11c2a3de1SBarry Smith 2c6db04a5SJed Brown #include <../src/mat/impls/sbaij/seq/sbaij.h> 3af0996ceSBarry Smith #include <petsc/private/kernels/blockinvert.h> 481278733SSatish Balay 581278733SSatish Balay /* Version for when blocks are 4 by 4 */ 60481f469SBarry Smith PetscErrorCode MatCholeskyFactorNumeric_SeqSBAIJ_4(Mat C,Mat A,const MatFactorInfo *info) 781278733SSatish Balay { 881278733SSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ*)C->data; 981278733SSatish Balay IS perm = b->row; 105d0c19d7SBarry Smith const PetscInt *ai,*aj,*perm_ptr,mbs=a->mbs,*bi=b->i,*bj=b->j; 115d0c19d7SBarry Smith PetscInt i,j,*a2anew,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili; 1281278733SSatish Balay MatScalar *ba = b->a,*aa,*ap,*dk,*uik; 1381278733SSatish Balay MatScalar *u,*diag,*rtmp,*rtmp_ptr; 14ace3abfcSBarry Smith PetscBool pivotinblocks = b->pivotinblocks; 15182b8fbaSHong Zhang PetscReal shift = info->shiftamount; 160164db54SHong Zhang PetscBool allowzeropivot,zeropivotdetected=PETSC_FALSE; 1781278733SSatish Balay 1881278733SSatish Balay PetscFunctionBegin; 1981278733SSatish Balay /* initialization */ 200164db54SHong Zhang allowzeropivot = PetscNot(A->erroriffailure); 219566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(16*mbs,&rtmp)); 229566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(mbs,&il,mbs,&jl)); 236df5ee2eSHong Zhang il[0] = 0; 246df5ee2eSHong Zhang for (i=0; i<mbs; i++) jl[i] = mbs; 256df5ee2eSHong Zhang 269566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(16,&dk,16,&uik)); 279566063dSJacob Faibussowitsch PetscCall(ISGetIndices(perm,&perm_ptr)); 2881278733SSatish Balay 2981278733SSatish Balay /* check permutation */ 3081278733SSatish Balay if (!a->permute) { 3181278733SSatish Balay ai = a->i; aj = a->j; aa = a->a; 3281278733SSatish Balay } else { 3381278733SSatish Balay ai = a->inew; aj = a->jnew; 349566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(16*ai[mbs],&aa)); 359566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(aa,a->a,16*ai[mbs])); 369566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(ai[mbs],&a2anew)); 379566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(a2anew,a->a2anew,ai[mbs])); 3881278733SSatish Balay 3981278733SSatish Balay for (i=0; i<mbs; i++) { 4081278733SSatish Balay jmin = ai[i]; jmax = ai[i+1]; 4181278733SSatish Balay for (j=jmin; j<jmax; j++) { 4281278733SSatish Balay while (a2anew[j] != j) { 4381278733SSatish Balay k = a2anew[j]; a2anew[j] = a2anew[k]; a2anew[k] = k; 4481278733SSatish Balay for (k1=0; k1<16; k1++) { 4581278733SSatish Balay dk[k1] = aa[k*16+k1]; 4681278733SSatish Balay aa[k*16+k1] = aa[j*16+k1]; 4781278733SSatish Balay aa[j*16+k1] = dk[k1]; 4881278733SSatish Balay } 4981278733SSatish Balay } 5081278733SSatish Balay /* transform columnoriented blocks that lie in the lower triangle to roworiented blocks */ 5181278733SSatish Balay if (i > aj[j]) { 5281278733SSatish Balay /* printf("change orientation, row: %d, col: %d\n",i,aj[j]); */ 5381278733SSatish Balay ap = aa + j*16; /* ptr to the beginning of j-th block of aa */ 5481278733SSatish Balay for (k=0; k<16; k++) dk[k] = ap[k]; /* dk <- j-th block of aa */ 5581278733SSatish Balay for (k=0; k<4; k++) { /* j-th block of aa <- dk^T */ 5681278733SSatish Balay for (k1=0; k1<4; k1++) *ap++ = dk[k + 4*k1]; 5781278733SSatish Balay } 5881278733SSatish Balay } 5981278733SSatish Balay } 6081278733SSatish Balay } 619566063dSJacob Faibussowitsch PetscCall(PetscFree(a2anew)); 6281278733SSatish Balay } 6381278733SSatish Balay 6481278733SSatish Balay /* for each row k */ 6581278733SSatish Balay for (k = 0; k<mbs; k++) { 6681278733SSatish Balay 6781278733SSatish Balay /*initialize k-th row with elements nonzero in row perm(k) of A */ 6881278733SSatish Balay jmin = ai[perm_ptr[k]]; jmax = ai[perm_ptr[k]+1]; 6981278733SSatish Balay if (jmin < jmax) { 7081278733SSatish Balay ap = aa + jmin*16; 7181278733SSatish Balay for (j = jmin; j < jmax; j++) { 7281278733SSatish Balay vj = perm_ptr[aj[j]]; /* block col. index */ 7381278733SSatish Balay rtmp_ptr = rtmp + vj*16; 7481278733SSatish Balay for (i=0; i<16; i++) *rtmp_ptr++ = *ap++; 7581278733SSatish Balay } 7681278733SSatish Balay } 7781278733SSatish Balay 7881278733SSatish Balay /* modify k-th row by adding in those rows i with U(i,k) != 0 */ 799566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(dk,rtmp+k*16,16)); 8081278733SSatish Balay i = jl[k]; /* first row to be added to k_th row */ 8181278733SSatish Balay 8281278733SSatish Balay while (i < mbs) { 8381278733SSatish Balay nexti = jl[i]; /* next row to be added to k_th row */ 8481278733SSatish Balay 8581278733SSatish Balay /* compute multiplier */ 8681278733SSatish Balay ili = il[i]; /* index of first nonzero element in U(i,k:bms-1) */ 8781278733SSatish Balay 8881278733SSatish Balay /* uik = -inv(Di)*U_bar(i,k) */ 8981278733SSatish Balay diag = ba + i*16; 9081278733SSatish Balay u = ba + ili*16; 9181278733SSatish Balay 9281278733SSatish Balay uik[0] = -(diag[0]*u[0] + diag[4]*u[1] + diag[8]*u[2] + diag[12]*u[3]); 9381278733SSatish Balay uik[1] = -(diag[1]*u[0] + diag[5]*u[1] + diag[9]*u[2] + diag[13]*u[3]); 9481278733SSatish Balay uik[2] = -(diag[2]*u[0] + diag[6]*u[1] + diag[10]*u[2]+ diag[14]*u[3]); 9581278733SSatish Balay uik[3] = -(diag[3]*u[0] + diag[7]*u[1] + diag[11]*u[2]+ diag[15]*u[3]); 9681278733SSatish Balay 9781278733SSatish Balay uik[4] = -(diag[0]*u[4] + diag[4]*u[5] + diag[8]*u[6] + diag[12]*u[7]); 9881278733SSatish Balay uik[5] = -(diag[1]*u[4] + diag[5]*u[5] + diag[9]*u[6] + diag[13]*u[7]); 9981278733SSatish Balay uik[6] = -(diag[2]*u[4] + diag[6]*u[5] + diag[10]*u[6]+ diag[14]*u[7]); 10081278733SSatish Balay uik[7] = -(diag[3]*u[4] + diag[7]*u[5] + diag[11]*u[6]+ diag[15]*u[7]); 10181278733SSatish Balay 10281278733SSatish Balay uik[8] = -(diag[0]*u[8] + diag[4]*u[9] + diag[8]*u[10] + diag[12]*u[11]); 10381278733SSatish Balay uik[9] = -(diag[1]*u[8] + diag[5]*u[9] + diag[9]*u[10] + diag[13]*u[11]); 10481278733SSatish Balay uik[10]= -(diag[2]*u[8] + diag[6]*u[9] + diag[10]*u[10]+ diag[14]*u[11]); 10581278733SSatish Balay uik[11]= -(diag[3]*u[8] + diag[7]*u[9] + diag[11]*u[10]+ diag[15]*u[11]); 10681278733SSatish Balay 10781278733SSatish Balay uik[12]= -(diag[0]*u[12] + diag[4]*u[13] + diag[8]*u[14] + diag[12]*u[15]); 10881278733SSatish Balay uik[13]= -(diag[1]*u[12] + diag[5]*u[13] + diag[9]*u[14] + diag[13]*u[15]); 10981278733SSatish Balay uik[14]= -(diag[2]*u[12] + diag[6]*u[13] + diag[10]*u[14]+ diag[14]*u[15]); 11081278733SSatish Balay uik[15]= -(diag[3]*u[12] + diag[7]*u[13] + diag[11]*u[14]+ diag[15]*u[15]); 11181278733SSatish Balay 11281278733SSatish Balay /* update D(k) += -U(i,k)^T * U_bar(i,k) */ 11381278733SSatish Balay dk[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3]; 11481278733SSatish Balay dk[1] += uik[4]*u[0] + uik[5]*u[1] + uik[6]*u[2] + uik[7]*u[3]; 11581278733SSatish Balay dk[2] += uik[8]*u[0] + uik[9]*u[1] + uik[10]*u[2]+ uik[11]*u[3]; 11681278733SSatish Balay dk[3] += uik[12]*u[0]+ uik[13]*u[1]+ uik[14]*u[2]+ uik[15]*u[3]; 11781278733SSatish Balay 11881278733SSatish Balay dk[4] += uik[0]*u[4] + uik[1]*u[5] + uik[2]*u[6] + uik[3]*u[7]; 11981278733SSatish Balay dk[5] += uik[4]*u[4] + uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7]; 12081278733SSatish Balay dk[6] += uik[8]*u[4] + uik[9]*u[5] + uik[10]*u[6]+ uik[11]*u[7]; 12181278733SSatish Balay dk[7] += uik[12]*u[4]+ uik[13]*u[5]+ uik[14]*u[6]+ uik[15]*u[7]; 12281278733SSatish Balay 12381278733SSatish Balay dk[8] += uik[0]*u[8] + uik[1]*u[9] + uik[2]*u[10] + uik[3]*u[11]; 12481278733SSatish Balay dk[9] += uik[4]*u[8] + uik[5]*u[9] + uik[6]*u[10] + uik[7]*u[11]; 12581278733SSatish Balay dk[10]+= uik[8]*u[8] + uik[9]*u[9] + uik[10]*u[10]+ uik[11]*u[11]; 12681278733SSatish Balay dk[11]+= uik[12]*u[8]+ uik[13]*u[9]+ uik[14]*u[10]+ uik[15]*u[11]; 12781278733SSatish Balay 12881278733SSatish Balay dk[12]+= uik[0]*u[12] + uik[1]*u[13] + uik[2]*u[14] + uik[3]*u[15]; 12981278733SSatish Balay dk[13]+= uik[4]*u[12] + uik[5]*u[13] + uik[6]*u[14] + uik[7]*u[15]; 13081278733SSatish Balay dk[14]+= uik[8]*u[12] + uik[9]*u[13] + uik[10]*u[14]+ uik[11]*u[15]; 13181278733SSatish Balay dk[15]+= uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]+ uik[15]*u[15]; 13281278733SSatish Balay 1339566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(64.0*4.0)); 134187a9f4bSHong Zhang 13581278733SSatish Balay /* update -U(i,k) */ 1369566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(ba+ili*16,uik,16)); 13781278733SSatish Balay 13881278733SSatish Balay /* add multiple of row i to k-th row ... */ 13981278733SSatish Balay jmin = ili + 1; jmax = bi[i+1]; 14081278733SSatish Balay if (jmin < jmax) { 14181278733SSatish Balay for (j=jmin; j<jmax; j++) { 14281278733SSatish Balay /* rtmp += -U(i,k)^T * U_bar(i,j) */ 14381278733SSatish Balay rtmp_ptr = rtmp + bj[j]*16; 14481278733SSatish Balay u = ba + j*16; 14581278733SSatish Balay rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3]; 14681278733SSatish Balay rtmp_ptr[1] += uik[4]*u[0] + uik[5]*u[1] + uik[6]*u[2] + uik[7]*u[3]; 14781278733SSatish Balay rtmp_ptr[2] += uik[8]*u[0] + uik[9]*u[1] + uik[10]*u[2]+ uik[11]*u[3]; 14881278733SSatish Balay rtmp_ptr[3] += uik[12]*u[0]+ uik[13]*u[1]+ uik[14]*u[2]+ uik[15]*u[3]; 14981278733SSatish Balay 15081278733SSatish Balay rtmp_ptr[4] += uik[0]*u[4] + uik[1]*u[5] + uik[2]*u[6] + uik[3]*u[7]; 15181278733SSatish Balay rtmp_ptr[5] += uik[4]*u[4] + uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7]; 15281278733SSatish Balay rtmp_ptr[6] += uik[8]*u[4] + uik[9]*u[5] + uik[10]*u[6]+ uik[11]*u[7]; 15381278733SSatish Balay rtmp_ptr[7] += uik[12]*u[4]+ uik[13]*u[5]+ uik[14]*u[6]+ uik[15]*u[7]; 15481278733SSatish Balay 15581278733SSatish Balay rtmp_ptr[8] += uik[0]*u[8] + uik[1]*u[9] + uik[2]*u[10] + uik[3]*u[11]; 15681278733SSatish Balay rtmp_ptr[9] += uik[4]*u[8] + uik[5]*u[9] + uik[6]*u[10] + uik[7]*u[11]; 15781278733SSatish Balay rtmp_ptr[10]+= uik[8]*u[8] + uik[9]*u[9] + uik[10]*u[10]+ uik[11]*u[11]; 15881278733SSatish Balay rtmp_ptr[11]+= uik[12]*u[8]+ uik[13]*u[9]+ uik[14]*u[10]+ uik[15]*u[11]; 15981278733SSatish Balay 16081278733SSatish Balay rtmp_ptr[12]+= uik[0]*u[12] + uik[1]*u[13] + uik[2]*u[14] + uik[3]*u[15]; 16181278733SSatish Balay rtmp_ptr[13]+= uik[4]*u[12] + uik[5]*u[13] + uik[6]*u[14] + uik[7]*u[15]; 16281278733SSatish Balay rtmp_ptr[14]+= uik[8]*u[12] + uik[9]*u[13] + uik[10]*u[14]+ uik[11]*u[15]; 16381278733SSatish Balay rtmp_ptr[15]+= uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]+ uik[15]*u[15]; 16481278733SSatish Balay } 1659566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0*64.0*(jmax-jmin))); 16681278733SSatish Balay 16781278733SSatish Balay /* ... add i to row list for next nonzero entry */ 16881278733SSatish Balay il[i] = jmin; /* update il(i) in column k+1, ... mbs-1 */ 16981278733SSatish Balay j = bj[jmin]; 17081278733SSatish Balay jl[i] = jl[j]; jl[j] = i; /* update jl */ 17181278733SSatish Balay } 17281278733SSatish Balay i = nexti; 17381278733SSatish Balay } 17481278733SSatish Balay 17581278733SSatish Balay /* save nonzero entries in k-th row of U ... */ 17681278733SSatish Balay 17781278733SSatish Balay /* invert diagonal block */ 17881278733SSatish Balay diag = ba+k*16; 1799566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(diag,dk,16)); 180bcd9e38bSBarry Smith 181bcd9e38bSBarry Smith if (pivotinblocks) { 1829566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_4(diag,shift, allowzeropivot,&zeropivotdetected)); 1837b6c816cSBarry Smith if (zeropivotdetected) C->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 184bcd9e38bSBarry Smith } else { 1859566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_4_nopivot(diag)); 186bcd9e38bSBarry Smith } 18781278733SSatish Balay 18881278733SSatish Balay jmin = bi[k]; jmax = bi[k+1]; 18981278733SSatish Balay if (jmin < jmax) { 19081278733SSatish Balay for (j=jmin; j<jmax; j++) { 19181278733SSatish Balay vj = bj[j]; /* block col. index of U */ 19281278733SSatish Balay u = ba + j*16; 19381278733SSatish Balay rtmp_ptr = rtmp + vj*16; 19481278733SSatish Balay for (k1=0; k1<16; k1++) { 19581278733SSatish Balay *u++ = *rtmp_ptr; 19681278733SSatish Balay *rtmp_ptr++ = 0.0; 19781278733SSatish Balay } 19881278733SSatish Balay } 19981278733SSatish Balay 20081278733SSatish Balay /* ... add k to row list for first nonzero entry in k-th row */ 20181278733SSatish Balay il[k] = jmin; 20281278733SSatish Balay i = bj[jmin]; 20381278733SSatish Balay jl[k] = jl[i]; jl[i] = k; 20481278733SSatish Balay } 20581278733SSatish Balay } 20681278733SSatish Balay 2079566063dSJacob Faibussowitsch PetscCall(PetscFree(rtmp)); 2089566063dSJacob Faibussowitsch PetscCall(PetscFree2(il,jl)); 2099566063dSJacob Faibussowitsch PetscCall(PetscFree2(dk,uik)); 210*1baa6e33SBarry Smith if (a->permute) PetscCall(PetscFree(aa)); 21181278733SSatish Balay 2129566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(perm,&perm_ptr)); 21326fbe8dcSKarl Rupp 2144f79d315SHong Zhang C->ops->solve = MatSolve_SeqSBAIJ_4_inplace; 2154f79d315SHong Zhang C->ops->solvetranspose = MatSolve_SeqSBAIJ_4_inplace; 21681278733SSatish Balay C->assembled = PETSC_TRUE; 21781278733SSatish Balay C->preallocated = PETSC_TRUE; 21826fbe8dcSKarl Rupp 2199566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.3333*64*b->mbs)); /* from inverting diagonal blocks */ 22081278733SSatish Balay PetscFunctionReturn(0); 22181278733SSatish Balay } 222