5e25fSSatish Balay x[13] -= m2*x13 + m8*x14 + m14*x15 + m20*x16 + m26*x17 + m32*x18; 98449b5e25fSSatish Balay x[14] -= m3*x13 + m9*x14 + m15*x15 + m21*x16 + m27*x17 + m33*x18; 98549b5e25fSSatish Balay x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18; 98649b5e25fSSatish Balay x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18; 98749b5e25fSSatish Balay x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18; 98849b5e25fSSatish Balay 98949b5e25fSSatish Balay x[18] -= m1*x19 + m7*x20 + m13*x21 + m19*x22 + m25*x23 + m31*x24; 99049b5e25fSSatish Balay x[19] -= m2*x19 + m8*x20 + m14*x21 + m20*x22 + m26*x23 + m32*x24; 99149b5e25fSSatish Balay x[20] -= m3*x19 + m9*x20 + m15*x21 + m21*x22 + m27*x23 + m33*x24; 99249b5e25fSSatish Balay x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24; 99349b5e25fSSatish Balay x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24; 99449b5e25fSSatish Balay x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24; 99549b5e25fSSatish Balay 99649b5e25fSSatish Balay x[24] -= m1*x25 + m7*x26 + m13*x27 + m19*x28 + m25*x29 + m31*x30; 99749b5e25fSSatish Balay x[25] -= m2*x25 + m8*x26 + m14*x27 + m20*x28 + m26*x29 + m32*x30; 99849b5e25fSSatish Balay x[26] -= m3*x25 + m9*x26 + m15*x27 + m21*x28 + m27*x29 + m33*x30; 99949b5e25fSSatish Balay x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30; 100049b5e25fSSatish Balay x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30; 100149b5e25fSSatish Balay x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30; 100249b5e25fSSatish Balay 100349b5e25fSSatish Balay x[30] -= m1*x31 + m7*x32 + m13*x33 + m19*x34 + m25*x35 + m31*x36; 100449b5e25fSSatish Balay x[31] -= m2*x31 + m8*x32 + m14*x33 + m20*x34 + m26*x35 + m32*x36; 100549b5e25fSSatish Balay x[32] -= m3*x31 + m9*x32 + m15*x33 + m21*x34 + m27*x35 + m33*x36; 100649b5e25fSSatish Balay x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36; 100749b5e25fSSatish Balay x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36; 100849b5e25fSSatish Balay x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36; 100949b5e25fSSatish Balay 101049b5e25fSSatish Balay pv += 36; 101149b5e25fSSatish Balay } 101249b5e25fSSatish Balay PLogFlops(432*nz+396); 101349b5e25fSSatish Balay } 101449b5e25fSSatish Balay row = *ajtmp++; 101549b5e25fSSatish Balay } 101649b5e25fSSatish Balay /* finished row so stick it into b->a */ 101749b5e25fSSatish Balay pv = ba + 36*bi[i]; 101849b5e25fSSatish Balay pj = bj + bi[i]; 101949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 102049b5e25fSSatish Balay for (j=0; j<nz; j++) { 102149b5e25fSSatish Balay x = rtmp+36*pj[j]; 102249b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 102349b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 102449b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 102549b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 102649b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 102749b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 102849b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 102949b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 103049b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 103149b5e25fSSatish Balay pv += 36; 103249b5e25fSSatish Balay } 103349b5e25fSSatish Balay /* invert diagonal block */ 103449b5e25fSSatish Balay w = ba + 36*diag_offset[i]; 103549b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr); 103649b5e25fSSatish Balay } 103749b5e25fSSatish Balay 103849b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 103949b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 104049b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 104149b5e25fSSatish Balay C->factor = FACTOR_LU; 104249b5e25fSSatish Balay C->assembled = PETSC_TRUE; 104349b5e25fSSatish Balay PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */ 104449b5e25fSSatish Balay PetscFunctionReturn(0); 104549b5e25fSSatish Balay } 104649b5e25fSSatish Balay /* 104749b5e25fSSatish Balay Version for when blocks are 6 by 6 Using natural ordering 104849b5e25fSSatish Balay */ 104949b5e25fSSatish Balay #undef __FUNC__ 10506f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering" 10516f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_6_NaturalOrdering(Mat A,Mat *B) 105249b5e25fSSatish Balay { 105349b5e25fSSatish Balay Mat C = *B; 105449b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 105549b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 105649b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 105749b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 105849b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 105949b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 106049b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 106149b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 106249b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 106349b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 106449b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 106549b5e25fSSatish Balay MatScalar p26,p27,p28,p29,p30,p31,p32,p33,p34,p35,p36; 106649b5e25fSSatish Balay MatScalar x26,x27,x28,x29,x30,x31,x32,x33,x34,x35,x36; 106749b5e25fSSatish Balay MatScalar m26,m27,m28,m29,m30,m31,m32,m33,m34,m35,m36; 106849b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 106949b5e25fSSatish Balay 107049b5e25fSSatish Balay PetscFunctionBegin; 107149b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(36*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 107249b5e25fSSatish Balay for (i=0; i<n; i++) { 107349b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 107449b5e25fSSatish Balay ajtmp = bj + bi[i]; 107549b5e25fSSatish Balay for (j=0; j<nz; j++) { 107649b5e25fSSatish Balay x = rtmp+36*ajtmp[j]; 107749b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 107849b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 107949b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = x[25] = 0.0 ; 108049b5e25fSSatish Balay x[26] = x[27] = x[28] = x[29] = x[30] = x[31] = x[32] = x[33] = 0.0 ; 108149b5e25fSSatish Balay x[34] = x[35] = 0.0 ; 108249b5e25fSSatish Balay } 108349b5e25fSSatish Balay /* load in initial (unfactored row) */ 108449b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 108549b5e25fSSatish Balay ajtmpold = aj + ai[i]; 108649b5e25fSSatish Balay v = aa + 36*ai[i]; 108749b5e25fSSatish Balay for (j=0; j<nz; j++) { 108849b5e25fSSatish Balay x = rtmp+36*ajtmpold[j]; 108949b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 109049b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; 109149b5e25fSSatish Balay x[8] = v[8]; x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; 109249b5e25fSSatish Balay x[12] = v[12]; x[13] = v[13]; x[14] = v[14]; x[15] = v[15]; 109349b5e25fSSatish Balay x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; x[19] = v[19]; 109449b5e25fSSatish Balay x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 109549b5e25fSSatish Balay x[24] = v[24]; x[25] = v[25]; x[26] = v[26]; x[27] = v[27]; 109649b5e25fSSatish Balay x[28] = v[28]; x[29] = v[29]; x[30] = v[30]; x[31] = v[31]; 109749b5e25fSSatish Balay x[32] = v[32]; x[33] = v[33]; x[34] = v[34]; x[35] = v[35]; 109849b5e25fSSatish Balay v += 36; 109949b5e25fSSatish Balay } 110049b5e25fSSatish Balay row = *ajtmp++; 110149b5e25fSSatish Balay while (row < i) { 110249b5e25fSSatish Balay pc = rtmp + 36*row; 110349b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 110449b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; 110549b5e25fSSatish Balay p9 = pc[8]; p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; 110649b5e25fSSatish Balay p13 = pc[12]; p14 = pc[13]; p15 = pc[14]; p16 = pc[15]; 110749b5e25fSSatish Balay p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; p20 = pc[19]; 110849b5e25fSSatish Balay p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 110949b5e25fSSatish Balay p25 = pc[24]; p26 = pc[25]; p27 = pc[26]; p28 = pc[27]; 111049b5e25fSSatish Balay p29 = pc[28]; p30 = pc[29]; p31 = pc[30]; p32 = pc[31]; 111149b5e25fSSatish Balay p33 = pc[32]; p34 = pc[33]; p35 = pc[34]; p36 = pc[35]; 111249b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || 111349b5e25fSSatish Balay p5 != 0.0 || p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || 111449b5e25fSSatish Balay p9 != 0.0 || p10 != 0.0 || p11 != 0.0 || p12 != 0.0 || 111549b5e25fSSatish Balay p13 != 0.0 || p14 != 0.0 || p15 != 0.0 || p16 != 0.0 || 111649b5e25fSSatish Balay p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 || 111749b5e25fSSatish Balay p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || 111849b5e25fSSatish Balay p25 != 0.0 || p26 != 0.0 || p27 != 0.0 || p28 != 0.0 || 111949b5e25fSSatish Balay p29 != 0.0 || p30 != 0.0 || p31 != 0.0 || p32 != 0.0 || 112049b5e25fSSatish Balay p33 != 0.0 || p34 != 0.0 || p35 != 0.0 || p36 != 0.0) { 112149b5e25fSSatish Balay pv = ba + 36*diag_offset[row]; 112249b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 112349b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 112449b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 112549b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 112649b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 112749b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 112849b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 112949b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 113049b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 113149b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 113249b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p7*x2 + p13*x3 + p19*x4 + p25*x5 + p31*x6; 113349b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p8*x2 + p14*x3 + p20*x4 + p26*x5 + p32*x6; 113449b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p9*x2 + p15*x3 + p21*x4 + p27*x5 + p33*x6; 113549b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p10*x2 + p16*x3 + p22*x4 + p28*x5 + p34*x6; 113649b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p11*x2 + p17*x3 + p23*x4 + p29*x5 + p35*x6; 113749b5e25fSSatish Balay pc[5] = m6 = p6*x1 + p12*x2 + p18*x3 + p24*x4 + p30*x5 + p36*x6; 113849b5e25fSSatish Balay 113949b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p7*x8 + p13*x9 + p19*x10 + p25*x11 + p31*x12; 114049b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p8*x8 + p14*x9 + p20*x10 + p26*x11 + p32*x12; 114149b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p9*x8 + p15*x9 + p21*x10 + p27*x11 + p33*x12; 114249b5e25fSSatish Balay pc[9] = m10 = p4*x7 + p10*x8 + p16*x9 + p22*x10 + p28*x11 + p34*x12; 114349b5e25fSSatish Balay pc[10] = m11 = p5*x7 + p11*x8 + p17*x9 + p23*x10 + p29*x11 + p35*x12; 114449b5e25fSSatish Balay pc[11] = m12 = p6*x7 + p12*x8 + p18*x9 + p24*x10 + p30*x11 + p36*x12; 114549b5e25fSSatish Balay 114649b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p7*x14 + p13*x15 + p19*x16 + p25*x17 + p31*x18; 114749b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p8*x14 + p14*x15 + p20*x16 + p26*x17 + p32*x18; 114849b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p9*x14 + p15*x15 + p21*x16 + p27*x17 + p33*x18; 114949b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p10*x14 + p16*x15 + p22*x16 + p28*x17 + p34*x18; 115049b5e25fSSatish Balay pc[16] = m17 = p5*x13 + p11*x14 + p17*x15 + p23*x16 + p29*x17 + p35*x18; 115149b5e25fSSatish Balay pc[17] = m18 = p6*x13 + p12*x14 + p18*x15 + p24*x16 + p30*x17 + p36*x18; 115249b5e25fSSatish Balay 115349b5e25fSSatish Balay pc[18] = m19 = p1*x19 + p7*x20 + p13*x21 + p19*x22 + p25*x23 + p31*x24; 115449b5e25fSSatish Balay pc[19] = m20 = p2*x19 + p8*x20 + p14*x21 + p20*x22 + p26*x23 + p32*x24; 115549b5e25fSSatish Balay pc[20] = m21 = p3*x19 + p9*x20 + p15*x21 + p21*x22 + p27*x23 + p33*x24; 115649b5e25fSSatish Balay pc[21] = m22 = p4*x19 + p10*x20 + p16*x21 + p22*x22 + p28*x23 + p34*x24; 115749b5e25fSSatish Balay pc[22] = m23 = p5*x19 + p11*x20 + p17*x21 + p23*x22 + p29*x23 + p35*x24; 115849b5e25fSSatish Balay pc[23] = m24 = p6*x19 + p12*x20 + p18*x21 + p24*x22 + p30*x23 + p36*x24; 115949b5e25fSSatish Balay 116049b5e25fSSatish Balay pc[24] = m25 = p1*x25 + p7*x26 + p13*x27 + p19*x28 + p25*x29 + p31*x30; 116149b5e25fSSatish Balay pc[25] = m26 = p2*x25 + p8*x26 + p14*x27 + p20*x28 + p26*x29 + p32*x30; 116249b5e25fSSatish Balay pc[26] = m27 = p3*x25 + p9*x26 + p15*x27 + p21*x28 + p27*x29 + p33*x30; 116349b5e25fSSatish Balay pc[27] = m28 = p4*x25 + p10*x26 + p16*x27 + p22*x28 + p28*x29 + p34*x30; 116449b5e25fSSatish Balay pc[28] = m29 = p5*x25 + p11*x26 + p17*x27 + p23*x28 + p29*x29 + p35*x30; 116549b5e25fSSatish Balay pc[29] = m30 = p6*x25 + p12*x26 + p18*x27 + p24*x28 + p30*x29 + p36*x30; 116649b5e25fSSatish Balay 116749b5e25fSSatish Balay pc[30] = m31 = p1*x31 + p7*x32 + p13*x33 + p19*x34 + p25*x35 + p31*x36; 116849b5e25fSSatish Balay pc[31] = m32 = p2*x31 + p8*x32 + p14*x33 + p20*x34 + p26*x35 + p32*x36; 116949b5e25fSSatish Balay pc[32] = m33 = p3*x31 + p9*x32 + p15*x33 + p21*x34 + p27*x35 + p33*x36; 117049b5e25fSSatish Balay pc[33] = m34 = p4*x31 + p10*x32 + p16*x33 + p22*x34 + p28*x35 + p34*x36; 117149b5e25fSSatish Balay pc[34] = m35 = p5*x31 + p11*x32 + p17*x33 + p23*x34 + p29*x35 + p35*x36; 117249b5e25fSSatish Balay pc[35] = m36 = p6*x31 + p12*x32 + p18*x33 + p24*x34 + p30*x35 + p36*x36; 117349b5e25fSSatish Balay 117449b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 117549b5e25fSSatish Balay pv += 36; 117649b5e25fSSatish Balay for (j=0; j<nz; j++) { 117749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 117849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; 117949b5e25fSSatish Balay x9 = pv[8]; x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; 118049b5e25fSSatish Balay x13 = pv[12]; x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 118149b5e25fSSatish Balay x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; 118249b5e25fSSatish Balay x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 118349b5e25fSSatish Balay x25 = pv[24]; x26 = pv[25]; x27 = pv[26]; x28 = pv[27]; 118449b5e25fSSatish Balay x29 = pv[28]; x30 = pv[29]; x31 = pv[30]; x32 = pv[31]; 118549b5e25fSSatish Balay x33 = pv[32]; x34 = pv[33]; x35 = pv[34]; x36 = pv[35]; 118649b5e25fSSatish Balay x = rtmp + 36*pj[j]; 118749b5e25fSSatish Balay x[0] -= m1*x1 + m7*x2 + m13*x3 + m19*x4 + m25*x5 + m31*x6; 118849b5e25fSSatish Balay x[1] -= m2*x1 + m8*x2 + m14*x3 + m20*x4 + m26*x5 + m32*x6; 118949b5e25fSSatish Balay x[2] -= m3*x1 + m9*x2 + m15*x3 + m21*x4 + m27*x5 + m33*x6; 119049b5e25fSSatish Balay x[3] -= m4*x1 + m10*x2 + m16*x3 + m22*x4 + m28*x5 + m34*x6; 119149b5e25fSSatish Balay x[4] -= m5*x1 + m11*x2 + m17*x3 + m23*x4 + m29*x5 + m35*x6; 119249b5e25fSSatish Balay x[5] -= m6*x1 + m12*x2 + m18*x3 + m24*x4 + m30*x5 + m36*x6; 119349b5e25fSSatish Balay 119449b5e25fSSatish Balay x[6] -= m1*x7 + m7*x8 + m13*x9 + m19*x10 + m25*x11 + m31*x12; 119549b5e25fSSatish Balay x[7] -= m2*x7 + m8*x8 + m14*x9 + m20*x10 + m26*x11 + m32*x12; 119649b5e25fSSatish Balay x[8] -= m3*x7 + m9*x8 + m15*x9 + m21*x10 + m27*x11 + m33*x12; 119749b5e25fSSatish Balay x[9] -= m4*x7 + m10*x8 + m16*x9 + m22*x10 + m28*x11 + m34*x12; 119849b5e25fSSatish Balay x[10] -= m5*x7 + m11*x8 + m17*x9 + m23*x10 + m29*x11 + m35*x12; 119949b5e25fSSatish Balay x[11] -= m6*x7 + m12*x8 + m18*x9 + m24*x10 + m30*x11 + m36*x12; 120049b5e25fSSatish Balay 120149b5e25fSSatish Balay x[12] -= m1*x13 + m7*x14 + m13*x15 + m19*x16 + m25*x17 + m31*x18; 120249b5e25fSSatish Balay x[13] -= m2*x13 + m8*x14 + m14*x15 + m20*x16 + m26*x17 + m32*x18; 120349b5e25fSSatish Balay x[14] -= m3*x13 + m9*x14 + m15*x15 + m21*x16 + m27*x17 + m33*x18; 120449b5e25fSSatish Balay x[15] -= m4*x13 + m10*x14 + m16*x15 + m22*x16 + m28*x17 + m34*x18; 120549b5e25fSSatish Balay x[16] -= m5*x13 + m11*x14 + m17*x15 + m23*x16 + m29*x17 + m35*x18; 120649b5e25fSSatish Balay x[17] -= m6*x13 + m12*x14 + m18*x15 + m24*x16 + m30*x17 + m36*x18; 120749b5e25fSSatish Balay 120849b5e25fSSatish Balay x[18] -= m1*x19 + m7*x20 + m13*x21 + m19*x22 + m25*x23 + m31*x24; 120949b5e25fSSatish Balay x[19] -= m2*x19 + m8*x20 + m14*x21 + m20*x22 + m26*x23 + m32*x24; 121049b5e25fSSatish Balay x[20] -= m3*x19 + m9*x20 + m15*x21 + m21*x22 + m27*x23 + m33*x24; 121149b5e25fSSatish Balay x[21] -= m4*x19 + m10*x20 + m16*x21 + m22*x22 + m28*x23 + m34*x24; 121249b5e25fSSatish Balay x[22] -= m5*x19 + m11*x20 + m17*x21 + m23*x22 + m29*x23 + m35*x24; 121349b5e25fSSatish Balay x[23] -= m6*x19 + m12*x20 + m18*x21 + m24*x22 + m30*x23 + m36*x24; 121449b5e25fSSatish Balay 121549b5e25fSSatish Balay x[24] -= m1*x25 + m7*x26 + m13*x27 + m19*x28 + m25*x29 + m31*x30; 121649b5e25fSSatish Balay x[25] -= m2*x25 + m8*x26 + m14*x27 + m20*x28 + m26*x29 + m32*x30; 121749b5e25fSSatish Balay x[26] -= m3*x25 + m9*x26 + m15*x27 + m21*x28 + m27*x29 + m33*x30; 121849b5e25fSSatish Balay x[27] -= m4*x25 + m10*x26 + m16*x27 + m22*x28 + m28*x29 + m34*x30; 121949b5e25fSSatish Balay x[28] -= m5*x25 + m11*x26 + m17*x27 + m23*x28 + m29*x29 + m35*x30; 122049b5e25fSSatish Balay x[29] -= m6*x25 + m12*x26 + m18*x27 + m24*x28 + m30*x29 + m36*x30; 122149b5e25fSSatish Balay 122249b5e25fSSatish Balay x[30] -= m1*x31 + m7*x32 + m13*x33 + m19*x34 + m25*x35 + m31*x36; 122349b5e25fSSatish Balay x[31] -= m2*x31 + m8*x32 + m14*x33 + m20*x34 + m26*x35 + m32*x36; 122449b5e25fSSatish Balay x[32] -= m3*x31 + m9*x32 + m15*x33 + m21*x34 + m27*x35 + m33*x36; 122549b5e25fSSatish Balay x[33] -= m4*x31 + m10*x32 + m16*x33 + m22*x34 + m28*x35 + m34*x36; 122649b5e25fSSatish Balay x[34] -= m5*x31 + m11*x32 + m17*x33 + m23*x34 + m29*x35 + m35*x36; 122749b5e25fSSatish Balay x[35] -= m6*x31 + m12*x32 + m18*x33 + m24*x34 + m30*x35 + m36*x36; 122849b5e25fSSatish Balay 122949b5e25fSSatish Balay pv += 36; 123049b5e25fSSatish Balay } 123149b5e25fSSatish Balay PLogFlops(432*nz+396); 123249b5e25fSSatish Balay } 123349b5e25fSSatish Balay row = *ajtmp++; 123449b5e25fSSatish Balay } 123549b5e25fSSatish Balay /* finished row so stick it into b->a */ 123649b5e25fSSatish Balay pv = ba + 36*bi[i]; 123749b5e25fSSatish Balay pj = bj + bi[i]; 123849b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 123949b5e25fSSatish Balay for (j=0; j<nz; j++) { 124049b5e25fSSatish Balay x = rtmp+36*pj[j]; 124149b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 124249b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; 124349b5e25fSSatish Balay pv[8] = x[8]; pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; 124449b5e25fSSatish Balay pv[12] = x[12]; pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 124549b5e25fSSatish Balay pv[16] = x[16]; pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; 124649b5e25fSSatish Balay pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; 124749b5e25fSSatish Balay pv[24] = x[24]; pv[25] = x[25]; pv[26] = x[26]; pv[27] = x[27]; 124849b5e25fSSatish Balay pv[28] = x[28]; pv[29] = x[29]; pv[30] = x[30]; pv[31] = x[31]; 124949b5e25fSSatish Balay pv[32] = x[32]; pv[33] = x[33]; pv[34] = x[34]; pv[35] = x[35]; 125049b5e25fSSatish Balay pv += 36; 125149b5e25fSSatish Balay } 125249b5e25fSSatish Balay /* invert diagonal block */ 125349b5e25fSSatish Balay w = ba + 36*diag_offset[i]; 125449b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_6(w);CHKERRQ(ierr); 125549b5e25fSSatish Balay } 125649b5e25fSSatish Balay 125749b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 125849b5e25fSSatish Balay C->factor = FACTOR_LU; 125949b5e25fSSatish Balay C->assembled = PETSC_TRUE; 126049b5e25fSSatish Balay PLogFlops(1.3333*216*b->mbs); /* from inverting diagonal blocks */ 126149b5e25fSSatish Balay PetscFunctionReturn(0); 126249b5e25fSSatish Balay } 126349b5e25fSSatish Balay 126449b5e25fSSatish Balay /* ------------------------------------------------------------*/ 126549b5e25fSSatish Balay /* 126649b5e25fSSatish Balay Version for when blocks are 5 by 5 126749b5e25fSSatish Balay */ 126849b5e25fSSatish Balay #undef __FUNC__ 12696f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5" 12706f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5(Mat A,Mat *B) 127149b5e25fSSatish Balay { 127249b5e25fSSatish Balay Mat C = *B; 127349b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 127449b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 127549b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 127649b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 127749b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 127849b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 127949b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 128049b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 128149b5e25fSSatish Balay MatScalar x17,x18,x19,x20,x21,x22,x23,x24,x25,p10,p11,p12,p13,p14; 128249b5e25fSSatish Balay MatScalar p15,p16,p17,p18,p19,p20,p21,p22,p23,p24,p25,m10,m11,m12; 128349b5e25fSSatish Balay MatScalar m13,m14,m15,m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 128449b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 128549b5e25fSSatish Balay 128649b5e25fSSatish Balay PetscFunctionBegin; 128749b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 128849b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 128949b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 129049b5e25fSSatish Balay 129149b5e25fSSatish Balay for (i=0; i<n; i++) { 129249b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 129349b5e25fSSatish Balay ajtmp = bj + bi[i]; 129449b5e25fSSatish Balay for (j=0; j<nz; j++) { 129549b5e25fSSatish Balay x = rtmp+25*ajtmp[j]; 129649b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 129749b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = x[16] = x[17] = 0.0; 129849b5e25fSSatish Balay x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0; 129949b5e25fSSatish Balay } 130049b5e25fSSatish Balay /* load in initial (unfactored row) */ 130149b5e25fSSatish Balay idx = r[i]; 130249b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 130349b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 130449b5e25fSSatish Balay v = aa + 25*ai[idx]; 130549b5e25fSSatish Balay for (j=0; j<nz; j++) { 130649b5e25fSSatish Balay x = rtmp+25*ic[ajtmpold[j]]; 130749b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 130849b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 130949b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 131049b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17]; 131149b5e25fSSatish Balay x[18] = v[18]; x[19] = v[19]; x[20] = v[20]; x[21] = v[21]; 131249b5e25fSSatish Balay x[22] = v[22]; x[23] = v[23]; x[24] = v[24]; 131349b5e25fSSatish Balay v += 25; 131449b5e25fSSatish Balay } 131549b5e25fSSatish Balay row = *ajtmp++; 131649b5e25fSSatish Balay while (row < i) { 131749b5e25fSSatish Balay pc = rtmp + 25*row; 131849b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 131949b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 132049b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 132149b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17]; p19 = pc[18]; 132249b5e25fSSatish Balay p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; p24 = pc[23]; 132349b5e25fSSatish Balay p25 = pc[24]; 132449b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 132549b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 132649b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 132749b5e25fSSatish Balay || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || 132849b5e25fSSatish Balay p20 != 0.0 || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || 132949b5e25fSSatish Balay p24 != 0.0 || p25 != 0.0) { 133049b5e25fSSatish Balay pv = ba + 25*diag_offset[row]; 133149b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 133249b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 133349b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 133449b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 133549b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; 133649b5e25fSSatish Balay x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; 133749b5e25fSSatish Balay x23 = pv[22]; x24 = pv[23]; x25 = pv[24]; 133849b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p6*x2 + p11*x3 + p16*x4 + p21*x5; 133949b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p7*x2 + p12*x3 + p17*x4 + p22*x5; 134049b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p8*x2 + p13*x3 + p18*x4 + p23*x5; 134149b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p9*x2 + p14*x3 + p19*x4 + p24*x5; 134249b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5; 134349b5e25fSSatish Balay 134449b5e25fSSatish Balay pc[5] = m6 = p1*x6 + p6*x7 + p11*x8 + p16*x9 + p21*x10; 134549b5e25fSSatish Balay pc[6] = m7 = p2*x6 + p7*x7 + p12*x8 + p17*x9 + p22*x10; 134649b5e25fSSatish Balay pc[7] = m8 = p3*x6 + p8*x7 + p13*x8 + p18*x9 + p23*x10; 134749b5e25fSSatish Balay pc[8] = m9 = p4*x6 + p9*x7 + p14*x8 + p19*x9 + p24*x10; 134849b5e25fSSatish Balay pc[9] = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10; 134949b5e25fSSatish Balay 135049b5e25fSSatish Balay pc[10] = m11 = p1*x11 + p6*x12 + p11*x13 + p16*x14 + p21*x15; 135149b5e25fSSatish Balay pc[11] = m12 = p2*x11 + p7*x12 + p12*x13 + p17*x14 + p22*x15; 135249b5e25fSSatish Balay pc[12] = m13 = p3*x11 + p8*x12 + p13*x13 + p18*x14 + p23*x15; 135349b5e25fSSatish Balay pc[13] = m14 = p4*x11 + p9*x12 + p14*x13 + p19*x14 + p24*x15; 135449b5e25fSSatish Balay pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15; 135549b5e25fSSatish Balay 135649b5e25fSSatish Balay pc[15] = m16 = p1*x16 + p6*x17 + p11*x18 + p16*x19 + p21*x20; 135749b5e25fSSatish Balay pc[16] = m17 = p2*x16 + p7*x17 + p12*x18 + p17*x19 + p22*x20; 135849b5e25fSSatish Balay pc[17] = m18 = p3*x16 + p8*x17 + p13*x18 + p18*x19 + p23*x20; 135949b5e25fSSatish Balay pc[18] = m19 = p4*x16 + p9*x17 + p14*x18 + p19*x19 + p24*x20; 136049b5e25fSSatish Balay pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20; 136149b5e25fSSatish Balay 136249b5e25fSSatish Balay pc[20] = m21 = p1*x21 + p6*x22 + p11*x23 + p16*x24 + p21*x25; 136349b5e25fSSatish Balay pc[21] = m22 = p2*x21 + p7*x22 + p12*x23 + p17*x24 + p22*x25; 136449b5e25fSSatish Balay pc[22] = m23 = p3*x21 + p8*x22 + p13*x23 + p18*x24 + p23*x25; 136549b5e25fSSatish Balay pc[23] = m24 = p4*x21 + p9*x22 + p14*x23 + p19*x24 + p24*x25; 136649b5e25fSSatish Balay pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25; 136749b5e25fSSatish Balay 136849b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 136949b5e25fSSatish Balay pv += 25; 137049b5e25fSSatish Balay for (j=0; j<nz; j++) { 137149b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 137249b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 137349b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 137449b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; 137549b5e25fSSatish Balay x18 = pv[17]; x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; 137649b5e25fSSatish Balay x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; x25 = pv[24]; 137749b5e25fSSatish Balay x = rtmp + 25*pj[j]; 137849b5e25fSSatish Balay x[0] -= m1*x1 + m6*x2 + m11*x3 + m16*x4 + m21*x5; 137949b5e25fSSatish Balay x[1] -= m2*x1 + m7*x2 + m12*x3 + m17*x4 + m22*x5; 138049b5e25fSSatish Balay x[2] -= m3*x1 + m8*x2 + m13*x3 + m18*x4 + m23*x5; 138149b5e25fSSatish Balay x[3] -= m4*x1 + m9*x2 + m14*x3 + m19*x4 + m24*x5; 138249b5e25fSSatish Balay x[4] -= m5*x1 + m10*x2 + m15*x3 + m20*x4 + m25*x5; 138349b5e25fSSatish Balay 138449b5e25fSSatish Balay x[5] -= m1*x6 + m6*x7 + m11*x8 + m16*x9 + m21*x10; 138549b5e25fSSatish Balay x[6] -= m2*x6 + m7*x7 + m12*x8 + m17*x9 + m22*x10; 138649b5e25fSSatish Balay x[7] -= m3*x6 + m8*x7 + m13*x8 + m18*x9 + m23*x10; 138749b5e25fSSatish Balay x[8] -= m4*x6 + m9*x7 + m14*x8 + m19*x9 + m24*x10; 138849b5e25fSSatish Balay x[9] -= m5*x6 + m10*x7 + m15*x8 + m20*x9 + m25*x10; 138949b5e25fSSatish Balay 139049b5e25fSSatish Balay x[10] -= m1*x11 + m6*x12 + m11*x13 + m16*x14 + m21*x15; 139149b5e25fSSatish Balay x[11] -= m2*x11 + m7*x12 + m12*x13 + m17*x14 + m22*x15; 139249b5e25fSSatish Balay x[12] -= m3*x11 + m8*x12 + m13*x13 + m18*x14 + m23*x15; 139349b5e25fSSatish Balay x[13] -= m4*x11 + m9*x12 + m14*x13 + m19*x14 + m24*x15; 139449b5e25fSSatish Balay x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15; 139549b5e25fSSatish Balay 139649b5e25fSSatish Balay x[15] -= m1*x16 + m6*x17 + m11*x18 + m16*x19 + m21*x20; 139749b5e25fSSatish Balay x[16] -= m2*x16 + m7*x17 + m12*x18 + m17*x19 + m22*x20; 139849b5e25fSSatish Balay x[17] -= m3*x16 + m8*x17 + m13*x18 + m18*x19 + m23*x20; 139949b5e25fSSatish Balay x[18] -= m4*x16 + m9*x17 + m14*x18 + m19*x19 + m24*x20; 140049b5e25fSSatish Balay x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20; 140149b5e25fSSatish Balay 140249b5e25fSSatish Balay x[20] -= m1*x21 + m6*x22 + m11*x23 + m16*x24 + m21*x25; 140349b5e25fSSatish Balay x[21] -= m2*x21 + m7*x22 + m12*x23 + m17*x24 + m22*x25; 140449b5e25fSSatish Balay x[22] -= m3*x21 + m8*x22 + m13*x23 + m18*x24 + m23*x25; 140549b5e25fSSatish Balay x[23] -= m4*x21 + m9*x22 + m14*x23 + m19*x24 + m24*x25; 140649b5e25fSSatish Balay x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25; 140749b5e25fSSatish Balay 140849b5e25fSSatish Balay pv += 25; 140949b5e25fSSatish Balay } 141049b5e25fSSatish Balay PLogFlops(250*nz+225); 141149b5e25fSSatish Balay } 141249b5e25fSSatish Balay row = *ajtmp++; 141349b5e25fSSatish Balay } 141449b5e25fSSatish Balay /* finished row so stick it into b->a */ 141549b5e25fSSatish Balay pv = ba + 25*bi[i]; 141649b5e25fSSatish Balay pj = bj + bi[i]; 141749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 141849b5e25fSSatish Balay for (j=0; j<nz; j++) { 141949b5e25fSSatish Balay x = rtmp+25*pj[j]; 142049b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 142149b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 142249b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 142349b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16]; 142449b5e25fSSatish Balay pv[17] = x[17]; pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20]; 142549b5e25fSSatish Balay pv[21] = x[21]; pv[22] = x[22]; pv[23] = x[23]; pv[24] = x[24]; 142649b5e25fSSatish Balay pv += 25; 142749b5e25fSSatish Balay } 142849b5e25fSSatish Balay /* invert diagonal block */ 142949b5e25fSSatish Balay w = ba + 25*diag_offset[i]; 143049b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr); 143149b5e25fSSatish Balay } 143249b5e25fSSatish Balay 143349b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 143449b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 143549b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 143649b5e25fSSatish Balay C->factor = FACTOR_LU; 143749b5e25fSSatish Balay C->assembled = PETSC_TRUE; 143849b5e25fSSatish Balay PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */ 143949b5e25fSSatish Balay PetscFunctionReturn(0); 144049b5e25fSSatish Balay } 144149b5e25fSSatish Balay /* 144249b5e25fSSatish Balay Version for when blocks are 5 by 5 Using natural ordering 144349b5e25fSSatish Balay */ 144449b5e25fSSatish Balay #undef __FUNC__ 14456f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering" 14466f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat A,Mat *B) 144749b5e25fSSatish Balay { 144849b5e25fSSatish Balay Mat C = *B; 144949b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 145049b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 145149b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 145249b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 145349b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 145449b5e25fSSatish Balay MatScalar x1,x2,x3,x4,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15; 145549b5e25fSSatish Balay MatScalar x16,x17,x18,x19,x20,x21,x22,x23,x24,x25; 145649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,p5,p6,p7,p8,p9,p10,p11,p12,p13,p14,p15; 145749b5e25fSSatish Balay MatScalar p16,p17,p18,p19,p20,p21,p22,p23,p24,p25; 145849b5e25fSSatish Balay MatScalar m1,m2,m3,m4,m5,m6,m7,m8,m9,m10,m11,m12,m13,m14,m15; 145949b5e25fSSatish Balay MatScalar m16,m17,m18,m19,m20,m21,m22,m23,m24,m25; 146049b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 146149b5e25fSSatish Balay 146249b5e25fSSatish Balay PetscFunctionBegin; 146349b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(25*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 146449b5e25fSSatish Balay for (i=0; i<n; i++) { 146549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 146649b5e25fSSatish Balay ajtmp = bj + bi[i]; 146749b5e25fSSatish Balay for (j=0; j<nz; j++) { 146849b5e25fSSatish Balay x = rtmp+25*ajtmp[j]; 146949b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 147049b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 147149b5e25fSSatish Balay x[16] = x[17] = x[18] = x[19] = x[20] = x[21] = x[22] = x[23] = x[24] = 0.0; 147249b5e25fSSatish Balay } 147349b5e25fSSatish Balay /* load in initial (unfactored row) */ 147449b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 147549b5e25fSSatish Balay ajtmpold = aj + ai[i]; 147649b5e25fSSatish Balay v = aa + 25*ai[i]; 147749b5e25fSSatish Balay for (j=0; j<nz; j++) { 147849b5e25fSSatish Balay x = rtmp+25*ajtmpold[j]; 147949b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 148049b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 148149b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 148249b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; x[16] = v[16]; x[17] = v[17]; x[18] = v[18]; 148349b5e25fSSatish Balay x[19] = v[19]; x[20] = v[20]; x[21] = v[21]; x[22] = v[22]; x[23] = v[23]; 148449b5e25fSSatish Balay x[24] = v[24]; 148549b5e25fSSatish Balay v += 25; 148649b5e25fSSatish Balay } 148749b5e25fSSatish Balay row = *ajtmp++; 148849b5e25fSSatish Balay while (row < i) { 148949b5e25fSSatish Balay pc = rtmp + 25*row; 149049b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 149149b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 149249b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 149349b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; p17 = pc[16]; p18 = pc[17]; 149449b5e25fSSatish Balay p19 = pc[18]; p20 = pc[19]; p21 = pc[20]; p22 = pc[21]; p23 = pc[22]; 149549b5e25fSSatish Balay p24 = pc[23]; p25 = pc[24]; 149649b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 149749b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 149849b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 149949b5e25fSSatish Balay || p16 != 0.0 || p17 != 0.0 || p18 != 0.0 || p19 != 0.0 || p20 != 0.0 150049b5e25fSSatish Balay || p21 != 0.0 || p22 != 0.0 || p23 != 0.0 || p24 != 0.0 || p25 != 0.0) { 150149b5e25fSSatish Balay pv = ba + 25*diag_offset[row]; 150249b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 150349b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 150449b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 150549b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 150649b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; x19 = pv[18]; 150749b5e25fSSatish Balay x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; x24 = pv[23]; 150849b5e25fSSatish Balay x25 = pv[24]; 150949b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p6*x2 + p11*x3 + p16*x4 + p21*x5; 151049b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p7*x2 + p12*x3 + p17*x4 + p22*x5; 151149b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p8*x2 + p13*x3 + p18*x4 + p23*x5; 151249b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p9*x2 + p14*x3 + p19*x4 + p24*x5; 151349b5e25fSSatish Balay pc[4] = m5 = p5*x1 + p10*x2 + p15*x3 + p20*x4 + p25*x5; 151449b5e25fSSatish Balay 151549b5e25fSSatish Balay pc[5] = m6 = p1*x6 + p6*x7 + p11*x8 + p16*x9 + p21*x10; 151649b5e25fSSatish Balay pc[6] = m7 = p2*x6 + p7*x7 + p12*x8 + p17*x9 + p22*x10; 151749b5e25fSSatish Balay pc[7] = m8 = p3*x6 + p8*x7 + p13*x8 + p18*x9 + p23*x10; 151849b5e25fSSatish Balay pc[8] = m9 = p4*x6 + p9*x7 + p14*x8 + p19*x9 + p24*x10; 151949b5e25fSSatish Balay pc[9] = m10 = p5*x6 + p10*x7 + p15*x8 + p20*x9 + p25*x10; 152049b5e25fSSatish Balay 152149b5e25fSSatish Balay pc[10] = m11 = p1*x11 + p6*x12 + p11*x13 + p16*x14 + p21*x15; 152249b5e25fSSatish Balay pc[11] = m12 = p2*x11 + p7*x12 + p12*x13 + p17*x14 + p22*x15; 152349b5e25fSSatish Balay pc[12] = m13 = p3*x11 + p8*x12 + p13*x13 + p18*x14 + p23*x15; 152449b5e25fSSatish Balay pc[13] = m14 = p4*x11 + p9*x12 + p14*x13 + p19*x14 + p24*x15; 152549b5e25fSSatish Balay pc[14] = m15 = p5*x11 + p10*x12 + p15*x13 + p20*x14 + p25*x15; 152649b5e25fSSatish Balay 152749b5e25fSSatish Balay pc[15] = m16 = p1*x16 + p6*x17 + p11*x18 + p16*x19 + p21*x20; 152849b5e25fSSatish Balay pc[16] = m17 = p2*x16 + p7*x17 + p12*x18 + p17*x19 + p22*x20; 152949b5e25fSSatish Balay pc[17] = m18 = p3*x16 + p8*x17 + p13*x18 + p18*x19 + p23*x20; 153049b5e25fSSatish Balay pc[18] = m19 = p4*x16 + p9*x17 + p14*x18 + p19*x19 + p24*x20; 153149b5e25fSSatish Balay pc[19] = m20 = p5*x16 + p10*x17 + p15*x18 + p20*x19 + p25*x20; 153249b5e25fSSatish Balay 153349b5e25fSSatish Balay pc[20] = m21 = p1*x21 + p6*x22 + p11*x23 + p16*x24 + p21*x25; 153449b5e25fSSatish Balay pc[21] = m22 = p2*x21 + p7*x22 + p12*x23 + p17*x24 + p22*x25; 153549b5e25fSSatish Balay pc[22] = m23 = p3*x21 + p8*x22 + p13*x23 + p18*x24 + p23*x25; 153649b5e25fSSatish Balay pc[23] = m24 = p4*x21 + p9*x22 + p14*x23 + p19*x24 + p24*x25; 153749b5e25fSSatish Balay pc[24] = m25 = p5*x21 + p10*x22 + p15*x23 + p20*x24 + p25*x25; 153849b5e25fSSatish Balay 153949b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 154049b5e25fSSatish Balay pv += 25; 154149b5e25fSSatish Balay for (j=0; j<nz; j++) { 154249b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 154349b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 154449b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 154549b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; x17 = pv[16]; x18 = pv[17]; 154649b5e25fSSatish Balay x19 = pv[18]; x20 = pv[19]; x21 = pv[20]; x22 = pv[21]; x23 = pv[22]; 154749b5e25fSSatish Balay x24 = pv[23]; x25 = pv[24]; 154849b5e25fSSatish Balay x = rtmp + 25*pj[j]; 154949b5e25fSSatish Balay x[0] -= m1*x1 + m6*x2 + m11*x3 + m16*x4 + m21*x5; 155049b5e25fSSatish Balay x[1] -= m2*x1 + m7*x2 + m12*x3 + m17*x4 + m22*x5; 155149b5e25fSSatish Balay x[2] -= m3*x1 + m8*x2 + m13*x3 + m18*x4 + m23*x5; 155249b5e25fSSatish Balay x[3] -= m4*x1 + m9*x2 + m14*x3 + m19*x4 + m24*x5; 155349b5e25fSSatish Balay x[4] -= m5*x1 + m10*x2 + m15*x3 + m20*x4 + m25*x5; 155449b5e25fSSatish Balay 155549b5e25fSSatish Balay x[5] -= m1*x6 + m6*x7 + m11*x8 + m16*x9 + m21*x10; 155649b5e25fSSatish Balay x[6] -= m2*x6 + m7*x7 + m12*x8 + m17*x9 + m22*x10; 155749b5e25fSSatish Balay x[7] -= m3*x6 + m8*x7 + m13*x8 + m18*x9 + m23*x10; 155849b5e25fSSatish Balay x[8] -= m4*x6 + m9*x7 + m14*x8 + m19*x9 + m24*x10; 155949b5e25fSSatish Balay x[9] -= m5*x6 + m10*x7 + m15*x8 + m20*x9 + m25*x10; 156049b5e25fSSatish Balay 156149b5e25fSSatish Balay x[10] -= m1*x11 + m6*x12 + m11*x13 + m16*x14 + m21*x15; 156249b5e25fSSatish Balay x[11] -= m2*x11 + m7*x12 + m12*x13 + m17*x14 + m22*x15; 156349b5e25fSSatish Balay x[12] -= m3*x11 + m8*x12 + m13*x13 + m18*x14 + m23*x15; 156449b5e25fSSatish Balay x[13] -= m4*x11 + m9*x12 + m14*x13 + m19*x14 + m24*x15; 156549b5e25fSSatish Balay x[14] -= m5*x11 + m10*x12 + m15*x13 + m20*x14 + m25*x15; 156649b5e25fSSatish Balay 156749b5e25fSSatish Balay x[15] -= m1*x16 + m6*x17 + m11*x18 + m16*x19 + m21*x20; 156849b5e25fSSatish Balay x[16] -= m2*x16 + m7*x17 + m12*x18 + m17*x19 + m22*x20; 156949b5e25fSSatish Balay x[17] -= m3*x16 + m8*x17 + m13*x18 + m18*x19 + m23*x20; 157049b5e25fSSatish Balay x[18] -= m4*x16 + m9*x17 + m14*x18 + m19*x19 + m24*x20; 157149b5e25fSSatish Balay x[19] -= m5*x16 + m10*x17 + m15*x18 + m20*x19 + m25*x20; 157249b5e25fSSatish Balay 157349b5e25fSSatish Balay x[20] -= m1*x21 + m6*x22 + m11*x23 + m16*x24 + m21*x25; 157449b5e25fSSatish Balay x[21] -= m2*x21 + m7*x22 + m12*x23 + m17*x24 + m22*x25; 157549b5e25fSSatish Balay x[22] -= m3*x21 + m8*x22 + m13*x23 + m18*x24 + m23*x25; 157649b5e25fSSatish Balay x[23] -= m4*x21 + m9*x22 + m14*x23 + m19*x24 + m24*x25; 157749b5e25fSSatish Balay x[24] -= m5*x21 + m10*x22 + m15*x23 + m20*x24 + m25*x25; 157849b5e25fSSatish Balay pv += 25; 157949b5e25fSSatish Balay } 158049b5e25fSSatish Balay PLogFlops(250*nz+225); 158149b5e25fSSatish Balay } 158249b5e25fSSatish Balay row = *ajtmp++; 158349b5e25fSSatish Balay } 158449b5e25fSSatish Balay /* finished row so stick it into b->a */ 158549b5e25fSSatish Balay pv = ba + 25*bi[i]; 158649b5e25fSSatish Balay pj = bj + bi[i]; 158749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 158849b5e25fSSatish Balay for (j=0; j<nz; j++) { 158949b5e25fSSatish Balay x = rtmp+25*pj[j]; 159049b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 159149b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 159249b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 159349b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; pv[16] = x[16]; pv[17] = x[17]; 159449b5e25fSSatish Balay pv[18] = x[18]; pv[19] = x[19]; pv[20] = x[20]; pv[21] = x[21]; pv[22] = x[22]; 159549b5e25fSSatish Balay pv[23] = x[23]; pv[24] = x[24]; 159649b5e25fSSatish Balay pv += 25; 159749b5e25fSSatish Balay } 159849b5e25fSSatish Balay /* invert diagonal block */ 159949b5e25fSSatish Balay w = ba + 25*diag_offset[i]; 160049b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_5(w);CHKERRQ(ierr); 160149b5e25fSSatish Balay } 160249b5e25fSSatish Balay 160349b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 160449b5e25fSSatish Balay C->factor = FACTOR_LU; 160549b5e25fSSatish Balay C->assembled = PETSC_TRUE; 160649b5e25fSSatish Balay PLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */ 160749b5e25fSSatish Balay PetscFunctionReturn(0); 160849b5e25fSSatish Balay } 160949b5e25fSSatish Balay 161049b5e25fSSatish Balay /* ------------------------------------------------------------*/ 161149b5e25fSSatish Balay /* 161249b5e25fSSatish Balay Version for when blocks are 4 by 4 161349b5e25fSSatish Balay */ 161449b5e25fSSatish Balay #undef __FUNC__ 16156f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4" 16166f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat A,Mat *B) 161749b5e25fSSatish Balay { 161849b5e25fSSatish Balay Mat C = *B; 161949b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 162049b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 162149b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 162249b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 162349b5e25fSSatish Balay int *diag_offset = b->diag,idx,*ai=a->i,*aj=a->j,*pj; 162449b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 162549b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 162649b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 162749b5e25fSSatish Balay MatScalar p10,p11,p12,p13,p14,p15,p16,m10,m11,m12; 162849b5e25fSSatish Balay MatScalar m13,m14,m15,m16; 162949b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 163049b5e25fSSatish Balay 163149b5e25fSSatish Balay PetscFunctionBegin; 163249b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 163349b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 163449b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(16*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 163549b5e25fSSatish Balay 163649b5e25fSSatish Balay for (i=0; i<n; i++) { 163749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 163849b5e25fSSatish Balay ajtmp = bj + bi[i]; 163949b5e25fSSatish Balay for (j=0; j<nz; j++) { 164049b5e25fSSatish Balay x = rtmp+16*ajtmp[j]; 164149b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 164249b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 164349b5e25fSSatish Balay } 164449b5e25fSSatish Balay /* load in initial (unfactored row) */ 164549b5e25fSSatish Balay idx = r[i]; 164649b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 164749b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 164849b5e25fSSatish Balay v = aa + 16*ai[idx]; 164949b5e25fSSatish Balay for (j=0; j<nz; j++) { 165049b5e25fSSatish Balay x = rtmp+16*ic[ajtmpold[j]]; 165149b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 165249b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 165349b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 165449b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; 165549b5e25fSSatish Balay v += 16; 165649b5e25fSSatish Balay } 165749b5e25fSSatish Balay row = *ajtmp++; 165849b5e25fSSatish Balay while (row < i) { 165949b5e25fSSatish Balay pc = rtmp + 16*row; 166049b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 166149b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 166249b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 166349b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; 166449b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 166549b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 166649b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 166749b5e25fSSatish Balay || p16 != 0.0) { 166849b5e25fSSatish Balay pv = ba + 16*diag_offset[row]; 166949b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 167049b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 167149b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 167249b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 167349b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; 167449b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p5*x2 + p9*x3 + p13*x4; 167549b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p6*x2 + p10*x3 + p14*x4; 167649b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p7*x2 + p11*x3 + p15*x4; 167749b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p8*x2 + p12*x3 + p16*x4; 167849b5e25fSSatish Balay 167949b5e25fSSatish Balay pc[4] = m5 = p1*x5 + p5*x6 + p9*x7 + p13*x8; 168049b5e25fSSatish Balay pc[5] = m6 = p2*x5 + p6*x6 + p10*x7 + p14*x8; 168149b5e25fSSatish Balay pc[6] = m7 = p3*x5 + p7*x6 + p11*x7 + p15*x8; 168249b5e25fSSatish Balay pc[7] = m8 = p4*x5 + p8*x6 + p12*x7 + p16*x8; 168349b5e25fSSatish Balay 168449b5e25fSSatish Balay pc[8] = m9 = p1*x9 + p5*x10 + p9*x11 + p13*x12; 168549b5e25fSSatish Balay pc[9] = m10 = p2*x9 + p6*x10 + p10*x11 + p14*x12; 168649b5e25fSSatish Balay pc[10] = m11 = p3*x9 + p7*x10 + p11*x11 + p15*x12; 168749b5e25fSSatish Balay pc[11] = m12 = p4*x9 + p8*x10 + p12*x11 + p16*x12; 168849b5e25fSSatish Balay 168949b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p5*x14 + p9*x15 + p13*x16; 169049b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p6*x14 + p10*x15 + p14*x16; 169149b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p7*x14 + p11*x15 + p15*x16; 169249b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p8*x14 + p12*x15 + p16*x16; 169349b5e25fSSatish Balay 169449b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 169549b5e25fSSatish Balay pv += 16; 169649b5e25fSSatish Balay for (j=0; j<nz; j++) { 169749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 169849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 169949b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 170049b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 170149b5e25fSSatish Balay x = rtmp + 16*pj[j]; 170249b5e25fSSatish Balay x[0] -= m1*x1 + m5*x2 + m9*x3 + m13*x4; 170349b5e25fSSatish Balay x[1] -= m2*x1 + m6*x2 + m10*x3 + m14*x4; 170449b5e25fSSatish Balay x[2] -= m3*x1 + m7*x2 + m11*x3 + m15*x4; 170549b5e25fSSatish Balay x[3] -= m4*x1 + m8*x2 + m12*x3 + m16*x4; 170649b5e25fSSatish Balay 170749b5e25fSSatish Balay x[4] -= m1*x5 + m5*x6 + m9*x7 + m13*x8; 170849b5e25fSSatish Balay x[5] -= m2*x5 + m6*x6 + m10*x7 + m14*x8; 170949b5e25fSSatish Balay x[6] -= m3*x5 + m7*x6 + m11*x7 + m15*x8; 171049b5e25fSSatish Balay x[7] -= m4*x5 + m8*x6 + m12*x7 + m16*x8; 171149b5e25fSSatish Balay 171249b5e25fSSatish Balay x[8] -= m1*x9 + m5*x10 + m9*x11 + m13*x12; 171349b5e25fSSatish Balay x[9] -= m2*x9 + m6*x10 + m10*x11 + m14*x12; 171449b5e25fSSatish Balay x[10] -= m3*x9 + m7*x10 + m11*x11 + m15*x12; 171549b5e25fSSatish Balay x[11] -= m4*x9 + m8*x10 + m12*x11 + m16*x12; 171649b5e25fSSatish Balay 171749b5e25fSSatish Balay x[12] -= m1*x13 + m5*x14 + m9*x15 + m13*x16; 171849b5e25fSSatish Balay x[13] -= m2*x13 + m6*x14 + m10*x15 + m14*x16; 171949b5e25fSSatish Balay x[14] -= m3*x13 + m7*x14 + m11*x15 + m15*x16; 172049b5e25fSSatish Balay x[15] -= m4*x13 + m8*x14 + m12*x15 + m16*x16; 172149b5e25fSSatish Balay 172249b5e25fSSatish Balay pv += 16; 172349b5e25fSSatish Balay } 172449b5e25fSSatish Balay PLogFlops(128*nz+112); 172549b5e25fSSatish Balay } 172649b5e25fSSatish Balay row = *ajtmp++; 172749b5e25fSSatish Balay } 172849b5e25fSSatish Balay /* finished row so stick it into b->a */ 172949b5e25fSSatish Balay pv = ba + 16*bi[i]; 173049b5e25fSSatish Balay pj = bj + bi[i]; 173149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 173249b5e25fSSatish Balay for (j=0; j<nz; j++) { 173349b5e25fSSatish Balay x = rtmp+16*pj[j]; 173449b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 173549b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 173649b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 173749b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 173849b5e25fSSatish Balay pv += 16; 173949b5e25fSSatish Balay } 174049b5e25fSSatish Balay /* invert diagonal block */ 174149b5e25fSSatish Balay w = ba + 16*diag_offset[i]; 174249b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_4(w);CHKERRQ(ierr); 174349b5e25fSSatish Balay } 174449b5e25fSSatish Balay 174549b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 174649b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 174749b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 174849b5e25fSSatish Balay C->factor = FACTOR_LU; 174949b5e25fSSatish Balay C->assembled = PETSC_TRUE; 175049b5e25fSSatish Balay PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */ 175149b5e25fSSatish Balay PetscFunctionReturn(0); 175249b5e25fSSatish Balay } 175349b5e25fSSatish Balay /* 175449b5e25fSSatish Balay Version for when blocks are 4 by 4 Using natural ordering 175549b5e25fSSatish Balay */ 175649b5e25fSSatish Balay #undef __FUNC__ 17576f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering" 17586f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_4_NaturalOrdering(Mat A,Mat *B) 175949b5e25fSSatish Balay { 176049b5e25fSSatish Balay Mat C = *B; 176149b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 176249b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 176349b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 176449b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 176549b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 176649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 176749b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9,x10,x11,x12,x13,x14,x15,x16; 176849b5e25fSSatish Balay MatScalar p10,p11,p12,p13,p14,p15,p16,m10,m11,m12; 176949b5e25fSSatish Balay MatScalar m13,m14,m15,m16; 177049b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 177149b5e25fSSatish Balay 177249b5e25fSSatish Balay PetscFunctionBegin; 177349b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(16*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 177449b5e25fSSatish Balay 177549b5e25fSSatish Balay for (i=0; i<n; i++) { 177649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 177749b5e25fSSatish Balay ajtmp = bj + bi[i]; 177849b5e25fSSatish Balay for (j=0; j<nz; j++) { 177949b5e25fSSatish Balay x = rtmp+16*ajtmp[j]; 178049b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = x[9] = 0.0; 178149b5e25fSSatish Balay x[10] = x[11] = x[12] = x[13] = x[14] = x[15] = 0.0; 178249b5e25fSSatish Balay } 178349b5e25fSSatish Balay /* load in initial (unfactored row) */ 178449b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 178549b5e25fSSatish Balay ajtmpold = aj + ai[i]; 178649b5e25fSSatish Balay v = aa + 16*ai[i]; 178749b5e25fSSatish Balay for (j=0; j<nz; j++) { 178849b5e25fSSatish Balay x = rtmp+16*ajtmpold[j]; 178949b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 179049b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 179149b5e25fSSatish Balay x[9] = v[9]; x[10] = v[10]; x[11] = v[11]; x[12] = v[12]; x[13] = v[13]; 179249b5e25fSSatish Balay x[14] = v[14]; x[15] = v[15]; 179349b5e25fSSatish Balay v += 16; 179449b5e25fSSatish Balay } 179549b5e25fSSatish Balay row = *ajtmp++; 179649b5e25fSSatish Balay while (row < i) { 179749b5e25fSSatish Balay pc = rtmp + 16*row; 179849b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 179949b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 180049b5e25fSSatish Balay p10 = pc[9]; p11 = pc[10]; p12 = pc[11]; p13 = pc[12]; p14 = pc[13]; 180149b5e25fSSatish Balay p15 = pc[14]; p16 = pc[15]; 180249b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 180349b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0 || p10 != 0.0 || 180449b5e25fSSatish Balay p11 != 0.0 || p12 != 0.0 || p13 != 0.0 || p14 != 0.0 || p15 != 0.0 180549b5e25fSSatish Balay || p16 != 0.0) { 180649b5e25fSSatish Balay pv = ba + 16*diag_offset[row]; 180749b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 180849b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 180949b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 181049b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; x14 = pv[13]; 181149b5e25fSSatish Balay x15 = pv[14]; x16 = pv[15]; 181249b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p5*x2 + p9*x3 + p13*x4; 181349b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p6*x2 + p10*x3 + p14*x4; 181449b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p7*x2 + p11*x3 + p15*x4; 181549b5e25fSSatish Balay pc[3] = m4 = p4*x1 + p8*x2 + p12*x3 + p16*x4; 181649b5e25fSSatish Balay 181749b5e25fSSatish Balay pc[4] = m5 = p1*x5 + p5*x6 + p9*x7 + p13*x8; 181849b5e25fSSatish Balay pc[5] = m6 = p2*x5 + p6*x6 + p10*x7 + p14*x8; 181949b5e25fSSatish Balay pc[6] = m7 = p3*x5 + p7*x6 + p11*x7 + p15*x8; 182049b5e25fSSatish Balay pc[7] = m8 = p4*x5 + p8*x6 + p12*x7 + p16*x8; 182149b5e25fSSatish Balay 182249b5e25fSSatish Balay pc[8] = m9 = p1*x9 + p5*x10 + p9*x11 + p13*x12; 182349b5e25fSSatish Balay pc[9] = m10 = p2*x9 + p6*x10 + p10*x11 + p14*x12; 182449b5e25fSSatish Balay pc[10] = m11 = p3*x9 + p7*x10 + p11*x11 + p15*x12; 182549b5e25fSSatish Balay pc[11] = m12 = p4*x9 + p8*x10 + p12*x11 + p16*x12; 182649b5e25fSSatish Balay 182749b5e25fSSatish Balay pc[12] = m13 = p1*x13 + p5*x14 + p9*x15 + p13*x16; 182849b5e25fSSatish Balay pc[13] = m14 = p2*x13 + p6*x14 + p10*x15 + p14*x16; 182949b5e25fSSatish Balay pc[14] = m15 = p3*x13 + p7*x14 + p11*x15 + p15*x16; 183049b5e25fSSatish Balay pc[15] = m16 = p4*x13 + p8*x14 + p12*x15 + p16*x16; 183149b5e25fSSatish Balay 183249b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 183349b5e25fSSatish Balay pv += 16; 183449b5e25fSSatish Balay for (j=0; j<nz; j++) { 183549b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 183649b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 183749b5e25fSSatish Balay x10 = pv[9]; x11 = pv[10]; x12 = pv[11]; x13 = pv[12]; 183849b5e25fSSatish Balay x14 = pv[13]; x15 = pv[14]; x16 = pv[15]; 183949b5e25fSSatish Balay x = rtmp + 16*pj[j]; 184049b5e25fSSatish Balay x[0] -= m1*x1 + m5*x2 + m9*x3 + m13*x4; 184149b5e25fSSatish Balay x[1] -= m2*x1 + m6*x2 + m10*x3 + m14*x4; 184249b5e25fSSatish Balay x[2] -= m3*x1 + m7*x2 + m11*x3 + m15*x4; 184349b5e25fSSatish Balay x[3] -= m4*x1 + m8*x2 + m12*x3 + m16*x4; 184449b5e25fSSatish Balay 184549b5e25fSSatish Balay x[4] -= m1*x5 + m5*x6 + m9*x7 + m13*x8; 184649b5e25fSSatish Balay x[5] -= m2*x5 + m6*x6 + m10*x7 + m14*x8; 184749b5e25fSSatish Balay x[6] -= m3*x5 + m7*x6 + m11*x7 + m15*x8; 184849b5e25fSSatish Balay x[7] -= m4*x5 + m8*x6 + m12*x7 + m16*x8; 184949b5e25fSSatish Balay 185049b5e25fSSatish Balay x[8] -= m1*x9 + m5*x10 + m9*x11 + m13*x12; 185149b5e25fSSatish Balay x[9] -= m2*x9 + m6*x10 + m10*x11 + m14*x12; 185249b5e25fSSatish Balay x[10] -= m3*x9 + m7*x10 + m11*x11 + m15*x12; 185349b5e25fSSatish Balay x[11] -= m4*x9 + m8*x10 + m12*x11 + m16*x12; 185449b5e25fSSatish Balay 185549b5e25fSSatish Balay x[12] -= m1*x13 + m5*x14 + m9*x15 + m13*x16; 185649b5e25fSSatish Balay x[13] -= m2*x13 + m6*x14 + m10*x15 + m14*x16; 185749b5e25fSSatish Balay x[14] -= m3*x13 + m7*x14 + m11*x15 + m15*x16; 185849b5e25fSSatish Balay x[15] -= m4*x13 + m8*x14 + m12*x15 + m16*x16; 185949b5e25fSSatish Balay 186049b5e25fSSatish Balay pv += 16; 186149b5e25fSSatish Balay } 186249b5e25fSSatish Balay PLogFlops(128*nz+112); 186349b5e25fSSatish Balay } 186449b5e25fSSatish Balay row = *ajtmp++; 186549b5e25fSSatish Balay } 186649b5e25fSSatish Balay /* finished row so stick it into b->a */ 186749b5e25fSSatish Balay pv = ba + 16*bi[i]; 186849b5e25fSSatish Balay pj = bj + bi[i]; 186949b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 187049b5e25fSSatish Balay for (j=0; j<nz; j++) { 187149b5e25fSSatish Balay x = rtmp+16*pj[j]; 187249b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 187349b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 187449b5e25fSSatish Balay pv[9] = x[9]; pv[10] = x[10]; pv[11] = x[11]; pv[12] = x[12]; 187549b5e25fSSatish Balay pv[13] = x[13]; pv[14] = x[14]; pv[15] = x[15]; 187649b5e25fSSatish Balay pv += 16; 187749b5e25fSSatish Balay } 187849b5e25fSSatish Balay /* invert diagonal block */ 187949b5e25fSSatish Balay w = ba + 16*diag_offset[i]; 188049b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_4(w);CHKERRQ(ierr); 188149b5e25fSSatish Balay } 188249b5e25fSSatish Balay 188349b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 188449b5e25fSSatish Balay C->factor = FACTOR_LU; 188549b5e25fSSatish Balay C->assembled = PETSC_TRUE; 188649b5e25fSSatish Balay PLogFlops(1.3333*64*b->mbs); /* from inverting diagonal blocks */ 188749b5e25fSSatish Balay PetscFunctionReturn(0); 188849b5e25fSSatish Balay } 188949b5e25fSSatish Balay 189049b5e25fSSatish Balay 189149b5e25fSSatish Balay /* ------------------------------------------------------------*/ 189249b5e25fSSatish Balay /* 189349b5e25fSSatish Balay Version for when blocks are 3 by 3 189449b5e25fSSatish Balay */ 189549b5e25fSSatish Balay #undef __FUNC__ 18966f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3" 18976f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3(Mat A,Mat *B) 189849b5e25fSSatish Balay { 189949b5e25fSSatish Balay Mat C = *B; 190049b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 190149b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 190249b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 190349b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row,*ai=a->i,*aj=a->j; 190449b5e25fSSatish Balay int *diag_offset = b->diag,idx,*pj; 190549b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 190649b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 190749b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9; 190849b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 190949b5e25fSSatish Balay 191049b5e25fSSatish Balay PetscFunctionBegin; 191149b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 191249b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 191349b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(9*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 191449b5e25fSSatish Balay 191549b5e25fSSatish Balay for (i=0; i<n; i++) { 191649b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 191749b5e25fSSatish Balay ajtmp = bj + bi[i]; 191849b5e25fSSatish Balay for (j=0; j<nz; j++) { 191949b5e25fSSatish Balay x = rtmp + 9*ajtmp[j]; 192049b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = 0.0; 192149b5e25fSSatish Balay } 192249b5e25fSSatish Balay /* load in initial (unfactored row) */ 192349b5e25fSSatish Balay idx = r[i]; 192449b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 192549b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 192649b5e25fSSatish Balay v = aa + 9*ai[idx]; 192749b5e25fSSatish Balay for (j=0; j<nz; j++) { 192849b5e25fSSatish Balay x = rtmp + 9*ic[ajtmpold[j]]; 192949b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 193049b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 193149b5e25fSSatish Balay v += 9; 193249b5e25fSSatish Balay } 193349b5e25fSSatish Balay row = *ajtmp++; 193449b5e25fSSatish Balay while (row < i) { 193549b5e25fSSatish Balay pc = rtmp + 9*row; 193649b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 193749b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 193849b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 193949b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0) { 194049b5e25fSSatish Balay pv = ba + 9*diag_offset[row]; 194149b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 194249b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 194349b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 194449b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p4*x2 + p7*x3; 194549b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p5*x2 + p8*x3; 194649b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p6*x2 + p9*x3; 194749b5e25fSSatish Balay 194849b5e25fSSatish Balay pc[3] = m4 = p1*x4 + p4*x5 + p7*x6; 194949b5e25fSSatish Balay pc[4] = m5 = p2*x4 + p5*x5 + p8*x6; 195049b5e25fSSatish Balay pc[5] = m6 = p3*x4 + p6*x5 + p9*x6; 195149b5e25fSSatish Balay 195249b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p4*x8 + p7*x9; 195349b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p5*x8 + p8*x9; 195449b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p6*x8 + p9*x9; 195549b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 195649b5e25fSSatish Balay pv += 9; 195749b5e25fSSatish Balay for (j=0; j<nz; j++) { 195849b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 195949b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 196049b5e25fSSatish Balay x = rtmp + 9*pj[j]; 196149b5e25fSSatish Balay x[0] -= m1*x1 + m4*x2 + m7*x3; 196249b5e25fSSatish Balay x[1] -= m2*x1 + m5*x2 + m8*x3; 196349b5e25fSSatish Balay x[2] -= m3*x1 + m6*x2 + m9*x3; 196449b5e25fSSatish Balay 196549b5e25fSSatish Balay x[3] -= m1*x4 + m4*x5 + m7*x6; 196649b5e25fSSatish Balay x[4] -= m2*x4 + m5*x5 + m8*x6; 196749b5e25fSSatish Balay x[5] -= m3*x4 + m6*x5 + m9*x6; 196849b5e25fSSatish Balay 196949b5e25fSSatish Balay x[6] -= m1*x7 + m4*x8 + m7*x9; 197049b5e25fSSatish Balay x[7] -= m2*x7 + m5*x8 + m8*x9; 197149b5e25fSSatish Balay x[8] -= m3*x7 + m6*x8 + m9*x9; 197249b5e25fSSatish Balay pv += 9; 197349b5e25fSSatish Balay } 197449b5e25fSSatish Balay PLogFlops(54*nz+36); 197549b5e25fSSatish Balay } 197649b5e25fSSatish Balay row = *ajtmp++; 197749b5e25fSSatish Balay } 197849b5e25fSSatish Balay /* finished row so stick it into b->a */ 197949b5e25fSSatish Balay pv = ba + 9*bi[i]; 198049b5e25fSSatish Balay pj = bj + bi[i]; 198149b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 198249b5e25fSSatish Balay for (j=0; j<nz; j++) { 198349b5e25fSSatish Balay x = rtmp + 9*pj[j]; 198449b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 198549b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 198649b5e25fSSatish Balay pv += 9; 198749b5e25fSSatish Balay } 198849b5e25fSSatish Balay /* invert diagonal block */ 198949b5e25fSSatish Balay w = ba + 9*diag_offset[i]; 199049b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_3(w);CHKERRQ(ierr); 199149b5e25fSSatish Balay } 199249b5e25fSSatish Balay 199349b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 199449b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 199549b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 199649b5e25fSSatish Balay C->factor = FACTOR_LU; 199749b5e25fSSatish Balay C->assembled = PETSC_TRUE; 199849b5e25fSSatish Balay PLogFlops(1.3333*27*b->mbs); /* from inverting diagonal blocks */ 199949b5e25fSSatish Balay PetscFunctionReturn(0); 200049b5e25fSSatish Balay } 200149b5e25fSSatish Balay /* 200249b5e25fSSatish Balay Version for when blocks are 3 by 3 Using natural ordering 200349b5e25fSSatish Balay */ 200449b5e25fSSatish Balay #undef __FUNC__ 20056f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering" 20066f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_3_NaturalOrdering(Mat A,Mat *B) 200749b5e25fSSatish Balay { 200849b5e25fSSatish Balay Mat C = *B; 200949b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 201049b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 201149b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 201249b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 201349b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 201449b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,m5,m6,m7,m8,m9,x1,x2,x3,x4; 201549b5e25fSSatish Balay MatScalar p5,p6,p7,p8,p9,x5,x6,x7,x8,x9; 201649b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 201749b5e25fSSatish Balay 201849b5e25fSSatish Balay PetscFunctionBegin; 201949b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(9*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 202049b5e25fSSatish Balay 202149b5e25fSSatish Balay for (i=0; i<n; i++) { 202249b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 202349b5e25fSSatish Balay ajtmp = bj + bi[i]; 202449b5e25fSSatish Balay for (j=0; j<nz; j++) { 202549b5e25fSSatish Balay x = rtmp+9*ajtmp[j]; 202649b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = x[4] = x[5] = x[6] = x[7] = x[8] = 0.0; 202749b5e25fSSatish Balay } 202849b5e25fSSatish Balay /* load in initial (unfactored row) */ 202949b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 203049b5e25fSSatish Balay ajtmpold = aj + ai[i]; 203149b5e25fSSatish Balay v = aa + 9*ai[i]; 203249b5e25fSSatish Balay for (j=0; j<nz; j++) { 203349b5e25fSSatish Balay x = rtmp+9*ajtmpold[j]; 203449b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 203549b5e25fSSatish Balay x[4] = v[4]; x[5] = v[5]; x[6] = v[6]; x[7] = v[7]; x[8] = v[8]; 203649b5e25fSSatish Balay v += 9; 203749b5e25fSSatish Balay } 203849b5e25fSSatish Balay row = *ajtmp++; 203949b5e25fSSatish Balay while (row < i) { 204049b5e25fSSatish Balay pc = rtmp + 9*row; 204149b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 204249b5e25fSSatish Balay p5 = pc[4]; p6 = pc[5]; p7 = pc[6]; p8 = pc[7]; p9 = pc[8]; 204349b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0 || p5 != 0.0 || 204449b5e25fSSatish Balay p6 != 0.0 || p7 != 0.0 || p8 != 0.0 || p9 != 0.0) { 204549b5e25fSSatish Balay pv = ba + 9*diag_offset[row]; 204649b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 204749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 204849b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 204949b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p4*x2 + p7*x3; 205049b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p5*x2 + p8*x3; 205149b5e25fSSatish Balay pc[2] = m3 = p3*x1 + p6*x2 + p9*x3; 205249b5e25fSSatish Balay 205349b5e25fSSatish Balay pc[3] = m4 = p1*x4 + p4*x5 + p7*x6; 205449b5e25fSSatish Balay pc[4] = m5 = p2*x4 + p5*x5 + p8*x6; 205549b5e25fSSatish Balay pc[5] = m6 = p3*x4 + p6*x5 + p9*x6; 205649b5e25fSSatish Balay 205749b5e25fSSatish Balay pc[6] = m7 = p1*x7 + p4*x8 + p7*x9; 205849b5e25fSSatish Balay pc[7] = m8 = p2*x7 + p5*x8 + p8*x9; 205949b5e25fSSatish Balay pc[8] = m9 = p3*x7 + p6*x8 + p9*x9; 206049b5e25fSSatish Balay 206149b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 206249b5e25fSSatish Balay pv += 9; 206349b5e25fSSatish Balay for (j=0; j<nz; j++) { 206449b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 206549b5e25fSSatish Balay x5 = pv[4]; x6 = pv[5]; x7 = pv[6]; x8 = pv[7]; x9 = pv[8]; 206649b5e25fSSatish Balay x = rtmp + 9*pj[j]; 206749b5e25fSSatish Balay x[0] -= m1*x1 + m4*x2 + m7*x3; 206849b5e25fSSatish Balay x[1] -= m2*x1 + m5*x2 + m8*x3; 206949b5e25fSSatish Balay x[2] -= m3*x1 + m6*x2 + m9*x3; 207049b5e25fSSatish Balay 207149b5e25fSSatish Balay x[3] -= m1*x4 + m4*x5 + m7*x6; 207249b5e25fSSatish Balay x[4] -= m2*x4 + m5*x5 + m8*x6; 207349b5e25fSSatish Balay x[5] -= m3*x4 + m6*x5 + m9*x6; 207449b5e25fSSatish Balay 207549b5e25fSSatish Balay x[6] -= m1*x7 + m4*x8 + m7*x9; 207649b5e25fSSatish Balay x[7] -= m2*x7 + m5*x8 + m8*x9; 207749b5e25fSSatish Balay x[8] -= m3*x7 + m6*x8 + m9*x9; 207849b5e25fSSatish Balay pv += 9; 207949b5e25fSSatish Balay } 208049b5e25fSSatish Balay PLogFlops(54*nz+36); 208149b5e25fSSatish Balay } 208249b5e25fSSatish Balay row = *ajtmp++; 208349b5e25fSSatish Balay } 208449b5e25fSSatish Balay /* finished row so stick it into b->a */ 208549b5e25fSSatish Balay pv = ba + 9*bi[i]; 208649b5e25fSSatish Balay pj = bj + bi[i]; 208749b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 208849b5e25fSSatish Balay for (j=0; j<nz; j++) { 208949b5e25fSSatish Balay x = rtmp+9*pj[j]; 209049b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 209149b5e25fSSatish Balay pv[4] = x[4]; pv[5] = x[5]; pv[6] = x[6]; pv[7] = x[7]; pv[8] = x[8]; 209249b5e25fSSatish Balay pv += 9; 209349b5e25fSSatish Balay } 209449b5e25fSSatish Balay /* invert diagonal block */ 209549b5e25fSSatish Balay w = ba + 9*diag_offset[i]; 209649b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_3(w);CHKERRQ(ierr); 209749b5e25fSSatish Balay } 209849b5e25fSSatish Balay 209949b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 210049b5e25fSSatish Balay C->factor = FACTOR_LU; 210149b5e25fSSatish Balay C->assembled = PETSC_TRUE; 210249b5e25fSSatish Balay PLogFlops(1.3333*27*b->mbs); /* from inverting diagonal blocks */ 210349b5e25fSSatish Balay PetscFunctionReturn(0); 210449b5e25fSSatish Balay } 210549b5e25fSSatish Balay 210649b5e25fSSatish Balay /* ------------------------------------------------------------*/ 210749b5e25fSSatish Balay /* 210849b5e25fSSatish Balay Version for when blocks are 2 by 2 210949b5e25fSSatish Balay */ 211049b5e25fSSatish Balay #undef __FUNC__ 21116f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2" 21126f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2(Mat A,Mat *B) 211349b5e25fSSatish Balay { 211449b5e25fSSatish Balay Mat C = *B; 211549b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 211649b5e25fSSatish Balay IS isrow = b->row,isicol = b->icol; 211749b5e25fSSatish Balay int *r,*ic,ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 211849b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 211949b5e25fSSatish Balay int *diag_offset=b->diag,idx,*ai=a->i,*aj=a->j,*pj; 212049b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,m1,m2,m3,m4,*pc,*w,*x,x1,x2,x3,x4; 212149b5e25fSSatish Balay MatScalar p1,p2,p3,p4; 212249b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 212349b5e25fSSatish Balay 212449b5e25fSSatish Balay PetscFunctionBegin; 212549b5e25fSSatish Balay ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 212649b5e25fSSatish Balay ierr = ISGetIndices(isicol,&ic);CHKERRQ(ierr); 212749b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(4*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 212849b5e25fSSatish Balay 212949b5e25fSSatish Balay for (i=0; i<n; i++) { 213049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 213149b5e25fSSatish Balay ajtmp = bj + bi[i]; 213249b5e25fSSatish Balay for (j=0; j<nz; j++) { 213349b5e25fSSatish Balay x = rtmp+4*ajtmp[j]; x[0] = x[1] = x[2] = x[3] = 0.0; 213449b5e25fSSatish Balay } 213549b5e25fSSatish Balay /* load in initial (unfactored row) */ 213649b5e25fSSatish Balay idx = r[i]; 213749b5e25fSSatish Balay nz = ai[idx+1] - ai[idx]; 213849b5e25fSSatish Balay ajtmpold = aj + ai[idx]; 213949b5e25fSSatish Balay v = aa + 4*ai[idx]; 214049b5e25fSSatish Balay for (j=0; j<nz; j++) { 214149b5e25fSSatish Balay x = rtmp+4*ic[ajtmpold[j]]; 214249b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 214349b5e25fSSatish Balay v += 4; 214449b5e25fSSatish Balay } 214549b5e25fSSatish Balay row = *ajtmp++; 214649b5e25fSSatish Balay while (row < i) { 214749b5e25fSSatish Balay pc = rtmp + 4*row; 214849b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 214949b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0) { 215049b5e25fSSatish Balay pv = ba + 4*diag_offset[row]; 215149b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 215249b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 215349b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p3*x2; 215449b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p4*x2; 215549b5e25fSSatish Balay pc[2] = m3 = p1*x3 + p3*x4; 215649b5e25fSSatish Balay pc[3] = m4 = p2*x3 + p4*x4; 215749b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 215849b5e25fSSatish Balay pv += 4; 215949b5e25fSSatish Balay for (j=0; j<nz; j++) { 216049b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 216149b5e25fSSatish Balay x = rtmp + 4*pj[j]; 216249b5e25fSSatish Balay x[0] -= m1*x1 + m3*x2; 216349b5e25fSSatish Balay x[1] -= m2*x1 + m4*x2; 216449b5e25fSSatish Balay x[2] -= m1*x3 + m3*x4; 216549b5e25fSSatish Balay x[3] -= m2*x3 + m4*x4; 216649b5e25fSSatish Balay pv += 4; 216749b5e25fSSatish Balay } 216849b5e25fSSatish Balay PLogFlops(16*nz+12); 216949b5e25fSSatish Balay } 217049b5e25fSSatish Balay row = *ajtmp++; 217149b5e25fSSatish Balay } 217249b5e25fSSatish Balay /* finished row so stick it into b->a */ 217349b5e25fSSatish Balay pv = ba + 4*bi[i]; 217449b5e25fSSatish Balay pj = bj + bi[i]; 217549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 217649b5e25fSSatish Balay for (j=0; j<nz; j++) { 217749b5e25fSSatish Balay x = rtmp+4*pj[j]; 217849b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 217949b5e25fSSatish Balay pv += 4; 218049b5e25fSSatish Balay } 218149b5e25fSSatish Balay /* invert diagonal block */ 218249b5e25fSSatish Balay w = ba + 4*diag_offset[i]; 218349b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_2(w);CHKERRQ(ierr); 218449b5e25fSSatish Balay /*Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work);*/ 218549b5e25fSSatish Balay } 218649b5e25fSSatish Balay 218749b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 218849b5e25fSSatish Balay ierr = ISRestoreIndices(isicol,&ic);CHKERRQ(ierr); 218949b5e25fSSatish Balay ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 219049b5e25fSSatish Balay C->factor = FACTOR_LU; 219149b5e25fSSatish Balay C->assembled = PETSC_TRUE; 219249b5e25fSSatish Balay PLogFlops(1.3333*8*b->mbs); /* from inverting diagonal blocks */ 219349b5e25fSSatish Balay PetscFunctionReturn(0); 219449b5e25fSSatish Balay } 219549b5e25fSSatish Balay /* 219649b5e25fSSatish Balay Version for when blocks are 2 by 2 Using natural ordering 219749b5e25fSSatish Balay */ 219849b5e25fSSatish Balay #undef __FUNC__ 21996f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering" 22006f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_2_NaturalOrdering(Mat A,Mat *B) 220149b5e25fSSatish Balay { 220249b5e25fSSatish Balay Mat C = *B; 220349b5e25fSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b = (Mat_SeqBAIJ *)C->data; 220449b5e25fSSatish Balay int ierr,i,j,n = a->mbs,*bi = b->i,*bj = b->j; 220549b5e25fSSatish Balay int *ajtmpold,*ajtmp,nz,row; 220649b5e25fSSatish Balay int *diag_offset = b->diag,*ai=a->i,*aj=a->j,*pj; 220749b5e25fSSatish Balay MatScalar *pv,*v,*rtmp,*pc,*w,*x; 220849b5e25fSSatish Balay MatScalar p1,p2,p3,p4,m1,m2,m3,m4,x1,x2,x3,x4; 220949b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 221049b5e25fSSatish Balay 221149b5e25fSSatish Balay PetscFunctionBegin; 221249b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(4*(n+1)*sizeof(MatScalar));CHKPTRQ(rtmp); 221349b5e25fSSatish Balay 221449b5e25fSSatish Balay for (i=0; i<n; i++) { 221549b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 221649b5e25fSSatish Balay ajtmp = bj + bi[i]; 221749b5e25fSSatish Balay for (j=0; j<nz; j++) { 221849b5e25fSSatish Balay x = rtmp+4*ajtmp[j]; 221949b5e25fSSatish Balay x[0] = x[1] = x[2] = x[3] = 0.0; 222049b5e25fSSatish Balay } 222149b5e25fSSatish Balay /* load in initial (unfactored row) */ 222249b5e25fSSatish Balay nz = ai[i+1] - ai[i]; 222349b5e25fSSatish Balay ajtmpold = aj + ai[i]; 222449b5e25fSSatish Balay v = aa + 4*ai[i]; 222549b5e25fSSatish Balay for (j=0; j<nz; j++) { 222649b5e25fSSatish Balay x = rtmp+4*ajtmpold[j]; 222749b5e25fSSatish Balay x[0] = v[0]; x[1] = v[1]; x[2] = v[2]; x[3] = v[3]; 222849b5e25fSSatish Balay v += 4; 222949b5e25fSSatish Balay } 223049b5e25fSSatish Balay row = *ajtmp++; 223149b5e25fSSatish Balay while (row < i) { 223249b5e25fSSatish Balay pc = rtmp + 4*row; 223349b5e25fSSatish Balay p1 = pc[0]; p2 = pc[1]; p3 = pc[2]; p4 = pc[3]; 223449b5e25fSSatish Balay if (p1 != 0.0 || p2 != 0.0 || p3 != 0.0 || p4 != 0.0) { 223549b5e25fSSatish Balay pv = ba + 4*diag_offset[row]; 223649b5e25fSSatish Balay pj = bj + diag_offset[row] + 1; 223749b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 223849b5e25fSSatish Balay pc[0] = m1 = p1*x1 + p3*x2; 223949b5e25fSSatish Balay pc[1] = m2 = p2*x1 + p4*x2; 224049b5e25fSSatish Balay pc[2] = m3 = p1*x3 + p3*x4; 224149b5e25fSSatish Balay pc[3] = m4 = p2*x3 + p4*x4; 224249b5e25fSSatish Balay nz = bi[row+1] - diag_offset[row] - 1; 224349b5e25fSSatish Balay pv += 4; 224449b5e25fSSatish Balay for (j=0; j<nz; j++) { 224549b5e25fSSatish Balay x1 = pv[0]; x2 = pv[1]; x3 = pv[2]; x4 = pv[3]; 224649b5e25fSSatish Balay x = rtmp + 4*pj[j]; 224749b5e25fSSatish Balay x[0] -= m1*x1 + m3*x2; 224849b5e25fSSatish Balay x[1] -= m2*x1 + m4*x2; 224949b5e25fSSatish Balay x[2] -= m1*x3 + m3*x4; 225049b5e25fSSatish Balay x[3] -= m2*x3 + m4*x4; 225149b5e25fSSatish Balay pv += 4; 225249b5e25fSSatish Balay } 225349b5e25fSSatish Balay PLogFlops(16*nz+12); 225449b5e25fSSatish Balay } 225549b5e25fSSatish Balay row = *ajtmp++; 225649b5e25fSSatish Balay } 225749b5e25fSSatish Balay /* finished row so stick it into b->a */ 225849b5e25fSSatish Balay pv = ba + 4*bi[i]; 225949b5e25fSSatish Balay pj = bj + bi[i]; 226049b5e25fSSatish Balay nz = bi[i+1] - bi[i]; 226149b5e25fSSatish Balay for (j=0; j<nz; j++) { 226249b5e25fSSatish Balay x = rtmp+4*pj[j]; 226349b5e25fSSatish Balay pv[0] = x[0]; pv[1] = x[1]; pv[2] = x[2]; pv[3] = x[3]; 226449b5e25fSSatish Balay pv += 4; 226549b5e25fSSatish Balay } 226649b5e25fSSatish Balay /* invert diagonal block */ 226749b5e25fSSatish Balay w = ba + 4*diag_offset[i]; 226849b5e25fSSatish Balay ierr = Kernel_A_gets_inverse_A_2(w);CHKERRQ(ierr); 226949b5e25fSSatish Balay /*Kernel_A_gets_inverse_A(bs,w,v_pivots,v_work);*/ 227049b5e25fSSatish Balay } 227149b5e25fSSatish Balay 227249b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 227349b5e25fSSatish Balay C->factor = FACTOR_LU; 227449b5e25fSSatish Balay C->assembled = PETSC_TRUE; 227549b5e25fSSatish Balay PLogFlops(1.3333*8*b->mbs); /* from inverting diagonal blocks */ 227649b5e25fSSatish Balay PetscFunctionReturn(0); 227749b5e25fSSatish Balay } 227849b5e25fSSatish Balay 227949b5e25fSSatish Balay /* ----------------------------------------------------------- */ 228049b5e25fSSatish Balay /* 228149b5e25fSSatish Balay Version for when blocks are 1 by 1. 228249b5e25fSSatish Balay */ 228349b5e25fSSatish Balay #undef __FUNC__ 22846f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_1" 22856f9a564bSHong Zhang int MatCholeskyFactorNumeric_SeqSBAIJ_1(Mat A,Mat *B) 228649b5e25fSSatish Balay { 228749b5e25fSSatish Balay Mat C = *B; 228849b5e25fSSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data; 228949b5e25fSSatish Balay IS ip = b->row; 2290066653e3SSatish Balay int *rip,*riip,ierr,i,j,mbs = a->mbs,*bi = b->i,*bj = b->j; 2291066653e3SSatish Balay int *ai = a->i,*aj = a->j; 2292066653e3SSatish Balay MatScalar *rtmp; 229349b5e25fSSatish Balay MatScalar *ba = b->a,*aa = a->a; 229449b5e25fSSatish Balay MatScalar dk,uikdi; 229549b5e25fSSatish Balay int k,jmin,jmax,*jl,*il,vj,nexti,juj,ili; 229649b5e25fSSatish Balay 229749b5e25fSSatish Balay PetscFunctionBegin; 229849b5e25fSSatish Balay ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 229949b5e25fSSatish Balay riip = rip; 230049b5e25fSSatish Balay 230149b5e25fSSatish Balay /* INITIALIZATION */ 230249b5e25fSSatish Balay /* il and jl record the first nonzero element in each row of the accessing 230349b5e25fSSatish Balay window U(0:k, k:mbs-1). 230449b5e25fSSatish Balay jl: list of rows to be added to uneliminated rows 230549b5e25fSSatish Balay i>= k: jl(i) is the first row to be added to row i 230649b5e25fSSatish Balay i< k: jl(i) is the row following row i in some list of rows 230749b5e25fSSatish Balay jl(i) = mbs indicates the end of a list 230849b5e25fSSatish Balay il(i): points to the first nonzero element in columns k,...,mbs-1 of 230949b5e25fSSatish Balay row i of U */ 231049b5e25fSSatish Balay rtmp = (MatScalar*)PetscMalloc(mbs*sizeof(MatScalar));CHKPTRQ(rtmp); 231149b5e25fSSatish Balay il = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(il); 231249b5e25fSSatish Balay jl = (int*)PetscMalloc(mbs*sizeof(int));CHKPTRQ(jl); 231349b5e25fSSatish Balay for (i=0; i<mbs; i++) { 231449b5e25fSSatish Balay rtmp[i] = 0.0; jl[i] = mbs; il[0] = 0; 231549b5e25fSSatish Balay } 231649b5e25fSSatish Balay 231749b5e25fSSatish Balay /* FOR EACH ROW K */ 231849b5e25fSSatish Balay for (k = 0; k<mbs; k++){ 231949b5e25fSSatish Balay 232049b5e25fSSatish Balay /* INITIALIZE K-TH ROW WITH ELEMENTS NONZERO IN ROW P(K) OF A */ 232149b5e25fSSatish Balay jmin = ai[rip[k]]; jmax = ai[rip[k]+1]; 232249b5e25fSSatish Balay if (jmin < jmax) { 232349b5e25fSSatish Balay for (j = jmin; j < jmax; j++){ 232449b5e25fSSatish Balay vj = riip[aj[j]]; 232549b5e25fSSatish Balay if (k <= vj) rtmp[vj] = aa[j]; 232649b5e25fSSatish Balay } 232749b5e25fSSatish Balay } 232849b5e25fSSatish Balay 232949b5e25fSSatish Balay /* MODIFY K-TH ROW BY ADDING IN THOSE ROWS I WITH U(I,K) NE 0 233049b5e25fSSatish Balay FOR EACH ROW I TO BE ADDED IN */ 233149b5e25fSSatish Balay dk = rtmp[k]; 233249b5e25fSSatish Balay i = jl[k]; /* first row to be added to k_th row */ 233349b5e25fSSatish Balay /* printf(" k=%d, pivot row = %d\n",k,i); */ 233449b5e25fSSatish Balay 233549b5e25fSSatish Balay while (i < mbs){ 233649b5e25fSSatish Balay nexti = jl[i]; /* next row to be added to k_th row */ 233749b5e25fSSatish Balay /* printf(" pivot row = %d\n", nexti); */ 233849b5e25fSSatish Balay 233949b5e25fSSatish Balay /* COMPUTE MULTIPLIER AND UPDATE DIAGONAL ELEMENT */ 234049b5e25fSSatish Balay ili = il[i]; /* index of first nonzero element in U(i,k:bms-1) */ 234149b5e25fSSatish Balay uikdi = - ba[ili]*ba[i]; 234249b5e25fSSatish Balay dk += uikdi*ba[ili]; 234349b5e25fSSatish Balay ba[ili] = uikdi; /* update U(i,k) */ 234449b5e25fSSatish Balay 234549b5e25fSSatish Balay /* ADD MULTIPLE OF ROW I TO K-TH ROW ... */ 234649b5e25fSSatish Balay jmin = ili + 1; jmax = bi[i+1]; 234749b5e25fSSatish Balay if (jmin < jmax){ 234849b5e25fSSatish Balay for (j=jmin; j<jmax; j++) rtmp[bj[j]] += uikdi*ba[j]; 234949b5e25fSSatish Balay /* ... AND ADD I TO ROW LIST FOR NEXT NONZERO ENTRY */ 235049b5e25fSSatish Balay il[i] = jmin; /* update il(i) in column k+1, ... mbs-1 */ 235149b5e25fSSatish Balay j = bj[jmin]; 235249b5e25fSSatish Balay jl[i] = jl[j]; jl[j] = i; /* update jl */ 235349b5e25fSSatish Balay } 235449b5e25fSSatish Balay i = nexti; 235549b5e25fSSatish Balay /* printf(" pivot row i=%d\n",i); */ 235649b5e25fSSatish Balay } 235749b5e25fSSatish Balay 235849b5e25fSSatish Balay /* CHECK FOR ZERO PIVOT AND SAVE DIAGONAL ELEMENT */ 235949b5e25fSSatish Balay if (dk == 0.0){ 236049b5e25fSSatish Balay SETERRQ(PETSC_ERR_MAT_LU_ZRPVT,0,"Zero pivot"); 236149b5e25fSSatish Balay } 236249b5e25fSSatish Balay 236349b5e25fSSatish Balay /* SAVE NONZERO ENTRIES IN K-TH ROW OF U ... */ 2364f3dd7b2dSKris Buschelman ba[k] = 1.0/dk; 236549b5e25fSSatish Balay jmin = bi[k]; jmax = bi[k+1]; 236649b5e25fSSatish Balay if (jmin < jmax) { 236749b5e25fSSatish Balay for (j=jmin; j<jmax; j++){ 236849b5e25fSSatish Balay juj = bj[j]; ba[j] = rtmp[juj]; rtmp[juj] = 0.0; 236949b5e25fSSatish Balay } 237049b5e25fSSatish Balay 237149b5e25fSSatish Balay /* ... AND ADD K TO ROW LIST FOR FIRST NONZERO ENTRY IN K-TH ROW */ 237249b5e25fSSatish Balay il[k] = jmin; 237349b5e25fSSatish Balay i = bj[jmin]; 237449b5e25fSSatish Balay jl[k] = jl[i]; jl[i] = k; 237549b5e25fSSatish Balay } 237649b5e25fSSatish Balay } 237749b5e25fSSatish Balay 237849b5e25fSSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 237949b5e25fSSatish Balay ierr = PetscFree(il);CHKERRQ(ierr); 238049b5e25fSSatish Balay ierr = PetscFree(jl);CHKERRQ(ierr); 238149b5e25fSSatish Balay 238249b5e25fSSatish Balay ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 238349b5e25fSSatish Balay C->factor = FACTOR_LU; 238449b5e25fSSatish Balay C->assembled = PETSC_TRUE; 238549b5e25fSSatish Balay PLogFlops(b->mbs); 238649b5e25fSSatish Balay PetscFunctionReturn(0); 238749b5e25fSSatish Balay } 238849b5e25fSSatish Balay 238949b5e25fSSatish Balay #undef __FUNC__ 23906f9a564bSHong Zhang #define __FUNC__ "MatCholeskyFactor_SeqSBAIJ" 2391*b8b23757SHong Zhang int MatCholeskyFactor_SeqSBAIJ(Mat A,IS perm,PetscReal f) 239249b5e25fSSatish Balay { 23936f9a564bSHong Zhang Mat_SeqSBAIJ *mat = (Mat_SeqSBAIJ*)A->data; 239449b5e25fSSatish Balay int ierr,refct; 239549b5e25fSSatish Balay Mat C; 239649b5e25fSSatish Balay PetscOps *Abops; 239749b5e25fSSatish Balay MatOps Aops; 239849b5e25fSSatish Balay 239949b5e25fSSatish Balay PetscFunctionBegin; 2400*b8b23757SHong Zhang ierr = MatCholeskyFactorSymbolic(A,perm,f,&C);CHKERRQ(ierr); 2401a4ada70bSHong Zhang ierr = MatCholeskyFactorNumeric(A,&C);CHKERRQ(ierr); 240249b5e25fSSatish Balay 240349b5e25fSSatish Balay /* free all the data structures from mat */ 240449b5e25fSSatish Balay ierr = PetscFree(mat->a);CHKERRQ(ierr); 240549b5e25fSSatish Balay if (!mat->singlemalloc) { 240649b5e25fSSatish Balay ierr = PetscFree(mat->i);CHKERRQ(ierr); 240749b5e25fSSatish Balay ierr = PetscFree(mat->j);CHKERRQ(ierr); 240849b5e25fSSatish Balay } 240949b5e25fSSatish Balay if (mat->diag) {ierr = PetscFree(mat->diag);CHKERRQ(ierr);} 241049b5e25fSSatish Balay if (mat->ilen) {ierr = PetscFree(mat->ilen);CHKERRQ(ierr);} 241149b5e25fSSatish Balay if (mat->imax) {ierr = PetscFree(mat->imax);CHKERRQ(ierr);} 241249b5e25fSSatish Balay if (mat->solve_work) {ierr = PetscFree(mat->solve_work);CHKERRQ(ierr);} 241349b5e25fSSatish Balay if (mat->mult_work) {ierr = PetscFree(mat->mult_work);CHKERRQ(ierr);} 241449b5e25fSSatish Balay if (mat->icol) {ierr = ISDestroy(mat->icol);CHKERRQ(ierr);} 241549b5e25fSSatish Balay ierr = PetscFree(mat);CHKERRQ(ierr); 241649b5e25fSSatish Balay 241749b5e25fSSatish Balay ierr = MapDestroy(A->rmap);CHKERRQ(ierr); 241849b5e25fSSatish Balay ierr = MapDestroy(A->cmap);CHKERRQ(ierr); 241949b5e25fSSatish Balay 242049b5e25fSSatish Balay /* 242149b5e25fSSatish Balay This is horrible,horrible code. We need to keep the 242249b5e25fSSatish Balay A pointers for the bops and ops but copy everything 242349b5e25fSSatish Balay else from C. 242449b5e25fSSatish Balay */ 242549b5e25fSSatish Balay Abops = A->bops; 242649b5e25fSSatish Balay Aops = A->ops; 242749b5e25fSSatish Balay refct = A->refct; 242849b5e25fSSatish Balay ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr); 2429a4ada70bSHong Zhang mat = (Mat_SeqSBAIJ*)A->data; 243049b5e25fSSatish Balay PLogObjectParent(A,mat->icol); 243149b5e25fSSatish Balay 243249b5e25fSSatish Balay A->bops = Abops; 243349b5e25fSSatish Balay A->ops = Aops; 243449b5e25fSSatish Balay A->qlist = 0; 243549b5e25fSSatish Balay A->refct = refct; 243649b5e25fSSatish Balay /* copy over the type_name and name */ 243749b5e25fSSatish Balay ierr = PetscStrallocpy(C->type_name,&A->type_name);CHKERRQ(ierr); 243849b5e25fSSatish Balay ierr = PetscStrallocpy(C->name,&A->name);CHKERRQ(ierr); 243949b5e25fSSatish Balay 244049b5e25fSSatish Balay PetscHeaderDestroy(C); 244149b5e25fSSatish Balay PetscFunctionReturn(0); 244249b5e25fSSatish Balay } 244349b5e25fSSatish Balay 244449b5e25fSSatish Balay 2445