1*81278733SSatish Balay #include "sbaij.h" 2*81278733SSatish Balay #include "src/inline/ilu.h" 3*81278733SSatish Balay 4*81278733SSatish Balay /* 5*81278733SSatish Balay Version for when blocks are 5 by 5 Using natural ordering 6*81278733SSatish Balay */ 7*81278733SSatish Balay #undef __FUNC__ 8*81278733SSatish Balay #define __FUNC__ "MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering" 9*81278733SSatish Balay int MatCholeskyFactorNumeric_SeqSBAIJ_5_NaturalOrdering(Mat A,Mat *B) 10*81278733SSatish Balay { 11*81278733SSatish Balay Mat C = *B; 12*81278733SSatish Balay Mat_SeqSBAIJ *a = (Mat_SeqSBAIJ*)A->data,*b = (Mat_SeqSBAIJ *)C->data; 13*81278733SSatish Balay int ierr,i,j,mbs=a->mbs,*bi=b->i,*bj=b->j; 14*81278733SSatish Balay int *ai,*aj,k,k1,jmin,jmax,*jl,*il,vj,nexti,ili; 15*81278733SSatish Balay MatScalar *ba = b->a,*aa,*ap,*dk,*uik; 16*81278733SSatish Balay MatScalar *u,*d,*rtmp,*rtmp_ptr; 17*81278733SSatish Balay 18*81278733SSatish Balay PetscFunctionBegin; 19*81278733SSatish Balay 20*81278733SSatish Balay /* initialization */ 21*81278733SSatish Balay ierr = PetscMalloc(25*mbs*sizeof(MatScalar),&rtmp);CHKERRQ(ierr); 22*81278733SSatish Balay ierr = PetscMemzero(rtmp,25*mbs*sizeof(MatScalar));CHKERRQ(ierr); 23*81278733SSatish Balay ierr = PetscMalloc(2*mbs*sizeof(int),&il);CHKERRQ(ierr); 24*81278733SSatish Balay jl = il + mbs; 25*81278733SSatish Balay for (i=0; i<mbs; i++) { 26*81278733SSatish Balay jl[i] = mbs; il[0] = 0; 27*81278733SSatish Balay } 28*81278733SSatish Balay ierr = PetscMalloc(50*sizeof(MatScalar),&dk);CHKERRQ(ierr); 29*81278733SSatish Balay uik = dk + 25; 30*81278733SSatish Balay 31*81278733SSatish Balay ai = a->i; aj = a->j; aa = a->a; 32*81278733SSatish Balay 33*81278733SSatish Balay /* for each row k */ 34*81278733SSatish Balay for (k = 0; k<mbs; k++){ 35*81278733SSatish Balay 36*81278733SSatish Balay /*initialize k-th row with elements nonzero in row k of A */ 37*81278733SSatish Balay jmin = ai[k]; jmax = ai[k+1]; 38*81278733SSatish Balay if (jmin < jmax) { 39*81278733SSatish Balay ap = aa + jmin*25; 40*81278733SSatish Balay for (j = jmin; j < jmax; j++){ 41*81278733SSatish Balay vj = aj[j]; /* block col. index */ 42*81278733SSatish Balay rtmp_ptr = rtmp + vj*25; 43*81278733SSatish Balay for (i=0; i<25; i++) *rtmp_ptr++ = *ap++; 44*81278733SSatish Balay } 45*81278733SSatish Balay } 46*81278733SSatish Balay 47*81278733SSatish Balay /* modify k-th row by adding in those rows i with U(i,k) != 0 */ 48*81278733SSatish Balay ierr = PetscMemcpy(dk,rtmp+k*25,25*sizeof(MatScalar));CHKERRQ(ierr); 49*81278733SSatish Balay i = jl[k]; /* first row to be added to k_th row */ 50*81278733SSatish Balay 51*81278733SSatish Balay while (i < mbs){ 52*81278733SSatish Balay nexti = jl[i]; /* next row to be added to k_th row */ 53*81278733SSatish Balay 54*81278733SSatish Balay /* compute multiplier */ 55*81278733SSatish Balay ili = il[i]; /* index of first nonzero element in U(i,k:bms-1) */ 56*81278733SSatish Balay 57*81278733SSatish Balay /* uik = -inv(Di)*U_bar(i,k) */ 58*81278733SSatish Balay d = ba + i*25; 59*81278733SSatish Balay u = ba + ili*25; 60*81278733SSatish Balay 61*81278733SSatish Balay uik[0] = -(d[0]*u[0] + d[5]*u[1] + d[10]*u[2] + d[15]*u[3] + d[20]*u[4]); 62*81278733SSatish Balay uik[1] = -(d[1]*u[0] + d[6]*u[1] + d[11]*u[2] + d[16]*u[3] + d[21]*u[4]); 63*81278733SSatish Balay uik[2] = -(d[2]*u[0] + d[7]*u[1] + d[12]*u[2] + d[17]*u[3] + d[22]*u[4]); 64*81278733SSatish Balay uik[3] = -(d[3]*u[0] + d[8]*u[1] + d[13]*u[2] + d[18]*u[3] + d[23]*u[4]); 65*81278733SSatish Balay uik[4] = -(d[4]*u[0] + d[9]*u[1] + d[14]*u[2] + d[19]*u[3] + d[24]*u[4]); 66*81278733SSatish Balay 67*81278733SSatish Balay uik[5] = -(d[0]*u[5] + d[5]*u[6] + d[10]*u[7] + d[15]*u[8] + d[20]*u[9]); 68*81278733SSatish Balay uik[6] = -(d[1]*u[5] + d[6]*u[6] + d[11]*u[7] + d[16]*u[8] + d[21]*u[9]); 69*81278733SSatish Balay uik[7] = -(d[2]*u[5] + d[7]*u[6] + d[12]*u[7] + d[17]*u[8] + d[22]*u[9]); 70*81278733SSatish Balay uik[8] = -(d[3]*u[5] + d[8]*u[6] + d[13]*u[7] + d[18]*u[8] + d[23]*u[9]); 71*81278733SSatish Balay uik[9] = -(d[4]*u[5] + d[9]*u[6] + d[14]*u[7] + d[19]*u[8] + d[24]*u[9]); 72*81278733SSatish Balay 73*81278733SSatish Balay uik[10]= -(d[0]*u[10] + d[5]*u[11] + d[10]*u[12] + d[15]*u[13] + d[20]*u[14]); 74*81278733SSatish Balay uik[11]= -(d[1]*u[10] + d[6]*u[11] + d[11]*u[12] + d[16]*u[13] + d[21]*u[14]); 75*81278733SSatish Balay uik[12]= -(d[2]*u[10] + d[7]*u[11] + d[12]*u[12] + d[17]*u[13] + d[22]*u[14]); 76*81278733SSatish Balay uik[13]= -(d[3]*u[10] + d[8]*u[11] + d[13]*u[12] + d[18]*u[13] + d[23]*u[14]); 77*81278733SSatish Balay uik[14]= -(d[4]*u[10] + d[9]*u[11] + d[14]*u[12] + d[19]*u[13] + d[24]*u[14]); 78*81278733SSatish Balay 79*81278733SSatish Balay uik[15]= -(d[0]*u[15] + d[5]*u[16] + d[10]*u[17] + d[15]*u[18] + d[20]*u[19]); 80*81278733SSatish Balay uik[16]= -(d[1]*u[15] + d[6]*u[16] + d[11]*u[17] + d[16]*u[18] + d[21]*u[19]); 81*81278733SSatish Balay uik[17]= -(d[2]*u[15] + d[7]*u[16] + d[12]*u[17] + d[17]*u[18] + d[22]*u[19]); 82*81278733SSatish Balay uik[18]= -(d[3]*u[15] + d[8]*u[16] + d[13]*u[17] + d[18]*u[18] + d[23]*u[19]); 83*81278733SSatish Balay uik[19]= -(d[4]*u[15] + d[9]*u[16] + d[14]*u[17] + d[19]*u[18] + d[24]*u[19]); 84*81278733SSatish Balay 85*81278733SSatish Balay uik[20]= -(d[0]*u[20] + d[5]*u[21] + d[10]*u[22] + d[15]*u[23] + d[20]*u[24]); 86*81278733SSatish Balay uik[21]= -(d[1]*u[20] + d[6]*u[21] + d[11]*u[22] + d[16]*u[23] + d[21]*u[24]); 87*81278733SSatish Balay uik[22]= -(d[2]*u[20] + d[7]*u[21] + d[12]*u[22] + d[17]*u[23] + d[22]*u[24]); 88*81278733SSatish Balay uik[23]= -(d[3]*u[20] + d[8]*u[21] + d[13]*u[22] + d[18]*u[23] + d[23]*u[24]); 89*81278733SSatish Balay uik[24]= -(d[4]*u[20] + d[9]*u[21] + d[14]*u[22] + d[19]*u[23] + d[24]*u[24]); 90*81278733SSatish Balay 91*81278733SSatish Balay 92*81278733SSatish Balay /* update D(k) += -U(i,k)^T * U_bar(i,k) */ 93*81278733SSatish Balay dk[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3] + uik[4]*u[4]; 94*81278733SSatish Balay dk[1] += uik[5]*u[0] + uik[6]*u[1] + uik[7]*u[2] + uik[8]*u[3] + uik[9]*u[4]; 95*81278733SSatish Balay dk[2] += uik[10]*u[0]+ uik[11]*u[1]+ uik[12]*u[2]+ uik[13]*u[3]+ uik[14]*u[4]; 96*81278733SSatish Balay dk[3] += uik[15]*u[0]+ uik[16]*u[1]+ uik[17]*u[2]+ uik[18]*u[3]+ uik[19]*u[4]; 97*81278733SSatish Balay dk[4] += uik[20]*u[0]+ uik[21]*u[1]+ uik[22]*u[2]+ uik[23]*u[3]+ uik[24]*u[4]; 98*81278733SSatish Balay 99*81278733SSatish Balay dk[5] += uik[0]*u[5] + uik[1]*u[6] + uik[2]*u[7] + uik[3]*u[8] + uik[4]*u[9]; 100*81278733SSatish Balay dk[6] += uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7] + uik[8]*u[8] + uik[9]*u[9]; 101*81278733SSatish Balay dk[7] += uik[10]*u[5]+ uik[11]*u[6]+ uik[12]*u[7]+ uik[13]*u[8]+ uik[14]*u[9]; 102*81278733SSatish Balay dk[8] += uik[15]*u[5]+ uik[16]*u[6]+ uik[17]*u[7]+ uik[18]*u[8]+ uik[19]*u[9]; 103*81278733SSatish Balay dk[9] += uik[20]*u[5]+ uik[21]*u[6]+ uik[22]*u[7]+ uik[23]*u[8]+ uik[24]*u[9]; 104*81278733SSatish Balay 105*81278733SSatish Balay dk[10] += uik[0]*u[10] + uik[1]*u[11] + uik[2]*u[12] + uik[3]*u[13] + uik[4]*u[14]; 106*81278733SSatish Balay dk[11] += uik[5]*u[10] + uik[6]*u[11] + uik[7]*u[12] + uik[8]*u[13] + uik[9]*u[14]; 107*81278733SSatish Balay dk[12] += uik[10]*u[10]+ uik[11]*u[11]+ uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]; 108*81278733SSatish Balay dk[13] += uik[15]*u[10]+ uik[16]*u[11]+ uik[17]*u[12]+ uik[18]*u[13]+ uik[19]*u[14]; 109*81278733SSatish Balay dk[14] += uik[20]*u[10]+ uik[21]*u[11]+ uik[22]*u[12]+ uik[23]*u[13]+ uik[24]*u[14]; 110*81278733SSatish Balay 111*81278733SSatish Balay dk[15] += uik[0]*u[15] + uik[1]*u[16] + uik[2]*u[17] + uik[3]*u[18] + uik[4]*u[19]; 112*81278733SSatish Balay dk[16] += uik[5]*u[15] + uik[6]*u[16] + uik[7]*u[17] + uik[8]*u[18] + uik[9]*u[19]; 113*81278733SSatish Balay dk[17] += uik[10]*u[15]+ uik[11]*u[16]+ uik[12]*u[17]+ uik[13]*u[18]+ uik[14]*u[19]; 114*81278733SSatish Balay dk[18] += uik[15]*u[15]+ uik[16]*u[16]+ uik[17]*u[17]+ uik[18]*u[18]+ uik[19]*u[19]; 115*81278733SSatish Balay dk[19] += uik[20]*u[15]+ uik[21]*u[16]+ uik[22]*u[17]+ uik[23]*u[18]+ uik[24]*u[19]; 116*81278733SSatish Balay 117*81278733SSatish Balay dk[20] += uik[0]*u[20] + uik[1]*u[21] + uik[2]*u[22] + uik[3]*u[23] + uik[4]*u[24]; 118*81278733SSatish Balay dk[21] += uik[5]*u[20] + uik[6]*u[21] + uik[7]*u[22] + uik[8]*u[23] + uik[9]*u[24]; 119*81278733SSatish Balay dk[22] += uik[10]*u[20]+ uik[11]*u[21]+ uik[12]*u[22]+ uik[13]*u[23]+ uik[14]*u[24]; 120*81278733SSatish Balay dk[23] += uik[15]*u[20]+ uik[16]*u[21]+ uik[17]*u[22]+ uik[18]*u[23]+ uik[19]*u[24]; 121*81278733SSatish Balay dk[24] += uik[20]*u[20]+ uik[21]*u[21]+ uik[22]*u[22]+ uik[23]*u[23]+ uik[24]*u[24]; 122*81278733SSatish Balay 123*81278733SSatish Balay /* update -U(i,k) */ 124*81278733SSatish Balay ierr = PetscMemcpy(ba+ili*25,uik,25*sizeof(MatScalar));CHKERRQ(ierr); 125*81278733SSatish Balay 126*81278733SSatish Balay /* add multiple of row i to k-th row ... */ 127*81278733SSatish Balay jmin = ili + 1; jmax = bi[i+1]; 128*81278733SSatish Balay if (jmin < jmax){ 129*81278733SSatish Balay for (j=jmin; j<jmax; j++) { 130*81278733SSatish Balay /* rtmp += -U(i,k)^T * U_bar(i,j) */ 131*81278733SSatish Balay rtmp_ptr = rtmp + bj[j]*25; 132*81278733SSatish Balay u = ba + j*25; 133*81278733SSatish Balay rtmp_ptr[0] += uik[0]*u[0] + uik[1]*u[1] + uik[2]*u[2] + uik[3]*u[3] + uik[4]*u[4]; 134*81278733SSatish Balay rtmp_ptr[1] += uik[5]*u[0] + uik[6]*u[1] + uik[7]*u[2] + uik[8]*u[3] + uik[9]*u[4]; 135*81278733SSatish Balay rtmp_ptr[2] += uik[10]*u[0]+ uik[11]*u[1]+ uik[12]*u[2]+ uik[13]*u[3]+ uik[14]*u[4]; 136*81278733SSatish Balay rtmp_ptr[3] += uik[15]*u[0]+ uik[16]*u[1]+ uik[17]*u[2]+ uik[18]*u[3]+ uik[19]*u[4]; 137*81278733SSatish Balay rtmp_ptr[4] += uik[20]*u[0]+ uik[21]*u[1]+ uik[22]*u[2]+ uik[23]*u[3]+ uik[24]*u[4]; 138*81278733SSatish Balay 139*81278733SSatish Balay rtmp_ptr[5] += uik[0]*u[5] + uik[1]*u[6] + uik[2]*u[7] + uik[3]*u[8] + uik[4]*u[9]; 140*81278733SSatish Balay rtmp_ptr[6] += uik[5]*u[5] + uik[6]*u[6] + uik[7]*u[7] + uik[8]*u[8] + uik[9]*u[9]; 141*81278733SSatish Balay rtmp_ptr[7] += uik[10]*u[5]+ uik[11]*u[6]+ uik[12]*u[7]+ uik[13]*u[8]+ uik[14]*u[9]; 142*81278733SSatish Balay rtmp_ptr[8] += uik[15]*u[5]+ uik[16]*u[6]+ uik[17]*u[7]+ uik[18]*u[8]+ uik[19]*u[9]; 143*81278733SSatish Balay rtmp_ptr[9] += uik[20]*u[5]+ uik[21]*u[6]+ uik[22]*u[7]+ uik[23]*u[8]+ uik[24]*u[9]; 144*81278733SSatish Balay 145*81278733SSatish Balay rtmp_ptr[10] += uik[0]*u[10] + uik[1]*u[11] + uik[2]*u[12] + uik[3]*u[13] + uik[4]*u[14]; 146*81278733SSatish Balay rtmp_ptr[11] += uik[5]*u[10] + uik[6]*u[11] + uik[7]*u[12] + uik[8]*u[13] + uik[9]*u[14]; 147*81278733SSatish Balay rtmp_ptr[12] += uik[10]*u[10]+ uik[11]*u[11]+ uik[12]*u[12]+ uik[13]*u[13]+ uik[14]*u[14]; 148*81278733SSatish Balay rtmp_ptr[13] += uik[15]*u[10]+ uik[16]*u[11]+ uik[17]*u[12]+ uik[18]*u[13]+ uik[19]*u[14]; 149*81278733SSatish Balay rtmp_ptr[14] += uik[20]*u[10]+ uik[21]*u[11]+ uik[22]*u[12]+ uik[23]*u[13]+ uik[24]*u[14]; 150*81278733SSatish Balay 151*81278733SSatish Balay rtmp_ptr[15] += uik[0]*u[15] + uik[1]*u[16] + uik[2]*u[17] + uik[3]*u[18] + uik[4]*u[19]; 152*81278733SSatish Balay rtmp_ptr[16] += uik[5]*u[15] + uik[6]*u[16] + uik[7]*u[17] + uik[8]*u[18] + uik[9]*u[19]; 153*81278733SSatish Balay rtmp_ptr[17] += uik[10]*u[15]+ uik[11]*u[16]+ uik[12]*u[17]+ uik[13]*u[18]+ uik[14]*u[19]; 154*81278733SSatish Balay rtmp_ptr[18] += uik[15]*u[15]+ uik[16]*u[16]+ uik[17]*u[17]+ uik[18]*u[18]+ uik[19]*u[19]; 155*81278733SSatish Balay rtmp_ptr[19] += uik[20]*u[15]+ uik[21]*u[16]+ uik[22]*u[17]+ uik[23]*u[18]+ uik[24]*u[19]; 156*81278733SSatish Balay 157*81278733SSatish Balay rtmp_ptr[20] += uik[0]*u[20] + uik[1]*u[21] + uik[2]*u[22] + uik[3]*u[23] + uik[4]*u[24]; 158*81278733SSatish Balay rtmp_ptr[21] += uik[5]*u[20] + uik[6]*u[21] + uik[7]*u[22] + uik[8]*u[23] + uik[9]*u[24]; 159*81278733SSatish Balay rtmp_ptr[22] += uik[10]*u[20]+ uik[11]*u[21]+ uik[12]*u[22]+ uik[13]*u[23]+ uik[14]*u[24]; 160*81278733SSatish Balay rtmp_ptr[23] += uik[15]*u[20]+ uik[16]*u[21]+ uik[17]*u[22]+ uik[18]*u[23]+ uik[19]*u[24]; 161*81278733SSatish Balay rtmp_ptr[24] += uik[20]*u[20]+ uik[21]*u[21]+ uik[22]*u[22]+ uik[23]*u[23]+ uik[24]*u[24]; 162*81278733SSatish Balay } 163*81278733SSatish Balay 164*81278733SSatish Balay /* ... add i to row list for next nonzero entry */ 165*81278733SSatish Balay il[i] = jmin; /* update il(i) in column k+1, ... mbs-1 */ 166*81278733SSatish Balay j = bj[jmin]; 167*81278733SSatish Balay jl[i] = jl[j]; jl[j] = i; /* update jl */ 168*81278733SSatish Balay } 169*81278733SSatish Balay i = nexti; 170*81278733SSatish Balay } 171*81278733SSatish Balay 172*81278733SSatish Balay /* save nonzero entries in k-th row of U ... */ 173*81278733SSatish Balay 174*81278733SSatish Balay /* invert diagonal block */ 175*81278733SSatish Balay d = ba+k*25; 176*81278733SSatish Balay ierr = PetscMemcpy(d,dk,25*sizeof(MatScalar));CHKERRQ(ierr); 177*81278733SSatish Balay ierr = Kernel_A_gets_inverse_A_5(d);CHKERRQ(ierr); 178*81278733SSatish Balay 179*81278733SSatish Balay jmin = bi[k]; jmax = bi[k+1]; 180*81278733SSatish Balay if (jmin < jmax) { 181*81278733SSatish Balay for (j=jmin; j<jmax; j++){ 182*81278733SSatish Balay vj = bj[j]; /* block col. index of U */ 183*81278733SSatish Balay u = ba + j*25; 184*81278733SSatish Balay rtmp_ptr = rtmp + vj*25; 185*81278733SSatish Balay for (k1=0; k1<25; k1++){ 186*81278733SSatish Balay *u++ = *rtmp_ptr; 187*81278733SSatish Balay *rtmp_ptr++ = 0.0; 188*81278733SSatish Balay } 189*81278733SSatish Balay } 190*81278733SSatish Balay 191*81278733SSatish Balay /* ... add k to row list for first nonzero entry in k-th row */ 192*81278733SSatish Balay il[k] = jmin; 193*81278733SSatish Balay i = bj[jmin]; 194*81278733SSatish Balay jl[k] = jl[i]; jl[i] = k; 195*81278733SSatish Balay } 196*81278733SSatish Balay } 197*81278733SSatish Balay 198*81278733SSatish Balay ierr = PetscFree(rtmp);CHKERRQ(ierr); 199*81278733SSatish Balay ierr = PetscFree(il);CHKERRQ(ierr); 200*81278733SSatish Balay ierr = PetscFree(dk);CHKERRQ(ierr); 201*81278733SSatish Balay 202*81278733SSatish Balay C->factor = FACTOR_CHOLESKY; 203*81278733SSatish Balay C->assembled = PETSC_TRUE; 204*81278733SSatish Balay C->preallocated = PETSC_TRUE; 205*81278733SSatish Balay PetscLogFlops(1.3333*125*b->mbs); /* from inverting diagonal blocks */ 206*81278733SSatish Balay PetscFunctionReturn(0); 207*81278733SSatish Balay } 208