1d24d4204SJose E. Roman #include <petsc/private/petscscalapack.h> /*I "petscmat.h" I*/ 2d24d4204SJose E. Roman 3d24d4204SJose E. Roman #define DEFAULT_BLOCKSIZE 64 4d24d4204SJose E. Roman 5d24d4204SJose E. Roman /* 6d24d4204SJose E. Roman The variable Petsc_ScaLAPACK_keyval is used to indicate an MPI attribute that 7d24d4204SJose E. Roman is attached to a communicator, in this case the attribute is a Mat_ScaLAPACK_Grid 8d24d4204SJose E. Roman */ 9d24d4204SJose E. Roman static PetscMPIInt Petsc_ScaLAPACK_keyval = MPI_KEYVAL_INVALID; 10d24d4204SJose E. Roman 11*f7ec113fSDamian Marek static PetscErrorCode Petsc_ScaLAPACK_keyval_free(void) 12*f7ec113fSDamian Marek { 13*f7ec113fSDamian Marek PetscErrorCode ierr; 14*f7ec113fSDamian Marek 15*f7ec113fSDamian Marek PetscFunctionBegin; 16*f7ec113fSDamian Marek ierr = PetscInfo(NULL,"Freeing Petsc_ScaLAPACK_keyval\n");CHKERRQ(ierr); 17*f7ec113fSDamian Marek ierr = MPI_Comm_free_keyval(&Petsc_ScaLAPACK_keyval);CHKERRQ(ierr); 18*f7ec113fSDamian Marek PetscFunctionReturn(0); 19*f7ec113fSDamian Marek } 20*f7ec113fSDamian Marek 21d24d4204SJose E. Roman static PetscErrorCode MatView_ScaLAPACK(Mat A,PetscViewer viewer) 22d24d4204SJose E. Roman { 23d24d4204SJose E. Roman PetscErrorCode ierr; 24d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 25d24d4204SJose E. Roman PetscBool iascii; 26d24d4204SJose E. Roman PetscViewerFormat format; 27d24d4204SJose E. Roman Mat Adense; 28d24d4204SJose E. Roman 29d24d4204SJose E. Roman PetscFunctionBegin; 30d24d4204SJose E. Roman ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 31d24d4204SJose E. Roman if (iascii) { 32d24d4204SJose E. Roman ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 33d24d4204SJose E. Roman if (format == PETSC_VIEWER_ASCII_INFO || format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 34d24d4204SJose E. Roman ierr = PetscViewerASCIIPrintf(viewer,"block sizes: %d,%d\n",(int)a->mb,(int)a->nb);CHKERRQ(ierr); 35d24d4204SJose E. Roman ierr = PetscViewerASCIIPrintf(viewer,"grid height=%d, grid width=%d\n",(int)a->grid->nprow,(int)a->grid->npcol);CHKERRQ(ierr); 36d24d4204SJose E. Roman ierr = PetscViewerASCIIPrintf(viewer,"coordinates of process owning first row and column: (%d,%d)\n",(int)a->rsrc,(int)a->csrc);CHKERRQ(ierr); 37d24d4204SJose E. Roman ierr = PetscViewerASCIIPrintf(viewer,"dimension of largest local matrix: %d x %d\n",(int)a->locr,(int)a->locc);CHKERRQ(ierr); 38d24d4204SJose E. Roman PetscFunctionReturn(0); 39d24d4204SJose E. Roman } else if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) { 40d24d4204SJose E. Roman PetscFunctionReturn(0); 41d24d4204SJose E. Roman } 42d24d4204SJose E. Roman } 43d24d4204SJose E. Roman /* convert to dense format and call MatView() */ 44d24d4204SJose E. Roman ierr = MatConvert(A,MATDENSE,MAT_INITIAL_MATRIX,&Adense);CHKERRQ(ierr); 45d24d4204SJose E. Roman ierr = MatView(Adense,viewer);CHKERRQ(ierr); 46d24d4204SJose E. Roman ierr = MatDestroy(&Adense);CHKERRQ(ierr); 47d24d4204SJose E. Roman PetscFunctionReturn(0); 48d24d4204SJose E. Roman } 49d24d4204SJose E. Roman 50d24d4204SJose E. Roman static PetscErrorCode MatGetInfo_ScaLAPACK(Mat A,MatInfoType flag,MatInfo *info) 51d24d4204SJose E. Roman { 52d24d4204SJose E. Roman PetscErrorCode ierr; 53d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 54d24d4204SJose E. Roman PetscLogDouble isend[2],irecv[2]; 55d24d4204SJose E. Roman 56d24d4204SJose E. Roman PetscFunctionBegin; 57d24d4204SJose E. Roman info->block_size = 1.0; 58d24d4204SJose E. Roman 59d24d4204SJose E. Roman isend[0] = a->lld*a->locc; /* locally allocated */ 60d24d4204SJose E. Roman isend[1] = a->locr*a->locc; /* used submatrix */ 61d24d4204SJose E. Roman if (flag == MAT_LOCAL || flag == MAT_GLOBAL_MAX) { 62d24d4204SJose E. Roman info->nz_allocated = isend[0]; 63d24d4204SJose E. Roman info->nz_used = isend[1]; 64d24d4204SJose E. Roman } else if (flag == MAT_GLOBAL_MAX) { 65d24d4204SJose E. Roman ierr = MPIU_Allreduce(isend,irecv,2,MPIU_PETSCLOGDOUBLE,MPIU_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr); 66d24d4204SJose E. Roman info->nz_allocated = irecv[0]; 67d24d4204SJose E. Roman info->nz_used = irecv[1]; 68d24d4204SJose E. Roman } else if (flag == MAT_GLOBAL_SUM) { 69d24d4204SJose E. Roman ierr = MPIU_Allreduce(isend,irecv,2,MPIU_PETSCLOGDOUBLE,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr); 70d24d4204SJose E. Roman info->nz_allocated = irecv[0]; 71d24d4204SJose E. Roman info->nz_used = irecv[1]; 72d24d4204SJose E. Roman } 73d24d4204SJose E. Roman 74d24d4204SJose E. Roman info->nz_unneeded = 0; 75d24d4204SJose E. Roman info->assemblies = A->num_ass; 76d24d4204SJose E. Roman info->mallocs = 0; 77d24d4204SJose E. Roman info->memory = ((PetscObject)A)->mem; 78d24d4204SJose E. Roman info->fill_ratio_given = 0; 79d24d4204SJose E. Roman info->fill_ratio_needed = 0; 80d24d4204SJose E. Roman info->factor_mallocs = 0; 81d24d4204SJose E. Roman PetscFunctionReturn(0); 82d24d4204SJose E. Roman } 83d24d4204SJose E. Roman 84d24d4204SJose E. Roman PetscErrorCode MatSetOption_ScaLAPACK(Mat A,MatOption op,PetscBool flg) 85d24d4204SJose E. Roman { 86d24d4204SJose E. Roman PetscFunctionBegin; 87d24d4204SJose E. Roman switch (op) { 88d24d4204SJose E. Roman case MAT_NEW_NONZERO_LOCATIONS: 89d24d4204SJose E. Roman case MAT_NEW_NONZERO_LOCATION_ERR: 90d24d4204SJose E. Roman case MAT_NEW_NONZERO_ALLOCATION_ERR: 91d24d4204SJose E. Roman case MAT_SYMMETRIC: 92d24d4204SJose E. Roman case MAT_SORTED_FULL: 93d24d4204SJose E. Roman case MAT_HERMITIAN: 94d24d4204SJose E. Roman break; 95d24d4204SJose E. Roman default: 96d24d4204SJose E. Roman SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unsupported option %s",MatOptions[op]); 97d24d4204SJose E. Roman } 98d24d4204SJose E. Roman PetscFunctionReturn(0); 99d24d4204SJose E. Roman } 100d24d4204SJose E. Roman 101d24d4204SJose E. Roman static PetscErrorCode MatSetValues_ScaLAPACK(Mat A,PetscInt nr,const PetscInt *rows,PetscInt nc,const PetscInt *cols,const PetscScalar *vals,InsertMode imode) 102d24d4204SJose E. Roman { 103d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 104d24d4204SJose E. Roman PetscErrorCode ierr; 105d24d4204SJose E. Roman PetscInt i,j; 106d24d4204SJose E. Roman PetscBLASInt gridx,gcidx,lridx,lcidx,rsrc,csrc; 107d24d4204SJose E. Roman 108d24d4204SJose E. Roman PetscFunctionBegin; 109d24d4204SJose E. Roman for (i=0;i<nr;i++) { 110d24d4204SJose E. Roman if (rows[i] < 0) continue; 111d24d4204SJose E. Roman ierr = PetscBLASIntCast(rows[i]+1,&gridx);CHKERRQ(ierr); 112d24d4204SJose E. Roman for (j=0;j<nc;j++) { 113d24d4204SJose E. Roman if (cols[j] < 0) continue; 114d24d4204SJose E. Roman ierr = PetscBLASIntCast(cols[j]+1,&gcidx);CHKERRQ(ierr); 115d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKinfog2l",SCALAPACKinfog2l_(&gridx,&gcidx,a->desc,&a->grid->nprow,&a->grid->npcol,&a->grid->myrow,&a->grid->mycol,&lridx,&lcidx,&rsrc,&csrc)); 116d24d4204SJose E. Roman if (rsrc==a->grid->myrow && csrc==a->grid->mycol) { 117d24d4204SJose E. Roman switch (imode) { 118d24d4204SJose E. Roman case INSERT_VALUES: a->loc[lridx-1+(lcidx-1)*a->lld] = vals[i*nc+j]; break; 119d24d4204SJose E. Roman case ADD_VALUES: a->loc[lridx-1+(lcidx-1)*a->lld] += vals[i*nc+j]; break; 120d24d4204SJose E. Roman default: SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for InsertMode %d",(int)imode); 121d24d4204SJose E. Roman } 122d24d4204SJose E. Roman } else { 123d24d4204SJose E. Roman if (A->nooffprocentries) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Setting off process entry even though MatSetOption(,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) was set"); 124d24d4204SJose E. Roman A->assembled = PETSC_FALSE; 125d24d4204SJose E. Roman ierr = MatStashValuesRow_Private(&A->stash,rows[i],1,cols+j,vals+i*nc+j,(PetscBool)(imode==ADD_VALUES));CHKERRQ(ierr); 126d24d4204SJose E. Roman } 127d24d4204SJose E. Roman } 128d24d4204SJose E. Roman } 129d24d4204SJose E. Roman PetscFunctionReturn(0); 130d24d4204SJose E. Roman } 131d24d4204SJose E. Roman 132d24d4204SJose E. Roman static PetscErrorCode MatMultXXXYYY_ScaLAPACK(Mat A,PetscBool transpose,PetscScalar beta,const PetscScalar *x,PetscScalar *y) 133d24d4204SJose E. Roman { 134d24d4204SJose E. Roman PetscErrorCode ierr; 135d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 136d24d4204SJose E. Roman PetscScalar *x2d,*y2d,alpha=1.0; 137d24d4204SJose E. Roman const PetscInt *ranges; 138d24d4204SJose E. Roman PetscBLASInt xdesc[9],ydesc[9],x2desc[9],y2desc[9],mb,nb,lszx,lszy,zero=0,one=1,xlld,ylld,info; 139d24d4204SJose E. Roman 140d24d4204SJose E. Roman PetscFunctionBegin; 141d24d4204SJose E. Roman if (transpose) { 142d24d4204SJose E. Roman 143d24d4204SJose E. Roman /* create ScaLAPACK descriptors for vectors (1d block distribution) */ 144d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->rmap,&ranges);CHKERRQ(ierr); 145d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&mb);CHKERRQ(ierr); /* x block size */ 146d24d4204SJose E. Roman xlld = PetscMax(1,A->rmap->n); 147d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(xdesc,&a->M,&one,&mb,&one,&zero,&zero,&a->grid->ictxcol,&xlld,&info)); 148d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 149d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->cmap,&ranges);CHKERRQ(ierr); 150d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&nb);CHKERRQ(ierr); /* y block size */ 151d24d4204SJose E. Roman ylld = 1; 152d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(ydesc,&one,&a->N,&one,&nb,&zero,&zero,&a->grid->ictxrow,&ylld,&info)); 153d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 154d24d4204SJose E. Roman 155d24d4204SJose E. Roman /* allocate 2d vectors */ 156d24d4204SJose E. Roman lszx = SCALAPACKnumroc_(&a->M,&a->mb,&a->grid->myrow,&a->rsrc,&a->grid->nprow); 157d24d4204SJose E. Roman lszy = SCALAPACKnumroc_(&a->N,&a->nb,&a->grid->mycol,&a->csrc,&a->grid->npcol); 158d24d4204SJose E. Roman ierr = PetscMalloc2(lszx,&x2d,lszy,&y2d);CHKERRQ(ierr); 159d24d4204SJose E. Roman xlld = PetscMax(1,lszx); 160d24d4204SJose E. Roman 161d24d4204SJose E. Roman /* create ScaLAPACK descriptors for vectors (2d block distribution) */ 162d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(x2desc,&a->M,&one,&a->mb,&one,&zero,&zero,&a->grid->ictxt,&xlld,&info)); 163d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 164d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(y2desc,&one,&a->N,&one,&a->nb,&zero,&zero,&a->grid->ictxt,&ylld,&info)); 165d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 166d24d4204SJose E. Roman 167d24d4204SJose E. Roman /* redistribute x as a column of a 2d matrix */ 168d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&one,(PetscScalar*)x,&one,&one,xdesc,x2d,&one,&one,x2desc,&a->grid->ictxcol)); 169d24d4204SJose E. Roman 170d24d4204SJose E. Roman /* redistribute y as a row of a 2d matrix */ 171d24d4204SJose E. Roman if (beta!=0.0) PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&one,&a->N,y,&one,&one,ydesc,y2d,&one,&one,y2desc,&a->grid->ictxrow)); 172d24d4204SJose E. Roman 173d24d4204SJose E. Roman /* call PBLAS subroutine */ 174d24d4204SJose E. Roman PetscStackCallBLAS("PBLASgemv",PBLASgemv_("T",&a->M,&a->N,&alpha,a->loc,&one,&one,a->desc,x2d,&one,&one,x2desc,&one,&beta,y2d,&one,&one,y2desc,&one)); 175d24d4204SJose E. Roman 176d24d4204SJose E. Roman /* redistribute y from a row of a 2d matrix */ 177d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&one,&a->N,y2d,&one,&one,y2desc,y,&one,&one,ydesc,&a->grid->ictxrow)); 178d24d4204SJose E. Roman 179d24d4204SJose E. Roman } else { /* non-transpose */ 180d24d4204SJose E. Roman 181d24d4204SJose E. Roman /* create ScaLAPACK descriptors for vectors (1d block distribution) */ 182d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->cmap,&ranges);CHKERRQ(ierr); 183d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&nb);CHKERRQ(ierr); /* x block size */ 184d24d4204SJose E. Roman xlld = 1; 185d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(xdesc,&one,&a->N,&one,&nb,&zero,&zero,&a->grid->ictxrow,&xlld,&info)); 186d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 187d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->rmap,&ranges);CHKERRQ(ierr); 188d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&mb);CHKERRQ(ierr); /* y block size */ 189d24d4204SJose E. Roman ylld = PetscMax(1,A->rmap->n); 190d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(ydesc,&a->M,&one,&mb,&one,&zero,&zero,&a->grid->ictxcol,&ylld,&info)); 191d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 192d24d4204SJose E. Roman 193d24d4204SJose E. Roman /* allocate 2d vectors */ 194d24d4204SJose E. Roman lszy = SCALAPACKnumroc_(&a->M,&a->mb,&a->grid->myrow,&a->rsrc,&a->grid->nprow); 195d24d4204SJose E. Roman lszx = SCALAPACKnumroc_(&a->N,&a->nb,&a->grid->mycol,&a->csrc,&a->grid->npcol); 196d24d4204SJose E. Roman ierr = PetscMalloc2(lszx,&x2d,lszy,&y2d);CHKERRQ(ierr); 197d24d4204SJose E. Roman ylld = PetscMax(1,lszy); 198d24d4204SJose E. Roman 199d24d4204SJose E. Roman /* create ScaLAPACK descriptors for vectors (2d block distribution) */ 200d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(x2desc,&one,&a->N,&one,&a->nb,&zero,&zero,&a->grid->ictxt,&xlld,&info)); 201d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 202d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(y2desc,&a->M,&one,&a->mb,&one,&zero,&zero,&a->grid->ictxt,&ylld,&info)); 203d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 204d24d4204SJose E. Roman 205d24d4204SJose E. Roman /* redistribute x as a row of a 2d matrix */ 206d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&one,&a->N,(PetscScalar*)x,&one,&one,xdesc,x2d,&one,&one,x2desc,&a->grid->ictxrow)); 207d24d4204SJose E. Roman 208d24d4204SJose E. Roman /* redistribute y as a column of a 2d matrix */ 209d24d4204SJose E. Roman if (beta!=0.0) PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&one,y,&one,&one,ydesc,y2d,&one,&one,y2desc,&a->grid->ictxcol)); 210d24d4204SJose E. Roman 211d24d4204SJose E. Roman /* call PBLAS subroutine */ 212d24d4204SJose E. Roman PetscStackCallBLAS("PBLASgemv",PBLASgemv_("N",&a->M,&a->N,&alpha,a->loc,&one,&one,a->desc,x2d,&one,&one,x2desc,&one,&beta,y2d,&one,&one,y2desc,&one)); 213d24d4204SJose E. Roman 214d24d4204SJose E. Roman /* redistribute y from a column of a 2d matrix */ 215d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&one,y2d,&one,&one,y2desc,y,&one,&one,ydesc,&a->grid->ictxcol)); 216d24d4204SJose E. Roman 217d24d4204SJose E. Roman } 218d24d4204SJose E. Roman ierr = PetscFree2(x2d,y2d);CHKERRQ(ierr); 219d24d4204SJose E. Roman PetscFunctionReturn(0); 220d24d4204SJose E. Roman } 221d24d4204SJose E. Roman 222d24d4204SJose E. Roman static PetscErrorCode MatMult_ScaLAPACK(Mat A,Vec x,Vec y) 223d24d4204SJose E. Roman { 224d24d4204SJose E. Roman PetscErrorCode ierr; 225d24d4204SJose E. Roman const PetscScalar *xarray; 226d24d4204SJose E. Roman PetscScalar *yarray; 227d24d4204SJose E. Roman 228d24d4204SJose E. Roman PetscFunctionBegin; 229d24d4204SJose E. Roman ierr = VecGetArrayRead(x,&xarray);CHKERRQ(ierr); 230d24d4204SJose E. Roman ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 231d24d4204SJose E. Roman ierr = MatMultXXXYYY_ScaLAPACK(A,PETSC_FALSE,0.0,xarray,yarray);CHKERRQ(ierr); 232d24d4204SJose E. Roman ierr = VecRestoreArrayRead(x,&xarray);CHKERRQ(ierr); 233d24d4204SJose E. Roman ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 234d24d4204SJose E. Roman PetscFunctionReturn(0); 235d24d4204SJose E. Roman } 236d24d4204SJose E. Roman 237d24d4204SJose E. Roman static PetscErrorCode MatMultTranspose_ScaLAPACK(Mat A,Vec x,Vec y) 238d24d4204SJose E. Roman { 239d24d4204SJose E. Roman PetscErrorCode ierr; 240d24d4204SJose E. Roman const PetscScalar *xarray; 241d24d4204SJose E. Roman PetscScalar *yarray; 242d24d4204SJose E. Roman 243d24d4204SJose E. Roman PetscFunctionBegin; 244d24d4204SJose E. Roman ierr = VecGetArrayRead(x,&xarray);CHKERRQ(ierr); 245d24d4204SJose E. Roman ierr = VecGetArray(y,&yarray);CHKERRQ(ierr); 246d24d4204SJose E. Roman ierr = MatMultXXXYYY_ScaLAPACK(A,PETSC_TRUE,0.0,xarray,yarray);CHKERRQ(ierr); 247d24d4204SJose E. Roman ierr = VecRestoreArrayRead(x,&xarray);CHKERRQ(ierr); 248d24d4204SJose E. Roman ierr = VecRestoreArray(y,&yarray);CHKERRQ(ierr); 249d24d4204SJose E. Roman PetscFunctionReturn(0); 250d24d4204SJose E. Roman } 251d24d4204SJose E. Roman 252d24d4204SJose E. Roman static PetscErrorCode MatMultAdd_ScaLAPACK(Mat A,Vec x,Vec y,Vec z) 253d24d4204SJose E. Roman { 254d24d4204SJose E. Roman PetscErrorCode ierr; 255d24d4204SJose E. Roman const PetscScalar *xarray; 256d24d4204SJose E. Roman PetscScalar *zarray; 257d24d4204SJose E. Roman 258d24d4204SJose E. Roman PetscFunctionBegin; 259d24d4204SJose E. Roman if (y != z) { ierr = VecCopy(y,z);CHKERRQ(ierr); } 260d24d4204SJose E. Roman ierr = VecGetArrayRead(x,&xarray);CHKERRQ(ierr); 261d24d4204SJose E. Roman ierr = VecGetArray(z,&zarray);CHKERRQ(ierr); 262d24d4204SJose E. Roman ierr = MatMultXXXYYY_ScaLAPACK(A,PETSC_FALSE,1.0,xarray,zarray);CHKERRQ(ierr); 263d24d4204SJose E. Roman ierr = VecRestoreArrayRead(x,&xarray);CHKERRQ(ierr); 264d24d4204SJose E. Roman ierr = VecRestoreArray(z,&zarray);CHKERRQ(ierr); 265d24d4204SJose E. Roman PetscFunctionReturn(0); 266d24d4204SJose E. Roman } 267d24d4204SJose E. Roman 268d24d4204SJose E. Roman static PetscErrorCode MatMultTransposeAdd_ScaLAPACK(Mat A,Vec x,Vec y,Vec z) 269d24d4204SJose E. Roman { 270d24d4204SJose E. Roman PetscErrorCode ierr; 271d24d4204SJose E. Roman const PetscScalar *xarray; 272d24d4204SJose E. Roman PetscScalar *zarray; 273d24d4204SJose E. Roman 274d24d4204SJose E. Roman PetscFunctionBegin; 275d24d4204SJose E. Roman if (y != z) { ierr = VecCopy(y,z);CHKERRQ(ierr); } 276d24d4204SJose E. Roman ierr = VecGetArrayRead(x,&xarray);CHKERRQ(ierr); 277d24d4204SJose E. Roman ierr = VecGetArray(z,&zarray);CHKERRQ(ierr); 278d24d4204SJose E. Roman ierr = MatMultXXXYYY_ScaLAPACK(A,PETSC_TRUE,1.0,xarray,zarray);CHKERRQ(ierr); 279d24d4204SJose E. Roman ierr = VecRestoreArrayRead(x,&xarray);CHKERRQ(ierr); 280d24d4204SJose E. Roman ierr = VecRestoreArray(z,&zarray);CHKERRQ(ierr); 281d24d4204SJose E. Roman PetscFunctionReturn(0); 282d24d4204SJose E. Roman } 283d24d4204SJose E. Roman 284d24d4204SJose E. Roman PetscErrorCode MatMatMultNumeric_ScaLAPACK(Mat A,Mat B,Mat C) 285d24d4204SJose E. Roman { 286d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 287d24d4204SJose E. Roman Mat_ScaLAPACK *b = (Mat_ScaLAPACK*)B->data; 288d24d4204SJose E. Roman Mat_ScaLAPACK *c = (Mat_ScaLAPACK*)C->data; 289d24d4204SJose E. Roman PetscScalar sone=1.0,zero=0.0; 290d24d4204SJose E. Roman PetscBLASInt one=1; 291d24d4204SJose E. Roman 292d24d4204SJose E. Roman PetscFunctionBegin; 293d24d4204SJose E. Roman PetscStackCallBLAS("PBLASgemm",PBLASgemm_("N","N",&a->M,&b->N,&a->N,&sone,a->loc,&one,&one,a->desc,b->loc,&one,&one,b->desc,&zero,c->loc,&one,&one,c->desc)); 294d24d4204SJose E. Roman C->assembled = PETSC_TRUE; 295d24d4204SJose E. Roman PetscFunctionReturn(0); 296d24d4204SJose E. Roman } 297d24d4204SJose E. Roman 298d24d4204SJose E. Roman PetscErrorCode MatMatMultSymbolic_ScaLAPACK(Mat A,Mat B,PetscReal fill,Mat C) 299d24d4204SJose E. Roman { 300d24d4204SJose E. Roman PetscErrorCode ierr; 301d24d4204SJose E. Roman 302d24d4204SJose E. Roman PetscFunctionBegin; 303d24d4204SJose E. Roman ierr = MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr); 304d24d4204SJose E. Roman ierr = MatSetType(C,MATSCALAPACK);CHKERRQ(ierr); 305d24d4204SJose E. Roman ierr = MatSetUp(C);CHKERRQ(ierr); 306d24d4204SJose E. Roman C->ops->matmultnumeric = MatMatMultNumeric_ScaLAPACK; 307d24d4204SJose E. Roman PetscFunctionReturn(0); 308d24d4204SJose E. Roman } 309d24d4204SJose E. Roman 310d24d4204SJose E. Roman static PetscErrorCode MatMatTransposeMultNumeric_ScaLAPACK(Mat A,Mat B,Mat C) 311d24d4204SJose E. Roman { 312d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 313d24d4204SJose E. Roman Mat_ScaLAPACK *b = (Mat_ScaLAPACK*)B->data; 314d24d4204SJose E. Roman Mat_ScaLAPACK *c = (Mat_ScaLAPACK*)C->data; 315d24d4204SJose E. Roman PetscScalar sone=1.0,zero=0.0; 316d24d4204SJose E. Roman PetscBLASInt one=1; 317d24d4204SJose E. Roman 318d24d4204SJose E. Roman PetscFunctionBegin; 319d24d4204SJose E. Roman PetscStackCallBLAS("PBLASgemm",PBLASgemm_("N","T",&a->M,&b->M,&a->N,&sone,a->loc,&one,&one,a->desc,b->loc,&one,&one,b->desc,&zero,c->loc,&one,&one,c->desc)); 320d24d4204SJose E. Roman C->assembled = PETSC_TRUE; 321d24d4204SJose E. Roman PetscFunctionReturn(0); 322d24d4204SJose E. Roman } 323d24d4204SJose E. Roman 324d24d4204SJose E. Roman static PetscErrorCode MatMatTransposeMultSymbolic_ScaLAPACK(Mat A,Mat B,PetscReal fill,Mat C) 325d24d4204SJose E. Roman { 326d24d4204SJose E. Roman PetscErrorCode ierr; 327d24d4204SJose E. Roman 328d24d4204SJose E. Roman PetscFunctionBegin; 329d24d4204SJose E. Roman ierr = MatSetSizes(C,A->rmap->n,B->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr); 330d24d4204SJose E. Roman ierr = MatSetType(C,MATSCALAPACK);CHKERRQ(ierr); 331d24d4204SJose E. Roman ierr = MatSetUp(C);CHKERRQ(ierr); 332d24d4204SJose E. Roman PetscFunctionReturn(0); 333d24d4204SJose E. Roman } 334d24d4204SJose E. Roman 335d24d4204SJose E. Roman /* --------------------------------------- */ 336d24d4204SJose E. Roman static PetscErrorCode MatProductSetFromOptions_ScaLAPACK_AB(Mat C) 337d24d4204SJose E. Roman { 338d24d4204SJose E. Roman PetscFunctionBegin; 339d24d4204SJose E. Roman C->ops->matmultsymbolic = MatMatMultSymbolic_ScaLAPACK; 340d24d4204SJose E. Roman C->ops->productsymbolic = MatProductSymbolic_AB; 341d24d4204SJose E. Roman PetscFunctionReturn(0); 342d24d4204SJose E. Roman } 343d24d4204SJose E. Roman 344d24d4204SJose E. Roman static PetscErrorCode MatProductSetFromOptions_ScaLAPACK_ABt(Mat C) 345d24d4204SJose E. Roman { 346d24d4204SJose E. Roman PetscFunctionBegin; 347d24d4204SJose E. Roman C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_ScaLAPACK; 348d24d4204SJose E. Roman C->ops->productsymbolic = MatProductSymbolic_ABt; 349d24d4204SJose E. Roman PetscFunctionReturn(0); 350d24d4204SJose E. Roman } 351d24d4204SJose E. Roman 352d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatProductSetFromOptions_ScaLAPACK(Mat C) 353d24d4204SJose E. Roman { 354d24d4204SJose E. Roman PetscErrorCode ierr; 355d24d4204SJose E. Roman Mat_Product *product = C->product; 356d24d4204SJose E. Roman 357d24d4204SJose E. Roman PetscFunctionBegin; 358d24d4204SJose E. Roman switch (product->type) { 359d24d4204SJose E. Roman case MATPRODUCT_AB: 360d24d4204SJose E. Roman ierr = MatProductSetFromOptions_ScaLAPACK_AB(C);CHKERRQ(ierr); 361d24d4204SJose E. Roman break; 362d24d4204SJose E. Roman case MATPRODUCT_ABt: 363d24d4204SJose E. Roman ierr = MatProductSetFromOptions_ScaLAPACK_ABt(C);CHKERRQ(ierr); 364d24d4204SJose E. Roman break; 365d24d4204SJose E. Roman default: SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_SUP,"MatProduct type %s is not supported for ScaLAPACK and ScaLAPACK matrices",MatProductTypes[product->type]); 366d24d4204SJose E. Roman } 367d24d4204SJose E. Roman PetscFunctionReturn(0); 368d24d4204SJose E. Roman } 369d24d4204SJose E. Roman /* --------------------------------------- */ 370d24d4204SJose E. Roman 371d24d4204SJose E. Roman static PetscErrorCode MatGetDiagonal_ScaLAPACK(Mat A,Vec D) 372d24d4204SJose E. Roman { 373d24d4204SJose E. Roman PetscErrorCode ierr; 374d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 375d24d4204SJose E. Roman PetscScalar *darray,*d2d,v; 376d24d4204SJose E. Roman const PetscInt *ranges; 377d24d4204SJose E. Roman PetscBLASInt j,ddesc[9],d2desc[9],mb,nb,lszd,zero=0,one=1,dlld,info; 378d24d4204SJose E. Roman 379d24d4204SJose E. Roman PetscFunctionBegin; 380d24d4204SJose E. Roman ierr = VecGetArray(D,&darray);CHKERRQ(ierr); 381d24d4204SJose E. Roman 382d24d4204SJose E. Roman if (A->rmap->N<=A->cmap->N) { /* row version */ 383d24d4204SJose E. Roman 384d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (1d block distribution) */ 385d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->rmap,&ranges);CHKERRQ(ierr); 386d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&mb);CHKERRQ(ierr); /* D block size */ 387d24d4204SJose E. Roman dlld = PetscMax(1,A->rmap->n); 388d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(ddesc,&a->M,&one,&mb,&one,&zero,&zero,&a->grid->ictxcol,&dlld,&info)); 389d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 390d24d4204SJose E. Roman 391d24d4204SJose E. Roman /* allocate 2d vector */ 392d24d4204SJose E. Roman lszd = SCALAPACKnumroc_(&a->M,&a->mb,&a->grid->myrow,&a->rsrc,&a->grid->nprow); 393d24d4204SJose E. Roman ierr = PetscCalloc1(lszd,&d2d);CHKERRQ(ierr); 394d24d4204SJose E. Roman dlld = PetscMax(1,lszd); 395d24d4204SJose E. Roman 396d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (2d block distribution) */ 397d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(d2desc,&a->M,&one,&a->mb,&one,&zero,&zero,&a->grid->ictxt,&dlld,&info)); 398d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 399d24d4204SJose E. Roman 400d24d4204SJose E. Roman /* collect diagonal */ 401d24d4204SJose E. Roman for (j=1;j<=a->M;j++) { 402d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKelget",SCALAPACKelget_("R"," ",&v,a->loc,&j,&j,a->desc)); 403d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKelset",SCALAPACKelset_(d2d,&j,&one,d2desc,&v)); 404d24d4204SJose E. Roman } 405d24d4204SJose E. Roman 406d24d4204SJose E. Roman /* redistribute d from a column of a 2d matrix */ 407d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&one,d2d,&one,&one,d2desc,darray,&one,&one,ddesc,&a->grid->ictxcol)); 408d24d4204SJose E. Roman ierr = PetscFree(d2d);CHKERRQ(ierr); 409d24d4204SJose E. Roman 410d24d4204SJose E. Roman } else { /* column version */ 411d24d4204SJose E. Roman 412d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (1d block distribution) */ 413d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->cmap,&ranges);CHKERRQ(ierr); 414d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&nb);CHKERRQ(ierr); /* D block size */ 415d24d4204SJose E. Roman dlld = 1; 416d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(ddesc,&one,&a->N,&one,&nb,&zero,&zero,&a->grid->ictxrow,&dlld,&info)); 417d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 418d24d4204SJose E. Roman 419d24d4204SJose E. Roman /* allocate 2d vector */ 420d24d4204SJose E. Roman lszd = SCALAPACKnumroc_(&a->N,&a->nb,&a->grid->mycol,&a->csrc,&a->grid->npcol); 421d24d4204SJose E. Roman ierr = PetscCalloc1(lszd,&d2d);CHKERRQ(ierr); 422d24d4204SJose E. Roman 423d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (2d block distribution) */ 424d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(d2desc,&one,&a->N,&one,&a->nb,&zero,&zero,&a->grid->ictxt,&dlld,&info)); 425d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 426d24d4204SJose E. Roman 427d24d4204SJose E. Roman /* collect diagonal */ 428d24d4204SJose E. Roman for (j=1;j<=a->N;j++) { 429d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKelget",SCALAPACKelget_("C"," ",&v,a->loc,&j,&j,a->desc)); 430d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKelset",SCALAPACKelset_(d2d,&one,&j,d2desc,&v)); 431d24d4204SJose E. Roman } 432d24d4204SJose E. Roman 433d24d4204SJose E. Roman /* redistribute d from a row of a 2d matrix */ 434d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&one,&a->N,d2d,&one,&one,d2desc,darray,&one,&one,ddesc,&a->grid->ictxrow)); 435d24d4204SJose E. Roman ierr = PetscFree(d2d);CHKERRQ(ierr); 436d24d4204SJose E. Roman } 437d24d4204SJose E. Roman 438d24d4204SJose E. Roman ierr = VecRestoreArray(D,&darray);CHKERRQ(ierr); 439d24d4204SJose E. Roman ierr = VecAssemblyBegin(D);CHKERRQ(ierr); 440d24d4204SJose E. Roman ierr = VecAssemblyEnd(D);CHKERRQ(ierr); 441d24d4204SJose E. Roman PetscFunctionReturn(0); 442d24d4204SJose E. Roman } 443d24d4204SJose E. Roman 444d24d4204SJose E. Roman static PetscErrorCode MatDiagonalScale_ScaLAPACK(Mat A,Vec L,Vec R) 445d24d4204SJose E. Roman { 446d24d4204SJose E. Roman PetscErrorCode ierr; 447d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 448d24d4204SJose E. Roman const PetscScalar *d; 449d24d4204SJose E. Roman const PetscInt *ranges; 450d24d4204SJose E. Roman PetscScalar *d2d; 451d24d4204SJose E. Roman PetscBLASInt i,j,ddesc[9],d2desc[9],mb,nb,lszd,zero=0,one=1,dlld,info; 452d24d4204SJose E. Roman 453d24d4204SJose E. Roman PetscFunctionBegin; 454d24d4204SJose E. Roman if (R) { 455d24d4204SJose E. Roman ierr = VecGetArrayRead(R,(const PetscScalar **)&d);CHKERRQ(ierr); 456d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (1d block distribution) */ 457d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->cmap,&ranges);CHKERRQ(ierr); 458d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&nb);CHKERRQ(ierr); /* D block size */ 459d24d4204SJose E. Roman dlld = 1; 460d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(ddesc,&one,&a->N,&one,&nb,&zero,&zero,&a->grid->ictxrow,&dlld,&info)); 461d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 462d24d4204SJose E. Roman 463d24d4204SJose E. Roman /* allocate 2d vector */ 464d24d4204SJose E. Roman lszd = SCALAPACKnumroc_(&a->N,&a->nb,&a->grid->mycol,&a->csrc,&a->grid->npcol); 465d24d4204SJose E. Roman ierr = PetscCalloc1(lszd,&d2d);CHKERRQ(ierr); 466d24d4204SJose E. Roman 467d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (2d block distribution) */ 468d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(d2desc,&one,&a->N,&one,&a->nb,&zero,&zero,&a->grid->ictxt,&dlld,&info)); 469d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 470d24d4204SJose E. Roman 471d24d4204SJose E. Roman /* redistribute d to a row of a 2d matrix */ 472d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&one,&a->N,(PetscScalar*)d,&one,&one,ddesc,d2d,&one,&one,d2desc,&a->grid->ictxrow)); 473d24d4204SJose E. Roman 474d24d4204SJose E. Roman /* broadcast along process columns */ 475d24d4204SJose E. Roman if (!a->grid->myrow) Cdgebs2d(a->grid->ictxt,"C"," ",1,lszd,d2d,dlld); 476d24d4204SJose E. Roman else Cdgebr2d(a->grid->ictxt,"C"," ",1,lszd,d2d,dlld,0,a->grid->mycol); 477d24d4204SJose E. Roman 478d24d4204SJose E. Roman /* local scaling */ 479d24d4204SJose E. Roman for (j=0;j<a->locc;j++) for (i=0;i<a->locr;i++) a->loc[i+j*a->lld] *= d2d[j]; 480d24d4204SJose E. Roman 481d24d4204SJose E. Roman ierr = PetscFree(d2d);CHKERRQ(ierr); 482d24d4204SJose E. Roman ierr = VecRestoreArrayRead(R,(const PetscScalar **)&d);CHKERRQ(ierr); 483d24d4204SJose E. Roman } 484d24d4204SJose E. Roman if (L) { 485d24d4204SJose E. Roman ierr = VecGetArrayRead(L,(const PetscScalar **)&d);CHKERRQ(ierr); 486d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (1d block distribution) */ 487d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->rmap,&ranges);CHKERRQ(ierr); 488d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&mb);CHKERRQ(ierr); /* D block size */ 489d24d4204SJose E. Roman dlld = PetscMax(1,A->rmap->n); 490d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(ddesc,&a->M,&one,&mb,&one,&zero,&zero,&a->grid->ictxcol,&dlld,&info)); 491d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 492d24d4204SJose E. Roman 493d24d4204SJose E. Roman /* allocate 2d vector */ 494d24d4204SJose E. Roman lszd = SCALAPACKnumroc_(&a->M,&a->mb,&a->grid->myrow,&a->rsrc,&a->grid->nprow); 495d24d4204SJose E. Roman ierr = PetscCalloc1(lszd,&d2d);CHKERRQ(ierr); 496d24d4204SJose E. Roman dlld = PetscMax(1,lszd); 497d24d4204SJose E. Roman 498d24d4204SJose E. Roman /* create ScaLAPACK descriptor for vector (2d block distribution) */ 499d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(d2desc,&a->M,&one,&a->mb,&one,&zero,&zero,&a->grid->ictxt,&dlld,&info)); 500d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 501d24d4204SJose E. Roman 502d24d4204SJose E. Roman /* redistribute d to a column of a 2d matrix */ 503d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&one,(PetscScalar*)d,&one,&one,ddesc,d2d,&one,&one,d2desc,&a->grid->ictxcol)); 504d24d4204SJose E. Roman 505d24d4204SJose E. Roman /* broadcast along process rows */ 506d24d4204SJose E. Roman if (!a->grid->mycol) Cdgebs2d(a->grid->ictxt,"R"," ",lszd,1,d2d,dlld); 507d24d4204SJose E. Roman else Cdgebr2d(a->grid->ictxt,"R"," ",lszd,1,d2d,dlld,a->grid->myrow,0); 508d24d4204SJose E. Roman 509d24d4204SJose E. Roman /* local scaling */ 510d24d4204SJose E. Roman for (i=0;i<a->locr;i++) for (j=0;j<a->locc;j++) a->loc[i+j*a->lld] *= d2d[i]; 511d24d4204SJose E. Roman 512d24d4204SJose E. Roman ierr = PetscFree(d2d);CHKERRQ(ierr); 513d24d4204SJose E. Roman ierr = VecRestoreArrayRead(L,(const PetscScalar **)&d);CHKERRQ(ierr); 514d24d4204SJose E. Roman } 515d24d4204SJose E. Roman PetscFunctionReturn(0); 516d24d4204SJose E. Roman } 517d24d4204SJose E. Roman 518d24d4204SJose E. Roman static PetscErrorCode MatMissingDiagonal_ScaLAPACK(Mat A,PetscBool *missing,PetscInt *d) 519d24d4204SJose E. Roman { 520d24d4204SJose E. Roman PetscFunctionBegin; 521d24d4204SJose E. Roman *missing = PETSC_FALSE; 522d24d4204SJose E. Roman PetscFunctionReturn(0); 523d24d4204SJose E. Roman } 524d24d4204SJose E. Roman 525d24d4204SJose E. Roman static PetscErrorCode MatScale_ScaLAPACK(Mat X,PetscScalar a) 526d24d4204SJose E. Roman { 527d24d4204SJose E. Roman Mat_ScaLAPACK *x = (Mat_ScaLAPACK*)X->data; 528d24d4204SJose E. Roman PetscBLASInt n,one=1; 529d24d4204SJose E. Roman 530d24d4204SJose E. Roman PetscFunctionBegin; 531d24d4204SJose E. Roman n = x->lld*x->locc; 532d24d4204SJose E. Roman PetscStackCallBLAS("BLASscal",BLASscal_(&n,&a,x->loc,&one)); 533d24d4204SJose E. Roman PetscFunctionReturn(0); 534d24d4204SJose E. Roman } 535d24d4204SJose E. Roman 536d24d4204SJose E. Roman static PetscErrorCode MatShift_ScaLAPACK(Mat X,PetscScalar alpha) 537d24d4204SJose E. Roman { 538d24d4204SJose E. Roman Mat_ScaLAPACK *x = (Mat_ScaLAPACK*)X->data; 539d24d4204SJose E. Roman PetscBLASInt i,n; 540d24d4204SJose E. Roman PetscScalar v; 541d24d4204SJose E. Roman 542d24d4204SJose E. Roman PetscFunctionBegin; 543d24d4204SJose E. Roman n = PetscMin(x->M,x->N); 544d24d4204SJose E. Roman for (i=1;i<=n;i++) { 545d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKelget",SCALAPACKelget_("-"," ",&v,x->loc,&i,&i,x->desc)); 546d24d4204SJose E. Roman v += alpha; 547d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKelset",SCALAPACKelset_(x->loc,&i,&i,x->desc,&v)); 548d24d4204SJose E. Roman } 549d24d4204SJose E. Roman PetscFunctionReturn(0); 550d24d4204SJose E. Roman } 551d24d4204SJose E. Roman 552d24d4204SJose E. Roman static PetscErrorCode MatAXPY_ScaLAPACK(Mat Y,PetscScalar alpha,Mat X,MatStructure str) 553d24d4204SJose E. Roman { 554d24d4204SJose E. Roman PetscErrorCode ierr; 555d24d4204SJose E. Roman Mat_ScaLAPACK *x = (Mat_ScaLAPACK*)X->data; 556d24d4204SJose E. Roman Mat_ScaLAPACK *y = (Mat_ScaLAPACK*)Y->data; 557d24d4204SJose E. Roman PetscBLASInt one=1; 558d24d4204SJose E. Roman PetscScalar beta=1.0; 559d24d4204SJose E. Roman 560d24d4204SJose E. Roman PetscFunctionBegin; 561d24d4204SJose E. Roman MatScaLAPACKCheckDistribution(Y,1,X,3); 562d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKmatadd",SCALAPACKmatadd_(&x->M,&x->N,&alpha,x->loc,&one,&one,x->desc,&beta,y->loc,&one,&one,y->desc)); 563d24d4204SJose E. Roman ierr = PetscObjectStateIncrease((PetscObject)Y);CHKERRQ(ierr); 564d24d4204SJose E. Roman PetscFunctionReturn(0); 565d24d4204SJose E. Roman } 566d24d4204SJose E. Roman 567d24d4204SJose E. Roman static PetscErrorCode MatCopy_ScaLAPACK(Mat A,Mat B,MatStructure str) 568d24d4204SJose E. Roman { 569d24d4204SJose E. Roman PetscErrorCode ierr; 570d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 571d24d4204SJose E. Roman Mat_ScaLAPACK *b = (Mat_ScaLAPACK*)B->data; 572d24d4204SJose E. Roman 573d24d4204SJose E. Roman PetscFunctionBegin; 574d24d4204SJose E. Roman ierr = PetscArraycpy(b->loc,a->loc,a->lld*a->locc);CHKERRQ(ierr); 575d24d4204SJose E. Roman ierr = PetscObjectStateIncrease((PetscObject)B);CHKERRQ(ierr); 576d24d4204SJose E. Roman PetscFunctionReturn(0); 577d24d4204SJose E. Roman } 578d24d4204SJose E. Roman 579d24d4204SJose E. Roman static PetscErrorCode MatDuplicate_ScaLAPACK(Mat A,MatDuplicateOption op,Mat *B) 580d24d4204SJose E. Roman { 581d24d4204SJose E. Roman Mat Bs; 582d24d4204SJose E. Roman MPI_Comm comm; 583d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data,*b; 584d24d4204SJose E. Roman PetscErrorCode ierr; 585d24d4204SJose E. Roman 586d24d4204SJose E. Roman PetscFunctionBegin; 587d24d4204SJose E. Roman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 588d24d4204SJose E. Roman ierr = MatCreate(comm,&Bs);CHKERRQ(ierr); 589d24d4204SJose E. Roman ierr = MatSetSizes(Bs,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr); 590d24d4204SJose E. Roman ierr = MatSetType(Bs,MATSCALAPACK);CHKERRQ(ierr); 591d24d4204SJose E. Roman b = (Mat_ScaLAPACK*)Bs->data; 592d24d4204SJose E. Roman b->M = a->M; 593d24d4204SJose E. Roman b->N = a->N; 594d24d4204SJose E. Roman b->mb = a->mb; 595d24d4204SJose E. Roman b->nb = a->nb; 596d24d4204SJose E. Roman b->rsrc = a->rsrc; 597d24d4204SJose E. Roman b->csrc = a->csrc; 598d24d4204SJose E. Roman ierr = MatSetUp(Bs);CHKERRQ(ierr); 599d24d4204SJose E. Roman *B = Bs; 600d24d4204SJose E. Roman if (op == MAT_COPY_VALUES) { 601d24d4204SJose E. Roman ierr = PetscArraycpy(b->loc,a->loc,a->lld*a->locc);CHKERRQ(ierr); 602d24d4204SJose E. Roman } 603d24d4204SJose E. Roman Bs->assembled = PETSC_TRUE; 604d24d4204SJose E. Roman PetscFunctionReturn(0); 605d24d4204SJose E. Roman } 606d24d4204SJose E. Roman 607d24d4204SJose E. Roman static PetscErrorCode MatTranspose_ScaLAPACK(Mat A,MatReuse reuse,Mat *B) 608d24d4204SJose E. Roman { 609d24d4204SJose E. Roman PetscErrorCode ierr; 610d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data, *b; 611d24d4204SJose E. Roman Mat Bs = *B; 612d24d4204SJose E. Roman PetscBLASInt one=1; 613d24d4204SJose E. Roman PetscScalar sone=1.0,zero=0.0; 614d24d4204SJose E. Roman #if defined(PETSC_USE_COMPLEX) 615d24d4204SJose E. Roman PetscInt i,j; 616d24d4204SJose E. Roman #endif 617d24d4204SJose E. Roman 618d24d4204SJose E. Roman PetscFunctionBegin; 619d24d4204SJose E. Roman if (reuse == MAT_INITIAL_MATRIX) { 620d24d4204SJose E. Roman ierr = MatCreate(PetscObjectComm((PetscObject)A),&Bs);CHKERRQ(ierr); 621d24d4204SJose E. Roman ierr = MatSetSizes(Bs,A->cmap->n,A->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr); 622d24d4204SJose E. Roman ierr = MatSetType(Bs,MATSCALAPACK);CHKERRQ(ierr); 623d24d4204SJose E. Roman ierr = MatSetUp(Bs);CHKERRQ(ierr); 624d24d4204SJose E. Roman *B = Bs; 625d24d4204SJose E. Roman } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only MAT_INITIAL_MATRIX supported"); 626d24d4204SJose E. Roman b = (Mat_ScaLAPACK*)Bs->data; 627d24d4204SJose E. Roman PetscStackCallBLAS("PBLAStran",PBLAStran_(&a->N,&a->M,&sone,a->loc,&one,&one,a->desc,&zero,b->loc,&one,&one,b->desc)); 628d24d4204SJose E. Roman #if defined(PETSC_USE_COMPLEX) 629d24d4204SJose E. Roman /* undo conjugation */ 630d24d4204SJose E. Roman for (i=0;i<b->locr;i++) for (j=0;j<b->locc;j++) b->loc[i+j*b->lld] = PetscConj(b->loc[i+j*b->lld]); 631d24d4204SJose E. Roman #endif 632d24d4204SJose E. Roman Bs->assembled = PETSC_TRUE; 633d24d4204SJose E. Roman PetscFunctionReturn(0); 634d24d4204SJose E. Roman } 635d24d4204SJose E. Roman 636d24d4204SJose E. Roman static PetscErrorCode MatConjugate_ScaLAPACK(Mat A) 637d24d4204SJose E. Roman { 638d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 639d24d4204SJose E. Roman PetscInt i,j; 640d24d4204SJose E. Roman 641d24d4204SJose E. Roman PetscFunctionBegin; 642d24d4204SJose E. Roman for (i=0;i<a->locr;i++) for (j=0;j<a->locc;j++) a->loc[i+j*a->lld] = PetscConj(a->loc[i+j*a->lld]); 643d24d4204SJose E. Roman PetscFunctionReturn(0); 644d24d4204SJose E. Roman } 645d24d4204SJose E. Roman 646d24d4204SJose E. Roman static PetscErrorCode MatHermitianTranspose_ScaLAPACK(Mat A,MatReuse reuse,Mat *B) 647d24d4204SJose E. Roman { 648d24d4204SJose E. Roman PetscErrorCode ierr; 649d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data, *b; 650d24d4204SJose E. Roman Mat Bs = *B; 651d24d4204SJose E. Roman PetscBLASInt one=1; 652d24d4204SJose E. Roman PetscScalar sone=1.0,zero=0.0; 653d24d4204SJose E. Roman 654d24d4204SJose E. Roman PetscFunctionBegin; 655d24d4204SJose E. Roman if (reuse == MAT_INITIAL_MATRIX) { 656d24d4204SJose E. Roman ierr = MatCreate(PetscObjectComm((PetscObject)A),&Bs);CHKERRQ(ierr); 657d24d4204SJose E. Roman ierr = MatSetSizes(Bs,A->cmap->n,A->rmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr); 658d24d4204SJose E. Roman ierr = MatSetType(Bs,MATSCALAPACK);CHKERRQ(ierr); 659d24d4204SJose E. Roman ierr = MatSetUp(Bs);CHKERRQ(ierr); 660d24d4204SJose E. Roman *B = Bs; 661d24d4204SJose E. Roman } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only MAT_INITIAL_MATRIX supported"); 662d24d4204SJose E. Roman b = (Mat_ScaLAPACK*)Bs->data; 663d24d4204SJose E. Roman PetscStackCallBLAS("PBLAStran",PBLAStran_(&a->N,&a->M,&sone,a->loc,&one,&one,a->desc,&zero,b->loc,&one,&one,b->desc)); 664d24d4204SJose E. Roman Bs->assembled = PETSC_TRUE; 665d24d4204SJose E. Roman PetscFunctionReturn(0); 666d24d4204SJose E. Roman } 667d24d4204SJose E. Roman 668d24d4204SJose E. Roman static PetscErrorCode MatSolve_ScaLAPACK(Mat A,Vec B,Vec X) 669d24d4204SJose E. Roman { 670d24d4204SJose E. Roman PetscErrorCode ierr; 671d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 672d24d4204SJose E. Roman PetscScalar *x,*x2d; 673d24d4204SJose E. Roman const PetscInt *ranges; 674d24d4204SJose E. Roman PetscBLASInt xdesc[9],x2desc[9],mb,lszx,zero=0,one=1,xlld,nrhs=1,info; 675d24d4204SJose E. Roman 676d24d4204SJose E. Roman PetscFunctionBegin; 677d24d4204SJose E. Roman ierr = VecCopy(B,X);CHKERRQ(ierr); 678d24d4204SJose E. Roman ierr = VecGetArray(X,&x);CHKERRQ(ierr); 679d24d4204SJose E. Roman 680d24d4204SJose E. Roman /* create ScaLAPACK descriptor for a vector (1d block distribution) */ 681d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->rmap,&ranges);CHKERRQ(ierr); 682d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&mb);CHKERRQ(ierr); /* x block size */ 683d24d4204SJose E. Roman xlld = PetscMax(1,A->rmap->n); 684d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(xdesc,&a->M,&one,&mb,&one,&zero,&zero,&a->grid->ictxcol,&xlld,&info)); 685d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 686d24d4204SJose E. Roman 687d24d4204SJose E. Roman /* allocate 2d vector */ 688d24d4204SJose E. Roman lszx = SCALAPACKnumroc_(&a->M,&a->mb,&a->grid->myrow,&a->rsrc,&a->grid->nprow); 689d24d4204SJose E. Roman ierr = PetscMalloc1(lszx,&x2d);CHKERRQ(ierr); 690d24d4204SJose E. Roman xlld = PetscMax(1,lszx); 691d24d4204SJose E. Roman 692d24d4204SJose E. Roman /* create ScaLAPACK descriptor for a vector (2d block distribution) */ 693d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(x2desc,&a->M,&one,&a->mb,&one,&zero,&zero,&a->grid->ictxt,&xlld,&info)); 694d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 695d24d4204SJose E. Roman 696d24d4204SJose E. Roman /* redistribute x as a column of a 2d matrix */ 697d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&one,x,&one,&one,xdesc,x2d,&one,&one,x2desc,&a->grid->ictxcol)); 698d24d4204SJose E. Roman 699d24d4204SJose E. Roman /* call ScaLAPACK subroutine */ 700d24d4204SJose E. Roman switch (A->factortype) { 701d24d4204SJose E. Roman case MAT_FACTOR_LU: 702d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgetrs",SCALAPACKgetrs_("N",&a->M,&nrhs,a->loc,&one,&one,a->desc,a->pivots,x2d,&one,&one,x2desc,&info)); 703d24d4204SJose E. Roman PetscCheckScaLapackInfo("getrs",info); 704d24d4204SJose E. Roman break; 705d24d4204SJose E. Roman case MAT_FACTOR_CHOLESKY: 706d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKpotrs",SCALAPACKpotrs_("L",&a->M,&nrhs,a->loc,&one,&one,a->desc,x2d,&one,&one,x2desc,&info)); 707d24d4204SJose E. Roman PetscCheckScaLapackInfo("potrs",info); 708d24d4204SJose E. Roman break; 709d24d4204SJose E. Roman default: 710d24d4204SJose E. Roman SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unfactored Matrix or Unsupported MatFactorType"); 711d24d4204SJose E. Roman break; 712d24d4204SJose E. Roman } 713d24d4204SJose E. Roman 714d24d4204SJose E. Roman /* redistribute x from a column of a 2d matrix */ 715d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&one,x2d,&one,&one,x2desc,x,&one,&one,xdesc,&a->grid->ictxcol)); 716d24d4204SJose E. Roman 717d24d4204SJose E. Roman ierr = PetscFree(x2d);CHKERRQ(ierr); 718d24d4204SJose E. Roman ierr = VecRestoreArray(X,&x);CHKERRQ(ierr); 719d24d4204SJose E. Roman PetscFunctionReturn(0); 720d24d4204SJose E. Roman } 721d24d4204SJose E. Roman 722d24d4204SJose E. Roman static PetscErrorCode MatSolveAdd_ScaLAPACK(Mat A,Vec B,Vec Y,Vec X) 723d24d4204SJose E. Roman { 724d24d4204SJose E. Roman PetscErrorCode ierr; 725d24d4204SJose E. Roman 726d24d4204SJose E. Roman PetscFunctionBegin; 727d24d4204SJose E. Roman ierr = MatSolve_ScaLAPACK(A,B,X);CHKERRQ(ierr); 728d24d4204SJose E. Roman ierr = VecAXPY(X,1,Y);CHKERRQ(ierr); 729d24d4204SJose E. Roman PetscFunctionReturn(0); 730d24d4204SJose E. Roman } 731d24d4204SJose E. Roman 732d24d4204SJose E. Roman static PetscErrorCode MatMatSolve_ScaLAPACK(Mat A,Mat B,Mat X) 733d24d4204SJose E. Roman { 734d24d4204SJose E. Roman PetscErrorCode ierr; 735d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data,*b,*x; 736d24d4204SJose E. Roman PetscBool flg1,flg2; 737d24d4204SJose E. Roman PetscBLASInt one=1,info; 738d24d4204SJose E. Roman 739d24d4204SJose E. Roman PetscFunctionBegin; 740d24d4204SJose E. Roman ierr = PetscObjectTypeCompare((PetscObject)B,MATSCALAPACK,&flg1);CHKERRQ(ierr); 741d24d4204SJose E. Roman ierr = PetscObjectTypeCompare((PetscObject)X,MATSCALAPACK,&flg2);CHKERRQ(ierr); 742d24d4204SJose E. Roman if (!(flg1 && flg2)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Both B and X must be of type MATSCALAPACK"); 743d24d4204SJose E. Roman MatScaLAPACKCheckDistribution(B,1,X,2); 744d24d4204SJose E. Roman b = (Mat_ScaLAPACK*)B->data; 745d24d4204SJose E. Roman x = (Mat_ScaLAPACK*)X->data; 746d24d4204SJose E. Roman ierr = PetscArraycpy(x->loc,b->loc,b->lld*b->locc);CHKERRQ(ierr); 747d24d4204SJose E. Roman 748d24d4204SJose E. Roman switch (A->factortype) { 749d24d4204SJose E. Roman case MAT_FACTOR_LU: 750d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgetrs",SCALAPACKgetrs_("N",&a->M,&x->N,a->loc,&one,&one,a->desc,a->pivots,x->loc,&one,&one,x->desc,&info)); 751d24d4204SJose E. Roman PetscCheckScaLapackInfo("getrs",info); 752d24d4204SJose E. Roman break; 753d24d4204SJose E. Roman case MAT_FACTOR_CHOLESKY: 754d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKpotrs",SCALAPACKpotrs_("L",&a->M,&x->N,a->loc,&one,&one,a->desc,x->loc,&one,&one,x->desc,&info)); 755d24d4204SJose E. Roman PetscCheckScaLapackInfo("potrs",info); 756d24d4204SJose E. Roman break; 757d24d4204SJose E. Roman default: 758d24d4204SJose E. Roman SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Unfactored Matrix or Unsupported MatFactorType"); 759d24d4204SJose E. Roman break; 760d24d4204SJose E. Roman } 761d24d4204SJose E. Roman PetscFunctionReturn(0); 762d24d4204SJose E. Roman } 763d24d4204SJose E. Roman 764d24d4204SJose E. Roman static PetscErrorCode MatLUFactor_ScaLAPACK(Mat A,IS row,IS col,const MatFactorInfo *factorinfo) 765d24d4204SJose E. Roman { 766d24d4204SJose E. Roman PetscErrorCode ierr; 767d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 768d24d4204SJose E. Roman PetscBLASInt one=1,info; 769d24d4204SJose E. Roman 770d24d4204SJose E. Roman PetscFunctionBegin; 771d24d4204SJose E. Roman if (!a->pivots) { 772d24d4204SJose E. Roman ierr = PetscMalloc1(a->locr+a->mb,&a->pivots);CHKERRQ(ierr); 773d24d4204SJose E. Roman ierr = PetscLogObjectMemory((PetscObject)A,a->locr*sizeof(PetscBLASInt));CHKERRQ(ierr); 774d24d4204SJose E. Roman } 775d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgetrf",SCALAPACKgetrf_(&a->M,&a->N,a->loc,&one,&one,a->desc,a->pivots,&info)); 776d24d4204SJose E. Roman PetscCheckScaLapackInfo("getrf",info); 777d24d4204SJose E. Roman A->factortype = MAT_FACTOR_LU; 778d24d4204SJose E. Roman A->assembled = PETSC_TRUE; 779d24d4204SJose E. Roman 780d24d4204SJose E. Roman ierr = PetscFree(A->solvertype);CHKERRQ(ierr); 781d24d4204SJose E. Roman ierr = PetscStrallocpy(MATSOLVERSCALAPACK,&A->solvertype);CHKERRQ(ierr); 782d24d4204SJose E. Roman PetscFunctionReturn(0); 783d24d4204SJose E. Roman } 784d24d4204SJose E. Roman 785d24d4204SJose E. Roman static PetscErrorCode MatLUFactorNumeric_ScaLAPACK(Mat F,Mat A,const MatFactorInfo *info) 786d24d4204SJose E. Roman { 787d24d4204SJose E. Roman PetscErrorCode ierr; 788d24d4204SJose E. Roman 789d24d4204SJose E. Roman PetscFunctionBegin; 790d24d4204SJose E. Roman ierr = MatCopy(A,F,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 791d24d4204SJose E. Roman ierr = MatLUFactor_ScaLAPACK(F,0,0,info);CHKERRQ(ierr); 792d24d4204SJose E. Roman PetscFunctionReturn(0); 793d24d4204SJose E. Roman } 794d24d4204SJose E. Roman 795d24d4204SJose E. Roman static PetscErrorCode MatLUFactorSymbolic_ScaLAPACK(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 796d24d4204SJose E. Roman { 797d24d4204SJose E. Roman PetscFunctionBegin; 798d24d4204SJose E. Roman /* F is created and allocated by MatGetFactor_scalapack_petsc(), skip this routine. */ 799d24d4204SJose E. Roman PetscFunctionReturn(0); 800d24d4204SJose E. Roman } 801d24d4204SJose E. Roman 802d24d4204SJose E. Roman static PetscErrorCode MatCholeskyFactor_ScaLAPACK(Mat A,IS perm,const MatFactorInfo *factorinfo) 803d24d4204SJose E. Roman { 804d24d4204SJose E. Roman PetscErrorCode ierr; 805d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 806d24d4204SJose E. Roman PetscBLASInt one=1,info; 807d24d4204SJose E. Roman 808d24d4204SJose E. Roman PetscFunctionBegin; 809d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKpotrf",SCALAPACKpotrf_("L",&a->M,a->loc,&one,&one,a->desc,&info)); 810d24d4204SJose E. Roman PetscCheckScaLapackInfo("potrf",info); 811d24d4204SJose E. Roman A->factortype = MAT_FACTOR_CHOLESKY; 812d24d4204SJose E. Roman A->assembled = PETSC_TRUE; 813d24d4204SJose E. Roman 814d24d4204SJose E. Roman ierr = PetscFree(A->solvertype);CHKERRQ(ierr); 815d24d4204SJose E. Roman ierr = PetscStrallocpy(MATSOLVERSCALAPACK,&A->solvertype);CHKERRQ(ierr); 816d24d4204SJose E. Roman PetscFunctionReturn(0); 817d24d4204SJose E. Roman } 818d24d4204SJose E. Roman 819d24d4204SJose E. Roman static PetscErrorCode MatCholeskyFactorNumeric_ScaLAPACK(Mat F,Mat A,const MatFactorInfo *info) 820d24d4204SJose E. Roman { 821d24d4204SJose E. Roman PetscErrorCode ierr; 822d24d4204SJose E. Roman 823d24d4204SJose E. Roman PetscFunctionBegin; 824d24d4204SJose E. Roman ierr = MatCopy(A,F,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 825d24d4204SJose E. Roman ierr = MatCholeskyFactor_ScaLAPACK(F,0,info);CHKERRQ(ierr); 826d24d4204SJose E. Roman PetscFunctionReturn(0); 827d24d4204SJose E. Roman } 828d24d4204SJose E. Roman 829d24d4204SJose E. Roman static PetscErrorCode MatCholeskyFactorSymbolic_ScaLAPACK(Mat F,Mat A,IS perm,const MatFactorInfo *info) 830d24d4204SJose E. Roman { 831d24d4204SJose E. Roman PetscFunctionBegin; 832d24d4204SJose E. Roman /* F is created and allocated by MatGetFactor_scalapack_petsc(), skip this routine. */ 833d24d4204SJose E. Roman PetscFunctionReturn(0); 834d24d4204SJose E. Roman } 835d24d4204SJose E. Roman 836d24d4204SJose E. Roman PetscErrorCode MatFactorGetSolverType_scalapack_scalapack(Mat A,MatSolverType *type) 837d24d4204SJose E. Roman { 838d24d4204SJose E. Roman PetscFunctionBegin; 839d24d4204SJose E. Roman *type = MATSOLVERSCALAPACK; 840d24d4204SJose E. Roman PetscFunctionReturn(0); 841d24d4204SJose E. Roman } 842d24d4204SJose E. Roman 843d24d4204SJose E. Roman static PetscErrorCode MatGetFactor_scalapack_scalapack(Mat A,MatFactorType ftype,Mat *F) 844d24d4204SJose E. Roman { 845d24d4204SJose E. Roman Mat B; 846d24d4204SJose E. Roman PetscErrorCode ierr; 847d24d4204SJose E. Roman 848d24d4204SJose E. Roman PetscFunctionBegin; 849d24d4204SJose E. Roman /* Create the factorization matrix */ 850d24d4204SJose E. Roman ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 851d24d4204SJose E. Roman ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr); 852d24d4204SJose E. Roman ierr = MatSetType(B,MATSCALAPACK);CHKERRQ(ierr); 853d24d4204SJose E. Roman ierr = MatSetUp(B);CHKERRQ(ierr); 854d24d4204SJose E. Roman B->factortype = ftype; 855d24d4204SJose E. Roman ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 856d24d4204SJose E. Roman ierr = PetscStrallocpy(MATSOLVERSCALAPACK,&B->solvertype);CHKERRQ(ierr); 857d24d4204SJose E. Roman 858d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_scalapack_scalapack);CHKERRQ(ierr); 859d24d4204SJose E. Roman *F = B; 860d24d4204SJose E. Roman PetscFunctionReturn(0); 861d24d4204SJose E. Roman } 862d24d4204SJose E. Roman 863d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_ScaLAPACK(void) 864d24d4204SJose E. Roman { 865d24d4204SJose E. Roman PetscErrorCode ierr; 866d24d4204SJose E. Roman 867d24d4204SJose E. Roman PetscFunctionBegin; 868d24d4204SJose E. Roman ierr = MatSolverTypeRegister(MATSOLVERSCALAPACK,MATSCALAPACK,MAT_FACTOR_LU,MatGetFactor_scalapack_scalapack);CHKERRQ(ierr); 869d24d4204SJose E. Roman ierr = MatSolverTypeRegister(MATSOLVERSCALAPACK,MATSCALAPACK,MAT_FACTOR_CHOLESKY,MatGetFactor_scalapack_scalapack);CHKERRQ(ierr); 870d24d4204SJose E. Roman PetscFunctionReturn(0); 871d24d4204SJose E. Roman } 872d24d4204SJose E. Roman 873d24d4204SJose E. Roman static PetscErrorCode MatNorm_ScaLAPACK(Mat A,NormType type,PetscReal *nrm) 874d24d4204SJose E. Roman { 875d24d4204SJose E. Roman PetscErrorCode ierr; 876d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 877d24d4204SJose E. Roman PetscBLASInt one=1,lwork=0; 878d24d4204SJose E. Roman const char *ntype; 879d68f4f38SPierre Jolivet PetscScalar *work=NULL,dummy; 880d24d4204SJose E. Roman 881d24d4204SJose E. Roman PetscFunctionBegin; 882d24d4204SJose E. Roman switch (type){ 883d24d4204SJose E. Roman case NORM_1: 884d24d4204SJose E. Roman ntype = "1"; 885d24d4204SJose E. Roman lwork = PetscMax(a->locr,a->locc); 886d24d4204SJose E. Roman break; 887d24d4204SJose E. Roman case NORM_FROBENIUS: 888d24d4204SJose E. Roman ntype = "F"; 889d24d4204SJose E. Roman work = &dummy; 890d24d4204SJose E. Roman break; 891d24d4204SJose E. Roman case NORM_INFINITY: 892d24d4204SJose E. Roman ntype = "I"; 893d24d4204SJose E. Roman lwork = PetscMax(a->locr,a->locc); 894d24d4204SJose E. Roman break; 895d24d4204SJose E. Roman default: 896d24d4204SJose E. Roman SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Unsupported norm type"); 897d24d4204SJose E. Roman } 898d24d4204SJose E. Roman if (lwork) { ierr = PetscMalloc1(lwork,&work);CHKERRQ(ierr); } 899d24d4204SJose E. Roman *nrm = SCALAPACKlange_(ntype,&a->M,&a->N,a->loc,&one,&one,a->desc,work); 900d24d4204SJose E. Roman if (lwork) { ierr = PetscFree(work);CHKERRQ(ierr); } 901d24d4204SJose E. Roman PetscFunctionReturn(0); 902d24d4204SJose E. Roman } 903d24d4204SJose E. Roman 904d24d4204SJose E. Roman static PetscErrorCode MatZeroEntries_ScaLAPACK(Mat A) 905d24d4204SJose E. Roman { 906d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 907d24d4204SJose E. Roman PetscErrorCode ierr; 908d24d4204SJose E. Roman 909d24d4204SJose E. Roman PetscFunctionBegin; 910d24d4204SJose E. Roman ierr = PetscArrayzero(a->loc,a->lld*a->locc);CHKERRQ(ierr); 911d24d4204SJose E. Roman PetscFunctionReturn(0); 912d24d4204SJose E. Roman } 913d24d4204SJose E. Roman 914d24d4204SJose E. Roman static PetscErrorCode MatGetOwnershipIS_ScaLAPACK(Mat A,IS *rows,IS *cols) 915d24d4204SJose E. Roman { 916d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 917d24d4204SJose E. Roman PetscErrorCode ierr; 918d24d4204SJose E. Roman PetscInt i,n,nb,isrc,nproc,iproc,*idx; 919d24d4204SJose E. Roman 920d24d4204SJose E. Roman PetscFunctionBegin; 921d24d4204SJose E. Roman if (rows) { 922d24d4204SJose E. Roman n = a->locr; 923d24d4204SJose E. Roman nb = a->mb; 924d24d4204SJose E. Roman isrc = a->rsrc; 925d24d4204SJose E. Roman nproc = a->grid->nprow; 926d24d4204SJose E. Roman iproc = a->grid->myrow; 927d24d4204SJose E. Roman ierr = PetscMalloc1(n,&idx);CHKERRQ(ierr); 928d24d4204SJose E. Roman for (i=0;i<n;i++) idx[i] = nproc*nb*(i/nb) + i%nb + ((nproc+iproc-isrc)%nproc)*nb; 929d24d4204SJose E. Roman ierr = ISCreateGeneral(PETSC_COMM_SELF,n,idx,PETSC_OWN_POINTER,rows);CHKERRQ(ierr); 930d24d4204SJose E. Roman } 931d24d4204SJose E. Roman if (cols) { 932d24d4204SJose E. Roman n = a->locc; 933d24d4204SJose E. Roman nb = a->nb; 934d24d4204SJose E. Roman isrc = a->csrc; 935d24d4204SJose E. Roman nproc = a->grid->npcol; 936d24d4204SJose E. Roman iproc = a->grid->mycol; 937d24d4204SJose E. Roman ierr = PetscMalloc1(n,&idx);CHKERRQ(ierr); 938d24d4204SJose E. Roman for (i=0;i<n;i++) idx[i] = nproc*nb*(i/nb) + i%nb + ((nproc+iproc-isrc)%nproc)*nb; 939d24d4204SJose E. Roman ierr = ISCreateGeneral(PETSC_COMM_SELF,n,idx,PETSC_OWN_POINTER,cols);CHKERRQ(ierr); 940d24d4204SJose E. Roman } 941d24d4204SJose E. Roman PetscFunctionReturn(0); 942d24d4204SJose E. Roman } 943d24d4204SJose E. Roman 944d24d4204SJose E. Roman static PetscErrorCode MatConvert_ScaLAPACK_Dense(Mat A,MatType newtype,MatReuse reuse,Mat *B) 945d24d4204SJose E. Roman { 946d24d4204SJose E. Roman PetscErrorCode ierr; 947d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 948d24d4204SJose E. Roman Mat Bmpi; 949d24d4204SJose E. Roman MPI_Comm comm; 9504b1a79daSJose E. Roman PetscInt i,M=A->rmap->N,N=A->cmap->N,m,n,rstart,rend,nz; 9514b1a79daSJose E. Roman const PetscInt *ranges,*branges,*cwork; 9524b1a79daSJose E. Roman const PetscScalar *vwork; 953d24d4204SJose E. Roman PetscBLASInt bdesc[9],bmb,zero=0,one=1,lld,info; 954d24d4204SJose E. Roman PetscScalar *barray; 9554b1a79daSJose E. Roman PetscBool differ=PETSC_FALSE; 9564b1a79daSJose E. Roman PetscMPIInt size; 957d24d4204SJose E. Roman 958d24d4204SJose E. Roman PetscFunctionBegin; 959d24d4204SJose E. Roman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 9604b1a79daSJose E. Roman ierr = PetscLayoutGetRanges(A->rmap,&ranges);CHKERRQ(ierr); 9614b1a79daSJose E. Roman 9624b1a79daSJose E. Roman if (reuse == MAT_REUSE_MATRIX) { /* check if local sizes differ in A and B */ 9634b1a79daSJose E. Roman ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 9644b1a79daSJose E. Roman ierr = PetscLayoutGetRanges((*B)->rmap,&branges);CHKERRQ(ierr); 9654b1a79daSJose E. Roman for (i=0;i<size;i++) if (ranges[i+1]!=branges[i+1]) { differ=PETSC_TRUE; break; } 9664b1a79daSJose E. Roman } 9674b1a79daSJose E. Roman 9684b1a79daSJose E. Roman if (reuse == MAT_REUSE_MATRIX && differ) { /* special case, use auxiliary dense matrix */ 9694b1a79daSJose E. Roman ierr = MatCreate(comm,&Bmpi);CHKERRQ(ierr); 9704b1a79daSJose E. Roman m = PETSC_DECIDE; 9714b1a79daSJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&m,&M);CHKERRQ(ierr); 9724b1a79daSJose E. Roman n = PETSC_DECIDE; 9734b1a79daSJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&n,&N);CHKERRQ(ierr); 9744b1a79daSJose E. Roman ierr = MatSetSizes(Bmpi,m,n,M,N);CHKERRQ(ierr); 9754b1a79daSJose E. Roman ierr = MatSetType(Bmpi,MATDENSE);CHKERRQ(ierr); 9764b1a79daSJose E. Roman ierr = MatSetUp(Bmpi);CHKERRQ(ierr); 9774b1a79daSJose E. Roman 9784b1a79daSJose E. Roman /* create ScaLAPACK descriptor for B (1d block distribution) */ 9794b1a79daSJose E. Roman ierr = PetscBLASIntCast(ranges[1],&bmb);CHKERRQ(ierr); /* row block size */ 9804b1a79daSJose E. Roman lld = PetscMax(A->rmap->n,1); /* local leading dimension */ 9814b1a79daSJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(bdesc,&a->M,&a->N,&bmb,&a->N,&zero,&zero,&a->grid->ictxcol,&lld,&info)); 9824b1a79daSJose E. Roman PetscCheckScaLapackInfo("descinit",info); 9834b1a79daSJose E. Roman 9844b1a79daSJose E. Roman /* redistribute matrix */ 9854b1a79daSJose E. Roman ierr = MatDenseGetArray(Bmpi,&barray);CHKERRQ(ierr); 9864b1a79daSJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&a->N,a->loc,&one,&one,a->desc,barray,&one,&one,bdesc,&a->grid->ictxcol)); 9874b1a79daSJose E. Roman ierr = MatDenseRestoreArray(Bmpi,&barray);CHKERRQ(ierr); 9884b1a79daSJose E. Roman ierr = MatAssemblyBegin(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 9894b1a79daSJose E. Roman ierr = MatAssemblyEnd(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 9904b1a79daSJose E. Roman 9914b1a79daSJose E. Roman /* transfer rows of auxiliary matrix to the final matrix B */ 9924b1a79daSJose E. Roman ierr = MatGetOwnershipRange(Bmpi,&rstart,&rend);CHKERRQ(ierr); 9934b1a79daSJose E. Roman for (i=rstart;i<rend;i++) { 9944b1a79daSJose E. Roman ierr = MatGetRow(Bmpi,i,&nz,&cwork,&vwork);CHKERRQ(ierr); 9954b1a79daSJose E. Roman ierr = MatSetValues(*B,1,&i,nz,cwork,vwork,INSERT_VALUES);CHKERRQ(ierr); 9964b1a79daSJose E. Roman ierr = MatRestoreRow(Bmpi,i,&nz,&cwork,&vwork);CHKERRQ(ierr); 9974b1a79daSJose E. Roman } 9984b1a79daSJose E. Roman ierr = MatAssemblyBegin(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 9994b1a79daSJose E. Roman ierr = MatAssemblyEnd(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 10004b1a79daSJose E. Roman ierr = MatDestroy(&Bmpi);CHKERRQ(ierr); 10014b1a79daSJose E. Roman 10024b1a79daSJose E. Roman } else { /* normal cases */ 1003d24d4204SJose E. Roman 1004d24d4204SJose E. Roman if (reuse == MAT_REUSE_MATRIX) Bmpi = *B; 1005d24d4204SJose E. Roman else { 1006d24d4204SJose E. Roman ierr = MatCreate(comm,&Bmpi);CHKERRQ(ierr); 100792c846b4SJose E. Roman m = PETSC_DECIDE; 100892c846b4SJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&m,&M);CHKERRQ(ierr); 100992c846b4SJose E. Roman n = PETSC_DECIDE; 101092c846b4SJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&n,&N);CHKERRQ(ierr); 101192c846b4SJose E. Roman ierr = MatSetSizes(Bmpi,m,n,M,N);CHKERRQ(ierr); 1012d24d4204SJose E. Roman ierr = MatSetType(Bmpi,MATDENSE);CHKERRQ(ierr); 1013d24d4204SJose E. Roman ierr = MatSetUp(Bmpi);CHKERRQ(ierr); 1014d24d4204SJose E. Roman } 1015d24d4204SJose E. Roman 1016d24d4204SJose E. Roman /* create ScaLAPACK descriptor for B (1d block distribution) */ 1017d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&bmb);CHKERRQ(ierr); /* row block size */ 1018d24d4204SJose E. Roman lld = PetscMax(A->rmap->n,1); /* local leading dimension */ 1019d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(bdesc,&a->M,&a->N,&bmb,&a->N,&zero,&zero,&a->grid->ictxcol,&lld,&info)); 1020d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 1021d24d4204SJose E. Roman 1022d24d4204SJose E. Roman /* redistribute matrix */ 1023d24d4204SJose E. Roman ierr = MatDenseGetArray(Bmpi,&barray);CHKERRQ(ierr); 1024d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&a->M,&a->N,a->loc,&one,&one,a->desc,barray,&one,&one,bdesc,&a->grid->ictxcol)); 1025d24d4204SJose E. Roman ierr = MatDenseRestoreArray(Bmpi,&barray);CHKERRQ(ierr); 1026d24d4204SJose E. Roman 1027d24d4204SJose E. Roman ierr = MatAssemblyBegin(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1028d24d4204SJose E. Roman ierr = MatAssemblyEnd(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1029d24d4204SJose E. Roman if (reuse == MAT_INPLACE_MATRIX) { 1030d24d4204SJose E. Roman ierr = MatHeaderReplace(A,&Bmpi);CHKERRQ(ierr); 1031d24d4204SJose E. Roman } else *B = Bmpi; 10324b1a79daSJose E. Roman } 1033d24d4204SJose E. Roman PetscFunctionReturn(0); 1034d24d4204SJose E. Roman } 1035d24d4204SJose E. Roman 1036d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatConvert_Dense_ScaLAPACK(Mat A,MatType newtype,MatReuse reuse,Mat *B) 1037d24d4204SJose E. Roman { 1038d24d4204SJose E. Roman PetscErrorCode ierr; 1039d24d4204SJose E. Roman Mat_ScaLAPACK *b; 1040d24d4204SJose E. Roman Mat Bmpi; 1041d24d4204SJose E. Roman MPI_Comm comm; 104292c846b4SJose E. Roman PetscInt M=A->rmap->N,N=A->cmap->N,m,n; 1043d24d4204SJose E. Roman const PetscInt *ranges; 1044d24d4204SJose E. Roman PetscBLASInt adesc[9],amb,zero=0,one=1,lld,info; 1045d24d4204SJose E. Roman PetscScalar *aarray; 10464e8b52a1SJose E. Roman PetscInt lda; 1047d24d4204SJose E. Roman 1048d24d4204SJose E. Roman PetscFunctionBegin; 1049d24d4204SJose E. Roman ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr); 1050d24d4204SJose E. Roman 1051d24d4204SJose E. Roman if (reuse == MAT_REUSE_MATRIX) Bmpi = *B; 1052d24d4204SJose E. Roman else { 1053d24d4204SJose E. Roman ierr = MatCreate(comm,&Bmpi);CHKERRQ(ierr); 105492c846b4SJose E. Roman m = PETSC_DECIDE; 105592c846b4SJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&m,&M);CHKERRQ(ierr); 105692c846b4SJose E. Roman n = PETSC_DECIDE; 105792c846b4SJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&n,&N);CHKERRQ(ierr); 105892c846b4SJose E. Roman ierr = MatSetSizes(Bmpi,m,n,M,N);CHKERRQ(ierr); 1059d24d4204SJose E. Roman ierr = MatSetType(Bmpi,MATSCALAPACK);CHKERRQ(ierr); 1060d24d4204SJose E. Roman ierr = MatSetUp(Bmpi);CHKERRQ(ierr); 1061d24d4204SJose E. Roman } 1062d24d4204SJose E. Roman b = (Mat_ScaLAPACK*)Bmpi->data; 1063d24d4204SJose E. Roman 1064d24d4204SJose E. Roman /* create ScaLAPACK descriptor for A (1d block distribution) */ 1065d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(A->rmap,&ranges);CHKERRQ(ierr); 1066d24d4204SJose E. Roman ierr = PetscBLASIntCast(ranges[1],&amb);CHKERRQ(ierr); /* row block size */ 10674e8b52a1SJose E. Roman ierr = MatDenseGetLDA(A,&lda);CHKERRQ(ierr); 10684e8b52a1SJose E. Roman lld = PetscMax(lda,1); /* local leading dimension */ 1069d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(adesc,&b->M,&b->N,&amb,&b->N,&zero,&zero,&b->grid->ictxcol,&lld,&info)); 1070d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 1071d24d4204SJose E. Roman 1072d24d4204SJose E. Roman /* redistribute matrix */ 1073d24d4204SJose E. Roman ierr = MatDenseGetArray(A,&aarray);CHKERRQ(ierr); 1074d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKgemr2d",SCALAPACKgemr2d_(&b->M,&b->N,aarray,&one,&one,adesc,b->loc,&one,&one,b->desc,&b->grid->ictxcol)); 1075d24d4204SJose E. Roman ierr = MatDenseRestoreArray(A,&aarray);CHKERRQ(ierr); 1076d24d4204SJose E. Roman 1077d24d4204SJose E. Roman ierr = MatAssemblyBegin(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1078d24d4204SJose E. Roman ierr = MatAssemblyEnd(Bmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1079d24d4204SJose E. Roman if (reuse == MAT_INPLACE_MATRIX) { 1080d24d4204SJose E. Roman ierr = MatHeaderReplace(A,&Bmpi);CHKERRQ(ierr); 1081d24d4204SJose E. Roman } else *B = Bmpi; 1082d24d4204SJose E. Roman PetscFunctionReturn(0); 1083d24d4204SJose E. Roman } 1084d24d4204SJose E. Roman 1085d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatConvert_AIJ_ScaLAPACK(Mat A,MatType newtype,MatReuse reuse,Mat *newmat) 1086d24d4204SJose E. Roman { 1087d24d4204SJose E. Roman Mat mat_scal; 1088d24d4204SJose E. Roman PetscErrorCode ierr; 1089d24d4204SJose E. Roman PetscInt M=A->rmap->N,N=A->cmap->N,rstart=A->rmap->rstart,rend=A->rmap->rend,m,n,row,ncols; 1090d24d4204SJose E. Roman const PetscInt *cols; 1091d24d4204SJose E. Roman const PetscScalar *vals; 1092d24d4204SJose E. Roman 1093d24d4204SJose E. Roman PetscFunctionBegin; 1094d24d4204SJose E. Roman if (reuse == MAT_REUSE_MATRIX) { 1095d24d4204SJose E. Roman mat_scal = *newmat; 1096d24d4204SJose E. Roman ierr = MatZeroEntries(mat_scal);CHKERRQ(ierr); 1097d24d4204SJose E. Roman } else { 1098d24d4204SJose E. Roman ierr = MatCreate(PetscObjectComm((PetscObject)A),&mat_scal);CHKERRQ(ierr); 1099d24d4204SJose E. Roman m = PETSC_DECIDE; 1100d24d4204SJose E. Roman ierr = PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A),&m,&M);CHKERRQ(ierr); 1101d24d4204SJose E. Roman n = PETSC_DECIDE; 1102d24d4204SJose E. Roman ierr = PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A),&n,&N);CHKERRQ(ierr); 1103d24d4204SJose E. Roman ierr = MatSetSizes(mat_scal,m,n,M,N);CHKERRQ(ierr); 1104d24d4204SJose E. Roman ierr = MatSetType(mat_scal,MATSCALAPACK);CHKERRQ(ierr); 1105d24d4204SJose E. Roman ierr = MatSetUp(mat_scal);CHKERRQ(ierr); 1106d24d4204SJose E. Roman } 1107d24d4204SJose E. Roman for (row=rstart;row<rend;row++) { 1108d24d4204SJose E. Roman ierr = MatGetRow(A,row,&ncols,&cols,&vals);CHKERRQ(ierr); 1109d24d4204SJose E. Roman ierr = MatSetValues(mat_scal,1,&row,ncols,cols,vals,INSERT_VALUES);CHKERRQ(ierr); 1110d24d4204SJose E. Roman ierr = MatRestoreRow(A,row,&ncols,&cols,&vals);CHKERRQ(ierr); 1111d24d4204SJose E. Roman } 1112d24d4204SJose E. Roman ierr = MatAssemblyBegin(mat_scal,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1113d24d4204SJose E. Roman ierr = MatAssemblyEnd(mat_scal,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1114d24d4204SJose E. Roman 1115d24d4204SJose E. Roman if (reuse == MAT_INPLACE_MATRIX) { ierr = MatHeaderReplace(A,&mat_scal);CHKERRQ(ierr); } 1116d24d4204SJose E. Roman else *newmat = mat_scal; 1117d24d4204SJose E. Roman PetscFunctionReturn(0); 1118d24d4204SJose E. Roman } 1119d24d4204SJose E. Roman 1120d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatConvert_SBAIJ_ScaLAPACK(Mat A, MatType newtype,MatReuse reuse,Mat *newmat) 1121d24d4204SJose E. Roman { 1122d24d4204SJose E. Roman Mat mat_scal; 1123d24d4204SJose E. Roman PetscErrorCode ierr; 1124d24d4204SJose E. Roman PetscInt M=A->rmap->N,N=A->cmap->N,m,n,row,ncols,j,rstart=A->rmap->rstart,rend=A->rmap->rend; 1125d24d4204SJose E. Roman const PetscInt *cols; 1126d24d4204SJose E. Roman const PetscScalar *vals; 1127d24d4204SJose E. Roman PetscScalar v; 1128d24d4204SJose E. Roman 1129d24d4204SJose E. Roman PetscFunctionBegin; 1130d24d4204SJose E. Roman if (reuse == MAT_REUSE_MATRIX) { 1131d24d4204SJose E. Roman mat_scal = *newmat; 1132d24d4204SJose E. Roman ierr = MatZeroEntries(mat_scal);CHKERRQ(ierr); 1133d24d4204SJose E. Roman } else { 1134d24d4204SJose E. Roman ierr = MatCreate(PetscObjectComm((PetscObject)A),&mat_scal);CHKERRQ(ierr); 1135d24d4204SJose E. Roman m = PETSC_DECIDE; 1136d24d4204SJose E. Roman ierr = PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A),&m,&M);CHKERRQ(ierr); 1137d24d4204SJose E. Roman n = PETSC_DECIDE; 1138d24d4204SJose E. Roman ierr = PetscSplitOwnershipEqual(PetscObjectComm((PetscObject)A),&n,&N);CHKERRQ(ierr); 1139d24d4204SJose E. Roman ierr = MatSetSizes(mat_scal,m,n,M,N);CHKERRQ(ierr); 1140d24d4204SJose E. Roman ierr = MatSetType(mat_scal,MATSCALAPACK);CHKERRQ(ierr); 1141d24d4204SJose E. Roman ierr = MatSetUp(mat_scal);CHKERRQ(ierr); 1142d24d4204SJose E. Roman } 1143d24d4204SJose E. Roman ierr = MatGetRowUpperTriangular(A);CHKERRQ(ierr); 1144d24d4204SJose E. Roman for (row=rstart;row<rend;row++) { 1145d24d4204SJose E. Roman ierr = MatGetRow(A,row,&ncols,&cols,&vals);CHKERRQ(ierr); 1146d24d4204SJose E. Roman ierr = MatSetValues(mat_scal,1,&row,ncols,cols,vals,ADD_VALUES);CHKERRQ(ierr); 1147d24d4204SJose E. Roman for (j=0;j<ncols;j++) { /* lower triangular part */ 1148d24d4204SJose E. Roman if (cols[j] == row) continue; 1149d24d4204SJose E. Roman v = A->hermitian ? PetscConj(vals[j]) : vals[j]; 1150d24d4204SJose E. Roman ierr = MatSetValues(mat_scal,1,&cols[j],1,&row,&v,ADD_VALUES);CHKERRQ(ierr); 1151d24d4204SJose E. Roman } 1152d24d4204SJose E. Roman ierr = MatRestoreRow(A,row,&ncols,&cols,&vals);CHKERRQ(ierr); 1153d24d4204SJose E. Roman } 1154d24d4204SJose E. Roman ierr = MatRestoreRowUpperTriangular(A);CHKERRQ(ierr); 1155d24d4204SJose E. Roman ierr = MatAssemblyBegin(mat_scal,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1156d24d4204SJose E. Roman ierr = MatAssemblyEnd(mat_scal,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1157d24d4204SJose E. Roman 1158d24d4204SJose E. Roman if (reuse == MAT_INPLACE_MATRIX) { ierr = MatHeaderReplace(A,&mat_scal);CHKERRQ(ierr); } 1159d24d4204SJose E. Roman else *newmat = mat_scal; 1160d24d4204SJose E. Roman PetscFunctionReturn(0); 1161d24d4204SJose E. Roman } 1162d24d4204SJose E. Roman 1163d24d4204SJose E. Roman static PetscErrorCode MatScaLAPACKSetPreallocation(Mat A) 1164d24d4204SJose E. Roman { 1165d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 1166d24d4204SJose E. Roman PetscErrorCode ierr; 1167d24d4204SJose E. Roman PetscInt sz=0; 1168d24d4204SJose E. Roman 1169d24d4204SJose E. Roman PetscFunctionBegin; 1170d24d4204SJose E. Roman ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 1171d24d4204SJose E. Roman ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 1172d24d4204SJose E. Roman if (!a->lld) a->lld = a->locr; 1173d24d4204SJose E. Roman 1174d24d4204SJose E. Roman ierr = PetscFree(a->loc);CHKERRQ(ierr); 1175d24d4204SJose E. Roman ierr = PetscIntMultError(a->lld,a->locc,&sz);CHKERRQ(ierr); 1176d24d4204SJose E. Roman ierr = PetscCalloc1(sz,&a->loc);CHKERRQ(ierr); 1177d24d4204SJose E. Roman ierr = PetscLogObjectMemory((PetscObject)A,sz*sizeof(PetscScalar));CHKERRQ(ierr); 1178d24d4204SJose E. Roman 1179d24d4204SJose E. Roman A->preallocated = PETSC_TRUE; 1180d24d4204SJose E. Roman PetscFunctionReturn(0); 1181d24d4204SJose E. Roman } 1182d24d4204SJose E. Roman 1183d24d4204SJose E. Roman static PetscErrorCode MatDestroy_ScaLAPACK(Mat A) 1184d24d4204SJose E. Roman { 1185d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 1186d24d4204SJose E. Roman PetscErrorCode ierr; 1187d24d4204SJose E. Roman Mat_ScaLAPACK_Grid *grid; 1188d24d4204SJose E. Roman PetscBool flg; 1189d24d4204SJose E. Roman MPI_Comm icomm; 1190d24d4204SJose E. Roman 1191d24d4204SJose E. Roman PetscFunctionBegin; 1192d24d4204SJose E. Roman ierr = MatStashDestroy_Private(&A->stash);CHKERRQ(ierr); 1193d24d4204SJose E. Roman ierr = PetscFree(a->loc);CHKERRQ(ierr); 1194d24d4204SJose E. Roman ierr = PetscFree(a->pivots);CHKERRQ(ierr); 1195d24d4204SJose E. Roman ierr = PetscCommDuplicate(PetscObjectComm((PetscObject)A),&icomm,NULL);CHKERRQ(ierr); 1196d24d4204SJose E. Roman ierr = MPI_Comm_get_attr(icomm,Petsc_ScaLAPACK_keyval,(void**)&grid,(int*)&flg);CHKERRQ(ierr); 1197d24d4204SJose E. Roman if (--grid->grid_refct == 0) { 1198d24d4204SJose E. Roman Cblacs_gridexit(grid->ictxt); 1199d24d4204SJose E. Roman Cblacs_gridexit(grid->ictxrow); 1200d24d4204SJose E. Roman Cblacs_gridexit(grid->ictxcol); 1201d24d4204SJose E. Roman ierr = PetscFree(grid);CHKERRQ(ierr); 1202*f7ec113fSDamian Marek ierr = MPI_Comm_delete_attr(icomm,Petsc_ScaLAPACK_keyval);CHKERRQ(ierr); 1203d24d4204SJose E. Roman } 1204d24d4204SJose E. Roman ierr = PetscCommDestroy(&icomm);CHKERRQ(ierr); 1205d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)A,"MatGetOwnershipIS_C",NULL);CHKERRQ(ierr); 1206d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 1207d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)A,"MatScaLAPACKSetBlockSizes_C",NULL);CHKERRQ(ierr); 1208d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)A,"MatScaLAPACKGetBlockSizes_C",NULL);CHKERRQ(ierr); 1209d24d4204SJose E. Roman ierr = PetscFree(A->data);CHKERRQ(ierr); 1210d24d4204SJose E. Roman PetscFunctionReturn(0); 1211d24d4204SJose E. Roman } 1212d24d4204SJose E. Roman 1213d24d4204SJose E. Roman PETSC_STATIC_INLINE PetscErrorCode MatScaLAPACKCheckLayout(PetscLayout map) 1214d24d4204SJose E. Roman { 1215d24d4204SJose E. Roman PetscErrorCode ierr; 1216d24d4204SJose E. Roman const PetscInt *ranges; 1217d24d4204SJose E. Roman PetscMPIInt size; 1218d24d4204SJose E. Roman PetscInt i,n; 1219d24d4204SJose E. Roman 1220d24d4204SJose E. Roman PetscFunctionBegin; 1221d24d4204SJose E. Roman ierr = MPI_Comm_size(map->comm,&size);CHKERRQ(ierr); 1222d24d4204SJose E. Roman if (size>2) { 1223d24d4204SJose E. Roman ierr = PetscLayoutGetRanges(map,&ranges);CHKERRQ(ierr); 1224d24d4204SJose E. Roman n = ranges[1]-ranges[0]; 1225d24d4204SJose E. Roman for (i=1;i<size-1;i++) if (ranges[i+1]-ranges[i]!=n) break; 1226d24d4204SJose E. Roman if (i<size-1 && ranges[i+1]-ranges[i]!=0 && ranges[i+2]-ranges[i+1]!=0) SETERRQ(map->comm,PETSC_ERR_SUP,"MATSCALAPACK must have equal local sizes in all processes (except possibly the last one), consider using MatCreateScaLAPACK"); 1227d24d4204SJose E. Roman } 1228d24d4204SJose E. Roman PetscFunctionReturn(0); 1229d24d4204SJose E. Roman } 1230d24d4204SJose E. Roman 1231d24d4204SJose E. Roman PetscErrorCode MatSetUp_ScaLAPACK(Mat A) 1232d24d4204SJose E. Roman { 1233d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 1234d24d4204SJose E. Roman PetscErrorCode ierr; 1235d24d4204SJose E. Roman PetscBLASInt info=0; 1236d24d4204SJose E. Roman 1237d24d4204SJose E. Roman PetscFunctionBegin; 1238d24d4204SJose E. Roman ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 1239d24d4204SJose E. Roman ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 1240d24d4204SJose E. Roman 1241d24d4204SJose E. Roman /* check that the layout is as enforced by MatCreateScaLAPACK */ 1242d24d4204SJose E. Roman ierr = MatScaLAPACKCheckLayout(A->rmap);CHKERRQ(ierr); 1243d24d4204SJose E. Roman ierr = MatScaLAPACKCheckLayout(A->cmap);CHKERRQ(ierr); 1244d24d4204SJose E. Roman 1245d24d4204SJose E. Roman /* compute local sizes */ 1246d24d4204SJose E. Roman ierr = PetscBLASIntCast(A->rmap->N,&a->M);CHKERRQ(ierr); 1247d24d4204SJose E. Roman ierr = PetscBLASIntCast(A->cmap->N,&a->N);CHKERRQ(ierr); 1248d24d4204SJose E. Roman a->locr = SCALAPACKnumroc_(&a->M,&a->mb,&a->grid->myrow,&a->rsrc,&a->grid->nprow); 1249d24d4204SJose E. Roman a->locc = SCALAPACKnumroc_(&a->N,&a->nb,&a->grid->mycol,&a->csrc,&a->grid->npcol); 1250d24d4204SJose E. Roman a->lld = PetscMax(1,a->locr); 1251d24d4204SJose E. Roman 1252d24d4204SJose E. Roman /* allocate local array */ 1253d24d4204SJose E. Roman ierr = MatScaLAPACKSetPreallocation(A);CHKERRQ(ierr); 1254d24d4204SJose E. Roman 1255d24d4204SJose E. Roman /* set up ScaLAPACK descriptor */ 1256d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKdescinit",SCALAPACKdescinit_(a->desc,&a->M,&a->N,&a->mb,&a->nb,&a->rsrc,&a->csrc,&a->grid->ictxt,&a->lld,&info)); 1257d24d4204SJose E. Roman PetscCheckScaLapackInfo("descinit",info); 1258d24d4204SJose E. Roman PetscFunctionReturn(0); 1259d24d4204SJose E. Roman } 1260d24d4204SJose E. Roman 1261d24d4204SJose E. Roman PetscErrorCode MatAssemblyBegin_ScaLAPACK(Mat A,MatAssemblyType type) 1262d24d4204SJose E. Roman { 1263d24d4204SJose E. Roman PetscErrorCode ierr; 1264d24d4204SJose E. Roman PetscInt nstash,reallocs; 1265d24d4204SJose E. Roman 1266d24d4204SJose E. Roman PetscFunctionBegin; 1267d24d4204SJose E. Roman if (A->nooffprocentries) PetscFunctionReturn(0); 1268d24d4204SJose E. Roman ierr = MatStashScatterBegin_Private(A,&A->stash,NULL);CHKERRQ(ierr); 1269d24d4204SJose E. Roman ierr = MatStashGetInfo_Private(&A->stash,&nstash,&reallocs);CHKERRQ(ierr); 1270d24d4204SJose E. Roman ierr = PetscInfo2(A,"Stash has %D entries, uses %D mallocs.\n",nstash,reallocs);CHKERRQ(ierr); 1271d24d4204SJose E. Roman PetscFunctionReturn(0); 1272d24d4204SJose E. Roman } 1273d24d4204SJose E. Roman 1274d24d4204SJose E. Roman PetscErrorCode MatAssemblyEnd_ScaLAPACK(Mat A,MatAssemblyType type) 1275d24d4204SJose E. Roman { 1276d24d4204SJose E. Roman PetscErrorCode ierr; 1277d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 1278d24d4204SJose E. Roman PetscMPIInt n; 1279d24d4204SJose E. Roman PetscInt i,flg,*row,*col; 1280d24d4204SJose E. Roman PetscScalar *val; 1281d24d4204SJose E. Roman PetscBLASInt gridx,gcidx,lridx,lcidx,rsrc,csrc; 1282d24d4204SJose E. Roman 1283d24d4204SJose E. Roman PetscFunctionBegin; 1284d24d4204SJose E. Roman if (A->nooffprocentries) PetscFunctionReturn(0); 1285d24d4204SJose E. Roman while (1) { 1286d24d4204SJose E. Roman ierr = MatStashScatterGetMesg_Private(&A->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr); 1287d24d4204SJose E. Roman if (!flg) break; 1288d24d4204SJose E. Roman for (i=0;i<n;i++) { 1289d24d4204SJose E. Roman ierr = PetscBLASIntCast(row[i]+1,&gridx);CHKERRQ(ierr); 1290d24d4204SJose E. Roman ierr = PetscBLASIntCast(col[i]+1,&gcidx);CHKERRQ(ierr); 1291d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKinfog2l",SCALAPACKinfog2l_(&gridx,&gcidx,a->desc,&a->grid->nprow,&a->grid->npcol,&a->grid->myrow,&a->grid->mycol,&lridx,&lcidx,&rsrc,&csrc)); 1292d24d4204SJose E. Roman if (rsrc!=a->grid->myrow || csrc!=a->grid->mycol) SETERRQ(PetscObjectComm((PetscObject)A),1,"Something went wrong, received value does not belong to this process"); 1293d24d4204SJose E. Roman switch (A->insertmode) { 1294d24d4204SJose E. Roman case INSERT_VALUES: a->loc[lridx-1+(lcidx-1)*a->lld] = val[i]; break; 1295d24d4204SJose E. Roman case ADD_VALUES: a->loc[lridx-1+(lcidx-1)*a->lld] += val[i]; break; 1296d24d4204SJose E. Roman default: SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for InsertMode %d",(int)A->insertmode); 1297d24d4204SJose E. Roman } 1298d24d4204SJose E. Roman } 1299d24d4204SJose E. Roman } 1300d24d4204SJose E. Roman ierr = MatStashScatterEnd_Private(&A->stash);CHKERRQ(ierr); 1301d24d4204SJose E. Roman PetscFunctionReturn(0); 1302d24d4204SJose E. Roman } 1303d24d4204SJose E. Roman 1304d24d4204SJose E. Roman PetscErrorCode MatLoad_ScaLAPACK(Mat newMat,PetscViewer viewer) 1305d24d4204SJose E. Roman { 1306d24d4204SJose E. Roman PetscErrorCode ierr; 1307d24d4204SJose E. Roman Mat Adense,As; 1308d24d4204SJose E. Roman MPI_Comm comm; 1309d24d4204SJose E. Roman 1310d24d4204SJose E. Roman PetscFunctionBegin; 1311d24d4204SJose E. Roman ierr = PetscObjectGetComm((PetscObject)newMat,&comm);CHKERRQ(ierr); 1312d24d4204SJose E. Roman ierr = MatCreate(comm,&Adense);CHKERRQ(ierr); 1313d24d4204SJose E. Roman ierr = MatSetType(Adense,MATDENSE);CHKERRQ(ierr); 1314d24d4204SJose E. Roman ierr = MatLoad(Adense,viewer);CHKERRQ(ierr); 1315d24d4204SJose E. Roman ierr = MatConvert(Adense,MATSCALAPACK,MAT_INITIAL_MATRIX,&As);CHKERRQ(ierr); 1316d24d4204SJose E. Roman ierr = MatDestroy(&Adense);CHKERRQ(ierr); 1317d24d4204SJose E. Roman ierr = MatHeaderReplace(newMat,&As);CHKERRQ(ierr); 1318d24d4204SJose E. Roman PetscFunctionReturn(0); 1319d24d4204SJose E. Roman } 1320d24d4204SJose E. Roman 1321d24d4204SJose E. Roman /* -------------------------------------------------------------------*/ 1322d24d4204SJose E. Roman static struct _MatOps MatOps_Values = { 1323d24d4204SJose E. Roman MatSetValues_ScaLAPACK, 1324d24d4204SJose E. Roman 0, 1325d24d4204SJose E. Roman 0, 1326d24d4204SJose E. Roman MatMult_ScaLAPACK, 1327d24d4204SJose E. Roman /* 4*/ MatMultAdd_ScaLAPACK, 1328d24d4204SJose E. Roman MatMultTranspose_ScaLAPACK, 1329d24d4204SJose E. Roman MatMultTransposeAdd_ScaLAPACK, 1330d24d4204SJose E. Roman MatSolve_ScaLAPACK, 1331d24d4204SJose E. Roman MatSolveAdd_ScaLAPACK, 1332d24d4204SJose E. Roman 0, 1333d24d4204SJose E. Roman /*10*/ 0, 1334d24d4204SJose E. Roman MatLUFactor_ScaLAPACK, 1335d24d4204SJose E. Roman MatCholeskyFactor_ScaLAPACK, 1336d24d4204SJose E. Roman 0, 1337d24d4204SJose E. Roman MatTranspose_ScaLAPACK, 1338d24d4204SJose E. Roman /*15*/ MatGetInfo_ScaLAPACK, 1339d24d4204SJose E. Roman 0, 1340d24d4204SJose E. Roman MatGetDiagonal_ScaLAPACK, 1341d24d4204SJose E. Roman MatDiagonalScale_ScaLAPACK, 1342d24d4204SJose E. Roman MatNorm_ScaLAPACK, 1343d24d4204SJose E. Roman /*20*/ MatAssemblyBegin_ScaLAPACK, 1344d24d4204SJose E. Roman MatAssemblyEnd_ScaLAPACK, 1345d24d4204SJose E. Roman MatSetOption_ScaLAPACK, 1346d24d4204SJose E. Roman MatZeroEntries_ScaLAPACK, 1347d24d4204SJose E. Roman /*24*/ 0, 1348d24d4204SJose E. Roman MatLUFactorSymbolic_ScaLAPACK, 1349d24d4204SJose E. Roman MatLUFactorNumeric_ScaLAPACK, 1350d24d4204SJose E. Roman MatCholeskyFactorSymbolic_ScaLAPACK, 1351d24d4204SJose E. Roman MatCholeskyFactorNumeric_ScaLAPACK, 1352d24d4204SJose E. Roman /*29*/ MatSetUp_ScaLAPACK, 1353d24d4204SJose E. Roman 0, 1354d24d4204SJose E. Roman 0, 1355d24d4204SJose E. Roman 0, 1356d24d4204SJose E. Roman 0, 1357d24d4204SJose E. Roman /*34*/ MatDuplicate_ScaLAPACK, 1358d24d4204SJose E. Roman 0, 1359d24d4204SJose E. Roman 0, 1360d24d4204SJose E. Roman 0, 1361d24d4204SJose E. Roman 0, 1362d24d4204SJose E. Roman /*39*/ MatAXPY_ScaLAPACK, 1363d24d4204SJose E. Roman 0, 1364d24d4204SJose E. Roman 0, 1365d24d4204SJose E. Roman 0, 1366d24d4204SJose E. Roman MatCopy_ScaLAPACK, 1367d24d4204SJose E. Roman /*44*/ 0, 1368d24d4204SJose E. Roman MatScale_ScaLAPACK, 1369d24d4204SJose E. Roman MatShift_ScaLAPACK, 1370d24d4204SJose E. Roman 0, 1371d24d4204SJose E. Roman 0, 1372d24d4204SJose E. Roman /*49*/ 0, 1373d24d4204SJose E. Roman 0, 1374d24d4204SJose E. Roman 0, 1375d24d4204SJose E. Roman 0, 1376d24d4204SJose E. Roman 0, 1377d24d4204SJose E. Roman /*54*/ 0, 1378d24d4204SJose E. Roman 0, 1379d24d4204SJose E. Roman 0, 1380d24d4204SJose E. Roman 0, 1381d24d4204SJose E. Roman 0, 1382d24d4204SJose E. Roman /*59*/ 0, 1383d24d4204SJose E. Roman MatDestroy_ScaLAPACK, 1384d24d4204SJose E. Roman MatView_ScaLAPACK, 1385d24d4204SJose E. Roman 0, 1386d24d4204SJose E. Roman 0, 1387d24d4204SJose E. Roman /*64*/ 0, 1388d24d4204SJose E. Roman 0, 1389d24d4204SJose E. Roman 0, 1390d24d4204SJose E. Roman 0, 1391d24d4204SJose E. Roman 0, 1392d24d4204SJose E. Roman /*69*/ 0, 1393d24d4204SJose E. Roman 0, 1394d24d4204SJose E. Roman MatConvert_ScaLAPACK_Dense, 1395d24d4204SJose E. Roman 0, 1396d24d4204SJose E. Roman 0, 1397d24d4204SJose E. Roman /*74*/ 0, 1398d24d4204SJose E. Roman 0, 1399d24d4204SJose E. Roman 0, 1400d24d4204SJose E. Roman 0, 1401d24d4204SJose E. Roman 0, 1402d24d4204SJose E. Roman /*79*/ 0, 1403d24d4204SJose E. Roman 0, 1404d24d4204SJose E. Roman 0, 1405d24d4204SJose E. Roman 0, 1406d24d4204SJose E. Roman MatLoad_ScaLAPACK, 1407d24d4204SJose E. Roman /*84*/ 0, 1408d24d4204SJose E. Roman 0, 1409d24d4204SJose E. Roman 0, 1410d24d4204SJose E. Roman 0, 1411d24d4204SJose E. Roman 0, 1412d24d4204SJose E. Roman /*89*/ 0, 1413d24d4204SJose E. Roman 0, 1414d24d4204SJose E. Roman MatMatMultNumeric_ScaLAPACK, 1415d24d4204SJose E. Roman 0, 1416d24d4204SJose E. Roman 0, 1417d24d4204SJose E. Roman /*94*/ 0, 1418d24d4204SJose E. Roman 0, 1419d24d4204SJose E. Roman 0, 1420d24d4204SJose E. Roman MatMatTransposeMultNumeric_ScaLAPACK, 1421d24d4204SJose E. Roman 0, 1422d24d4204SJose E. Roman /*99*/ MatProductSetFromOptions_ScaLAPACK, 1423d24d4204SJose E. Roman 0, 1424d24d4204SJose E. Roman 0, 1425d24d4204SJose E. Roman MatConjugate_ScaLAPACK, 1426d24d4204SJose E. Roman 0, 1427d24d4204SJose E. Roman /*104*/0, 1428d24d4204SJose E. Roman 0, 1429d24d4204SJose E. Roman 0, 1430d24d4204SJose E. Roman 0, 1431d24d4204SJose E. Roman 0, 1432d24d4204SJose E. Roman /*109*/MatMatSolve_ScaLAPACK, 1433d24d4204SJose E. Roman 0, 1434d24d4204SJose E. Roman 0, 1435d24d4204SJose E. Roman 0, 1436d24d4204SJose E. Roman MatMissingDiagonal_ScaLAPACK, 1437d24d4204SJose E. Roman /*114*/0, 1438d24d4204SJose E. Roman 0, 1439d24d4204SJose E. Roman 0, 1440d24d4204SJose E. Roman 0, 1441d24d4204SJose E. Roman 0, 1442d24d4204SJose E. Roman /*119*/0, 1443d24d4204SJose E. Roman MatHermitianTranspose_ScaLAPACK, 1444d24d4204SJose E. Roman 0, 1445d24d4204SJose E. Roman 0, 1446d24d4204SJose E. Roman 0, 1447d24d4204SJose E. Roman /*124*/0, 1448d24d4204SJose E. Roman 0, 1449d24d4204SJose E. Roman 0, 1450d24d4204SJose E. Roman 0, 1451d24d4204SJose E. Roman 0, 1452d24d4204SJose E. Roman /*129*/0, 1453d24d4204SJose E. Roman 0, 1454d24d4204SJose E. Roman 0, 1455d24d4204SJose E. Roman 0, 1456d24d4204SJose E. Roman 0, 1457d24d4204SJose E. Roman /*134*/0, 1458d24d4204SJose E. Roman 0, 1459d24d4204SJose E. Roman 0, 1460d24d4204SJose E. Roman 0, 1461d24d4204SJose E. Roman 0, 1462d24d4204SJose E. Roman 0, 1463d24d4204SJose E. Roman /*140*/0, 1464d24d4204SJose E. Roman 0, 1465d24d4204SJose E. Roman 0, 1466d24d4204SJose E. Roman 0, 1467d24d4204SJose E. Roman 0, 1468d24d4204SJose E. Roman /*145*/0, 1469d24d4204SJose E. Roman 0, 1470d24d4204SJose E. Roman 0 1471d24d4204SJose E. Roman }; 1472d24d4204SJose E. Roman 1473d24d4204SJose E. Roman static PetscErrorCode MatStashScatterBegin_ScaLAPACK(Mat mat,MatStash *stash,PetscInt *owners) 1474d24d4204SJose E. Roman { 1475d24d4204SJose E. Roman PetscInt *owner,*startv,*starti,tag1=stash->tag1,tag2=stash->tag2,bs2; 1476d24d4204SJose E. Roman PetscInt size=stash->size,nsends; 1477d24d4204SJose E. Roman PetscErrorCode ierr; 1478d24d4204SJose E. Roman PetscInt count,*sindices,**rindices,i,j,l; 1479d24d4204SJose E. Roman PetscScalar **rvalues,*svalues; 1480d24d4204SJose E. Roman MPI_Comm comm = stash->comm; 1481d24d4204SJose E. Roman MPI_Request *send_waits,*recv_waits,*recv_waits1,*recv_waits2; 1482d24d4204SJose E. Roman PetscMPIInt *sizes,*nlengths,nreceives; 1483d24d4204SJose E. Roman PetscInt *sp_idx,*sp_idy; 1484d24d4204SJose E. Roman PetscScalar *sp_val; 1485d24d4204SJose E. Roman PetscMatStashSpace space,space_next; 1486d24d4204SJose E. Roman PetscBLASInt gridx,gcidx,lridx,lcidx,rsrc,csrc; 1487d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)mat->data; 1488d24d4204SJose E. Roman 1489d24d4204SJose E. Roman PetscFunctionBegin; 1490d24d4204SJose E. Roman { /* make sure all processors are either in INSERTMODE or ADDMODE */ 1491d24d4204SJose E. Roman InsertMode addv; 1492d24d4204SJose E. Roman ierr = MPIU_Allreduce((PetscEnum*)&mat->insertmode,(PetscEnum*)&addv,1,MPIU_ENUM,MPI_BOR,PetscObjectComm((PetscObject)mat));CHKERRQ(ierr); 1493d24d4204SJose E. Roman if (addv == (ADD_VALUES|INSERT_VALUES)) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added"); 1494d24d4204SJose E. Roman mat->insertmode = addv; /* in case this processor had no cache */ 1495d24d4204SJose E. Roman } 1496d24d4204SJose E. Roman 1497d24d4204SJose E. Roman bs2 = stash->bs*stash->bs; 1498d24d4204SJose E. Roman 1499d24d4204SJose E. Roman /* first count number of contributors to each processor */ 1500d24d4204SJose E. Roman ierr = PetscCalloc1(size,&nlengths);CHKERRQ(ierr); 1501d24d4204SJose E. Roman ierr = PetscMalloc1(stash->n+1,&owner);CHKERRQ(ierr); 1502d24d4204SJose E. Roman 1503d24d4204SJose E. Roman i = j = 0; 1504d24d4204SJose E. Roman space = stash->space_head; 1505d24d4204SJose E. Roman while (space) { 1506d24d4204SJose E. Roman space_next = space->next; 1507d24d4204SJose E. Roman for (l=0; l<space->local_used; l++) { 1508d24d4204SJose E. Roman ierr = PetscBLASIntCast(space->idx[l]+1,&gridx);CHKERRQ(ierr); 1509d24d4204SJose E. Roman ierr = PetscBLASIntCast(space->idy[l]+1,&gcidx);CHKERRQ(ierr); 1510d24d4204SJose E. Roman PetscStackCallBLAS("SCALAPACKinfog2l",SCALAPACKinfog2l_(&gridx,&gcidx,a->desc,&a->grid->nprow,&a->grid->npcol,&a->grid->myrow,&a->grid->mycol,&lridx,&lcidx,&rsrc,&csrc)); 1511d24d4204SJose E. Roman j = Cblacs_pnum(a->grid->ictxt,rsrc,csrc); 1512d24d4204SJose E. Roman nlengths[j]++; owner[i] = j; 1513d24d4204SJose E. Roman i++; 1514d24d4204SJose E. Roman } 1515d24d4204SJose E. Roman space = space_next; 1516d24d4204SJose E. Roman } 1517d24d4204SJose E. Roman 1518d24d4204SJose E. Roman /* Now check what procs get messages - and compute nsends. */ 1519d24d4204SJose E. Roman ierr = PetscCalloc1(size,&sizes);CHKERRQ(ierr); 1520d24d4204SJose E. Roman for (i=0, nsends=0; i<size; i++) { 1521d24d4204SJose E. Roman if (nlengths[i]) { 1522d24d4204SJose E. Roman sizes[i] = 1; nsends++; 1523d24d4204SJose E. Roman } 1524d24d4204SJose E. Roman } 1525d24d4204SJose E. Roman 1526d24d4204SJose E. Roman {PetscMPIInt *onodes,*olengths; 1527d24d4204SJose E. Roman /* Determine the number of messages to expect, their lengths, from from-ids */ 1528d24d4204SJose E. Roman ierr = PetscGatherNumberOfMessages(comm,sizes,nlengths,&nreceives);CHKERRQ(ierr); 1529d24d4204SJose E. Roman ierr = PetscGatherMessageLengths(comm,nsends,nreceives,nlengths,&onodes,&olengths);CHKERRQ(ierr); 1530d24d4204SJose E. Roman /* since clubbing row,col - lengths are multiplied by 2 */ 1531d24d4204SJose E. Roman for (i=0; i<nreceives; i++) olengths[i] *=2; 1532d24d4204SJose E. Roman ierr = PetscPostIrecvInt(comm,tag1,nreceives,onodes,olengths,&rindices,&recv_waits1);CHKERRQ(ierr); 1533d24d4204SJose E. Roman /* values are size 'bs2' lengths (and remove earlier factor 2 */ 1534d24d4204SJose E. Roman for (i=0; i<nreceives; i++) olengths[i] = olengths[i]*bs2/2; 1535d24d4204SJose E. Roman ierr = PetscPostIrecvScalar(comm,tag2,nreceives,onodes,olengths,&rvalues,&recv_waits2);CHKERRQ(ierr); 1536d24d4204SJose E. Roman ierr = PetscFree(onodes);CHKERRQ(ierr); 1537d24d4204SJose E. Roman ierr = PetscFree(olengths);CHKERRQ(ierr);} 1538d24d4204SJose E. Roman 1539d24d4204SJose E. Roman /* do sends: 1540d24d4204SJose E. Roman 1) starts[i] gives the starting index in svalues for stuff going to 1541d24d4204SJose E. Roman the ith processor 1542d24d4204SJose E. Roman */ 1543d24d4204SJose E. Roman ierr = PetscMalloc2(bs2*stash->n,&svalues,2*(stash->n+1),&sindices);CHKERRQ(ierr); 1544d24d4204SJose E. Roman ierr = PetscMalloc1(2*nsends,&send_waits);CHKERRQ(ierr); 1545d24d4204SJose E. Roman ierr = PetscMalloc2(size,&startv,size,&starti);CHKERRQ(ierr); 1546d24d4204SJose E. Roman /* use 2 sends the first with all_a, the next with all_i and all_j */ 1547d24d4204SJose E. Roman startv[0] = 0; starti[0] = 0; 1548d24d4204SJose E. Roman for (i=1; i<size; i++) { 1549d24d4204SJose E. Roman startv[i] = startv[i-1] + nlengths[i-1]; 1550d24d4204SJose E. Roman starti[i] = starti[i-1] + 2*nlengths[i-1]; 1551d24d4204SJose E. Roman } 1552d24d4204SJose E. Roman 1553d24d4204SJose E. Roman i = 0; 1554d24d4204SJose E. Roman space = stash->space_head; 1555d24d4204SJose E. Roman while (space) { 1556d24d4204SJose E. Roman space_next = space->next; 1557d24d4204SJose E. Roman sp_idx = space->idx; 1558d24d4204SJose E. Roman sp_idy = space->idy; 1559d24d4204SJose E. Roman sp_val = space->val; 1560d24d4204SJose E. Roman for (l=0; l<space->local_used; l++) { 1561d24d4204SJose E. Roman j = owner[i]; 1562d24d4204SJose E. Roman if (bs2 == 1) { 1563d24d4204SJose E. Roman svalues[startv[j]] = sp_val[l]; 1564d24d4204SJose E. Roman } else { 1565d24d4204SJose E. Roman PetscInt k; 1566d24d4204SJose E. Roman PetscScalar *buf1,*buf2; 1567d24d4204SJose E. Roman buf1 = svalues+bs2*startv[j]; 1568d24d4204SJose E. Roman buf2 = space->val + bs2*l; 1569d24d4204SJose E. Roman for (k=0; k<bs2; k++) buf1[k] = buf2[k]; 1570d24d4204SJose E. Roman } 1571d24d4204SJose E. Roman sindices[starti[j]] = sp_idx[l]; 1572d24d4204SJose E. Roman sindices[starti[j]+nlengths[j]] = sp_idy[l]; 1573d24d4204SJose E. Roman startv[j]++; 1574d24d4204SJose E. Roman starti[j]++; 1575d24d4204SJose E. Roman i++; 1576d24d4204SJose E. Roman } 1577d24d4204SJose E. Roman space = space_next; 1578d24d4204SJose E. Roman } 1579d24d4204SJose E. Roman startv[0] = 0; 1580d24d4204SJose E. Roman for (i=1; i<size; i++) startv[i] = startv[i-1] + nlengths[i-1]; 1581d24d4204SJose E. Roman 1582d24d4204SJose E. Roman for (i=0,count=0; i<size; i++) { 1583d24d4204SJose E. Roman if (sizes[i]) { 1584d24d4204SJose E. Roman ierr = MPI_Isend(sindices+2*startv[i],2*nlengths[i],MPIU_INT,i,tag1,comm,send_waits+count++);CHKERRQ(ierr); 1585d24d4204SJose E. Roman ierr = MPI_Isend(svalues+bs2*startv[i],bs2*nlengths[i],MPIU_SCALAR,i,tag2,comm,send_waits+count++);CHKERRQ(ierr); 1586d24d4204SJose E. Roman } 1587d24d4204SJose E. Roman } 1588d24d4204SJose E. Roman #if defined(PETSC_USE_INFO) 1589d24d4204SJose E. Roman ierr = PetscInfo1(NULL,"No of messages: %d \n",nsends);CHKERRQ(ierr); 1590d24d4204SJose E. Roman for (i=0; i<size; i++) { 1591d24d4204SJose E. Roman if (sizes[i]) { 1592d24d4204SJose E. Roman ierr = PetscInfo2(NULL,"Mesg_to: %d: size: %d bytes\n",i,nlengths[i]*(bs2*sizeof(PetscScalar)+2*sizeof(PetscInt)));CHKERRQ(ierr); 1593d24d4204SJose E. Roman } 1594d24d4204SJose E. Roman } 1595d24d4204SJose E. Roman #endif 1596d24d4204SJose E. Roman ierr = PetscFree(nlengths);CHKERRQ(ierr); 1597d24d4204SJose E. Roman ierr = PetscFree(owner);CHKERRQ(ierr); 1598d24d4204SJose E. Roman ierr = PetscFree2(startv,starti);CHKERRQ(ierr); 1599d24d4204SJose E. Roman ierr = PetscFree(sizes);CHKERRQ(ierr); 1600d24d4204SJose E. Roman 1601d24d4204SJose E. Roman /* recv_waits need to be contiguous for MatStashScatterGetMesg_Private() */ 1602d24d4204SJose E. Roman ierr = PetscMalloc1(2*nreceives,&recv_waits);CHKERRQ(ierr); 1603d24d4204SJose E. Roman 1604d24d4204SJose E. Roman for (i=0; i<nreceives; i++) { 1605d24d4204SJose E. Roman recv_waits[2*i] = recv_waits1[i]; 1606d24d4204SJose E. Roman recv_waits[2*i+1] = recv_waits2[i]; 1607d24d4204SJose E. Roman } 1608d24d4204SJose E. Roman stash->recv_waits = recv_waits; 1609d24d4204SJose E. Roman 1610d24d4204SJose E. Roman ierr = PetscFree(recv_waits1);CHKERRQ(ierr); 1611d24d4204SJose E. Roman ierr = PetscFree(recv_waits2);CHKERRQ(ierr); 1612d24d4204SJose E. Roman 1613d24d4204SJose E. Roman stash->svalues = svalues; 1614d24d4204SJose E. Roman stash->sindices = sindices; 1615d24d4204SJose E. Roman stash->rvalues = rvalues; 1616d24d4204SJose E. Roman stash->rindices = rindices; 1617d24d4204SJose E. Roman stash->send_waits = send_waits; 1618d24d4204SJose E. Roman stash->nsends = nsends; 1619d24d4204SJose E. Roman stash->nrecvs = nreceives; 1620d24d4204SJose E. Roman stash->reproduce_count = 0; 1621d24d4204SJose E. Roman PetscFunctionReturn(0); 1622d24d4204SJose E. Roman } 1623d24d4204SJose E. Roman 1624d24d4204SJose E. Roman static PetscErrorCode MatScaLAPACKSetBlockSizes_ScaLAPACK(Mat A,PetscInt mb,PetscInt nb) 1625d24d4204SJose E. Roman { 1626d24d4204SJose E. Roman PetscErrorCode ierr; 1627d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 1628d24d4204SJose E. Roman 1629d24d4204SJose E. Roman PetscFunctionBegin; 1630d24d4204SJose E. Roman if (A->preallocated) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Cannot change block sizes after MatSetUp"); 1631d24d4204SJose E. Roman if (mb<1 && mb!=PETSC_DECIDE) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"mb %D must be at least 1",mb); 1632d24d4204SJose E. Roman if (nb<1 && nb!=PETSC_DECIDE) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"nb %D must be at least 1",nb); 1633d24d4204SJose E. Roman ierr = PetscBLASIntCast((mb==PETSC_DECIDE)?DEFAULT_BLOCKSIZE:mb,&a->mb);CHKERRQ(ierr); 1634d24d4204SJose E. Roman ierr = PetscBLASIntCast((nb==PETSC_DECIDE)?a->mb:nb,&a->nb);CHKERRQ(ierr); 1635d24d4204SJose E. Roman PetscFunctionReturn(0); 1636d24d4204SJose E. Roman } 1637d24d4204SJose E. Roman 1638d24d4204SJose E. Roman /*@ 1639d24d4204SJose E. Roman MatScaLAPACKSetBlockSizes - Sets the block sizes to be used for the distibution of 1640d24d4204SJose E. Roman the ScaLAPACK matrix 1641d24d4204SJose E. Roman 1642d24d4204SJose E. Roman Logically Collective on A 1643d24d4204SJose E. Roman 1644d24d4204SJose E. Roman Input Parameter: 1645d24d4204SJose E. Roman + A - a MATSCALAPACK matrix 1646d24d4204SJose E. Roman . mb - the row block size 1647d24d4204SJose E. Roman - nb - the column block size 1648d24d4204SJose E. Roman 1649d24d4204SJose E. Roman Level: intermediate 1650d24d4204SJose E. Roman 1651d24d4204SJose E. Roman .seealso: MatCreateScaLAPACK(), MatScaLAPACKGetBlockSizes() 1652d24d4204SJose E. Roman @*/ 1653d24d4204SJose E. Roman PetscErrorCode MatScaLAPACKSetBlockSizes(Mat A,PetscInt mb,PetscInt nb) 1654d24d4204SJose E. Roman { 1655d24d4204SJose E. Roman PetscErrorCode ierr; 1656d24d4204SJose E. Roman 1657d24d4204SJose E. Roman PetscFunctionBegin; 1658d24d4204SJose E. Roman PetscValidHeaderSpecific(A,MAT_CLASSID,1); 1659d24d4204SJose E. Roman PetscValidLogicalCollectiveInt(A,mb,2); 1660d24d4204SJose E. Roman PetscValidLogicalCollectiveInt(A,nb,3); 1661d24d4204SJose E. Roman ierr = PetscTryMethod(A,"MatScaLAPACKSetBlockSizes_C",(Mat,PetscInt,PetscInt),(A,mb,nb));CHKERRQ(ierr); 1662d24d4204SJose E. Roman PetscFunctionReturn(0); 1663d24d4204SJose E. Roman } 1664d24d4204SJose E. Roman 1665d24d4204SJose E. Roman static PetscErrorCode MatScaLAPACKGetBlockSizes_ScaLAPACK(Mat A,PetscInt *mb,PetscInt *nb) 1666d24d4204SJose E. Roman { 1667d24d4204SJose E. Roman Mat_ScaLAPACK *a = (Mat_ScaLAPACK*)A->data; 1668d24d4204SJose E. Roman 1669d24d4204SJose E. Roman PetscFunctionBegin; 1670d24d4204SJose E. Roman if (mb) *mb = a->mb; 1671d24d4204SJose E. Roman if (nb) *nb = a->nb; 1672d24d4204SJose E. Roman PetscFunctionReturn(0); 1673d24d4204SJose E. Roman } 1674d24d4204SJose E. Roman 1675d24d4204SJose E. Roman /*@ 1676d24d4204SJose E. Roman MatScaLAPACKGetBlockSizes - Gets the block sizes used in the distibution of 1677d24d4204SJose E. Roman the ScaLAPACK matrix 1678d24d4204SJose E. Roman 1679d24d4204SJose E. Roman Not collective 1680d24d4204SJose E. Roman 1681d24d4204SJose E. Roman Input Parameter: 1682d24d4204SJose E. Roman . A - a MATSCALAPACK matrix 1683d24d4204SJose E. Roman 1684d24d4204SJose E. Roman Output Parameters: 1685d24d4204SJose E. Roman + mb - the row block size 1686d24d4204SJose E. Roman - nb - the column block size 1687d24d4204SJose E. Roman 1688d24d4204SJose E. Roman Level: intermediate 1689d24d4204SJose E. Roman 1690d24d4204SJose E. Roman .seealso: MatCreateScaLAPACK(), MatScaLAPACKSetBlockSizes() 1691d24d4204SJose E. Roman @*/ 1692d24d4204SJose E. Roman PetscErrorCode MatScaLAPACKGetBlockSizes(Mat A,PetscInt *mb,PetscInt *nb) 1693d24d4204SJose E. Roman { 1694d24d4204SJose E. Roman PetscErrorCode ierr; 1695d24d4204SJose E. Roman 1696d24d4204SJose E. Roman PetscFunctionBegin; 1697d24d4204SJose E. Roman PetscValidHeaderSpecific(A,MAT_CLASSID,1); 1698d24d4204SJose E. Roman ierr = PetscUseMethod(A,"MatScaLAPACKGetBlockSizes_C",(Mat,PetscInt*,PetscInt*),(A,mb,nb));CHKERRQ(ierr); 1699d24d4204SJose E. Roman PetscFunctionReturn(0); 1700d24d4204SJose E. Roman } 1701d24d4204SJose E. Roman 1702d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatStashScatterGetMesg_Ref(MatStash*,PetscMPIInt*,PetscInt**,PetscInt**,PetscScalar**,PetscInt*); 1703d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatStashScatterEnd_Ref(MatStash*); 1704d24d4204SJose E. Roman 1705d24d4204SJose E. Roman /*MC 1706d24d4204SJose E. Roman MATSCALAPACK = "scalapack" - A matrix type for dense matrices using the ScaLAPACK package 1707d24d4204SJose E. Roman 1708d24d4204SJose E. Roman Use ./configure --download-scalapack to install PETSc to use ScaLAPACK 1709d24d4204SJose E. Roman 1710d24d4204SJose E. Roman Use -pc_type lu -pc_factor_mat_solver_type scalapack to use this direct solver 1711d24d4204SJose E. Roman 1712d24d4204SJose E. Roman Options Database Keys: 1713d24d4204SJose E. Roman + -mat_type scalapack - sets the matrix type to "scalapack" during a call to MatSetFromOptions() 1714d24d4204SJose E. Roman . -mat_scalapack_grid_height - sets Grid Height for 2D cyclic ordering of internal matrix 1715d24d4204SJose E. Roman - -mat_scalapack_block_sizes - size of the blocks to use (one or two integers separated by comma) 1716d24d4204SJose E. Roman 1717d24d4204SJose E. Roman Level: beginner 1718d24d4204SJose E. Roman 1719d24d4204SJose E. Roman .seealso: MATDENSE, MATELEMENTAL 1720d24d4204SJose E. Roman M*/ 1721d24d4204SJose E. Roman 1722d24d4204SJose E. Roman PETSC_EXTERN PetscErrorCode MatCreate_ScaLAPACK(Mat A) 1723d24d4204SJose E. Roman { 1724d24d4204SJose E. Roman Mat_ScaLAPACK *a; 1725d24d4204SJose E. Roman PetscErrorCode ierr; 1726d24d4204SJose E. Roman PetscBool flg,flg1; 1727d24d4204SJose E. Roman Mat_ScaLAPACK_Grid *grid; 1728d24d4204SJose E. Roman MPI_Comm icomm; 1729d24d4204SJose E. Roman PetscBLASInt nprow,npcol,myrow,mycol; 1730d24d4204SJose E. Roman PetscInt optv1,k=2,array[2]={0,0}; 1731d24d4204SJose E. Roman PetscMPIInt size; 1732d24d4204SJose E. Roman 1733d24d4204SJose E. Roman PetscFunctionBegin; 1734d24d4204SJose E. Roman ierr = PetscMemcpy(A->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr); 1735d24d4204SJose E. Roman A->insertmode = NOT_SET_VALUES; 1736d24d4204SJose E. Roman 1737d24d4204SJose E. Roman ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)A),1,&A->stash);CHKERRQ(ierr); 1738d24d4204SJose E. Roman A->stash.ScatterBegin = MatStashScatterBegin_ScaLAPACK; 1739d24d4204SJose E. Roman A->stash.ScatterGetMesg = MatStashScatterGetMesg_Ref; 1740d24d4204SJose E. Roman A->stash.ScatterEnd = MatStashScatterEnd_Ref; 1741d24d4204SJose E. Roman A->stash.ScatterDestroy = NULL; 1742d24d4204SJose E. Roman 1743d24d4204SJose E. Roman ierr = PetscNewLog(A,&a);CHKERRQ(ierr); 1744d24d4204SJose E. Roman A->data = (void*)a; 1745d24d4204SJose E. Roman 1746d24d4204SJose E. Roman /* Grid needs to be shared between multiple Mats on the same communicator, implement by attribute caching on the MPI_Comm */ 1747d24d4204SJose E. Roman if (Petsc_ScaLAPACK_keyval == MPI_KEYVAL_INVALID) { 1748d24d4204SJose E. Roman ierr = MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN,MPI_COMM_NULL_DELETE_FN,&Petsc_ScaLAPACK_keyval,(void*)0);CHKERRQ(ierr); 1749*f7ec113fSDamian Marek ierr = PetscRegisterFinalize(Petsc_ScaLAPACK_keyval_free);CHKERRQ(ierr); 1750d24d4204SJose E. Roman } 1751d24d4204SJose E. Roman ierr = PetscCommDuplicate(PetscObjectComm((PetscObject)A),&icomm,NULL);CHKERRQ(ierr); 1752d24d4204SJose E. Roman ierr = MPI_Comm_get_attr(icomm,Petsc_ScaLAPACK_keyval,(void**)&grid,(int*)&flg);CHKERRQ(ierr); 1753d24d4204SJose E. Roman if (!flg) { 1754d24d4204SJose E. Roman ierr = PetscNewLog(A,&grid);CHKERRQ(ierr); 1755d24d4204SJose E. Roman 1756d24d4204SJose E. Roman ierr = MPI_Comm_size(icomm,&size);CHKERRQ(ierr); 1757d24d4204SJose E. Roman grid->nprow = (PetscInt) (PetscSqrtReal((PetscReal)size) + 0.001); 1758d24d4204SJose E. Roman 1759d24d4204SJose E. Roman ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"ScaLAPACK Grid Options","Mat");CHKERRQ(ierr); 1760d24d4204SJose E. Roman ierr = PetscOptionsInt("-mat_scalapack_grid_height","Grid Height","None",grid->nprow,&optv1,&flg1);CHKERRQ(ierr); 1761d24d4204SJose E. Roman if (flg1) { 1762d24d4204SJose E. Roman if (size % optv1) SETERRQ2(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_INCOMP,"Grid Height %D must evenly divide CommSize %D",optv1,size); 1763d24d4204SJose E. Roman grid->nprow = optv1; 1764d24d4204SJose E. Roman } 1765d24d4204SJose E. Roman ierr = PetscOptionsEnd();CHKERRQ(ierr); 1766d24d4204SJose E. Roman 1767d24d4204SJose E. Roman if (size % grid->nprow) grid->nprow = 1; /* cannot use a squarish grid, use a 1d grid */ 1768d24d4204SJose E. Roman grid->npcol = size/grid->nprow; 1769d24d4204SJose E. Roman ierr = PetscBLASIntCast(grid->nprow,&nprow);CHKERRQ(ierr); 1770d24d4204SJose E. Roman ierr = PetscBLASIntCast(grid->npcol,&npcol);CHKERRQ(ierr); 1771*f7ec113fSDamian Marek grid->ictxt = Csys2blacs_handle(icomm); 1772d24d4204SJose E. Roman Cblacs_gridinit(&grid->ictxt,"R",nprow,npcol); 1773d24d4204SJose E. Roman Cblacs_gridinfo(grid->ictxt,&nprow,&npcol,&myrow,&mycol); 1774d24d4204SJose E. Roman grid->grid_refct = 1; 1775d24d4204SJose E. Roman grid->nprow = nprow; 1776d24d4204SJose E. Roman grid->npcol = npcol; 1777d24d4204SJose E. Roman grid->myrow = myrow; 1778d24d4204SJose E. Roman grid->mycol = mycol; 1779d24d4204SJose E. Roman /* auxiliary 1d BLACS contexts for 1xsize and sizex1 grids */ 1780*f7ec113fSDamian Marek grid->ictxrow = Csys2blacs_handle(icomm); 1781d24d4204SJose E. Roman Cblacs_gridinit(&grid->ictxrow,"R",1,size); 1782*f7ec113fSDamian Marek grid->ictxcol = Csys2blacs_handle(icomm); 1783d24d4204SJose E. Roman Cblacs_gridinit(&grid->ictxcol,"R",size,1); 1784d24d4204SJose E. Roman ierr = MPI_Comm_set_attr(icomm,Petsc_ScaLAPACK_keyval,(void*)grid);CHKERRQ(ierr); 1785d24d4204SJose E. Roman 1786d24d4204SJose E. Roman } else grid->grid_refct++; 1787d24d4204SJose E. Roman ierr = PetscCommDestroy(&icomm);CHKERRQ(ierr); 1788d24d4204SJose E. Roman a->grid = grid; 1789d24d4204SJose E. Roman a->mb = DEFAULT_BLOCKSIZE; 1790d24d4204SJose E. Roman a->nb = DEFAULT_BLOCKSIZE; 1791d24d4204SJose E. Roman 1792d24d4204SJose E. Roman ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),NULL,"ScaLAPACK Options","Mat");CHKERRQ(ierr); 1793d24d4204SJose E. Roman ierr = PetscOptionsIntArray("-mat_scalapack_block_sizes","Size of the blocks to use (one or two comma-separated integers)","MatCreateScaLAPACK",array,&k,&flg);CHKERRQ(ierr); 1794d24d4204SJose E. Roman if (flg) { 1795d24d4204SJose E. Roman a->mb = array[0]; 1796d24d4204SJose E. Roman a->nb = (k>1)? array[1]: a->mb; 1797d24d4204SJose E. Roman } 1798d24d4204SJose E. Roman ierr = PetscOptionsEnd();CHKERRQ(ierr); 1799d24d4204SJose E. Roman 1800d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)A,"MatGetOwnershipIS_C",MatGetOwnershipIS_ScaLAPACK);CHKERRQ(ierr); 1801d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)A,"MatScaLAPACKSetBlockSizes_C",MatScaLAPACKSetBlockSizes_ScaLAPACK);CHKERRQ(ierr); 1802d24d4204SJose E. Roman ierr = PetscObjectComposeFunction((PetscObject)A,"MatScaLAPACKGetBlockSizes_C",MatScaLAPACKGetBlockSizes_ScaLAPACK);CHKERRQ(ierr); 1803d24d4204SJose E. Roman ierr = PetscObjectChangeTypeName((PetscObject)A,MATSCALAPACK);CHKERRQ(ierr); 1804d24d4204SJose E. Roman PetscFunctionReturn(0); 1805d24d4204SJose E. Roman } 1806d24d4204SJose E. Roman 1807d24d4204SJose E. Roman /*@C 1808d24d4204SJose E. Roman MatCreateScaLAPACK - Creates a dense parallel matrix in ScaLAPACK format 1809d24d4204SJose E. Roman (2D block cyclic distribution). 1810d24d4204SJose E. Roman 1811d24d4204SJose E. Roman Collective 1812d24d4204SJose E. Roman 1813d24d4204SJose E. Roman Input Parameters: 1814d24d4204SJose E. Roman + comm - MPI communicator 1815d24d4204SJose E. Roman . mb - row block size (or PETSC_DECIDE to have it set) 1816d24d4204SJose E. Roman . nb - column block size (or PETSC_DECIDE to have it set) 1817d24d4204SJose E. Roman . M - number of global rows 1818d24d4204SJose E. Roman . N - number of global columns 1819d24d4204SJose E. Roman . rsrc - coordinate of process that owns the first row of the distributed matrix 1820d24d4204SJose E. Roman - csrc - coordinate of process that owns the first column of the distributed matrix 1821d24d4204SJose E. Roman 1822d24d4204SJose E. Roman Output Parameter: 1823d24d4204SJose E. Roman . A - the matrix 1824d24d4204SJose E. Roman 1825d24d4204SJose E. Roman Options Database Keys: 1826d24d4204SJose E. Roman . -mat_scalapack_block_sizes - size of the blocks to use (one or two integers separated by comma) 1827d24d4204SJose E. Roman 1828d24d4204SJose E. Roman It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 1829d24d4204SJose E. Roman MatXXXXSetPreallocation() paradigm instead of this routine directly. 1830d24d4204SJose E. Roman [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 1831d24d4204SJose E. Roman 1832d24d4204SJose E. Roman Notes: 1833d24d4204SJose E. Roman If PETSC_DECIDE is used for the block sizes, then an appropriate value 1834d24d4204SJose E. Roman is chosen. 1835d24d4204SJose E. Roman 1836d24d4204SJose E. Roman Storage Information: 1837d24d4204SJose E. Roman Storate is completely managed by ScaLAPACK, so this requires PETSc to be 1838d24d4204SJose E. Roman configured with ScaLAPACK. In particular, PETSc's local sizes lose 1839d24d4204SJose E. Roman significance and are thus ignored. The block sizes refer to the values 1840d24d4204SJose E. Roman used for the distributed matrix, not the same meaning as in BAIJ. 1841d24d4204SJose E. Roman 1842d24d4204SJose E. Roman Level: intermediate 1843d24d4204SJose E. Roman 1844d24d4204SJose E. Roman .seealso: MatCreate(), MatCreateDense(), MatSetValues() 1845d24d4204SJose E. Roman @*/ 1846d24d4204SJose E. Roman PetscErrorCode MatCreateScaLAPACK(MPI_Comm comm,PetscInt mb,PetscInt nb,PetscInt M,PetscInt N,PetscInt rsrc,PetscInt csrc,Mat *A) 1847d24d4204SJose E. Roman { 1848d24d4204SJose E. Roman PetscErrorCode ierr; 1849d24d4204SJose E. Roman Mat_ScaLAPACK *a; 1850d24d4204SJose E. Roman PetscInt m,n; 1851d24d4204SJose E. Roman 1852d24d4204SJose E. Roman PetscFunctionBegin; 1853d24d4204SJose E. Roman ierr = MatCreate(comm,A);CHKERRQ(ierr); 1854d24d4204SJose E. Roman ierr = MatSetType(*A,MATSCALAPACK);CHKERRQ(ierr); 1855d24d4204SJose E. Roman if (M==PETSC_DECIDE || N==PETSC_DECIDE) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot use PETSC_DECIDE for matrix dimensions"); 1856d24d4204SJose E. Roman /* rows and columns are NOT distributed according to PetscSplitOwnership */ 1857d24d4204SJose E. Roman m = PETSC_DECIDE; 1858d24d4204SJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&m,&M);CHKERRQ(ierr); 1859d24d4204SJose E. Roman n = PETSC_DECIDE; 1860d24d4204SJose E. Roman ierr = PetscSplitOwnershipEqual(comm,&n,&N);CHKERRQ(ierr); 1861d24d4204SJose E. Roman ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr); 1862d24d4204SJose E. Roman a = (Mat_ScaLAPACK*)(*A)->data; 1863d24d4204SJose E. Roman ierr = PetscBLASIntCast(M,&a->M);CHKERRQ(ierr); 1864d24d4204SJose E. Roman ierr = PetscBLASIntCast(N,&a->N);CHKERRQ(ierr); 1865d24d4204SJose E. Roman ierr = PetscBLASIntCast((mb==PETSC_DECIDE)?DEFAULT_BLOCKSIZE:mb,&a->mb);CHKERRQ(ierr); 1866d24d4204SJose E. Roman ierr = PetscBLASIntCast((nb==PETSC_DECIDE)?a->mb:nb,&a->nb);CHKERRQ(ierr); 1867d24d4204SJose E. Roman ierr = PetscBLASIntCast(rsrc,&a->rsrc);CHKERRQ(ierr); 1868d24d4204SJose E. Roman ierr = PetscBLASIntCast(csrc,&a->csrc);CHKERRQ(ierr); 1869d24d4204SJose E. Roman ierr = MatSetUp(*A);CHKERRQ(ierr); 1870d24d4204SJose E. Roman PetscFunctionReturn(0); 1871d24d4204SJose E. Roman } 1872d24d4204SJose E. Roman 1873