xref: /petsc/src/mat/impls/sell/seq/sell.c (revision 2d1451d43b73a0495cd81c074cbc1e0206888947)
1d4002b98SHong Zhang 
2d4002b98SHong Zhang /*
3d4002b98SHong Zhang   Defines the basic matrix operations for the SELL matrix storage format.
4d4002b98SHong Zhang */
5d4002b98SHong Zhang #include <../src/mat/impls/sell/seq/sell.h> /*I   "petscmat.h"  I*/
6d4002b98SHong Zhang #include <petscblaslapack.h>
7d4002b98SHong Zhang #include <petsc/private/kernels/blocktranspose.h>
8ed73aabaSBarry Smith 
9ed73aabaSBarry Smith static PetscBool  cited      = PETSC_FALSE;
109371c9d4SSatish Balay static const char citation[] = "@inproceedings{ZhangELLPACK2018,\n"
11ed73aabaSBarry Smith                                " author = {Hong Zhang and Richard T. Mills and Karl Rupp and Barry F. Smith},\n"
12ed73aabaSBarry Smith                                " title = {Vectorized Parallel Sparse Matrix-Vector Multiplication in {PETSc} Using {AVX-512}},\n"
13ed73aabaSBarry Smith                                " booktitle = {Proceedings of the 47th International Conference on Parallel Processing},\n"
14ed73aabaSBarry Smith                                " year = 2018\n"
15ed73aabaSBarry Smith                                "}\n";
16ed73aabaSBarry Smith 
175f70456aSHong Zhang #if defined(PETSC_HAVE_IMMINTRIN_H) && (defined(__AVX512F__) || (defined(__AVX2__) && defined(__FMA__)) || defined(__AVX__)) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
184243e2ceSHong Zhang 
19d4002b98SHong Zhang   #include <immintrin.h>
20d4002b98SHong Zhang 
21d4002b98SHong Zhang   #if !defined(_MM_SCALE_8)
22d4002b98SHong Zhang     #define _MM_SCALE_8 8
23d4002b98SHong Zhang   #endif
24d4002b98SHong Zhang 
25d4002b98SHong Zhang   #if defined(__AVX512F__)
26d4002b98SHong Zhang     /* these do not work
27d4002b98SHong Zhang    vec_idx  = _mm512_loadunpackhi_epi32(vec_idx,acolidx);
28d4002b98SHong Zhang    vec_vals = _mm512_loadunpackhi_pd(vec_vals,aval);
29d4002b98SHong Zhang   */
30d4002b98SHong Zhang     #define AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y) \
31d4002b98SHong Zhang       /* if the mask bit is set, copy from acolidx, otherwise from vec_idx */ \
32ef588d5cSRichard Tran Mills       vec_idx  = _mm256_loadu_si256((__m256i const *)acolidx); \
33ef588d5cSRichard Tran Mills       vec_vals = _mm512_loadu_pd(aval); \
34d4002b98SHong Zhang       vec_x    = _mm512_i32gather_pd(vec_idx, x, _MM_SCALE_8); \
35a48a6482SHong Zhang       vec_y    = _mm512_fmadd_pd(vec_x, vec_vals, vec_y)
365f70456aSHong Zhang   #elif defined(__AVX2__) && defined(__FMA__)
37a48a6482SHong Zhang     #define AVX2_Mult_Private(vec_idx, vec_x, vec_vals, vec_y) \
38ef588d5cSRichard Tran Mills       vec_vals = _mm256_loadu_pd(aval); \
39ef588d5cSRichard Tran Mills       vec_idx  = _mm_loadu_si128((__m128i const *)acolidx); /* SSE2 */ \
40a48a6482SHong Zhang       vec_x    = _mm256_i32gather_pd(x, vec_idx, _MM_SCALE_8); \
41a48a6482SHong Zhang       vec_y    = _mm256_fmadd_pd(vec_x, vec_vals, vec_y)
42d4002b98SHong Zhang   #endif
43d4002b98SHong Zhang #endif /* PETSC_HAVE_IMMINTRIN_H */
44d4002b98SHong Zhang 
45d4002b98SHong Zhang /*@C
46d4002b98SHong Zhang  MatSeqSELLSetPreallocation - For good matrix assembly performance
4720f4b53cSBarry Smith  the user should preallocate the matrix storage by setting the parameter `nz`
4820f4b53cSBarry Smith  (or the array `nnz`).
49d4002b98SHong Zhang 
50d083f849SBarry Smith  Collective
51d4002b98SHong Zhang 
52d4002b98SHong Zhang  Input Parameters:
5311a5261eSBarry Smith +  B - The `MATSEQSELL` matrix
5420f4b53cSBarry Smith .  rlenmax - number of nonzeros per row (same for all rows), ignored if `rlen` is provided
5520f4b53cSBarry Smith -  rlen - array containing the number of nonzeros in the various rows (possibly different for each row) or `NULL`
5667be906fSBarry Smith 
5767be906fSBarry Smith  Level: intermediate
58d4002b98SHong Zhang 
59d4002b98SHong Zhang  Notes:
6067be906fSBarry Smith  Specify the preallocated storage with either `rlenmax` or `rlen` (not both).
6167be906fSBarry Smith  Set `rlenmax` = `PETSC_DEFAULT` and `rlen` = `NULL` for PETSc to control dynamic memory
6220f4b53cSBarry Smith  allocation.
63d4002b98SHong Zhang 
6411a5261eSBarry Smith  You can call `MatGetInfo()` to get information on how effective the preallocation was;
65d4002b98SHong Zhang  for example the fields mallocs,nz_allocated,nz_used,nz_unneeded;
6667be906fSBarry Smith  You can also run with the option `-info` and look for messages with the string
67d4002b98SHong Zhang  malloc in them to see if additional memory allocation was needed.
68d4002b98SHong Zhang 
6927430b45SBarry Smith  Developer Note:
7067be906fSBarry Smith  Use `rlenmax` of `MAT_SKIP_ALLOCATION` to not allocate any space for the matrix
71d4002b98SHong Zhang  entries or columns indices.
72d4002b98SHong Zhang 
73c7ee91abSRichard Tran Mills  The maximum number of nonzeos in any row should be as accurate as possible.
74c7ee91abSRichard Tran Mills  If it is underestimated, you will get bad performance due to reallocation
7567be906fSBarry Smith  (`MatSeqXSELLReallocateSELL()`).
76d4002b98SHong Zhang 
7767be906fSBarry Smith  .seealso: `Mat`, `MATSEQSELL`, `MATSELL`, `MatCreate()`, `MatCreateSELL()`, `MatSetValues()`, `MatGetInfo()`
78d4002b98SHong Zhang  @*/
79d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqSELLSetPreallocation(Mat B, PetscInt rlenmax, const PetscInt rlen[])
80d71ae5a4SJacob Faibussowitsch {
81d4002b98SHong Zhang   PetscFunctionBegin;
82d4002b98SHong Zhang   PetscValidHeaderSpecific(B, MAT_CLASSID, 1);
83d4002b98SHong Zhang   PetscValidType(B, 1);
84cac4c232SBarry Smith   PetscTryMethod(B, "MatSeqSELLSetPreallocation_C", (Mat, PetscInt, const PetscInt[]), (B, rlenmax, rlen));
853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
86d4002b98SHong Zhang }
87d4002b98SHong Zhang 
88d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqSELLSetPreallocation_SeqSELL(Mat B, PetscInt maxallocrow, const PetscInt rlen[])
89d71ae5a4SJacob Faibussowitsch {
90d4002b98SHong Zhang   Mat_SeqSELL *b;
91d4002b98SHong Zhang   PetscInt     i, j, totalslices;
92d4002b98SHong Zhang   PetscBool    skipallocation = PETSC_FALSE, realalloc = PETSC_FALSE;
93d4002b98SHong Zhang 
94d4002b98SHong Zhang   PetscFunctionBegin;
95d4002b98SHong Zhang   if (maxallocrow >= 0 || rlen) realalloc = PETSC_TRUE;
96d4002b98SHong Zhang   if (maxallocrow == MAT_SKIP_ALLOCATION) {
97d4002b98SHong Zhang     skipallocation = PETSC_TRUE;
98d4002b98SHong Zhang     maxallocrow    = 0;
99d4002b98SHong Zhang   }
100d4002b98SHong Zhang 
1019566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(B->rmap));
1029566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(B->cmap));
103d4002b98SHong Zhang 
104d4002b98SHong Zhang   /* FIXME: if one preallocates more space than needed, the matrix does not shrink automatically, but for best performance it should */
105d4002b98SHong Zhang   if (maxallocrow == PETSC_DEFAULT || maxallocrow == PETSC_DECIDE) maxallocrow = 5;
10608401ef6SPierre Jolivet   PetscCheck(maxallocrow >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "maxallocrow cannot be less than 0: value %" PetscInt_FMT, maxallocrow);
107d4002b98SHong Zhang   if (rlen) {
108d4002b98SHong Zhang     for (i = 0; i < B->rmap->n; i++) {
10908401ef6SPierre Jolivet       PetscCheck(rlen[i] >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "rlen cannot be less than 0: local row %" PetscInt_FMT " value %" PetscInt_FMT, i, rlen[i]);
11008401ef6SPierre Jolivet       PetscCheck(rlen[i] <= B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "rlen cannot be greater than row length: local row %" PetscInt_FMT " value %" PetscInt_FMT " rowlength %" PetscInt_FMT, i, rlen[i], B->cmap->n);
111d4002b98SHong Zhang     }
112d4002b98SHong Zhang   }
113d4002b98SHong Zhang 
114d4002b98SHong Zhang   B->preallocated = PETSC_TRUE;
115d4002b98SHong Zhang 
116d4002b98SHong Zhang   b = (Mat_SeqSELL *)B->data;
117d4002b98SHong Zhang 
118*2d1451d4SHong Zhang   totalslices    = PetscCeilInt(B->rmap->n, SLICE_HEIGHT);
119d4002b98SHong Zhang   b->totalslices = totalslices;
120d4002b98SHong Zhang   if (!skipallocation) {
121*2d1451d4SHong Zhang     if (B->rmap->n % SLICE_HEIGHT) PetscCall(PetscInfo(B, "Padding rows to the SEQSELL matrix because the number of rows is not the multiple of the slice height (value %" PetscInt_FMT ")\n", B->rmap->n));
122d4002b98SHong Zhang 
123d4002b98SHong Zhang     if (!b->sliidx) { /* sliidx gives the starting index of each slice, the last element is the total space allocated */
1249566063dSJacob Faibussowitsch       PetscCall(PetscMalloc1(totalslices + 1, &b->sliidx));
125d4002b98SHong Zhang     }
126d4002b98SHong Zhang     if (!rlen) { /* if rlen is not provided, allocate same space for all the slices */
127d4002b98SHong Zhang       if (maxallocrow == PETSC_DEFAULT || maxallocrow == PETSC_DECIDE) maxallocrow = 10;
128d4002b98SHong Zhang       else if (maxallocrow < 0) maxallocrow = 1;
129*2d1451d4SHong Zhang       for (i = 0; i <= totalslices; i++) b->sliidx[i] = SLICE_HEIGHT * i * maxallocrow;
130d4002b98SHong Zhang     } else {
131d4002b98SHong Zhang       maxallocrow  = 0;
132d4002b98SHong Zhang       b->sliidx[0] = 0;
133d4002b98SHong Zhang       for (i = 1; i < totalslices; i++) {
134d4002b98SHong Zhang         b->sliidx[i] = 0;
135*2d1451d4SHong Zhang         for (j = 0; j < SLICE_HEIGHT; j++) { b->sliidx[i] = PetscMax(b->sliidx[i], rlen[SLICE_HEIGHT * (i - 1) + j]); }
136d4002b98SHong Zhang         maxallocrow = PetscMax(b->sliidx[i], maxallocrow);
137*2d1451d4SHong Zhang         PetscCall(PetscIntSumError(b->sliidx[i - 1], SLICE_HEIGHT * b->sliidx[i], &b->sliidx[i]));
138d4002b98SHong Zhang       }
139d4002b98SHong Zhang       /* last slice */
140d4002b98SHong Zhang       b->sliidx[totalslices] = 0;
141*2d1451d4SHong Zhang       for (j = SLICE_HEIGHT * (totalslices - 1); j < B->rmap->n; j++) b->sliidx[totalslices] = PetscMax(b->sliidx[totalslices], rlen[j]);
142d4002b98SHong Zhang       maxallocrow            = PetscMax(b->sliidx[totalslices], maxallocrow);
143*2d1451d4SHong Zhang       b->sliidx[totalslices] = b->sliidx[totalslices - 1] + SLICE_HEIGHT * b->sliidx[totalslices];
144d4002b98SHong Zhang     }
145d4002b98SHong Zhang 
146d4002b98SHong Zhang     /* allocate space for val, colidx, rlen */
147d4002b98SHong Zhang     /* FIXME: should B's old memory be unlogged? */
1489566063dSJacob Faibussowitsch     PetscCall(MatSeqXSELLFreeSELL(B, &b->val, &b->colidx));
149d4002b98SHong Zhang     /* FIXME: assuming an element of the bit array takes 8 bits */
1509566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(b->sliidx[totalslices], &b->val, b->sliidx[totalslices], &b->colidx));
151d4002b98SHong Zhang     /* b->rlen will count nonzeros in each row so far. We dont copy rlen to b->rlen because the matrix has not been set. */
152*2d1451d4SHong Zhang     PetscCall(PetscCalloc1(SLICE_HEIGHT * totalslices, &b->rlen));
153d4002b98SHong Zhang 
154d4002b98SHong Zhang     b->singlemalloc = PETSC_TRUE;
155d4002b98SHong Zhang     b->free_val     = PETSC_TRUE;
156d4002b98SHong Zhang     b->free_colidx  = PETSC_TRUE;
157d4002b98SHong Zhang   } else {
158d4002b98SHong Zhang     b->free_val    = PETSC_FALSE;
159d4002b98SHong Zhang     b->free_colidx = PETSC_FALSE;
160d4002b98SHong Zhang   }
161d4002b98SHong Zhang 
162d4002b98SHong Zhang   b->nz               = 0;
163d4002b98SHong Zhang   b->maxallocrow      = maxallocrow;
164d4002b98SHong Zhang   b->rlenmax          = maxallocrow;
165d4002b98SHong Zhang   b->maxallocmat      = b->sliidx[totalslices];
166d4002b98SHong Zhang   B->info.nz_unneeded = (double)b->maxallocmat;
1671baa6e33SBarry Smith   if (realalloc) PetscCall(MatSetOption(B, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_TRUE));
1683ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
169d4002b98SHong Zhang }
170d4002b98SHong Zhang 
171d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetRow_SeqSELL(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v)
172d71ae5a4SJacob Faibussowitsch {
1736108893eSStefano Zampini   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1746108893eSStefano Zampini   PetscInt     shift;
1756108893eSStefano Zampini 
1766108893eSStefano Zampini   PetscFunctionBegin;
177aed4548fSBarry Smith   PetscCheck(row >= 0 && row < A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row %" PetscInt_FMT " out of range", row);
1786108893eSStefano Zampini   if (nz) *nz = a->rlen[row];
179*2d1451d4SHong Zhang   shift = a->sliidx[row / SLICE_HEIGHT] + (row % SLICE_HEIGHT);
180*2d1451d4SHong Zhang   if (!a->getrowcols) { PetscCall(PetscMalloc2(a->rlenmax, &a->getrowcols, a->rlenmax, &a->getrowvals)); }
1816108893eSStefano Zampini   if (idx) {
1826108893eSStefano Zampini     PetscInt j;
183*2d1451d4SHong Zhang     for (j = 0; j < a->rlen[row]; j++) a->getrowcols[j] = a->colidx[shift + SLICE_HEIGHT * j];
1846108893eSStefano Zampini     *idx = a->getrowcols;
1856108893eSStefano Zampini   }
1866108893eSStefano Zampini   if (v) {
1876108893eSStefano Zampini     PetscInt j;
188*2d1451d4SHong Zhang     for (j = 0; j < a->rlen[row]; j++) a->getrowvals[j] = a->val[shift + SLICE_HEIGHT * j];
1896108893eSStefano Zampini     *v = a->getrowvals;
1906108893eSStefano Zampini   }
1913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1926108893eSStefano Zampini }
1936108893eSStefano Zampini 
194d71ae5a4SJacob Faibussowitsch PetscErrorCode MatRestoreRow_SeqSELL(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v)
195d71ae5a4SJacob Faibussowitsch {
1966108893eSStefano Zampini   PetscFunctionBegin;
1973ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1986108893eSStefano Zampini }
1996108893eSStefano Zampini 
200d71ae5a4SJacob Faibussowitsch PetscErrorCode MatConvert_SeqSELL_SeqAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat)
201d71ae5a4SJacob Faibussowitsch {
202d4002b98SHong Zhang   Mat          B;
203d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
204e3f1f374SStefano Zampini   PetscInt     i;
205d4002b98SHong Zhang 
206d4002b98SHong Zhang   PetscFunctionBegin;
207ad013a7bSRichard Tran Mills   if (reuse == MAT_REUSE_MATRIX) {
208ad013a7bSRichard Tran Mills     B = *newmat;
2099566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries(B));
210ad013a7bSRichard Tran Mills   } else {
2119566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
2129566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N));
2139566063dSJacob Faibussowitsch     PetscCall(MatSetType(B, MATSEQAIJ));
2149566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJSetPreallocation(B, 0, a->rlen));
215ad013a7bSRichard Tran Mills   }
216d4002b98SHong Zhang 
217e3f1f374SStefano Zampini   for (i = 0; i < A->rmap->n; i++) {
218e108cb99SStefano Zampini     PetscInt     nz = 0, *cols = NULL;
219e108cb99SStefano Zampini     PetscScalar *vals = NULL;
220e3f1f374SStefano Zampini 
2219566063dSJacob Faibussowitsch     PetscCall(MatGetRow_SeqSELL(A, i, &nz, &cols, &vals));
2229566063dSJacob Faibussowitsch     PetscCall(MatSetValues(B, 1, &i, nz, cols, vals, INSERT_VALUES));
2239566063dSJacob Faibussowitsch     PetscCall(MatRestoreRow_SeqSELL(A, i, &nz, &cols, &vals));
224d4002b98SHong Zhang   }
225e3f1f374SStefano Zampini 
2269566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY));
2279566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY));
228d4002b98SHong Zhang   B->rmap->bs = A->rmap->bs;
229d4002b98SHong Zhang 
230d4002b98SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
2319566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A, &B));
232d4002b98SHong Zhang   } else {
233d4002b98SHong Zhang     *newmat = B;
234d4002b98SHong Zhang   }
2353ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
236d4002b98SHong Zhang }
237d4002b98SHong Zhang 
238d4002b98SHong Zhang #include <../src/mat/impls/aij/seq/aij.h>
239d4002b98SHong Zhang 
240d71ae5a4SJacob Faibussowitsch PetscErrorCode MatConvert_SeqAIJ_SeqSELL(Mat A, MatType newtype, MatReuse reuse, Mat *newmat)
241d71ae5a4SJacob Faibussowitsch {
242d4002b98SHong Zhang   Mat                B;
243d4002b98SHong Zhang   Mat_SeqAIJ        *a  = (Mat_SeqAIJ *)A->data;
244d4002b98SHong Zhang   PetscInt          *ai = a->i, m = A->rmap->N, n = A->cmap->N, i, *rowlengths, row, ncols;
245d4002b98SHong Zhang   const PetscInt    *cols;
246d4002b98SHong Zhang   const PetscScalar *vals;
247d4002b98SHong Zhang 
248d4002b98SHong Zhang   PetscFunctionBegin;
249ad013a7bSRichard Tran Mills 
250ad013a7bSRichard Tran Mills   if (reuse == MAT_REUSE_MATRIX) {
251ad013a7bSRichard Tran Mills     B = *newmat;
252ad013a7bSRichard Tran Mills   } else {
253d5e5b2e5SBarry Smith     if (PetscDefined(USE_DEBUG) || !a->ilen) {
2549566063dSJacob Faibussowitsch       PetscCall(PetscMalloc1(m, &rowlengths));
255ad540459SPierre Jolivet       for (i = 0; i < m; i++) rowlengths[i] = ai[i + 1] - ai[i];
256d5e5b2e5SBarry Smith     }
257d5e5b2e5SBarry Smith     if (PetscDefined(USE_DEBUG) && a->ilen) {
258d5e5b2e5SBarry Smith       PetscBool eq;
2599566063dSJacob Faibussowitsch       PetscCall(PetscMemcmp(rowlengths, a->ilen, m * sizeof(PetscInt), &eq));
26028b400f6SJacob Faibussowitsch       PetscCheck(eq, PETSC_COMM_SELF, PETSC_ERR_PLIB, "SeqAIJ ilen array incorrect");
2619566063dSJacob Faibussowitsch       PetscCall(PetscFree(rowlengths));
262d5e5b2e5SBarry Smith       rowlengths = a->ilen;
263d5e5b2e5SBarry Smith     } else if (a->ilen) rowlengths = a->ilen;
2649566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
2659566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B, m, n, m, n));
2669566063dSJacob Faibussowitsch     PetscCall(MatSetType(B, MATSEQSELL));
2679566063dSJacob Faibussowitsch     PetscCall(MatSeqSELLSetPreallocation(B, 0, rowlengths));
2689566063dSJacob Faibussowitsch     if (rowlengths != a->ilen) PetscCall(PetscFree(rowlengths));
269ad013a7bSRichard Tran Mills   }
270d4002b98SHong Zhang 
271d4002b98SHong Zhang   for (row = 0; row < m; row++) {
2729566063dSJacob Faibussowitsch     PetscCall(MatGetRow_SeqAIJ(A, row, &ncols, (PetscInt **)&cols, (PetscScalar **)&vals));
2739566063dSJacob Faibussowitsch     PetscCall(MatSetValues_SeqSELL(B, 1, &row, ncols, cols, vals, INSERT_VALUES));
2749566063dSJacob Faibussowitsch     PetscCall(MatRestoreRow_SeqAIJ(A, row, &ncols, (PetscInt **)&cols, (PetscScalar **)&vals));
275d4002b98SHong Zhang   }
2769566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY));
2779566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY));
278d4002b98SHong Zhang   B->rmap->bs = A->rmap->bs;
279d4002b98SHong Zhang 
280d4002b98SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
2819566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A, &B));
282d4002b98SHong Zhang   } else {
283d4002b98SHong Zhang     *newmat = B;
284d4002b98SHong Zhang   }
2853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
286d4002b98SHong Zhang }
287d4002b98SHong Zhang 
288d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMult_SeqSELL(Mat A, Vec xx, Vec yy)
289d71ae5a4SJacob Faibussowitsch {
290d4002b98SHong Zhang   Mat_SeqSELL       *a = (Mat_SeqSELL *)A->data;
291d4002b98SHong Zhang   PetscScalar       *y;
292d4002b98SHong Zhang   const PetscScalar *x;
293d4002b98SHong Zhang   const MatScalar   *aval        = a->val;
294d4002b98SHong Zhang   PetscInt           totalslices = a->totalslices;
295d4002b98SHong Zhang   const PetscInt    *acolidx     = a->colidx;
2967285fed1SHong Zhang   PetscInt           i, j;
297d4002b98SHong Zhang #if defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX512F__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
298d4002b98SHong Zhang   __m512d  vec_x, vec_y, vec_vals;
299d4002b98SHong Zhang   __m256i  vec_idx;
300d4002b98SHong Zhang   __mmask8 mask;
301d4002b98SHong Zhang   __m512d  vec_x2, vec_y2, vec_vals2, vec_x3, vec_y3, vec_vals3, vec_x4, vec_y4, vec_vals4;
302d4002b98SHong Zhang   __m256i  vec_idx2, vec_idx3, vec_idx4;
3035f70456aSHong Zhang #elif defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX2__) && defined(__FMA__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
304a48a6482SHong Zhang   __m128i   vec_idx;
305a48a6482SHong Zhang   __m256d   vec_x, vec_y, vec_y2, vec_vals;
306a48a6482SHong Zhang   MatScalar yval;
307a48a6482SHong Zhang   PetscInt  r, rows_left, row, nnz_in_row;
30821cec45eSHong Zhang #elif defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
309d4002b98SHong Zhang   __m128d   vec_x_tmp;
310d4002b98SHong Zhang   __m256d   vec_x, vec_y, vec_y2, vec_vals;
311d4002b98SHong Zhang   MatScalar yval;
312d4002b98SHong Zhang   PetscInt  r, rows_left, row, nnz_in_row;
313d4002b98SHong Zhang #else
314*2d1451d4SHong Zhang   PetscInt    k;
315*2d1451d4SHong Zhang   PetscScalar sum[SLICE_HEIGHT];
316d4002b98SHong Zhang #endif
317d4002b98SHong Zhang 
318d4002b98SHong Zhang #if defined(PETSC_HAVE_PRAGMA_DISJOINT)
319d4002b98SHong Zhang   #pragma disjoint(*x, *y, *aval)
320d4002b98SHong Zhang #endif
321d4002b98SHong Zhang 
322d4002b98SHong Zhang   PetscFunctionBegin;
3239566063dSJacob Faibussowitsch   PetscCall(VecGetArrayRead(xx, &x));
3249566063dSJacob Faibussowitsch   PetscCall(VecGetArray(yy, &y));
325d4002b98SHong Zhang #if defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX512F__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
326d4002b98SHong Zhang   for (i = 0; i < totalslices; i++) { /* loop over slices */
327d4002b98SHong Zhang     PetscPrefetchBlock(acolidx, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
328d4002b98SHong Zhang     PetscPrefetchBlock(aval, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
329d4002b98SHong Zhang 
330d4002b98SHong Zhang     vec_y  = _mm512_setzero_pd();
331d4002b98SHong Zhang     vec_y2 = _mm512_setzero_pd();
332d4002b98SHong Zhang     vec_y3 = _mm512_setzero_pd();
333d4002b98SHong Zhang     vec_y4 = _mm512_setzero_pd();
334d4002b98SHong Zhang 
335da81f932SPierre Jolivet     j = a->sliidx[i] >> 3; /* 8 bytes are read at each time, corresponding to a slice column */
336d4002b98SHong Zhang     switch ((a->sliidx[i + 1] - a->sliidx[i]) / 8 & 3) {
337d4002b98SHong Zhang     case 3:
338d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
3399371c9d4SSatish Balay       acolidx += 8;
3409371c9d4SSatish Balay       aval += 8;
341d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx2, vec_x2, vec_vals2, vec_y2);
3429371c9d4SSatish Balay       acolidx += 8;
3439371c9d4SSatish Balay       aval += 8;
344d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx3, vec_x3, vec_vals3, vec_y3);
3459371c9d4SSatish Balay       acolidx += 8;
3469371c9d4SSatish Balay       aval += 8;
347d4002b98SHong Zhang       j += 3;
348d4002b98SHong Zhang       break;
349d4002b98SHong Zhang     case 2:
350d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
3519371c9d4SSatish Balay       acolidx += 8;
3529371c9d4SSatish Balay       aval += 8;
353d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx2, vec_x2, vec_vals2, vec_y2);
3549371c9d4SSatish Balay       acolidx += 8;
3559371c9d4SSatish Balay       aval += 8;
356d4002b98SHong Zhang       j += 2;
357d4002b98SHong Zhang       break;
358d4002b98SHong Zhang     case 1:
359d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
3609371c9d4SSatish Balay       acolidx += 8;
3619371c9d4SSatish Balay       aval += 8;
362d4002b98SHong Zhang       j += 1;
363d4002b98SHong Zhang       break;
364d4002b98SHong Zhang     }
365d4002b98SHong Zhang   #pragma novector
366d4002b98SHong Zhang     for (; j < (a->sliidx[i + 1] >> 3); j += 4) {
367d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
3689371c9d4SSatish Balay       acolidx += 8;
3699371c9d4SSatish Balay       aval += 8;
370d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx2, vec_x2, vec_vals2, vec_y2);
3719371c9d4SSatish Balay       acolidx += 8;
3729371c9d4SSatish Balay       aval += 8;
373d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx3, vec_x3, vec_vals3, vec_y3);
3749371c9d4SSatish Balay       acolidx += 8;
3759371c9d4SSatish Balay       aval += 8;
376d4002b98SHong Zhang       AVX512_Mult_Private(vec_idx4, vec_x4, vec_vals4, vec_y4);
3779371c9d4SSatish Balay       acolidx += 8;
3789371c9d4SSatish Balay       aval += 8;
379d4002b98SHong Zhang     }
380d4002b98SHong Zhang 
381d4002b98SHong Zhang     vec_y = _mm512_add_pd(vec_y, vec_y2);
382d4002b98SHong Zhang     vec_y = _mm512_add_pd(vec_y, vec_y3);
383d4002b98SHong Zhang     vec_y = _mm512_add_pd(vec_y, vec_y4);
384d4002b98SHong Zhang     if (i == totalslices - 1 && A->rmap->n & 0x07) { /* if last slice has padding rows */
385d4002b98SHong Zhang       mask = (__mmask8)(0xff >> (8 - (A->rmap->n & 0x07)));
386ef588d5cSRichard Tran Mills       _mm512_mask_storeu_pd(&y[8 * i], mask, vec_y);
387d4002b98SHong Zhang     } else {
388ef588d5cSRichard Tran Mills       _mm512_storeu_pd(&y[8 * i], vec_y);
389d4002b98SHong Zhang     }
390d4002b98SHong Zhang   }
3915f70456aSHong Zhang #elif defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX2__) && defined(__FMA__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
392a48a6482SHong Zhang   for (i = 0; i < totalslices; i++) { /* loop over full slices */
393a48a6482SHong Zhang     PetscPrefetchBlock(acolidx, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
394a48a6482SHong Zhang     PetscPrefetchBlock(aval, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
395a48a6482SHong Zhang 
396a48a6482SHong Zhang     /* last slice may have padding rows. Don't use vectorization. */
397a48a6482SHong Zhang     if (i == totalslices - 1 && (A->rmap->n & 0x07)) {
398a48a6482SHong Zhang       rows_left = A->rmap->n - 8 * i;
399a48a6482SHong Zhang       for (r = 0; r < rows_left; ++r) {
400a48a6482SHong Zhang         yval       = (MatScalar)0;
401a48a6482SHong Zhang         row        = 8 * i + r;
402a48a6482SHong Zhang         nnz_in_row = a->rlen[row];
403a48a6482SHong Zhang         for (j = 0; j < nnz_in_row; ++j) yval += aval[8 * j + r] * x[acolidx[8 * j + r]];
404a48a6482SHong Zhang         y[row] = yval;
405a48a6482SHong Zhang       }
406a48a6482SHong Zhang       break;
407a48a6482SHong Zhang     }
408a48a6482SHong Zhang 
409a48a6482SHong Zhang     vec_y  = _mm256_setzero_pd();
410a48a6482SHong Zhang     vec_y2 = _mm256_setzero_pd();
411a48a6482SHong Zhang 
412a48a6482SHong Zhang   /* Process slice of height 8 (512 bits) via two subslices of height 4 (256 bits) via AVX */
413a48a6482SHong Zhang   #pragma novector
414a48a6482SHong Zhang   #pragma unroll(2)
415a48a6482SHong Zhang     for (j = a->sliidx[i]; j < a->sliidx[i + 1]; j += 8) {
416a48a6482SHong Zhang       AVX2_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
4179371c9d4SSatish Balay       aval += 4;
4189371c9d4SSatish Balay       acolidx += 4;
419a48a6482SHong Zhang       AVX2_Mult_Private(vec_idx, vec_x, vec_vals, vec_y2);
4209371c9d4SSatish Balay       aval += 4;
4219371c9d4SSatish Balay       acolidx += 4;
422a48a6482SHong Zhang     }
423a48a6482SHong Zhang 
424ef588d5cSRichard Tran Mills     _mm256_storeu_pd(y + i * 8, vec_y);
425ef588d5cSRichard Tran Mills     _mm256_storeu_pd(y + i * 8 + 4, vec_y2);
426a48a6482SHong Zhang   }
42721cec45eSHong Zhang #elif defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
428d4002b98SHong Zhang   for (i = 0; i < totalslices; i++) { /* loop over full slices */
429d4002b98SHong Zhang     PetscPrefetchBlock(acolidx, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
430d4002b98SHong Zhang     PetscPrefetchBlock(aval, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
431d4002b98SHong Zhang 
432d4002b98SHong Zhang     vec_y  = _mm256_setzero_pd();
433d4002b98SHong Zhang     vec_y2 = _mm256_setzero_pd();
434d4002b98SHong Zhang 
435d4002b98SHong Zhang     /* last slice may have padding rows. Don't use vectorization. */
436d4002b98SHong Zhang     if (i == totalslices - 1 && (A->rmap->n & 0x07)) {
437d4002b98SHong Zhang       rows_left = A->rmap->n - 8 * i;
438d4002b98SHong Zhang       for (r = 0; r < rows_left; ++r) {
439d4002b98SHong Zhang         yval       = (MatScalar)0;
440d4002b98SHong Zhang         row        = 8 * i + r;
441d4002b98SHong Zhang         nnz_in_row = a->rlen[row];
442d4002b98SHong Zhang         for (j = 0; j < nnz_in_row; ++j) yval += aval[8 * j + r] * x[acolidx[8 * j + r]];
443d4002b98SHong Zhang         y[row] = yval;
444d4002b98SHong Zhang       }
445d4002b98SHong Zhang       break;
446d4002b98SHong Zhang     }
447d4002b98SHong Zhang 
448d4002b98SHong Zhang   /* Process slice of height 8 (512 bits) via two subslices of height 4 (256 bits) via AVX */
449a48a6482SHong Zhang   #pragma novector
450a48a6482SHong Zhang   #pragma unroll(2)
4517285fed1SHong Zhang     for (j = a->sliidx[i]; j < a->sliidx[i + 1]; j += 8) {
452d4002b98SHong Zhang       vec_vals  = _mm256_loadu_pd(aval);
453165f9cc3SJed Brown       vec_x_tmp = _mm_setzero_pd();
454d4002b98SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
455d4002b98SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
456d4002b98SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 0);
457d4002b98SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
458d4002b98SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
459d4002b98SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 1);
460d4002b98SHong Zhang       vec_y     = _mm256_add_pd(_mm256_mul_pd(vec_x, vec_vals), vec_y);
461d4002b98SHong Zhang       aval += 4;
462d4002b98SHong Zhang 
463d4002b98SHong Zhang       vec_vals  = _mm256_loadu_pd(aval);
464d4002b98SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
465d4002b98SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
466d4002b98SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 0);
467d4002b98SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
468d4002b98SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
469d4002b98SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 1);
470d4002b98SHong Zhang       vec_y2    = _mm256_add_pd(_mm256_mul_pd(vec_x, vec_vals), vec_y2);
471d4002b98SHong Zhang       aval += 4;
472d4002b98SHong Zhang     }
473d4002b98SHong Zhang 
474d4002b98SHong Zhang     _mm256_storeu_pd(y + i * 8, vec_y);
475d4002b98SHong Zhang     _mm256_storeu_pd(y + i * 8 + 4, vec_y2);
476d4002b98SHong Zhang   }
477d4002b98SHong Zhang #else
478d4002b98SHong Zhang   for (i = 0; i < totalslices; i++) { /* loop over slices */
479*2d1451d4SHong Zhang     for (j = 0; j < SLICE_HEIGHT; j++) {
480*2d1451d4SHong Zhang       sum[j] = 0.0;
481*2d1451d4SHong Zhang       for (k = a->sliidx[i] + j; k < a->sliidx[i + 1]; k += SLICE_HEIGHT) sum[j] += aval[k] * x[acolidx[k]];
482d4002b98SHong Zhang     }
483*2d1451d4SHong Zhang     if (i == totalslices - 1 && (A->rmap->n % SLICE_HEIGHT)) { /* if last slice has padding rows */
484*2d1451d4SHong Zhang       for (j = 0; j < (A->rmap->n % SLICE_HEIGHT); j++) y[SLICE_HEIGHT * i + j] = sum[j];
485d4002b98SHong Zhang     } else {
486*2d1451d4SHong Zhang       for (j = 0; j < SLICE_HEIGHT; j++) y[SLICE_HEIGHT * i + j] = sum[j];
487d4002b98SHong Zhang     }
488d4002b98SHong Zhang   }
489d4002b98SHong Zhang #endif
490d4002b98SHong Zhang 
4919566063dSJacob Faibussowitsch   PetscCall(PetscLogFlops(2.0 * a->nz - a->nonzerorowcnt)); /* theoretical minimal FLOPs */
4929566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayRead(xx, &x));
4939566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(yy, &y));
4943ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
495d4002b98SHong Zhang }
496d4002b98SHong Zhang 
497d4002b98SHong Zhang #include <../src/mat/impls/aij/seq/ftn-kernels/fmultadd.h>
498d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultAdd_SeqSELL(Mat A, Vec xx, Vec yy, Vec zz)
499d71ae5a4SJacob Faibussowitsch {
500d4002b98SHong Zhang   Mat_SeqSELL       *a = (Mat_SeqSELL *)A->data;
501d4002b98SHong Zhang   PetscScalar       *y, *z;
502d4002b98SHong Zhang   const PetscScalar *x;
503d4002b98SHong Zhang   const MatScalar   *aval        = a->val;
504d4002b98SHong Zhang   PetscInt           totalslices = a->totalslices;
505d4002b98SHong Zhang   const PetscInt    *acolidx     = a->colidx;
506d4002b98SHong Zhang   PetscInt           i, j;
507d4002b98SHong Zhang #if defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX512F__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
5087285fed1SHong Zhang   __m512d  vec_x, vec_y, vec_vals;
509d4002b98SHong Zhang   __m256i  vec_idx;
510d4002b98SHong Zhang   __mmask8 mask;
5117285fed1SHong Zhang   __m512d  vec_x2, vec_y2, vec_vals2, vec_x3, vec_y3, vec_vals3, vec_x4, vec_y4, vec_vals4;
5127285fed1SHong Zhang   __m256i  vec_idx2, vec_idx3, vec_idx4;
51321cec45eSHong Zhang #elif defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
5147285fed1SHong Zhang   __m128d   vec_x_tmp;
5157285fed1SHong Zhang   __m256d   vec_x, vec_y, vec_y2, vec_vals;
5167285fed1SHong Zhang   MatScalar yval;
5177285fed1SHong Zhang   PetscInt  r, row, nnz_in_row;
518d4002b98SHong Zhang #else
519*2d1451d4SHong Zhang   PetscInt    k;
520*2d1451d4SHong Zhang   PetscScalar sum[SLICE_HEIGHT];
521d4002b98SHong Zhang #endif
522d4002b98SHong Zhang 
523d4002b98SHong Zhang #if defined(PETSC_HAVE_PRAGMA_DISJOINT)
524d4002b98SHong Zhang   #pragma disjoint(*x, *y, *aval)
525d4002b98SHong Zhang #endif
526d4002b98SHong Zhang 
527d4002b98SHong Zhang   PetscFunctionBegin;
528*2d1451d4SHong Zhang   if (!a->nz) {
529*2d1451d4SHong Zhang     PetscCall(VecCopy(yy, zz));
530*2d1451d4SHong Zhang     PetscFunctionReturn(PETSC_SUCCESS);
531*2d1451d4SHong Zhang   }
5329566063dSJacob Faibussowitsch   PetscCall(VecGetArrayRead(xx, &x));
5339566063dSJacob Faibussowitsch   PetscCall(VecGetArrayPair(yy, zz, &y, &z));
534d4002b98SHong Zhang #if defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX512F__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
5357285fed1SHong Zhang   for (i = 0; i < totalslices; i++) { /* loop over slices */
5367285fed1SHong Zhang     PetscPrefetchBlock(acolidx, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
5377285fed1SHong Zhang     PetscPrefetchBlock(aval, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
5387285fed1SHong Zhang 
539d4002b98SHong Zhang     if (i == totalslices - 1 && A->rmap->n & 0x07) { /* if last slice has padding rows */
540d4002b98SHong Zhang       mask  = (__mmask8)(0xff >> (8 - (A->rmap->n & 0x07)));
541ef588d5cSRichard Tran Mills       vec_y = _mm512_mask_loadu_pd(vec_y, mask, &y[8 * i]);
5427285fed1SHong Zhang     } else {
543ef588d5cSRichard Tran Mills       vec_y = _mm512_loadu_pd(&y[8 * i]);
5447285fed1SHong Zhang     }
5457285fed1SHong Zhang     vec_y2 = _mm512_setzero_pd();
5467285fed1SHong Zhang     vec_y3 = _mm512_setzero_pd();
5477285fed1SHong Zhang     vec_y4 = _mm512_setzero_pd();
5487285fed1SHong Zhang 
549da81f932SPierre Jolivet     j = a->sliidx[i] >> 3; /* 8 bytes are read at each time, corresponding to a slice column */
5507285fed1SHong Zhang     switch ((a->sliidx[i + 1] - a->sliidx[i]) / 8 & 3) {
5517285fed1SHong Zhang     case 3:
5527285fed1SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
5539371c9d4SSatish Balay       acolidx += 8;
5549371c9d4SSatish Balay       aval += 8;
5557285fed1SHong Zhang       AVX512_Mult_Private(vec_idx2, vec_x2, vec_vals2, vec_y2);
5569371c9d4SSatish Balay       acolidx += 8;
5579371c9d4SSatish Balay       aval += 8;
5587285fed1SHong Zhang       AVX512_Mult_Private(vec_idx3, vec_x3, vec_vals3, vec_y3);
5599371c9d4SSatish Balay       acolidx += 8;
5609371c9d4SSatish Balay       aval += 8;
5617285fed1SHong Zhang       j += 3;
5627285fed1SHong Zhang       break;
5637285fed1SHong Zhang     case 2:
5647285fed1SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
5659371c9d4SSatish Balay       acolidx += 8;
5669371c9d4SSatish Balay       aval += 8;
5677285fed1SHong Zhang       AVX512_Mult_Private(vec_idx2, vec_x2, vec_vals2, vec_y2);
5689371c9d4SSatish Balay       acolidx += 8;
5699371c9d4SSatish Balay       aval += 8;
5707285fed1SHong Zhang       j += 2;
5717285fed1SHong Zhang       break;
5727285fed1SHong Zhang     case 1:
5737285fed1SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
5749371c9d4SSatish Balay       acolidx += 8;
5759371c9d4SSatish Balay       aval += 8;
5767285fed1SHong Zhang       j += 1;
5777285fed1SHong Zhang       break;
5787285fed1SHong Zhang     }
5797285fed1SHong Zhang   #pragma novector
5807285fed1SHong Zhang     for (; j < (a->sliidx[i + 1] >> 3); j += 4) {
5817285fed1SHong Zhang       AVX512_Mult_Private(vec_idx, vec_x, vec_vals, vec_y);
5829371c9d4SSatish Balay       acolidx += 8;
5839371c9d4SSatish Balay       aval += 8;
5847285fed1SHong Zhang       AVX512_Mult_Private(vec_idx2, vec_x2, vec_vals2, vec_y2);
5859371c9d4SSatish Balay       acolidx += 8;
5869371c9d4SSatish Balay       aval += 8;
5877285fed1SHong Zhang       AVX512_Mult_Private(vec_idx3, vec_x3, vec_vals3, vec_y3);
5889371c9d4SSatish Balay       acolidx += 8;
5899371c9d4SSatish Balay       aval += 8;
5907285fed1SHong Zhang       AVX512_Mult_Private(vec_idx4, vec_x4, vec_vals4, vec_y4);
5919371c9d4SSatish Balay       acolidx += 8;
5929371c9d4SSatish Balay       aval += 8;
5937285fed1SHong Zhang     }
5947285fed1SHong Zhang 
5957285fed1SHong Zhang     vec_y = _mm512_add_pd(vec_y, vec_y2);
5967285fed1SHong Zhang     vec_y = _mm512_add_pd(vec_y, vec_y3);
5977285fed1SHong Zhang     vec_y = _mm512_add_pd(vec_y, vec_y4);
5987285fed1SHong Zhang     if (i == totalslices - 1 && A->rmap->n & 0x07) { /* if last slice has padding rows */
599ef588d5cSRichard Tran Mills       _mm512_mask_storeu_pd(&z[8 * i], mask, vec_y);
600d4002b98SHong Zhang     } else {
601ef588d5cSRichard Tran Mills       _mm512_storeu_pd(&z[8 * i], vec_y);
602d4002b98SHong Zhang     }
6037285fed1SHong Zhang   }
60421cec45eSHong Zhang #elif defined(PETSC_HAVE_IMMINTRIN_H) && defined(__AVX__) && defined(PETSC_USE_REAL_DOUBLE) && !defined(PETSC_USE_COMPLEX) && !defined(PETSC_USE_64BIT_INDICES)
6057285fed1SHong Zhang   for (i = 0; i < totalslices; i++) { /* loop over full slices */
6067285fed1SHong Zhang     PetscPrefetchBlock(acolidx, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
6077285fed1SHong Zhang     PetscPrefetchBlock(aval, a->sliidx[i + 1] - a->sliidx[i], 0, PETSC_PREFETCH_HINT_T0);
6087285fed1SHong Zhang 
6097285fed1SHong Zhang     /* last slice may have padding rows. Don't use vectorization. */
6107285fed1SHong Zhang     if (i == totalslices - 1 && (A->rmap->n & 0x07)) {
6117285fed1SHong Zhang       for (r = 0; r < (A->rmap->n & 0x07); ++r) {
6127285fed1SHong Zhang         row        = 8 * i + r;
6137285fed1SHong Zhang         yval       = (MatScalar)0.0;
6147285fed1SHong Zhang         nnz_in_row = a->rlen[row];
6157285fed1SHong Zhang         for (j = 0; j < nnz_in_row; ++j) yval += aval[8 * j + r] * x[acolidx[8 * j + r]];
6167285fed1SHong Zhang         z[row] = y[row] + yval;
6177285fed1SHong Zhang       }
6187285fed1SHong Zhang       break;
6197285fed1SHong Zhang     }
6207285fed1SHong Zhang 
6217285fed1SHong Zhang     vec_y  = _mm256_loadu_pd(y + 8 * i);
6227285fed1SHong Zhang     vec_y2 = _mm256_loadu_pd(y + 8 * i + 4);
6237285fed1SHong Zhang 
6247285fed1SHong Zhang     /* Process slice of height 8 (512 bits) via two subslices of height 4 (256 bits) via AVX */
6257285fed1SHong Zhang     for (j = a->sliidx[i]; j < a->sliidx[i + 1]; j += 8) {
6267285fed1SHong Zhang       vec_vals  = _mm256_loadu_pd(aval);
627165f9cc3SJed Brown       vec_x_tmp = _mm_setzero_pd();
6287285fed1SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
6297285fed1SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
630165f9cc3SJed Brown       vec_x     = _mm256_setzero_pd();
6317285fed1SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 0);
6327285fed1SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
6337285fed1SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
6347285fed1SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 1);
6357285fed1SHong Zhang       vec_y     = _mm256_add_pd(_mm256_mul_pd(vec_x, vec_vals), vec_y);
6367285fed1SHong Zhang       aval += 4;
6377285fed1SHong Zhang 
6387285fed1SHong Zhang       vec_vals  = _mm256_loadu_pd(aval);
6397285fed1SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
6407285fed1SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
6417285fed1SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 0);
6427285fed1SHong Zhang       vec_x_tmp = _mm_loadl_pd(vec_x_tmp, x + *acolidx++);
6437285fed1SHong Zhang       vec_x_tmp = _mm_loadh_pd(vec_x_tmp, x + *acolidx++);
6447285fed1SHong Zhang       vec_x     = _mm256_insertf128_pd(vec_x, vec_x_tmp, 1);
6457285fed1SHong Zhang       vec_y2    = _mm256_add_pd(_mm256_mul_pd(vec_x, vec_vals), vec_y2);
6467285fed1SHong Zhang       aval += 4;
6477285fed1SHong Zhang     }
6487285fed1SHong Zhang 
6497285fed1SHong Zhang     _mm256_storeu_pd(z + i * 8, vec_y);
6507285fed1SHong Zhang     _mm256_storeu_pd(z + i * 8 + 4, vec_y2);
6517285fed1SHong Zhang   }
652d4002b98SHong Zhang #else
6537285fed1SHong Zhang   for (i = 0; i < totalslices; i++) { /* loop over slices */
654*2d1451d4SHong Zhang     for (j = 0; j < SLICE_HEIGHT; j++) {
655*2d1451d4SHong Zhang       sum[j] = 0.0;
656*2d1451d4SHong Zhang       for (k = a->sliidx[i] + j; k < a->sliidx[i + 1]; k += SLICE_HEIGHT) sum[j] += aval[k] * x[acolidx[k]];
657d4002b98SHong Zhang     }
658*2d1451d4SHong Zhang     if (i == totalslices - 1 && (A->rmap->n % SLICE_HEIGHT)) {
659*2d1451d4SHong Zhang       for (j = 0; j < (A->rmap->n % SLICE_HEIGHT); j++) z[SLICE_HEIGHT * i + j] = y[SLICE_HEIGHT * i + j] + sum[j];
660d4002b98SHong Zhang     } else {
661*2d1451d4SHong Zhang       for (j = 0; j < SLICE_HEIGHT; j++) z[SLICE_HEIGHT * i + j] = y[SLICE_HEIGHT * i + j] + sum[j];
6627285fed1SHong Zhang     }
663d4002b98SHong Zhang   }
664d4002b98SHong Zhang #endif
665d4002b98SHong Zhang 
6669566063dSJacob Faibussowitsch   PetscCall(PetscLogFlops(2.0 * a->nz));
6679566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayRead(xx, &x));
6689566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayPair(yy, zz, &y, &z));
6693ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
670d4002b98SHong Zhang }
671d4002b98SHong Zhang 
672d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultTransposeAdd_SeqSELL(Mat A, Vec xx, Vec zz, Vec yy)
673d71ae5a4SJacob Faibussowitsch {
674d4002b98SHong Zhang   Mat_SeqSELL       *a = (Mat_SeqSELL *)A->data;
675d4002b98SHong Zhang   PetscScalar       *y;
676d4002b98SHong Zhang   const PetscScalar *x;
677d4002b98SHong Zhang   const MatScalar   *aval    = a->val;
678d4002b98SHong Zhang   const PetscInt    *acolidx = a->colidx;
6797285fed1SHong Zhang   PetscInt           i, j, r, row, nnz_in_row, totalslices = a->totalslices;
680d4002b98SHong Zhang 
681d4002b98SHong Zhang #if defined(PETSC_HAVE_PRAGMA_DISJOINT)
682d4002b98SHong Zhang   #pragma disjoint(*x, *y, *aval)
683d4002b98SHong Zhang #endif
684d4002b98SHong Zhang 
685d4002b98SHong Zhang   PetscFunctionBegin;
686b94d7dedSBarry Smith   if (A->symmetric == PETSC_BOOL3_TRUE) {
6879566063dSJacob Faibussowitsch     PetscCall(MatMultAdd_SeqSELL(A, xx, zz, yy));
6883ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
6899fc32365SStefano Zampini   }
6909566063dSJacob Faibussowitsch   if (zz != yy) PetscCall(VecCopy(zz, yy));
691*2d1451d4SHong Zhang 
692*2d1451d4SHong Zhang   if (a->nz) {
6939566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(xx, &x));
6949566063dSJacob Faibussowitsch     PetscCall(VecGetArray(yy, &y));
695d4002b98SHong Zhang     for (i = 0; i < a->totalslices; i++) { /* loop over slices */
696*2d1451d4SHong Zhang       if (i == totalslices - 1 && (A->rmap->n % SLICE_HEIGHT)) {
697*2d1451d4SHong Zhang         for (r = 0; r < (A->rmap->n % SLICE_HEIGHT); ++r) {
698*2d1451d4SHong Zhang           row        = SLICE_HEIGHT * i + r;
6997285fed1SHong Zhang           nnz_in_row = a->rlen[row];
700*2d1451d4SHong Zhang           for (j = 0; j < nnz_in_row; ++j) y[acolidx[SLICE_HEIGHT * j + r]] += aval[SLICE_HEIGHT * j + r] * x[row];
7017285fed1SHong Zhang         }
7027285fed1SHong Zhang         break;
7037285fed1SHong Zhang       }
704*2d1451d4SHong Zhang       for (r = 0; r < SLICE_HEIGHT; ++r)
705*2d1451d4SHong Zhang         for (j = a->sliidx[i] + r; j < a->sliidx[i + 1]; j += SLICE_HEIGHT) y[acolidx[j]] += aval[j] * x[SLICE_HEIGHT * i + r];
706d4002b98SHong Zhang     }
707*2d1451d4SHong Zhang     PetscCall(PetscLogFlops(2.0 * a->nz));
7089566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(xx, &x));
7099566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(yy, &y));
710*2d1451d4SHong Zhang   }
7113ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
712d4002b98SHong Zhang }
713d4002b98SHong Zhang 
714d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultTranspose_SeqSELL(Mat A, Vec xx, Vec yy)
715d71ae5a4SJacob Faibussowitsch {
716d4002b98SHong Zhang   PetscFunctionBegin;
717b94d7dedSBarry Smith   if (A->symmetric == PETSC_BOOL3_TRUE) {
7189566063dSJacob Faibussowitsch     PetscCall(MatMult_SeqSELL(A, xx, yy));
7199fc32365SStefano Zampini   } else {
7209566063dSJacob Faibussowitsch     PetscCall(VecSet(yy, 0.0));
7219566063dSJacob Faibussowitsch     PetscCall(MatMultTransposeAdd_SeqSELL(A, xx, yy, yy));
7229fc32365SStefano Zampini   }
7233ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
724d4002b98SHong Zhang }
725d4002b98SHong Zhang 
726d4002b98SHong Zhang /*
727d4002b98SHong Zhang      Checks for missing diagonals
728d4002b98SHong Zhang */
729d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMissingDiagonal_SeqSELL(Mat A, PetscBool *missing, PetscInt *d)
730d71ae5a4SJacob Faibussowitsch {
731d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
732d4002b98SHong Zhang   PetscInt    *diag, i;
733d4002b98SHong Zhang 
734d4002b98SHong Zhang   PetscFunctionBegin;
735d4002b98SHong Zhang   *missing = PETSC_FALSE;
736d4002b98SHong Zhang   if (A->rmap->n > 0 && !(a->colidx)) {
737d4002b98SHong Zhang     *missing = PETSC_TRUE;
738d4002b98SHong Zhang     if (d) *d = 0;
7399566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A, "Matrix has no entries therefore is missing diagonal\n"));
740d4002b98SHong Zhang   } else {
741d4002b98SHong Zhang     diag = a->diag;
742d4002b98SHong Zhang     for (i = 0; i < A->rmap->n; i++) {
743d4002b98SHong Zhang       if (diag[i] == -1) {
744d4002b98SHong Zhang         *missing = PETSC_TRUE;
745d4002b98SHong Zhang         if (d) *d = i;
7469566063dSJacob Faibussowitsch         PetscCall(PetscInfo(A, "Matrix is missing diagonal number %" PetscInt_FMT "\n", i));
747d4002b98SHong Zhang         break;
748d4002b98SHong Zhang       }
749d4002b98SHong Zhang     }
750d4002b98SHong Zhang   }
7513ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
752d4002b98SHong Zhang }
753d4002b98SHong Zhang 
754d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMarkDiagonal_SeqSELL(Mat A)
755d71ae5a4SJacob Faibussowitsch {
756d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
757d4002b98SHong Zhang   PetscInt     i, j, m = A->rmap->n, shift;
758d4002b98SHong Zhang 
759d4002b98SHong Zhang   PetscFunctionBegin;
760d4002b98SHong Zhang   if (!a->diag) {
7619566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(m, &a->diag));
762d4002b98SHong Zhang     a->free_diag = PETSC_TRUE;
763d4002b98SHong Zhang   }
764d4002b98SHong Zhang   for (i = 0; i < m; i++) {                                      /* loop over rows */
765*2d1451d4SHong Zhang     shift      = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT; /* starting index of the row i */
766d4002b98SHong Zhang     a->diag[i] = -1;
767d4002b98SHong Zhang     for (j = 0; j < a->rlen[i]; j++) {
768*2d1451d4SHong Zhang       if (a->colidx[shift + SLICE_HEIGHT * j] == i) {
769*2d1451d4SHong Zhang         a->diag[i] = shift + SLICE_HEIGHT * j;
770d4002b98SHong Zhang         break;
771d4002b98SHong Zhang       }
772d4002b98SHong Zhang     }
773d4002b98SHong Zhang   }
7743ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
775d4002b98SHong Zhang }
776d4002b98SHong Zhang 
777d4002b98SHong Zhang /*
778d4002b98SHong Zhang   Negative shift indicates do not generate an error if there is a zero diagonal, just invert it anyways
779d4002b98SHong Zhang */
780d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInvertDiagonal_SeqSELL(Mat A, PetscScalar omega, PetscScalar fshift)
781d71ae5a4SJacob Faibussowitsch {
782d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
783d4002b98SHong Zhang   PetscInt     i, *diag, m = A->rmap->n;
784d4002b98SHong Zhang   MatScalar   *val = a->val;
785d4002b98SHong Zhang   PetscScalar *idiag, *mdiag;
786d4002b98SHong Zhang 
787d4002b98SHong Zhang   PetscFunctionBegin;
7883ba16761SJacob Faibussowitsch   if (a->idiagvalid) PetscFunctionReturn(PETSC_SUCCESS);
7899566063dSJacob Faibussowitsch   PetscCall(MatMarkDiagonal_SeqSELL(A));
790d4002b98SHong Zhang   diag = a->diag;
791d4002b98SHong Zhang   if (!a->idiag) {
7929566063dSJacob Faibussowitsch     PetscCall(PetscMalloc3(m, &a->idiag, m, &a->mdiag, m, &a->ssor_work));
793d4002b98SHong Zhang     val = a->val;
794d4002b98SHong Zhang   }
795d4002b98SHong Zhang   mdiag = a->mdiag;
796d4002b98SHong Zhang   idiag = a->idiag;
797d4002b98SHong Zhang 
798d4002b98SHong Zhang   if (omega == 1.0 && PetscRealPart(fshift) <= 0.0) {
799d4002b98SHong Zhang     for (i = 0; i < m; i++) {
800d4002b98SHong Zhang       mdiag[i] = val[diag[i]];
801d4002b98SHong Zhang       if (!PetscAbsScalar(mdiag[i])) { /* zero diagonal */
8020fdf79fbSJacob Faibussowitsch         PetscCheck(PetscRealPart(fshift), PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Zero diagonal on row %" PetscInt_FMT, i);
8039566063dSJacob Faibussowitsch         PetscCall(PetscInfo(A, "Zero diagonal on row %" PetscInt_FMT "\n", i));
804d4002b98SHong Zhang         A->factorerrortype             = MAT_FACTOR_NUMERIC_ZEROPIVOT;
805d4002b98SHong Zhang         A->factorerror_zeropivot_value = 0.0;
806d4002b98SHong Zhang         A->factorerror_zeropivot_row   = i;
807d4002b98SHong Zhang       }
808d4002b98SHong Zhang       idiag[i] = 1.0 / val[diag[i]];
809d4002b98SHong Zhang     }
8109566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(m));
811d4002b98SHong Zhang   } else {
812d4002b98SHong Zhang     for (i = 0; i < m; i++) {
813d4002b98SHong Zhang       mdiag[i] = val[diag[i]];
814d4002b98SHong Zhang       idiag[i] = omega / (fshift + val[diag[i]]);
815d4002b98SHong Zhang     }
8169566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(2.0 * m));
817d4002b98SHong Zhang   }
818d4002b98SHong Zhang   a->idiagvalid = PETSC_TRUE;
8193ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
820d4002b98SHong Zhang }
821d4002b98SHong Zhang 
822d71ae5a4SJacob Faibussowitsch PetscErrorCode MatZeroEntries_SeqSELL(Mat A)
823d71ae5a4SJacob Faibussowitsch {
824d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
825d4002b98SHong Zhang 
826d4002b98SHong Zhang   PetscFunctionBegin;
8279566063dSJacob Faibussowitsch   PetscCall(PetscArrayzero(a->val, a->sliidx[a->totalslices]));
8289566063dSJacob Faibussowitsch   PetscCall(MatSeqSELLInvalidateDiagonal(A));
8293ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
830d4002b98SHong Zhang }
831d4002b98SHong Zhang 
832d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDestroy_SeqSELL(Mat A)
833d71ae5a4SJacob Faibussowitsch {
834d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
835d4002b98SHong Zhang 
836d4002b98SHong Zhang   PetscFunctionBegin;
837d4002b98SHong Zhang #if defined(PETSC_USE_LOG)
8383ba16761SJacob Faibussowitsch   PetscCall(PetscLogObjectState((PetscObject)A, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT ", NZ=%" PetscInt_FMT, A->rmap->n, A->cmap->n, a->nz));
839d4002b98SHong Zhang #endif
8409566063dSJacob Faibussowitsch   PetscCall(MatSeqXSELLFreeSELL(A, &a->val, &a->colidx));
8419566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&a->row));
8429566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&a->col));
8439566063dSJacob Faibussowitsch   PetscCall(PetscFree(a->diag));
8449566063dSJacob Faibussowitsch   PetscCall(PetscFree(a->rlen));
8459566063dSJacob Faibussowitsch   PetscCall(PetscFree(a->sliidx));
8469566063dSJacob Faibussowitsch   PetscCall(PetscFree3(a->idiag, a->mdiag, a->ssor_work));
8479566063dSJacob Faibussowitsch   PetscCall(PetscFree(a->solve_work));
8489566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&a->icol));
8499566063dSJacob Faibussowitsch   PetscCall(PetscFree(a->saved_values));
8509566063dSJacob Faibussowitsch   PetscCall(PetscFree2(a->getrowcols, a->getrowvals));
851d4002b98SHong Zhang 
8529566063dSJacob Faibussowitsch   PetscCall(PetscFree(A->data));
853d4002b98SHong Zhang 
8549566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)A, NULL));
8559566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatStoreValues_C", NULL));
8569566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatRetrieveValues_C", NULL));
8579566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSeqSELLSetPreallocation_C", NULL));
8582e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSeqSELLGetArray_C", NULL));
8592e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSeqSELLRestoreArray_C", NULL));
860*2d1451d4SHong Zhang   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_SeqSELL_SeqAIJ_C", NULL));
861*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
862*2d1451d4SHong Zhang   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_SeqSELL_SeqSELLCUDA_C", NULL));
863*2d1451d4SHong Zhang #endif
8643ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
865d4002b98SHong Zhang }
866d4002b98SHong Zhang 
867d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetOption_SeqSELL(Mat A, MatOption op, PetscBool flg)
868d71ae5a4SJacob Faibussowitsch {
869d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
870d4002b98SHong Zhang 
871d4002b98SHong Zhang   PetscFunctionBegin;
872d4002b98SHong Zhang   switch (op) {
873d71ae5a4SJacob Faibussowitsch   case MAT_ROW_ORIENTED:
874d71ae5a4SJacob Faibussowitsch     a->roworiented = flg;
875d71ae5a4SJacob Faibussowitsch     break;
876d71ae5a4SJacob Faibussowitsch   case MAT_KEEP_NONZERO_PATTERN:
877d71ae5a4SJacob Faibussowitsch     a->keepnonzeropattern = flg;
878d71ae5a4SJacob Faibussowitsch     break;
879d71ae5a4SJacob Faibussowitsch   case MAT_NEW_NONZERO_LOCATIONS:
880d71ae5a4SJacob Faibussowitsch     a->nonew = (flg ? 0 : 1);
881d71ae5a4SJacob Faibussowitsch     break;
882d71ae5a4SJacob Faibussowitsch   case MAT_NEW_NONZERO_LOCATION_ERR:
883d71ae5a4SJacob Faibussowitsch     a->nonew = (flg ? -1 : 0);
884d71ae5a4SJacob Faibussowitsch     break;
885d71ae5a4SJacob Faibussowitsch   case MAT_NEW_NONZERO_ALLOCATION_ERR:
886d71ae5a4SJacob Faibussowitsch     a->nonew = (flg ? -2 : 0);
887d71ae5a4SJacob Faibussowitsch     break;
888d71ae5a4SJacob Faibussowitsch   case MAT_UNUSED_NONZERO_LOCATION_ERR:
889d71ae5a4SJacob Faibussowitsch     a->nounused = (flg ? -1 : 0);
890d71ae5a4SJacob Faibussowitsch     break;
8918c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
892d4002b98SHong Zhang   case MAT_IGNORE_OFF_PROC_ENTRIES:
893d4002b98SHong Zhang   case MAT_USE_HASH_TABLE:
894d71ae5a4SJacob Faibussowitsch   case MAT_SORTED_FULL:
895d71ae5a4SJacob Faibussowitsch     PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op]));
896d71ae5a4SJacob Faibussowitsch     break;
897d4002b98SHong Zhang   case MAT_SPD:
898d4002b98SHong Zhang   case MAT_SYMMETRIC:
899d4002b98SHong Zhang   case MAT_STRUCTURALLY_SYMMETRIC:
900d4002b98SHong Zhang   case MAT_HERMITIAN:
901d4002b98SHong Zhang   case MAT_SYMMETRY_ETERNAL:
902b94d7dedSBarry Smith   case MAT_STRUCTURAL_SYMMETRY_ETERNAL:
903b94d7dedSBarry Smith   case MAT_SPD_ETERNAL:
904d4002b98SHong Zhang     /* These options are handled directly by MatSetOption() */
905d4002b98SHong Zhang     break;
906d71ae5a4SJacob Faibussowitsch   default:
907d71ae5a4SJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unknown option %d", op);
908d4002b98SHong Zhang   }
9093ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
910d4002b98SHong Zhang }
911d4002b98SHong Zhang 
912d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_SeqSELL(Mat A, Vec v)
913d71ae5a4SJacob Faibussowitsch {
914d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
915d4002b98SHong Zhang   PetscInt     i, j, n, shift;
916d4002b98SHong Zhang   PetscScalar *x, zero = 0.0;
917d4002b98SHong Zhang 
918d4002b98SHong Zhang   PetscFunctionBegin;
9199566063dSJacob Faibussowitsch   PetscCall(VecGetLocalSize(v, &n));
92008401ef6SPierre Jolivet   PetscCheck(n == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming matrix and vector");
921d4002b98SHong Zhang 
922d4002b98SHong Zhang   if (A->factortype == MAT_FACTOR_ILU || A->factortype == MAT_FACTOR_LU) {
923d4002b98SHong Zhang     PetscInt *diag = a->diag;
9249566063dSJacob Faibussowitsch     PetscCall(VecGetArray(v, &x));
925d4002b98SHong Zhang     for (i = 0; i < n; i++) x[i] = 1.0 / a->val[diag[i]];
9269566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(v, &x));
9273ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
928d4002b98SHong Zhang   }
929d4002b98SHong Zhang 
9309566063dSJacob Faibussowitsch   PetscCall(VecSet(v, zero));
9319566063dSJacob Faibussowitsch   PetscCall(VecGetArray(v, &x));
932d4002b98SHong Zhang   for (i = 0; i < n; i++) {                                 /* loop over rows */
933*2d1451d4SHong Zhang     shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT; /* starting index of the row i */
934d4002b98SHong Zhang     x[i]  = 0;
935d4002b98SHong Zhang     for (j = 0; j < a->rlen[i]; j++) {
936*2d1451d4SHong Zhang       if (a->colidx[shift + SLICE_HEIGHT * j] == i) {
937*2d1451d4SHong Zhang         x[i] = a->val[shift + SLICE_HEIGHT * j];
938d4002b98SHong Zhang         break;
939d4002b98SHong Zhang       }
940d4002b98SHong Zhang     }
941d4002b98SHong Zhang   }
9429566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(v, &x));
9433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
944d4002b98SHong Zhang }
945d4002b98SHong Zhang 
946d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDiagonalScale_SeqSELL(Mat A, Vec ll, Vec rr)
947d71ae5a4SJacob Faibussowitsch {
948d4002b98SHong Zhang   Mat_SeqSELL       *a = (Mat_SeqSELL *)A->data;
949d4002b98SHong Zhang   const PetscScalar *l, *r;
950d4002b98SHong Zhang   PetscInt           i, j, m, n, row;
951d4002b98SHong Zhang 
952d4002b98SHong Zhang   PetscFunctionBegin;
953d4002b98SHong Zhang   if (ll) {
954d4002b98SHong Zhang     /* The local size is used so that VecMPI can be passed to this routine
955d4002b98SHong Zhang        by MatDiagonalScale_MPISELL */
9569566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(ll, &m));
95708401ef6SPierre Jolivet     PetscCheck(m == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector wrong length");
9589566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(ll, &l));
959d4002b98SHong Zhang     for (i = 0; i < a->totalslices; i++) {                          /* loop over slices */
960*2d1451d4SHong Zhang       if (i == a->totalslices - 1 && (A->rmap->n % SLICE_HEIGHT)) { /* if last slice has padding rows */
961*2d1451d4SHong Zhang         for (j = a->sliidx[i], row = 0; j < a->sliidx[i + 1]; j++, row = (row + 1) % SLICE_HEIGHT) {
962*2d1451d4SHong Zhang           if (row < (A->rmap->n % SLICE_HEIGHT)) a->val[j] *= l[SLICE_HEIGHT * i + row];
963dab86139SHong Zhang         }
964dab86139SHong Zhang       } else {
965*2d1451d4SHong Zhang         for (j = a->sliidx[i], row = 0; j < a->sliidx[i + 1]; j++, row = (row + 1) % SLICE_HEIGHT) { a->val[j] *= l[SLICE_HEIGHT * i + row]; }
966d4002b98SHong Zhang       }
967dab86139SHong Zhang     }
9689566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(ll, &l));
9699566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(a->nz));
970d4002b98SHong Zhang   }
971d4002b98SHong Zhang   if (rr) {
9729566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(rr, &n));
97308401ef6SPierre Jolivet     PetscCheck(n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vector wrong length");
9749566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(rr, &r));
975d4002b98SHong Zhang     for (i = 0; i < a->totalslices; i++) {                          /* loop over slices */
976*2d1451d4SHong Zhang       if (i == a->totalslices - 1 && (A->rmap->n % SLICE_HEIGHT)) { /* if last slice has padding rows */
977*2d1451d4SHong Zhang         for (j = a->sliidx[i], row = 0; j < a->sliidx[i + 1]; j++, row = ((row + 1) % SLICE_HEIGHT)) {
978*2d1451d4SHong Zhang           if (row < (A->rmap->n % SLICE_HEIGHT)) a->val[j] *= r[a->colidx[j]];
979dab86139SHong Zhang         }
980dab86139SHong Zhang       } else {
981ad540459SPierre Jolivet         for (j = a->sliidx[i]; j < a->sliidx[i + 1]; j++) a->val[j] *= r[a->colidx[j]];
982d4002b98SHong Zhang       }
983dab86139SHong Zhang     }
9849566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(rr, &r));
9859566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(a->nz));
986d4002b98SHong Zhang   }
9879566063dSJacob Faibussowitsch   PetscCall(MatSeqSELLInvalidateDiagonal(A));
988*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
989*2d1451d4SHong Zhang   if (A->offloadmask != PETSC_OFFLOAD_UNALLOCATED) A->offloadmask = PETSC_OFFLOAD_CPU;
990*2d1451d4SHong Zhang #endif
9913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
992d4002b98SHong Zhang }
993d4002b98SHong Zhang 
994d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetValues_SeqSELL(Mat A, PetscInt m, const PetscInt im[], PetscInt n, const PetscInt in[], PetscScalar v[])
995d71ae5a4SJacob Faibussowitsch {
996d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
997d4002b98SHong Zhang   PetscInt    *cp, i, k, low, high, t, row, col, l;
998d4002b98SHong Zhang   PetscInt     shift;
999d4002b98SHong Zhang   MatScalar   *vp;
1000d4002b98SHong Zhang 
1001d4002b98SHong Zhang   PetscFunctionBegin;
100268aafef3SStefano Zampini   for (k = 0; k < m; k++) { /* loop over requested rows */
1003d4002b98SHong Zhang     row = im[k];
1004d4002b98SHong Zhang     if (row < 0) continue;
10056bdcaf15SBarry Smith     PetscCheck(row < A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large: row %" PetscInt_FMT " max %" PetscInt_FMT, row, A->rmap->n - 1);
1006*2d1451d4SHong Zhang     shift = a->sliidx[row / SLICE_HEIGHT] + (row % SLICE_HEIGHT); /* starting index of the row */
1007d4002b98SHong Zhang     cp    = a->colidx + shift;                                    /* pointer to the row */
1008d4002b98SHong Zhang     vp    = a->val + shift;                                       /* pointer to the row */
100968aafef3SStefano Zampini     for (l = 0; l < n; l++) {                                     /* loop over requested columns */
1010d4002b98SHong Zhang       col = in[l];
1011d4002b98SHong Zhang       if (col < 0) continue;
10126bdcaf15SBarry Smith       PetscCheck(col < A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large: row %" PetscInt_FMT " max %" PetscInt_FMT, col, A->cmap->n - 1);
10139371c9d4SSatish Balay       high = a->rlen[row];
10149371c9d4SSatish Balay       low  = 0; /* assume unsorted */
1015d4002b98SHong Zhang       while (high - low > 5) {
1016d4002b98SHong Zhang         t = (low + high) / 2;
1017*2d1451d4SHong Zhang         if (*(cp + SLICE_HEIGHT * t) > col) high = t;
1018d4002b98SHong Zhang         else low = t;
1019d4002b98SHong Zhang       }
1020d4002b98SHong Zhang       for (i = low; i < high; i++) {
1021*2d1451d4SHong Zhang         if (*(cp + SLICE_HEIGHT * i) > col) break;
1022*2d1451d4SHong Zhang         if (*(cp + SLICE_HEIGHT * i) == col) {
1023*2d1451d4SHong Zhang           *v++ = *(vp + SLICE_HEIGHT * i);
1024d4002b98SHong Zhang           goto finished;
1025d4002b98SHong Zhang         }
1026d4002b98SHong Zhang       }
1027d4002b98SHong Zhang       *v++ = 0.0;
1028d4002b98SHong Zhang     finished:;
1029d4002b98SHong Zhang     }
1030d4002b98SHong Zhang   }
10313ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1032d4002b98SHong Zhang }
1033d4002b98SHong Zhang 
1034d71ae5a4SJacob Faibussowitsch PetscErrorCode MatView_SeqSELL_ASCII(Mat A, PetscViewer viewer)
1035d71ae5a4SJacob Faibussowitsch {
1036d4002b98SHong Zhang   Mat_SeqSELL      *a = (Mat_SeqSELL *)A->data;
1037d4002b98SHong Zhang   PetscInt          i, j, m = A->rmap->n, shift;
1038d4002b98SHong Zhang   const char       *name;
1039d4002b98SHong Zhang   PetscViewerFormat format;
1040d4002b98SHong Zhang 
1041d4002b98SHong Zhang   PetscFunctionBegin;
10429566063dSJacob Faibussowitsch   PetscCall(PetscViewerGetFormat(viewer, &format));
1043d4002b98SHong Zhang   if (format == PETSC_VIEWER_ASCII_MATLAB) {
1044d4002b98SHong Zhang     PetscInt nofinalvalue = 0;
1045d4002b98SHong Zhang     /*
1046d4002b98SHong Zhang     if (m && ((a->i[m] == a->i[m-1]) || (a->j[a->nz-1] != A->cmap->n-1))) {
1047d4002b98SHong Zhang       nofinalvalue = 1;
1048d4002b98SHong Zhang     }
1049d4002b98SHong Zhang     */
10509566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_FALSE));
10519566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "%% Size = %" PetscInt_FMT " %" PetscInt_FMT " \n", m, A->cmap->n));
10529566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "%% Nonzeros = %" PetscInt_FMT " \n", a->nz));
1053d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
10549566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "zzz = zeros(%" PetscInt_FMT ",4);\n", a->nz + nofinalvalue));
1055d4002b98SHong Zhang #else
10569566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "zzz = zeros(%" PetscInt_FMT ",3);\n", a->nz + nofinalvalue));
1057d4002b98SHong Zhang #endif
10589566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "zzz = [\n"));
1059d4002b98SHong Zhang 
1060d4002b98SHong Zhang     for (i = 0; i < m; i++) {
1061*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
1062d4002b98SHong Zhang       for (j = 0; j < a->rlen[i]; j++) {
1063d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1064*2d1451d4SHong Zhang         PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " %" PetscInt_FMT "  %18.16e %18.16e\n", i + 1, a->colidx[shift + SLICE_HEIGHT * j] + 1, (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j]), (double)PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j])));
1065d4002b98SHong Zhang #else
1066*2d1451d4SHong Zhang         PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " %" PetscInt_FMT "  %18.16e\n", i + 1, a->colidx[shift + SLICE_HEIGHT * j] + 1, (double)a->val[shift + SLICE_HEIGHT * j]));
1067d4002b98SHong Zhang #endif
1068d4002b98SHong Zhang       }
1069d4002b98SHong Zhang     }
1070d4002b98SHong Zhang     /*
1071d4002b98SHong Zhang     if (nofinalvalue) {
1072d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
10739566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer,"%" PetscInt_FMT " %" PetscInt_FMT "  %18.16e %18.16e\n",m,A->cmap->n,0.,0.));
1074d4002b98SHong Zhang #else
10759566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer,"%" PetscInt_FMT " %" PetscInt_FMT "  %18.16e\n",m,A->cmap->n,0.0));
1076d4002b98SHong Zhang #endif
1077d4002b98SHong Zhang     }
1078d4002b98SHong Zhang     */
10799566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetName((PetscObject)A, &name));
10809566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "];\n %s = spconvert(zzz);\n", name));
10819566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_TRUE));
1082d4002b98SHong Zhang   } else if (format == PETSC_VIEWER_ASCII_FACTOR_INFO || format == PETSC_VIEWER_ASCII_INFO) {
10833ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
1084d4002b98SHong Zhang   } else if (format == PETSC_VIEWER_ASCII_COMMON) {
10859566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_FALSE));
1086d4002b98SHong Zhang     for (i = 0; i < m; i++) {
10879566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "row %" PetscInt_FMT ":", i));
1088*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
1089d4002b98SHong Zhang       for (j = 0; j < a->rlen[i]; j++) {
1090d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1091*2d1451d4SHong Zhang         if (PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j]) > 0.0 && PetscRealPart(a->val[shift + SLICE_HEIGHT * j]) != 0.0) {
1092*2d1451d4SHong Zhang           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g + %g i)", a->colidx[shift + SLICE_HEIGHT * j], (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j]), (double)PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j])));
1093*2d1451d4SHong Zhang         } else if (PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j]) < 0.0 && PetscRealPart(a->val[shift + SLICE_HEIGHT * j]) != 0.0) {
1094*2d1451d4SHong Zhang           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g - %g i)", a->colidx[shift + SLICE_HEIGHT * j], (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j]), (double)-PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j])));
1095*2d1451d4SHong Zhang         } else if (PetscRealPart(a->val[shift + SLICE_HEIGHT * j]) != 0.0) {
1096*2d1451d4SHong Zhang           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[shift + SLICE_HEIGHT * j], (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j])));
1097d4002b98SHong Zhang         }
1098d4002b98SHong Zhang #else
1099*2d1451d4SHong Zhang         if (a->val[shift + SLICE_HEIGHT * j] != 0.0) PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[shift + SLICE_HEIGHT * j], (double)a->val[shift + SLICE_HEIGHT * j]));
1100d4002b98SHong Zhang #endif
1101d4002b98SHong Zhang       }
11029566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "\n"));
1103d4002b98SHong Zhang     }
11049566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_TRUE));
1105d4002b98SHong Zhang   } else if (format == PETSC_VIEWER_ASCII_DENSE) {
1106d4002b98SHong Zhang     PetscInt    cnt = 0, jcnt;
1107d4002b98SHong Zhang     PetscScalar value;
1108d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1109d4002b98SHong Zhang     PetscBool realonly = PETSC_TRUE;
1110d4002b98SHong Zhang     for (i = 0; i < a->sliidx[a->totalslices]; i++) {
1111d4002b98SHong Zhang       if (PetscImaginaryPart(a->val[i]) != 0.0) {
1112d4002b98SHong Zhang         realonly = PETSC_FALSE;
1113d4002b98SHong Zhang         break;
1114d4002b98SHong Zhang       }
1115d4002b98SHong Zhang     }
1116d4002b98SHong Zhang #endif
1117d4002b98SHong Zhang 
11189566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_FALSE));
1119d4002b98SHong Zhang     for (i = 0; i < m; i++) {
1120d4002b98SHong Zhang       jcnt  = 0;
1121*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
1122d4002b98SHong Zhang       for (j = 0; j < A->cmap->n; j++) {
1123*2d1451d4SHong Zhang         if (jcnt < a->rlen[i] && j == a->colidx[shift + SLICE_HEIGHT * j]) {
1124d4002b98SHong Zhang           value = a->val[cnt++];
1125d4002b98SHong Zhang           jcnt++;
1126d4002b98SHong Zhang         } else {
1127d4002b98SHong Zhang           value = 0.0;
1128d4002b98SHong Zhang         }
1129d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1130d4002b98SHong Zhang         if (realonly) {
11319566063dSJacob Faibussowitsch           PetscCall(PetscViewerASCIIPrintf(viewer, " %7.5e ", (double)PetscRealPart(value)));
1132d4002b98SHong Zhang         } else {
11339566063dSJacob Faibussowitsch           PetscCall(PetscViewerASCIIPrintf(viewer, " %7.5e+%7.5e i ", (double)PetscRealPart(value), (double)PetscImaginaryPart(value)));
1134d4002b98SHong Zhang         }
1135d4002b98SHong Zhang #else
11369566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, " %7.5e ", (double)value));
1137d4002b98SHong Zhang #endif
1138d4002b98SHong Zhang       }
11399566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "\n"));
1140d4002b98SHong Zhang     }
11419566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_TRUE));
1142d4002b98SHong Zhang   } else if (format == PETSC_VIEWER_ASCII_MATRIXMARKET) {
1143d4002b98SHong Zhang     PetscInt fshift = 1;
11449566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_FALSE));
1145d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
11469566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "%%%%MatrixMarket matrix coordinate complex general\n"));
1147d4002b98SHong Zhang #else
11489566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "%%%%MatrixMarket matrix coordinate real general\n"));
1149d4002b98SHong Zhang #endif
11509566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " %" PetscInt_FMT " %" PetscInt_FMT "\n", m, A->cmap->n, a->nz));
1151d4002b98SHong Zhang     for (i = 0; i < m; i++) {
1152*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
1153d4002b98SHong Zhang       for (j = 0; j < a->rlen[i]; j++) {
1154d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1155*2d1451d4SHong Zhang         PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " %" PetscInt_FMT " %g %g\n", i + fshift, a->colidx[shift + SLICE_HEIGHT * j] + fshift, (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j]), (double)PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j])));
1156d4002b98SHong Zhang #else
1157*2d1451d4SHong Zhang         PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " %" PetscInt_FMT " %g\n", i + fshift, a->colidx[shift + SLICE_HEIGHT * j] + fshift, (double)a->val[shift + SLICE_HEIGHT * j]));
1158d4002b98SHong Zhang #endif
1159d4002b98SHong Zhang       }
1160d4002b98SHong Zhang     }
11619566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_TRUE));
116268aafef3SStefano Zampini   } else if (format == PETSC_VIEWER_NATIVE) {
116368aafef3SStefano Zampini     for (i = 0; i < a->totalslices; i++) { /* loop over slices */
116468aafef3SStefano Zampini       PetscInt row;
11659566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "slice %" PetscInt_FMT ": %" PetscInt_FMT " %" PetscInt_FMT "\n", i, a->sliidx[i], a->sliidx[i + 1]));
1166*2d1451d4SHong Zhang       for (j = a->sliidx[i], row = 0; j < a->sliidx[i + 1]; j++, row = (row + 1) % SLICE_HEIGHT) {
116768aafef3SStefano Zampini #if defined(PETSC_USE_COMPLEX)
116868aafef3SStefano Zampini         if (PetscImaginaryPart(a->val[j]) > 0.0) {
1169*2d1451d4SHong Zhang           PetscCall(PetscViewerASCIIPrintf(viewer, "  %" PetscInt_FMT " %" PetscInt_FMT " %g + %g i\n", SLICE_HEIGHT * i + row, a->colidx[j], (double)PetscRealPart(a->val[j]), (double)PetscImaginaryPart(a->val[j])));
117068aafef3SStefano Zampini         } else if (PetscImaginaryPart(a->val[j]) < 0.0) {
1171*2d1451d4SHong Zhang           PetscCall(PetscViewerASCIIPrintf(viewer, "  %" PetscInt_FMT " %" PetscInt_FMT " %g - %g i\n", SLICE_HEIGHT * i + row, a->colidx[j], (double)PetscRealPart(a->val[j]), -(double)PetscImaginaryPart(a->val[j])));
117268aafef3SStefano Zampini         } else {
1173*2d1451d4SHong Zhang           PetscCall(PetscViewerASCIIPrintf(viewer, "  %" PetscInt_FMT " %" PetscInt_FMT " %g\n", SLICE_HEIGHT * i + row, a->colidx[j], (double)PetscRealPart(a->val[j])));
117468aafef3SStefano Zampini         }
117568aafef3SStefano Zampini #else
1176*2d1451d4SHong Zhang         PetscCall(PetscViewerASCIIPrintf(viewer, "  %" PetscInt_FMT " %" PetscInt_FMT " %g\n", SLICE_HEIGHT * i + row, a->colidx[j], (double)a->val[j]));
117768aafef3SStefano Zampini #endif
117868aafef3SStefano Zampini       }
117968aafef3SStefano Zampini     }
1180d4002b98SHong Zhang   } else {
11819566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_FALSE));
1182d4002b98SHong Zhang     if (A->factortype) {
1183d4002b98SHong Zhang       for (i = 0; i < m; i++) {
1184*2d1451d4SHong Zhang         shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
11859566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "row %" PetscInt_FMT ":", i));
1186d4002b98SHong Zhang         /* L part */
1187*2d1451d4SHong Zhang         for (j = shift; j < a->diag[i]; j += SLICE_HEIGHT) {
1188d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1189*2d1451d4SHong Zhang           if (PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j]) > 0.0) {
11909566063dSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g + %g i)", a->colidx[j], (double)PetscRealPart(a->val[j]), (double)PetscImaginaryPart(a->val[j])));
1191*2d1451d4SHong Zhang           } else if (PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j]) < 0.0) {
11929566063dSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g - %g i)", a->colidx[j], (double)PetscRealPart(a->val[j]), (double)(-PetscImaginaryPart(a->val[j]))));
1193d4002b98SHong Zhang           } else {
11949566063dSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[j], (double)PetscRealPart(a->val[j])));
1195d4002b98SHong Zhang           }
1196d4002b98SHong Zhang #else
11979566063dSJacob Faibussowitsch           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[j], (double)a->val[j]));
1198d4002b98SHong Zhang #endif
1199d4002b98SHong Zhang         }
1200d4002b98SHong Zhang         /* diagonal */
1201d4002b98SHong Zhang         j = a->diag[i];
1202d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1203d4002b98SHong Zhang         if (PetscImaginaryPart(a->val[j]) > 0.0) {
12049566063dSJacob Faibussowitsch           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g + %g i)", a->colidx[j], (double)PetscRealPart(1.0 / a->val[j]), (double)PetscImaginaryPart(1.0 / a->val[j])));
1205d4002b98SHong Zhang         } else if (PetscImaginaryPart(a->val[j]) < 0.0) {
12069566063dSJacob Faibussowitsch           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g - %g i)", a->colidx[j], (double)PetscRealPart(1.0 / a->val[j]), (double)(-PetscImaginaryPart(1.0 / a->val[j]))));
1207d4002b98SHong Zhang         } else {
12089566063dSJacob Faibussowitsch           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[j], (double)PetscRealPart(1.0 / a->val[j])));
1209d4002b98SHong Zhang         }
1210d4002b98SHong Zhang #else
12119566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[j], (double)(1.0 / a->val[j])));
1212d4002b98SHong Zhang #endif
1213d4002b98SHong Zhang 
1214d4002b98SHong Zhang         /* U part */
1215*2d1451d4SHong Zhang         for (j = a->diag[i] + 1; j < shift + SLICE_HEIGHT * a->rlen[i]; j += SLICE_HEIGHT) {
1216d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1217d4002b98SHong Zhang           if (PetscImaginaryPart(a->val[j]) > 0.0) {
12189566063dSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g + %g i)", a->colidx[j], (double)PetscRealPart(a->val[j]), (double)PetscImaginaryPart(a->val[j])));
1219d4002b98SHong Zhang           } else if (PetscImaginaryPart(a->val[j]) < 0.0) {
12209566063dSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g - %g i)", a->colidx[j], (double)PetscRealPart(a->val[j]), (double)(-PetscImaginaryPart(a->val[j]))));
1221d4002b98SHong Zhang           } else {
12229566063dSJacob Faibussowitsch             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[j], (double)PetscRealPart(a->val[j])));
1223d4002b98SHong Zhang           }
1224d4002b98SHong Zhang #else
12259566063dSJacob Faibussowitsch           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[j], (double)a->val[j]));
1226d4002b98SHong Zhang #endif
1227d4002b98SHong Zhang         }
12289566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "\n"));
1229d4002b98SHong Zhang       }
1230d4002b98SHong Zhang     } else {
1231d4002b98SHong Zhang       for (i = 0; i < m; i++) {
1232*2d1451d4SHong Zhang         shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
12339566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "row %" PetscInt_FMT ":", i));
1234d4002b98SHong Zhang         for (j = 0; j < a->rlen[i]; j++) {
1235d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
1236d4002b98SHong Zhang           if (PetscImaginaryPart(a->val[j]) > 0.0) {
1237*2d1451d4SHong Zhang             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g + %g i)", a->colidx[shift + SLICE_HEIGHT * j], (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j]), (double)PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j])));
1238d4002b98SHong Zhang           } else if (PetscImaginaryPart(a->val[j]) < 0.0) {
1239*2d1451d4SHong Zhang             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g - %g i)", a->colidx[shift + SLICE_HEIGHT * j], (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j]), (double)-PetscImaginaryPart(a->val[shift + SLICE_HEIGHT * j])));
1240d4002b98SHong Zhang           } else {
1241*2d1451d4SHong Zhang             PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[shift + SLICE_HEIGHT * j], (double)PetscRealPart(a->val[shift + SLICE_HEIGHT * j])));
1242d4002b98SHong Zhang           }
1243d4002b98SHong Zhang #else
1244*2d1451d4SHong Zhang           PetscCall(PetscViewerASCIIPrintf(viewer, " (%" PetscInt_FMT ", %g) ", a->colidx[shift + SLICE_HEIGHT * j], (double)a->val[shift + SLICE_HEIGHT * j]));
1245d4002b98SHong Zhang #endif
1246d4002b98SHong Zhang         }
12479566063dSJacob Faibussowitsch         PetscCall(PetscViewerASCIIPrintf(viewer, "\n"));
1248d4002b98SHong Zhang       }
1249d4002b98SHong Zhang     }
12509566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIUseTabs(viewer, PETSC_TRUE));
1251d4002b98SHong Zhang   }
12529566063dSJacob Faibussowitsch   PetscCall(PetscViewerFlush(viewer));
12533ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1254d4002b98SHong Zhang }
1255d4002b98SHong Zhang 
1256d4002b98SHong Zhang #include <petscdraw.h>
1257d71ae5a4SJacob Faibussowitsch PetscErrorCode MatView_SeqSELL_Draw_Zoom(PetscDraw draw, void *Aa)
1258d71ae5a4SJacob Faibussowitsch {
1259d4002b98SHong Zhang   Mat               A = (Mat)Aa;
1260d4002b98SHong Zhang   Mat_SeqSELL      *a = (Mat_SeqSELL *)A->data;
1261d4002b98SHong Zhang   PetscInt          i, j, m = A->rmap->n, shift;
1262d4002b98SHong Zhang   int               color;
1263d4002b98SHong Zhang   PetscReal         xl, yl, xr, yr, x_l, x_r, y_l, y_r;
1264d4002b98SHong Zhang   PetscViewer       viewer;
1265d4002b98SHong Zhang   PetscViewerFormat format;
1266d4002b98SHong Zhang 
1267d4002b98SHong Zhang   PetscFunctionBegin;
12689566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)A, "Zoomviewer", (PetscObject *)&viewer));
12699566063dSJacob Faibussowitsch   PetscCall(PetscViewerGetFormat(viewer, &format));
12709566063dSJacob Faibussowitsch   PetscCall(PetscDrawGetCoordinates(draw, &xl, &yl, &xr, &yr));
1271d4002b98SHong Zhang 
1272d4002b98SHong Zhang   /* loop over matrix elements drawing boxes */
1273d4002b98SHong Zhang 
1274d4002b98SHong Zhang   if (format != PETSC_VIEWER_DRAW_CONTOUR) {
1275d0609cedSBarry Smith     PetscDrawCollectiveBegin(draw);
1276d4002b98SHong Zhang     /* Blue for negative, Cyan for zero and  Red for positive */
1277d4002b98SHong Zhang     color = PETSC_DRAW_BLUE;
1278d4002b98SHong Zhang     for (i = 0; i < m; i++) {
1279*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT; /* starting index of the row i */
12809371c9d4SSatish Balay       y_l   = m - i - 1.0;
12819371c9d4SSatish Balay       y_r   = y_l + 1.0;
1282d4002b98SHong Zhang       for (j = 0; j < a->rlen[i]; j++) {
1283*2d1451d4SHong Zhang         x_l = a->colidx[shift + SLICE_HEIGHT * j];
12849371c9d4SSatish Balay         x_r = x_l + 1.0;
1285*2d1451d4SHong Zhang         if (PetscRealPart(a->val[shift + SLICE_HEIGHT * j]) >= 0.) continue;
12869566063dSJacob Faibussowitsch         PetscCall(PetscDrawRectangle(draw, x_l, y_l, x_r, y_r, color, color, color, color));
1287d4002b98SHong Zhang       }
1288d4002b98SHong Zhang     }
1289d4002b98SHong Zhang     color = PETSC_DRAW_CYAN;
1290d4002b98SHong Zhang     for (i = 0; i < m; i++) {
1291*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
12929371c9d4SSatish Balay       y_l   = m - i - 1.0;
12939371c9d4SSatish Balay       y_r   = y_l + 1.0;
1294d4002b98SHong Zhang       for (j = 0; j < a->rlen[i]; j++) {
1295*2d1451d4SHong Zhang         x_l = a->colidx[shift + SLICE_HEIGHT * j];
12969371c9d4SSatish Balay         x_r = x_l + 1.0;
1297*2d1451d4SHong Zhang         if (a->val[shift + SLICE_HEIGHT * j] != 0.) continue;
12989566063dSJacob Faibussowitsch         PetscCall(PetscDrawRectangle(draw, x_l, y_l, x_r, y_r, color, color, color, color));
1299d4002b98SHong Zhang       }
1300d4002b98SHong Zhang     }
1301d4002b98SHong Zhang     color = PETSC_DRAW_RED;
1302d4002b98SHong Zhang     for (i = 0; i < m; i++) {
1303*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
13049371c9d4SSatish Balay       y_l   = m - i - 1.0;
13059371c9d4SSatish Balay       y_r   = y_l + 1.0;
1306d4002b98SHong Zhang       for (j = 0; j < a->rlen[i]; j++) {
1307*2d1451d4SHong Zhang         x_l = a->colidx[shift + SLICE_HEIGHT * j];
13089371c9d4SSatish Balay         x_r = x_l + 1.0;
1309*2d1451d4SHong Zhang         if (PetscRealPart(a->val[shift + SLICE_HEIGHT * j]) <= 0.) continue;
13109566063dSJacob Faibussowitsch         PetscCall(PetscDrawRectangle(draw, x_l, y_l, x_r, y_r, color, color, color, color));
1311d4002b98SHong Zhang       }
1312d4002b98SHong Zhang     }
1313d0609cedSBarry Smith     PetscDrawCollectiveEnd(draw);
1314d4002b98SHong Zhang   } else {
1315d4002b98SHong Zhang     /* use contour shading to indicate magnitude of values */
1316d4002b98SHong Zhang     /* first determine max of all nonzero values */
1317d4002b98SHong Zhang     PetscReal minv = 0.0, maxv = 0.0;
1318d4002b98SHong Zhang     PetscInt  count = 0;
1319d4002b98SHong Zhang     PetscDraw popup;
1320d4002b98SHong Zhang     for (i = 0; i < a->sliidx[a->totalslices]; i++) {
1321d4002b98SHong Zhang       if (PetscAbsScalar(a->val[i]) > maxv) maxv = PetscAbsScalar(a->val[i]);
1322d4002b98SHong Zhang     }
1323d4002b98SHong Zhang     if (minv >= maxv) maxv = minv + PETSC_SMALL;
13249566063dSJacob Faibussowitsch     PetscCall(PetscDrawGetPopup(draw, &popup));
13259566063dSJacob Faibussowitsch     PetscCall(PetscDrawScalePopup(popup, minv, maxv));
1326d4002b98SHong Zhang 
1327d0609cedSBarry Smith     PetscDrawCollectiveBegin(draw);
1328d4002b98SHong Zhang     for (i = 0; i < m; i++) {
1329*2d1451d4SHong Zhang       shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT;
1330d4002b98SHong Zhang       y_l   = m - i - 1.0;
1331d4002b98SHong Zhang       y_r   = y_l + 1.0;
1332d4002b98SHong Zhang       for (j = 0; j < a->rlen[i]; j++) {
1333*2d1451d4SHong Zhang         x_l   = a->colidx[shift + SLICE_HEIGHT * j];
1334d4002b98SHong Zhang         x_r   = x_l + 1.0;
1335d4002b98SHong Zhang         color = PetscDrawRealToColor(PetscAbsScalar(a->val[count]), minv, maxv);
13369566063dSJacob Faibussowitsch         PetscCall(PetscDrawRectangle(draw, x_l, y_l, x_r, y_r, color, color, color, color));
1337d4002b98SHong Zhang         count++;
1338d4002b98SHong Zhang       }
1339d4002b98SHong Zhang     }
1340d0609cedSBarry Smith     PetscDrawCollectiveEnd(draw);
1341d4002b98SHong Zhang   }
13423ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1343d4002b98SHong Zhang }
1344d4002b98SHong Zhang 
1345d4002b98SHong Zhang #include <petscdraw.h>
1346d71ae5a4SJacob Faibussowitsch PetscErrorCode MatView_SeqSELL_Draw(Mat A, PetscViewer viewer)
1347d71ae5a4SJacob Faibussowitsch {
1348d4002b98SHong Zhang   PetscDraw draw;
1349d4002b98SHong Zhang   PetscReal xr, yr, xl, yl, h, w;
1350d4002b98SHong Zhang   PetscBool isnull;
1351d4002b98SHong Zhang 
1352d4002b98SHong Zhang   PetscFunctionBegin;
13539566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
13549566063dSJacob Faibussowitsch   PetscCall(PetscDrawIsNull(draw, &isnull));
13553ba16761SJacob Faibussowitsch   if (isnull) PetscFunctionReturn(PETSC_SUCCESS);
1356d4002b98SHong Zhang 
13579371c9d4SSatish Balay   xr = A->cmap->n;
13589371c9d4SSatish Balay   yr = A->rmap->n;
13599371c9d4SSatish Balay   h  = yr / 10.0;
13609371c9d4SSatish Balay   w  = xr / 10.0;
13619371c9d4SSatish Balay   xr += w;
13629371c9d4SSatish Balay   yr += h;
13639371c9d4SSatish Balay   xl = -w;
13649371c9d4SSatish Balay   yl = -h;
13659566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetCoordinates(draw, xl, yl, xr, yr));
13669566063dSJacob Faibussowitsch   PetscCall(PetscObjectCompose((PetscObject)A, "Zoomviewer", (PetscObject)viewer));
13679566063dSJacob Faibussowitsch   PetscCall(PetscDrawZoom(draw, MatView_SeqSELL_Draw_Zoom, A));
13689566063dSJacob Faibussowitsch   PetscCall(PetscObjectCompose((PetscObject)A, "Zoomviewer", NULL));
13699566063dSJacob Faibussowitsch   PetscCall(PetscDrawSave(draw));
13703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1371d4002b98SHong Zhang }
1372d4002b98SHong Zhang 
1373d71ae5a4SJacob Faibussowitsch PetscErrorCode MatView_SeqSELL(Mat A, PetscViewer viewer)
1374d71ae5a4SJacob Faibussowitsch {
1375d4002b98SHong Zhang   PetscBool iascii, isbinary, isdraw;
1376d4002b98SHong Zhang 
1377d4002b98SHong Zhang   PetscFunctionBegin;
13789566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
13799566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
13809566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
1381d4002b98SHong Zhang   if (iascii) {
13829566063dSJacob Faibussowitsch     PetscCall(MatView_SeqSELL_ASCII(A, viewer));
1383d4002b98SHong Zhang   } else if (isbinary) {
13849566063dSJacob Faibussowitsch     /* PetscCall(MatView_SeqSELL_Binary(A,viewer)); */
13851baa6e33SBarry Smith   } else if (isdraw) PetscCall(MatView_SeqSELL_Draw(A, viewer));
13863ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1387d4002b98SHong Zhang }
1388d4002b98SHong Zhang 
1389d71ae5a4SJacob Faibussowitsch PetscErrorCode MatAssemblyEnd_SeqSELL(Mat A, MatAssemblyType mode)
1390d71ae5a4SJacob Faibussowitsch {
1391d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1392d4002b98SHong Zhang   PetscInt     i, shift, row_in_slice, row, nrow, *cp, lastcol, j, k;
1393d4002b98SHong Zhang   MatScalar   *vp;
1394d4002b98SHong Zhang 
1395d4002b98SHong Zhang   PetscFunctionBegin;
13963ba16761SJacob Faibussowitsch   if (mode == MAT_FLUSH_ASSEMBLY) PetscFunctionReturn(PETSC_SUCCESS);
1397d4002b98SHong Zhang   /* To do: compress out the unused elements */
13989566063dSJacob Faibussowitsch   PetscCall(MatMarkDiagonal_SeqSELL(A));
13999566063dSJacob Faibussowitsch   PetscCall(PetscInfo(A, "Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: %" PetscInt_FMT " allocated %" PetscInt_FMT " used (%" PetscInt_FMT " nonzeros+%" PetscInt_FMT " paddedzeros)\n", A->rmap->n, A->cmap->n, a->maxallocmat, a->sliidx[a->totalslices], a->nz, a->sliidx[a->totalslices] - a->nz));
14009566063dSJacob Faibussowitsch   PetscCall(PetscInfo(A, "Number of mallocs during MatSetValues() is %" PetscInt_FMT "\n", a->reallocs));
14019566063dSJacob Faibussowitsch   PetscCall(PetscInfo(A, "Maximum nonzeros in any row is %" PetscInt_FMT "\n", a->rlenmax));
1402*2d1451d4SHong Zhang   a->nonzerorowcnt = 0;
1403d4002b98SHong Zhang   /* Set unused slots for column indices to last valid column index. Set unused slots for values to zero. This allows for a use of unmasked intrinsics -> higher performance */
1404d4002b98SHong Zhang   for (i = 0; i < a->totalslices; ++i) {
1405d4002b98SHong Zhang     shift = a->sliidx[i];                                                 /* starting index of the slice */
1406d4002b98SHong Zhang     cp    = a->colidx + shift;                                            /* pointer to the column indices of the slice */
1407d4002b98SHong Zhang     vp    = a->val + shift;                                               /* pointer to the nonzero values of the slice */
1408*2d1451d4SHong Zhang     for (row_in_slice = 0; row_in_slice < SLICE_HEIGHT; ++row_in_slice) { /* loop over rows in the slice */
1409*2d1451d4SHong Zhang       row  = SLICE_HEIGHT * i + row_in_slice;
1410d4002b98SHong Zhang       nrow = a->rlen[row]; /* number of nonzeros in row */
1411d4002b98SHong Zhang       /*
1412d4002b98SHong Zhang         Search for the nearest nonzero. Normally setting the index to zero may cause extra communication.
1413d4002b98SHong Zhang         But if the entire slice are empty, it is fine to use 0 since the index will not be loaded.
1414d4002b98SHong Zhang       */
1415d4002b98SHong Zhang       lastcol = 0;
1416d4002b98SHong Zhang       if (nrow > 0) { /* nonempty row */
1417*2d1451d4SHong Zhang         a->nonzerorowcnt++;
1418*2d1451d4SHong Zhang         lastcol = cp[SLICE_HEIGHT * (nrow - 1) + row_in_slice]; /* use the index from the last nonzero at current row */
1419aaa8cc7dSPierre Jolivet       } else if (!row_in_slice) {                               /* first row of the correct slice is empty */
1420*2d1451d4SHong Zhang         for (j = 1; j < SLICE_HEIGHT; j++) {
1421*2d1451d4SHong Zhang           if (a->rlen[SLICE_HEIGHT * i + j]) {
1422d4002b98SHong Zhang             lastcol = cp[j];
1423d4002b98SHong Zhang             break;
1424d4002b98SHong Zhang           }
1425d4002b98SHong Zhang         }
1426d4002b98SHong Zhang       } else {
1427d4002b98SHong Zhang         if (a->sliidx[i + 1] != shift) lastcol = cp[row_in_slice - 1]; /* use the index from the previous row */
1428d4002b98SHong Zhang       }
1429d4002b98SHong Zhang 
1430*2d1451d4SHong Zhang       for (k = nrow; k < (a->sliidx[i + 1] - shift) / SLICE_HEIGHT; ++k) {
1431*2d1451d4SHong Zhang         cp[SLICE_HEIGHT * k + row_in_slice] = lastcol;
1432*2d1451d4SHong Zhang         vp[SLICE_HEIGHT * k + row_in_slice] = (MatScalar)0;
1433d4002b98SHong Zhang       }
1434d4002b98SHong Zhang     }
1435d4002b98SHong Zhang   }
1436d4002b98SHong Zhang 
1437d4002b98SHong Zhang   A->info.mallocs += a->reallocs;
1438d4002b98SHong Zhang   a->reallocs = 0;
1439d4002b98SHong Zhang 
14409566063dSJacob Faibussowitsch   PetscCall(MatSeqSELLInvalidateDiagonal(A));
14413ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1442d4002b98SHong Zhang }
1443d4002b98SHong Zhang 
1444d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetInfo_SeqSELL(Mat A, MatInfoType flag, MatInfo *info)
1445d71ae5a4SJacob Faibussowitsch {
1446d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1447d4002b98SHong Zhang 
1448d4002b98SHong Zhang   PetscFunctionBegin;
1449d4002b98SHong Zhang   info->block_size   = 1.0;
14503966268fSBarry Smith   info->nz_allocated = a->maxallocmat;
14513966268fSBarry Smith   info->nz_used      = a->sliidx[a->totalslices]; /* include padding zeros */
14523966268fSBarry Smith   info->nz_unneeded  = (a->maxallocmat - a->sliidx[a->totalslices]);
14533966268fSBarry Smith   info->assemblies   = A->num_ass;
14543966268fSBarry Smith   info->mallocs      = A->info.mallocs;
14554dfa11a4SJacob Faibussowitsch   info->memory       = 0; /* REVIEW ME */
1456d4002b98SHong Zhang   if (A->factortype) {
1457d4002b98SHong Zhang     info->fill_ratio_given  = A->info.fill_ratio_given;
1458d4002b98SHong Zhang     info->fill_ratio_needed = A->info.fill_ratio_needed;
1459d4002b98SHong Zhang     info->factor_mallocs    = A->info.factor_mallocs;
1460d4002b98SHong Zhang   } else {
1461d4002b98SHong Zhang     info->fill_ratio_given  = 0;
1462d4002b98SHong Zhang     info->fill_ratio_needed = 0;
1463d4002b98SHong Zhang     info->factor_mallocs    = 0;
1464d4002b98SHong Zhang   }
14653ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1466d4002b98SHong Zhang }
1467d4002b98SHong Zhang 
1468d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetValues_SeqSELL(Mat A, PetscInt m, const PetscInt im[], PetscInt n, const PetscInt in[], const PetscScalar v[], InsertMode is)
1469d71ae5a4SJacob Faibussowitsch {
1470d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1471d4002b98SHong Zhang   PetscInt     shift, i, k, l, low, high, t, ii, row, col, nrow;
1472d4002b98SHong Zhang   PetscInt    *cp, nonew = a->nonew, lastcol = -1;
1473d4002b98SHong Zhang   MatScalar   *vp, value;
1474*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1475*2d1451d4SHong Zhang   PetscBool inserted = PETSC_FALSE;
1476*2d1451d4SHong Zhang #endif
1477d4002b98SHong Zhang 
1478d4002b98SHong Zhang   PetscFunctionBegin;
1479d4002b98SHong Zhang   for (k = 0; k < m; k++) { /* loop over added rows */
1480d4002b98SHong Zhang     row = im[k];
1481d4002b98SHong Zhang     if (row < 0) continue;
14826bdcaf15SBarry Smith     PetscCheck(row < A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large: row %" PetscInt_FMT " max %" PetscInt_FMT, row, A->rmap->n - 1);
1483*2d1451d4SHong Zhang     shift = a->sliidx[row / SLICE_HEIGHT] + row % SLICE_HEIGHT; /* starting index of the row */
1484d4002b98SHong Zhang     cp    = a->colidx + shift;                                  /* pointer to the row */
1485d4002b98SHong Zhang     vp    = a->val + shift;                                     /* pointer to the row */
1486d4002b98SHong Zhang     nrow  = a->rlen[row];
1487d4002b98SHong Zhang     low   = 0;
1488d4002b98SHong Zhang     high  = nrow;
1489d4002b98SHong Zhang 
1490d4002b98SHong Zhang     for (l = 0; l < n; l++) { /* loop over added columns */
1491d4002b98SHong Zhang       col = in[l];
1492d4002b98SHong Zhang       if (col < 0) continue;
14936bdcaf15SBarry Smith       PetscCheck(col < A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Col too large: row %" PetscInt_FMT " max %" PetscInt_FMT, col, A->cmap->n - 1);
1494d4002b98SHong Zhang       if (a->roworiented) {
1495d4002b98SHong Zhang         value = v[l + k * n];
1496d4002b98SHong Zhang       } else {
1497d4002b98SHong Zhang         value = v[k + l * m];
1498d4002b98SHong Zhang       }
1499d4002b98SHong Zhang       if ((value == 0.0 && a->ignorezeroentries) && (is == ADD_VALUES)) continue;
1500d4002b98SHong Zhang 
1501ed73aabaSBarry Smith       /* search in this row for the specified column, i indicates the column to be set */
1502d4002b98SHong Zhang       if (col <= lastcol) low = 0;
1503d4002b98SHong Zhang       else high = nrow;
1504d4002b98SHong Zhang       lastcol = col;
1505d4002b98SHong Zhang       while (high - low > 5) {
1506d4002b98SHong Zhang         t = (low + high) / 2;
1507*2d1451d4SHong Zhang         if (*(cp + SLICE_HEIGHT * t) > col) high = t;
1508d4002b98SHong Zhang         else low = t;
1509d4002b98SHong Zhang       }
1510d4002b98SHong Zhang       for (i = low; i < high; i++) {
1511*2d1451d4SHong Zhang         if (*(cp + SLICE_HEIGHT * i) > col) break;
1512*2d1451d4SHong Zhang         if (*(cp + SLICE_HEIGHT * i) == col) {
1513*2d1451d4SHong Zhang           if (is == ADD_VALUES) *(vp + SLICE_HEIGHT * i) += value;
1514*2d1451d4SHong Zhang           else *(vp + SLICE_HEIGHT * i) = value;
1515*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1516*2d1451d4SHong Zhang           inserted = PETSC_TRUE;
1517*2d1451d4SHong Zhang #endif
1518d4002b98SHong Zhang           low = i + 1;
1519d4002b98SHong Zhang           goto noinsert;
1520d4002b98SHong Zhang         }
1521d4002b98SHong Zhang       }
1522d4002b98SHong Zhang       if (value == 0.0 && a->ignorezeroentries) goto noinsert;
1523d4002b98SHong Zhang       if (nonew == 1) goto noinsert;
152408401ef6SPierre Jolivet       PetscCheck(nonew != -1, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Inserting a new nonzero (%" PetscInt_FMT ", %" PetscInt_FMT ") in the matrix", row, col);
1525d4002b98SHong Zhang       /* If the current row length exceeds the slice width (e.g. nrow==slice_width), allocate a new space, otherwise do nothing */
1526*2d1451d4SHong Zhang       MatSeqXSELLReallocateSELL(A, A->rmap->n, 1, nrow, a->sliidx, row / SLICE_HEIGHT, row, col, a->colidx, a->val, cp, vp, nonew, MatScalar);
1527d4002b98SHong Zhang       /* add the new nonzero to the high position, shift the remaining elements in current row to the right by one slot */
1528d4002b98SHong Zhang       for (ii = nrow - 1; ii >= i; ii--) {
1529*2d1451d4SHong Zhang         *(cp + SLICE_HEIGHT * (ii + 1)) = *(cp + SLICE_HEIGHT * ii);
1530*2d1451d4SHong Zhang         *(vp + SLICE_HEIGHT * (ii + 1)) = *(vp + SLICE_HEIGHT * ii);
1531d4002b98SHong Zhang       }
1532d4002b98SHong Zhang       a->rlen[row]++;
1533*2d1451d4SHong Zhang       *(cp + SLICE_HEIGHT * i) = col;
1534*2d1451d4SHong Zhang       *(vp + SLICE_HEIGHT * i) = value;
1535d4002b98SHong Zhang       a->nz++;
1536d4002b98SHong Zhang       A->nonzerostate++;
1537*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1538*2d1451d4SHong Zhang       inserted = PETSC_TRUE;
1539*2d1451d4SHong Zhang #endif
15409371c9d4SSatish Balay       low = i + 1;
15419371c9d4SSatish Balay       high++;
15429371c9d4SSatish Balay       nrow++;
1543d4002b98SHong Zhang     noinsert:;
1544d4002b98SHong Zhang     }
1545d4002b98SHong Zhang     a->rlen[row] = nrow;
1546d4002b98SHong Zhang   }
1547*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1548*2d1451d4SHong Zhang   if (A->offloadmask != PETSC_OFFLOAD_UNALLOCATED && inserted) A->offloadmask = PETSC_OFFLOAD_CPU;
1549*2d1451d4SHong Zhang #endif
15503ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1551d4002b98SHong Zhang }
1552d4002b98SHong Zhang 
1553d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCopy_SeqSELL(Mat A, Mat B, MatStructure str)
1554d71ae5a4SJacob Faibussowitsch {
1555d4002b98SHong Zhang   PetscFunctionBegin;
1556d4002b98SHong Zhang   /* If the two matrices have the same copy implementation, use fast copy. */
1557d4002b98SHong Zhang   if (str == SAME_NONZERO_PATTERN && (A->ops->copy == B->ops->copy)) {
1558d4002b98SHong Zhang     Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1559d4002b98SHong Zhang     Mat_SeqSELL *b = (Mat_SeqSELL *)B->data;
1560d4002b98SHong Zhang 
156108401ef6SPierre Jolivet     PetscCheck(a->sliidx[a->totalslices] == b->sliidx[b->totalslices], PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Number of nonzeros in two matrices are different");
15629566063dSJacob Faibussowitsch     PetscCall(PetscArraycpy(b->val, a->val, a->sliidx[a->totalslices]));
1563d4002b98SHong Zhang   } else {
15649566063dSJacob Faibussowitsch     PetscCall(MatCopy_Basic(A, B, str));
1565d4002b98SHong Zhang   }
15663ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1567d4002b98SHong Zhang }
1568d4002b98SHong Zhang 
1569d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSetUp_SeqSELL(Mat A)
1570d71ae5a4SJacob Faibussowitsch {
1571d4002b98SHong Zhang   PetscFunctionBegin;
15729566063dSJacob Faibussowitsch   PetscCall(MatSeqSELLSetPreallocation(A, PETSC_DEFAULT, NULL));
15733ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1574d4002b98SHong Zhang }
1575d4002b98SHong Zhang 
1576d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqSELLGetArray_SeqSELL(Mat A, PetscScalar *array[])
1577d71ae5a4SJacob Faibussowitsch {
1578d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1579d4002b98SHong Zhang 
1580d4002b98SHong Zhang   PetscFunctionBegin;
1581d4002b98SHong Zhang   *array = a->val;
15823ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1583d4002b98SHong Zhang }
1584d4002b98SHong Zhang 
1585d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqSELLRestoreArray_SeqSELL(Mat A, PetscScalar *array[])
1586d71ae5a4SJacob Faibussowitsch {
1587d4002b98SHong Zhang   PetscFunctionBegin;
15883ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1589d4002b98SHong Zhang }
1590d4002b98SHong Zhang 
1591d71ae5a4SJacob Faibussowitsch PetscErrorCode MatRealPart_SeqSELL(Mat A)
1592d71ae5a4SJacob Faibussowitsch {
1593d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1594d4002b98SHong Zhang   PetscInt     i;
1595d4002b98SHong Zhang   MatScalar   *aval = a->val;
1596d4002b98SHong Zhang 
1597d4002b98SHong Zhang   PetscFunctionBegin;
1598d4002b98SHong Zhang   for (i = 0; i < a->sliidx[a->totalslices]; i++) aval[i] = PetscRealPart(aval[i]);
1599*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1600*2d1451d4SHong Zhang   if (A->offloadmask != PETSC_OFFLOAD_UNALLOCATED) A->offloadmask = PETSC_OFFLOAD_CPU;
1601*2d1451d4SHong Zhang #endif
16023ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1603d4002b98SHong Zhang }
1604d4002b98SHong Zhang 
1605d71ae5a4SJacob Faibussowitsch PetscErrorCode MatImaginaryPart_SeqSELL(Mat A)
1606d71ae5a4SJacob Faibussowitsch {
1607d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
1608d4002b98SHong Zhang   PetscInt     i;
1609d4002b98SHong Zhang   MatScalar   *aval = a->val;
1610d4002b98SHong Zhang 
1611d4002b98SHong Zhang   PetscFunctionBegin;
1612d4002b98SHong Zhang   for (i = 0; i < a->sliidx[a->totalslices]; i++) aval[i] = PetscImaginaryPart(aval[i]);
16139566063dSJacob Faibussowitsch   PetscCall(MatSeqSELLInvalidateDiagonal(A));
1614*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1615*2d1451d4SHong Zhang   if (A->offloadmask != PETSC_OFFLOAD_UNALLOCATED) A->offloadmask = PETSC_OFFLOAD_CPU;
1616*2d1451d4SHong Zhang #endif
16173ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1618d4002b98SHong Zhang }
1619d4002b98SHong Zhang 
1620d71ae5a4SJacob Faibussowitsch PetscErrorCode MatScale_SeqSELL(Mat inA, PetscScalar alpha)
1621d71ae5a4SJacob Faibussowitsch {
1622d4002b98SHong Zhang   Mat_SeqSELL *a      = (Mat_SeqSELL *)inA->data;
1623d4002b98SHong Zhang   MatScalar   *aval   = a->val;
1624d4002b98SHong Zhang   PetscScalar  oalpha = alpha;
1625d4002b98SHong Zhang   PetscBLASInt one    = 1, size;
1626d4002b98SHong Zhang 
1627d4002b98SHong Zhang   PetscFunctionBegin;
16289566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(a->sliidx[a->totalslices], &size));
1629792fecdfSBarry Smith   PetscCallBLAS("BLASscal", BLASscal_(&size, &oalpha, aval, &one));
16309566063dSJacob Faibussowitsch   PetscCall(PetscLogFlops(a->nz));
16319566063dSJacob Faibussowitsch   PetscCall(MatSeqSELLInvalidateDiagonal(inA));
1632*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1633*2d1451d4SHong Zhang   if (inA->offloadmask != PETSC_OFFLOAD_UNALLOCATED) inA->offloadmask = PETSC_OFFLOAD_CPU;
1634*2d1451d4SHong Zhang #endif
16353ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1636d4002b98SHong Zhang }
1637d4002b98SHong Zhang 
1638d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_SeqSELL(Mat Y, PetscScalar a)
1639d71ae5a4SJacob Faibussowitsch {
1640d4002b98SHong Zhang   Mat_SeqSELL *y = (Mat_SeqSELL *)Y->data;
1641d4002b98SHong Zhang 
1642d4002b98SHong Zhang   PetscFunctionBegin;
164348a46eb9SPierre Jolivet   if (!Y->preallocated || !y->nz) PetscCall(MatSeqSELLSetPreallocation(Y, 1, NULL));
16449566063dSJacob Faibussowitsch   PetscCall(MatShift_Basic(Y, a));
16453ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1646d4002b98SHong Zhang }
1647d4002b98SHong Zhang 
1648d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSOR_SeqSELL(Mat A, Vec bb, PetscReal omega, MatSORType flag, PetscReal fshift, PetscInt its, PetscInt lits, Vec xx)
1649d71ae5a4SJacob Faibussowitsch {
1650d4002b98SHong Zhang   Mat_SeqSELL       *a = (Mat_SeqSELL *)A->data;
1651d4002b98SHong Zhang   PetscScalar       *x, sum, *t;
1652f4259b30SLisandro Dalcin   const MatScalar   *idiag = NULL, *mdiag;
1653d4002b98SHong Zhang   const PetscScalar *b, *xb;
1654d4002b98SHong Zhang   PetscInt           n, m = A->rmap->n, i, j, shift;
1655d4002b98SHong Zhang   const PetscInt    *diag;
1656d4002b98SHong Zhang 
1657d4002b98SHong Zhang   PetscFunctionBegin;
1658d4002b98SHong Zhang   its = its * lits;
1659d4002b98SHong Zhang 
1660d4002b98SHong Zhang   if (fshift != a->fshift || omega != a->omega) a->idiagvalid = PETSC_FALSE; /* must recompute idiag[] */
16619566063dSJacob Faibussowitsch   if (!a->idiagvalid) PetscCall(MatInvertDiagonal_SeqSELL(A, omega, fshift));
1662d4002b98SHong Zhang   a->fshift = fshift;
1663d4002b98SHong Zhang   a->omega  = omega;
1664d4002b98SHong Zhang 
1665d4002b98SHong Zhang   diag  = a->diag;
1666d4002b98SHong Zhang   t     = a->ssor_work;
1667d4002b98SHong Zhang   idiag = a->idiag;
1668d4002b98SHong Zhang   mdiag = a->mdiag;
1669d4002b98SHong Zhang 
16709566063dSJacob Faibussowitsch   PetscCall(VecGetArray(xx, &x));
16719566063dSJacob Faibussowitsch   PetscCall(VecGetArrayRead(bb, &b));
1672d4002b98SHong Zhang   /* We count flops by assuming the upper triangular and lower triangular parts have the same number of nonzeros */
167308401ef6SPierre Jolivet   PetscCheck(flag != SOR_APPLY_UPPER, PETSC_COMM_SELF, PETSC_ERR_SUP, "SOR_APPLY_UPPER is not implemented");
167408401ef6SPierre Jolivet   PetscCheck(flag != SOR_APPLY_LOWER, PETSC_COMM_SELF, PETSC_ERR_SUP, "SOR_APPLY_LOWER is not implemented");
1675aed4548fSBarry Smith   PetscCheck(!(flag & SOR_EISENSTAT), PETSC_COMM_SELF, PETSC_ERR_SUP, "No support yet for Eisenstat");
1676d4002b98SHong Zhang 
1677d4002b98SHong Zhang   if (flag & SOR_ZERO_INITIAL_GUESS) {
1678d4002b98SHong Zhang     if ((flag & SOR_FORWARD_SWEEP) || (flag & SOR_LOCAL_FORWARD_SWEEP)) {
1679d4002b98SHong Zhang       for (i = 0; i < m; i++) {
1680*2d1451d4SHong Zhang         shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT; /* starting index of the row i */
1681d4002b98SHong Zhang         sum   = b[i];
1682*2d1451d4SHong Zhang         n     = (diag[i] - shift) / SLICE_HEIGHT;
1683*2d1451d4SHong Zhang         for (j = 0; j < n; j++) sum -= a->val[shift + SLICE_HEIGHT * j] * x[a->colidx[shift + SLICE_HEIGHT * j]];
1684d4002b98SHong Zhang         t[i] = sum;
1685d4002b98SHong Zhang         x[i] = sum * idiag[i];
1686d4002b98SHong Zhang       }
1687d4002b98SHong Zhang       xb = t;
16889566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(a->nz));
1689d4002b98SHong Zhang     } else xb = b;
1690d4002b98SHong Zhang     if ((flag & SOR_BACKWARD_SWEEP) || (flag & SOR_LOCAL_BACKWARD_SWEEP)) {
1691d4002b98SHong Zhang       for (i = m - 1; i >= 0; i--) {
1692*2d1451d4SHong Zhang         shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT; /* starting index of the row i */
1693d4002b98SHong Zhang         sum   = xb[i];
1694*2d1451d4SHong Zhang         n     = a->rlen[i] - (diag[i] - shift) / SLICE_HEIGHT - 1;
1695*2d1451d4SHong Zhang         for (j = 1; j <= n; j++) sum -= a->val[diag[i] + SLICE_HEIGHT * j] * x[a->colidx[diag[i] + SLICE_HEIGHT * j]];
1696d4002b98SHong Zhang         if (xb == b) {
1697d4002b98SHong Zhang           x[i] = sum * idiag[i];
1698d4002b98SHong Zhang         } else {
1699d4002b98SHong Zhang           x[i] = (1. - omega) * x[i] + sum * idiag[i]; /* omega in idiag */
1700d4002b98SHong Zhang         }
1701d4002b98SHong Zhang       }
17029566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(a->nz)); /* assumes 1/2 in upper */
1703d4002b98SHong Zhang     }
1704d4002b98SHong Zhang     its--;
1705d4002b98SHong Zhang   }
1706d4002b98SHong Zhang   while (its--) {
1707d4002b98SHong Zhang     if ((flag & SOR_FORWARD_SWEEP) || (flag & SOR_LOCAL_FORWARD_SWEEP)) {
1708d4002b98SHong Zhang       for (i = 0; i < m; i++) {
1709d4002b98SHong Zhang         /* lower */
1710*2d1451d4SHong Zhang         shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT; /* starting index of the row i */
1711d4002b98SHong Zhang         sum   = b[i];
1712*2d1451d4SHong Zhang         n     = (diag[i] - shift) / SLICE_HEIGHT;
1713*2d1451d4SHong Zhang         for (j = 0; j < n; j++) sum -= a->val[shift + SLICE_HEIGHT * j] * x[a->colidx[shift + SLICE_HEIGHT * j]];
1714d4002b98SHong Zhang         t[i] = sum; /* save application of the lower-triangular part */
1715d4002b98SHong Zhang         /* upper */
1716*2d1451d4SHong Zhang         n = a->rlen[i] - (diag[i] - shift) / SLICE_HEIGHT - 1;
1717*2d1451d4SHong Zhang         for (j = 1; j <= n; j++) sum -= a->val[diag[i] + SLICE_HEIGHT * j] * x[a->colidx[diag[i] + SLICE_HEIGHT * j]];
1718d4002b98SHong Zhang         x[i] = (1. - omega) * x[i] + sum * idiag[i]; /* omega in idiag */
1719d4002b98SHong Zhang       }
1720d4002b98SHong Zhang       xb = t;
17219566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(2.0 * a->nz));
1722d4002b98SHong Zhang     } else xb = b;
1723d4002b98SHong Zhang     if ((flag & SOR_BACKWARD_SWEEP) || (flag & SOR_LOCAL_BACKWARD_SWEEP)) {
1724d4002b98SHong Zhang       for (i = m - 1; i >= 0; i--) {
1725*2d1451d4SHong Zhang         shift = a->sliidx[i / SLICE_HEIGHT] + i % SLICE_HEIGHT; /* starting index of the row i */
1726d4002b98SHong Zhang         sum   = xb[i];
1727d4002b98SHong Zhang         if (xb == b) {
1728d4002b98SHong Zhang           /* whole matrix (no checkpointing available) */
1729d4002b98SHong Zhang           n = a->rlen[i];
1730*2d1451d4SHong Zhang           for (j = 0; j < n; j++) sum -= a->val[shift + SLICE_HEIGHT * j] * x[a->colidx[shift + SLICE_HEIGHT * j]];
1731d4002b98SHong Zhang           x[i] = (1. - omega) * x[i] + (sum + mdiag[i] * x[i]) * idiag[i];
1732d4002b98SHong Zhang         } else { /* lower-triangular part has been saved, so only apply upper-triangular */
1733*2d1451d4SHong Zhang           n = a->rlen[i] - (diag[i] - shift) / SLICE_HEIGHT - 1;
1734*2d1451d4SHong Zhang           for (j = 1; j <= n; j++) sum -= a->val[diag[i] + SLICE_HEIGHT * j] * x[a->colidx[diag[i] + SLICE_HEIGHT * j]];
1735d4002b98SHong Zhang           x[i] = (1. - omega) * x[i] + sum * idiag[i]; /* omega in idiag */
1736d4002b98SHong Zhang         }
1737d4002b98SHong Zhang       }
1738d4002b98SHong Zhang       if (xb == b) {
17399566063dSJacob Faibussowitsch         PetscCall(PetscLogFlops(2.0 * a->nz));
1740d4002b98SHong Zhang       } else {
17419566063dSJacob Faibussowitsch         PetscCall(PetscLogFlops(a->nz)); /* assumes 1/2 in upper */
1742d4002b98SHong Zhang       }
1743d4002b98SHong Zhang     }
1744d4002b98SHong Zhang   }
17459566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(xx, &x));
17469566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayRead(bb, &b));
17473ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1748d4002b98SHong Zhang }
1749d4002b98SHong Zhang 
1750d4002b98SHong Zhang static struct _MatOps MatOps_Values = {MatSetValues_SeqSELL,
17516108893eSStefano Zampini                                        MatGetRow_SeqSELL,
17526108893eSStefano Zampini                                        MatRestoreRow_SeqSELL,
1753d4002b98SHong Zhang                                        MatMult_SeqSELL,
1754d4002b98SHong Zhang                                        /* 4*/ MatMultAdd_SeqSELL,
1755d4002b98SHong Zhang                                        MatMultTranspose_SeqSELL,
1756d4002b98SHong Zhang                                        MatMultTransposeAdd_SeqSELL,
1757f4259b30SLisandro Dalcin                                        NULL,
1758f4259b30SLisandro Dalcin                                        NULL,
1759f4259b30SLisandro Dalcin                                        NULL,
1760f4259b30SLisandro Dalcin                                        /* 10*/ NULL,
1761f4259b30SLisandro Dalcin                                        NULL,
1762f4259b30SLisandro Dalcin                                        NULL,
1763d4002b98SHong Zhang                                        MatSOR_SeqSELL,
1764f4259b30SLisandro Dalcin                                        NULL,
1765d4002b98SHong Zhang                                        /* 15*/ MatGetInfo_SeqSELL,
1766d4002b98SHong Zhang                                        MatEqual_SeqSELL,
1767d4002b98SHong Zhang                                        MatGetDiagonal_SeqSELL,
1768d4002b98SHong Zhang                                        MatDiagonalScale_SeqSELL,
1769f4259b30SLisandro Dalcin                                        NULL,
1770f4259b30SLisandro Dalcin                                        /* 20*/ NULL,
1771d4002b98SHong Zhang                                        MatAssemblyEnd_SeqSELL,
1772d4002b98SHong Zhang                                        MatSetOption_SeqSELL,
1773d4002b98SHong Zhang                                        MatZeroEntries_SeqSELL,
1774f4259b30SLisandro Dalcin                                        /* 24*/ NULL,
1775f4259b30SLisandro Dalcin                                        NULL,
1776f4259b30SLisandro Dalcin                                        NULL,
1777f4259b30SLisandro Dalcin                                        NULL,
1778f4259b30SLisandro Dalcin                                        NULL,
1779d4002b98SHong Zhang                                        /* 29*/ MatSetUp_SeqSELL,
1780f4259b30SLisandro Dalcin                                        NULL,
1781f4259b30SLisandro Dalcin                                        NULL,
1782f4259b30SLisandro Dalcin                                        NULL,
1783f4259b30SLisandro Dalcin                                        NULL,
1784d4002b98SHong Zhang                                        /* 34*/ MatDuplicate_SeqSELL,
1785f4259b30SLisandro Dalcin                                        NULL,
1786f4259b30SLisandro Dalcin                                        NULL,
1787f4259b30SLisandro Dalcin                                        NULL,
1788f4259b30SLisandro Dalcin                                        NULL,
1789f4259b30SLisandro Dalcin                                        /* 39*/ NULL,
1790f4259b30SLisandro Dalcin                                        NULL,
1791f4259b30SLisandro Dalcin                                        NULL,
1792d4002b98SHong Zhang                                        MatGetValues_SeqSELL,
1793d4002b98SHong Zhang                                        MatCopy_SeqSELL,
1794f4259b30SLisandro Dalcin                                        /* 44*/ NULL,
1795d4002b98SHong Zhang                                        MatScale_SeqSELL,
1796d4002b98SHong Zhang                                        MatShift_SeqSELL,
1797f4259b30SLisandro Dalcin                                        NULL,
1798f4259b30SLisandro Dalcin                                        NULL,
1799f4259b30SLisandro Dalcin                                        /* 49*/ NULL,
1800f4259b30SLisandro Dalcin                                        NULL,
1801f4259b30SLisandro Dalcin                                        NULL,
1802f4259b30SLisandro Dalcin                                        NULL,
1803f4259b30SLisandro Dalcin                                        NULL,
1804d4002b98SHong Zhang                                        /* 54*/ MatFDColoringCreate_SeqXAIJ,
1805f4259b30SLisandro Dalcin                                        NULL,
1806f4259b30SLisandro Dalcin                                        NULL,
1807f4259b30SLisandro Dalcin                                        NULL,
1808f4259b30SLisandro Dalcin                                        NULL,
1809f4259b30SLisandro Dalcin                                        /* 59*/ NULL,
1810d4002b98SHong Zhang                                        MatDestroy_SeqSELL,
1811d4002b98SHong Zhang                                        MatView_SeqSELL,
1812f4259b30SLisandro Dalcin                                        NULL,
1813f4259b30SLisandro Dalcin                                        NULL,
1814f4259b30SLisandro Dalcin                                        /* 64*/ NULL,
1815f4259b30SLisandro Dalcin                                        NULL,
1816f4259b30SLisandro Dalcin                                        NULL,
1817f4259b30SLisandro Dalcin                                        NULL,
1818f4259b30SLisandro Dalcin                                        NULL,
1819f4259b30SLisandro Dalcin                                        /* 69*/ NULL,
1820f4259b30SLisandro Dalcin                                        NULL,
1821f4259b30SLisandro Dalcin                                        NULL,
1822f4259b30SLisandro Dalcin                                        NULL,
1823f4259b30SLisandro Dalcin                                        NULL,
1824f4259b30SLisandro Dalcin                                        /* 74*/ NULL,
1825d4002b98SHong Zhang                                        MatFDColoringApply_AIJ, /* reuse the FDColoring function for AIJ */
1826f4259b30SLisandro Dalcin                                        NULL,
1827f4259b30SLisandro Dalcin                                        NULL,
1828f4259b30SLisandro Dalcin                                        NULL,
1829f4259b30SLisandro Dalcin                                        /* 79*/ NULL,
1830f4259b30SLisandro Dalcin                                        NULL,
1831f4259b30SLisandro Dalcin                                        NULL,
1832f4259b30SLisandro Dalcin                                        NULL,
1833f4259b30SLisandro Dalcin                                        NULL,
1834f4259b30SLisandro Dalcin                                        /* 84*/ NULL,
1835f4259b30SLisandro Dalcin                                        NULL,
1836f4259b30SLisandro Dalcin                                        NULL,
1837f4259b30SLisandro Dalcin                                        NULL,
1838f4259b30SLisandro Dalcin                                        NULL,
1839f4259b30SLisandro Dalcin                                        /* 89*/ NULL,
1840f4259b30SLisandro Dalcin                                        NULL,
1841f4259b30SLisandro Dalcin                                        NULL,
1842f4259b30SLisandro Dalcin                                        NULL,
1843f4259b30SLisandro Dalcin                                        NULL,
1844f4259b30SLisandro Dalcin                                        /* 94*/ NULL,
1845f4259b30SLisandro Dalcin                                        NULL,
1846f4259b30SLisandro Dalcin                                        NULL,
1847f4259b30SLisandro Dalcin                                        NULL,
1848f4259b30SLisandro Dalcin                                        NULL,
1849f4259b30SLisandro Dalcin                                        /* 99*/ NULL,
1850f4259b30SLisandro Dalcin                                        NULL,
1851f4259b30SLisandro Dalcin                                        NULL,
1852d4002b98SHong Zhang                                        MatConjugate_SeqSELL,
1853f4259b30SLisandro Dalcin                                        NULL,
1854f4259b30SLisandro Dalcin                                        /*104*/ NULL,
1855f4259b30SLisandro Dalcin                                        NULL,
1856f4259b30SLisandro Dalcin                                        NULL,
1857f4259b30SLisandro Dalcin                                        NULL,
1858f4259b30SLisandro Dalcin                                        NULL,
1859f4259b30SLisandro Dalcin                                        /*109*/ NULL,
1860f4259b30SLisandro Dalcin                                        NULL,
1861f4259b30SLisandro Dalcin                                        NULL,
1862f4259b30SLisandro Dalcin                                        NULL,
1863d4002b98SHong Zhang                                        MatMissingDiagonal_SeqSELL,
1864f4259b30SLisandro Dalcin                                        /*114*/ NULL,
1865f4259b30SLisandro Dalcin                                        NULL,
1866f4259b30SLisandro Dalcin                                        NULL,
1867f4259b30SLisandro Dalcin                                        NULL,
1868f4259b30SLisandro Dalcin                                        NULL,
1869f4259b30SLisandro Dalcin                                        /*119*/ NULL,
1870f4259b30SLisandro Dalcin                                        NULL,
1871f4259b30SLisandro Dalcin                                        NULL,
1872f4259b30SLisandro Dalcin                                        NULL,
1873f4259b30SLisandro Dalcin                                        NULL,
1874f4259b30SLisandro Dalcin                                        /*124*/ NULL,
1875f4259b30SLisandro Dalcin                                        NULL,
1876f4259b30SLisandro Dalcin                                        NULL,
1877f4259b30SLisandro Dalcin                                        NULL,
1878f4259b30SLisandro Dalcin                                        NULL,
1879f4259b30SLisandro Dalcin                                        /*129*/ NULL,
1880f4259b30SLisandro Dalcin                                        NULL,
1881f4259b30SLisandro Dalcin                                        NULL,
1882f4259b30SLisandro Dalcin                                        NULL,
1883f4259b30SLisandro Dalcin                                        NULL,
1884f4259b30SLisandro Dalcin                                        /*134*/ NULL,
1885f4259b30SLisandro Dalcin                                        NULL,
1886f4259b30SLisandro Dalcin                                        NULL,
1887f4259b30SLisandro Dalcin                                        NULL,
1888f4259b30SLisandro Dalcin                                        NULL,
1889f4259b30SLisandro Dalcin                                        /*139*/ NULL,
1890f4259b30SLisandro Dalcin                                        NULL,
1891f4259b30SLisandro Dalcin                                        NULL,
1892d4002b98SHong Zhang                                        MatFDColoringSetUp_SeqXAIJ,
1893f4259b30SLisandro Dalcin                                        NULL,
1894d70f29a3SPierre Jolivet                                        /*144*/ NULL,
1895d70f29a3SPierre Jolivet                                        NULL,
1896d70f29a3SPierre Jolivet                                        NULL,
189799a7f59eSMark Adams                                        NULL,
189899a7f59eSMark Adams                                        NULL,
18997fb60732SBarry Smith                                        NULL,
1900dec0b466SHong Zhang                                        /*150*/ NULL,
1901dec0b466SHong Zhang                                        NULL};
1902d4002b98SHong Zhang 
1903d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStoreValues_SeqSELL(Mat mat)
1904d71ae5a4SJacob Faibussowitsch {
1905d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)mat->data;
1906d4002b98SHong Zhang 
1907d4002b98SHong Zhang   PetscFunctionBegin;
190828b400f6SJacob Faibussowitsch   PetscCheck(a->nonew, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Must call MatSetOption(A,MAT_NEW_NONZERO_LOCATIONS,PETSC_FALSE);first");
1909d4002b98SHong Zhang 
1910d4002b98SHong Zhang   /* allocate space for values if not already there */
1911aa624791SPierre Jolivet   if (!a->saved_values) PetscCall(PetscMalloc1(a->sliidx[a->totalslices] + 1, &a->saved_values));
1912d4002b98SHong Zhang 
1913d4002b98SHong Zhang   /* copy values over */
19149566063dSJacob Faibussowitsch   PetscCall(PetscArraycpy(a->saved_values, a->val, a->sliidx[a->totalslices]));
19153ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1916d4002b98SHong Zhang }
1917d4002b98SHong Zhang 
1918d71ae5a4SJacob Faibussowitsch PetscErrorCode MatRetrieveValues_SeqSELL(Mat mat)
1919d71ae5a4SJacob Faibussowitsch {
1920d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)mat->data;
1921d4002b98SHong Zhang 
1922d4002b98SHong Zhang   PetscFunctionBegin;
192328b400f6SJacob Faibussowitsch   PetscCheck(a->nonew, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Must call MatSetOption(A,MAT_NEW_NONZERO_LOCATIONS,PETSC_FALSE);first");
192428b400f6SJacob Faibussowitsch   PetscCheck(a->saved_values, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Must call MatStoreValues(A);first");
19259566063dSJacob Faibussowitsch   PetscCall(PetscArraycpy(a->val, a->saved_values, a->sliidx[a->totalslices]));
19263ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1927d4002b98SHong Zhang }
1928d4002b98SHong Zhang 
1929d4002b98SHong Zhang /*@C
193011a5261eSBarry Smith  MatSeqSELLRestoreArray - returns access to the array where the data for a `MATSEQSELL` matrix is stored obtained by `MatSeqSELLGetArray()`
1931d4002b98SHong Zhang 
1932d4002b98SHong Zhang  Not Collective
1933d4002b98SHong Zhang 
1934d4002b98SHong Zhang  Input Parameters:
193520f4b53cSBarry Smith +  mat - a `MATSEQSELL` matrix
193620f4b53cSBarry Smith -  array - pointer to the data
1937d4002b98SHong Zhang 
1938d4002b98SHong Zhang  Level: intermediate
1939d4002b98SHong Zhang 
194067be906fSBarry Smith  .seealso: `Mat`, `MATSEQSELL`, `MatSeqSELLGetArray()`, `MatSeqSELLRestoreArrayF90()`
1941d4002b98SHong Zhang  @*/
1942d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqSELLRestoreArray(Mat A, PetscScalar **array)
1943d71ae5a4SJacob Faibussowitsch {
1944d4002b98SHong Zhang   PetscFunctionBegin;
1945cac4c232SBarry Smith   PetscUseMethod(A, "MatSeqSELLRestoreArray_C", (Mat, PetscScalar **), (A, array));
19463ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1947d4002b98SHong Zhang }
1948d4002b98SHong Zhang 
1949*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1950*2d1451d4SHong Zhang PETSC_EXTERN PetscErrorCode MatConvert_SeqSELL_SeqSELLCUDA(Mat);
1951*2d1451d4SHong Zhang #endif
1952*2d1451d4SHong Zhang 
1953d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_SeqSELL(Mat B)
1954d71ae5a4SJacob Faibussowitsch {
1955d4002b98SHong Zhang   Mat_SeqSELL *b;
1956d4002b98SHong Zhang   PetscMPIInt  size;
1957d4002b98SHong Zhang 
1958d4002b98SHong Zhang   PetscFunctionBegin;
19599566063dSJacob Faibussowitsch   PetscCall(PetscCitationsRegister(citation, &cited));
19609566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)B), &size));
196108401ef6SPierre Jolivet   PetscCheck(size <= 1, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Comm must be of size 1");
1962d4002b98SHong Zhang 
19634dfa11a4SJacob Faibussowitsch   PetscCall(PetscNew(&b));
1964d4002b98SHong Zhang 
1965d4002b98SHong Zhang   B->data = (void *)b;
1966d4002b98SHong Zhang 
19679566063dSJacob Faibussowitsch   PetscCall(PetscMemcpy(B->ops, &MatOps_Values, sizeof(struct _MatOps)));
1968d4002b98SHong Zhang 
1969f4259b30SLisandro Dalcin   b->row                = NULL;
1970f4259b30SLisandro Dalcin   b->col                = NULL;
1971f4259b30SLisandro Dalcin   b->icol               = NULL;
1972d4002b98SHong Zhang   b->reallocs           = 0;
1973d4002b98SHong Zhang   b->ignorezeroentries  = PETSC_FALSE;
1974d4002b98SHong Zhang   b->roworiented        = PETSC_TRUE;
1975d4002b98SHong Zhang   b->nonew              = 0;
1976f4259b30SLisandro Dalcin   b->diag               = NULL;
1977f4259b30SLisandro Dalcin   b->solve_work         = NULL;
1978f4259b30SLisandro Dalcin   B->spptr              = NULL;
1979f4259b30SLisandro Dalcin   b->saved_values       = NULL;
1980f4259b30SLisandro Dalcin   b->idiag              = NULL;
1981f4259b30SLisandro Dalcin   b->mdiag              = NULL;
1982f4259b30SLisandro Dalcin   b->ssor_work          = NULL;
1983d4002b98SHong Zhang   b->omega              = 1.0;
1984d4002b98SHong Zhang   b->fshift             = 0.0;
1985d4002b98SHong Zhang   b->idiagvalid         = PETSC_FALSE;
1986d4002b98SHong Zhang   b->keepnonzeropattern = PETSC_FALSE;
1987d4002b98SHong Zhang 
19889566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATSEQSELL));
19899566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatSeqSELLGetArray_C", MatSeqSELLGetArray_SeqSELL));
19909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatSeqSELLRestoreArray_C", MatSeqSELLRestoreArray_SeqSELL));
19919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatStoreValues_C", MatStoreValues_SeqSELL));
19929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatRetrieveValues_C", MatRetrieveValues_SeqSELL));
19939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatSeqSELLSetPreallocation_C", MatSeqSELLSetPreallocation_SeqSELL));
1994*2d1451d4SHong Zhang   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_SeqSELL_SeqAIJ_C", MatConvert_SeqSELL_SeqAIJ));
1995*2d1451d4SHong Zhang #if defined(PETSC_HAVE_CUDA)
1996*2d1451d4SHong Zhang   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_SeqSELL_SeqSELLCUDA_C", MatConvert_SeqSELL_SeqSELLCUDA));
1997*2d1451d4SHong Zhang #endif
19983ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1999d4002b98SHong Zhang }
2000d4002b98SHong Zhang 
2001d4002b98SHong Zhang /*
2002d4002b98SHong Zhang  Given a matrix generated with MatGetFactor() duplicates all the information in A into B
2003d4002b98SHong Zhang  */
2004d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDuplicateNoCreate_SeqSELL(Mat C, Mat A, MatDuplicateOption cpvalues, PetscBool mallocmatspace)
2005d71ae5a4SJacob Faibussowitsch {
2006ed73aabaSBarry Smith   Mat_SeqSELL *c = (Mat_SeqSELL *)C->data, *a = (Mat_SeqSELL *)A->data;
2007d4002b98SHong Zhang   PetscInt     i, m                           = A->rmap->n;
2008d4002b98SHong Zhang   PetscInt     totalslices = a->totalslices;
2009d4002b98SHong Zhang 
2010d4002b98SHong Zhang   PetscFunctionBegin;
2011d4002b98SHong Zhang   C->factortype = A->factortype;
2012f4259b30SLisandro Dalcin   c->row        = NULL;
2013f4259b30SLisandro Dalcin   c->col        = NULL;
2014f4259b30SLisandro Dalcin   c->icol       = NULL;
2015d4002b98SHong Zhang   c->reallocs   = 0;
2016d4002b98SHong Zhang   C->assembled  = PETSC_TRUE;
2017d4002b98SHong Zhang 
20189566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->rmap, &C->rmap));
20199566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->cmap, &C->cmap));
2020d4002b98SHong Zhang 
2021*2d1451d4SHong Zhang   PetscCall(PetscMalloc1(SLICE_HEIGHT * totalslices, &c->rlen));
20229566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(totalslices + 1, &c->sliidx));
2023d4002b98SHong Zhang 
2024d4002b98SHong Zhang   for (i = 0; i < m; i++) c->rlen[i] = a->rlen[i];
2025d4002b98SHong Zhang   for (i = 0; i < totalslices + 1; i++) c->sliidx[i] = a->sliidx[i];
2026d4002b98SHong Zhang 
2027d4002b98SHong Zhang   /* allocate the matrix space */
2028d4002b98SHong Zhang   if (mallocmatspace) {
20299566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(a->maxallocmat, &c->val, a->maxallocmat, &c->colidx));
2030d4002b98SHong Zhang 
2031d4002b98SHong Zhang     c->singlemalloc = PETSC_TRUE;
2032d4002b98SHong Zhang 
2033d4002b98SHong Zhang     if (m > 0) {
20349566063dSJacob Faibussowitsch       PetscCall(PetscArraycpy(c->colidx, a->colidx, a->maxallocmat));
2035d4002b98SHong Zhang       if (cpvalues == MAT_COPY_VALUES) {
20369566063dSJacob Faibussowitsch         PetscCall(PetscArraycpy(c->val, a->val, a->maxallocmat));
2037d4002b98SHong Zhang       } else {
20389566063dSJacob Faibussowitsch         PetscCall(PetscArrayzero(c->val, a->maxallocmat));
2039d4002b98SHong Zhang       }
2040d4002b98SHong Zhang     }
2041d4002b98SHong Zhang   }
2042d4002b98SHong Zhang 
2043d4002b98SHong Zhang   c->ignorezeroentries = a->ignorezeroentries;
2044d4002b98SHong Zhang   c->roworiented       = a->roworiented;
2045d4002b98SHong Zhang   c->nonew             = a->nonew;
2046d4002b98SHong Zhang   if (a->diag) {
20479566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(m, &c->diag));
2048ad540459SPierre Jolivet     for (i = 0; i < m; i++) c->diag[i] = a->diag[i];
2049f4259b30SLisandro Dalcin   } else c->diag = NULL;
2050d4002b98SHong Zhang 
2051f4259b30SLisandro Dalcin   c->solve_work         = NULL;
2052f4259b30SLisandro Dalcin   c->saved_values       = NULL;
2053f4259b30SLisandro Dalcin   c->idiag              = NULL;
2054f4259b30SLisandro Dalcin   c->ssor_work          = NULL;
2055d4002b98SHong Zhang   c->keepnonzeropattern = a->keepnonzeropattern;
2056d4002b98SHong Zhang   c->free_val           = PETSC_TRUE;
2057d4002b98SHong Zhang   c->free_colidx        = PETSC_TRUE;
2058d4002b98SHong Zhang 
2059d4002b98SHong Zhang   c->maxallocmat  = a->maxallocmat;
2060d4002b98SHong Zhang   c->maxallocrow  = a->maxallocrow;
2061d4002b98SHong Zhang   c->rlenmax      = a->rlenmax;
2062d4002b98SHong Zhang   c->nz           = a->nz;
2063d4002b98SHong Zhang   C->preallocated = PETSC_TRUE;
2064d4002b98SHong Zhang 
2065d4002b98SHong Zhang   c->nonzerorowcnt = a->nonzerorowcnt;
2066d4002b98SHong Zhang   C->nonzerostate  = A->nonzerostate;
2067d4002b98SHong Zhang 
20689566063dSJacob Faibussowitsch   PetscCall(PetscFunctionListDuplicate(((PetscObject)A)->qlist, &((PetscObject)C)->qlist));
20693ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2070d4002b98SHong Zhang }
2071d4002b98SHong Zhang 
2072d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDuplicate_SeqSELL(Mat A, MatDuplicateOption cpvalues, Mat *B)
2073d71ae5a4SJacob Faibussowitsch {
2074d4002b98SHong Zhang   PetscFunctionBegin;
20759566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), B));
20769566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*B, A->rmap->n, A->cmap->n, A->rmap->n, A->cmap->n));
207748a46eb9SPierre Jolivet   if (!(A->rmap->n % A->rmap->bs) && !(A->cmap->n % A->cmap->bs)) PetscCall(MatSetBlockSizesFromMats(*B, A, A));
20789566063dSJacob Faibussowitsch   PetscCall(MatSetType(*B, ((PetscObject)A)->type_name));
20799566063dSJacob Faibussowitsch   PetscCall(MatDuplicateNoCreate_SeqSELL(*B, A, cpvalues, PETSC_TRUE));
20803ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2081d4002b98SHong Zhang }
2082d4002b98SHong Zhang 
2083ed73aabaSBarry Smith /*MC
2084ed73aabaSBarry Smith    MATSEQSELL - MATSEQSELL = "seqsell" - A matrix type to be used for sequential sparse matrices,
2085ed73aabaSBarry Smith    based on the sliced Ellpack format
2086ed73aabaSBarry Smith 
208720f4b53cSBarry Smith    Options Database Key:
208811a5261eSBarry Smith . -mat_type seqsell - sets the matrix type to "`MATSEQELL` during a call to `MatSetFromOptions()`
2089ed73aabaSBarry Smith 
2090ed73aabaSBarry Smith    Level: beginner
2091ed73aabaSBarry Smith 
209267be906fSBarry Smith .seealso: `Mat`, `MatCreateSeqSell()`, `MATSELL`, `MATMPISELL`, `MATSEQAIJ`, `MATAIJ`, `MATMPIAIJ`
2093ed73aabaSBarry Smith M*/
2094ed73aabaSBarry Smith 
2095ed73aabaSBarry Smith /*MC
2096ed73aabaSBarry Smith    MATSELL - MATSELL = "sell" - A matrix type to be used for sparse matrices.
2097ed73aabaSBarry Smith 
209811a5261eSBarry Smith    This matrix type is identical to `MATSEQSELL` when constructed with a single process communicator,
209911a5261eSBarry Smith    and `MATMPISELL` otherwise.  As a result, for single process communicators,
210011a5261eSBarry Smith   `MatSeqSELLSetPreallocation()` is supported, and similarly `MatMPISELLSetPreallocation()` is supported
2101ed73aabaSBarry Smith   for communicators controlling multiple processes.  It is recommended that you call both of
2102ed73aabaSBarry Smith   the above preallocation routines for simplicity.
2103ed73aabaSBarry Smith 
210420f4b53cSBarry Smith    Options Database Key:
2105ed73aabaSBarry Smith . -mat_type sell - sets the matrix type to "sell" during a call to MatSetFromOptions()
2106ed73aabaSBarry Smith 
2107ed73aabaSBarry Smith   Level: beginner
2108ed73aabaSBarry Smith 
2109ed73aabaSBarry Smith   Notes:
2110ed73aabaSBarry Smith    This format is only supported for real scalars, double precision, and 32 bit indices (the defaults).
2111ed73aabaSBarry Smith 
2112ed73aabaSBarry Smith    It can provide better performance on Intel and AMD processes with AVX2 or AVX512 support for matrices that have a similar number of
2113ed73aabaSBarry Smith    non-zeros in contiguous groups of rows. However if the computation is memory bandwidth limited it may not provide much improvement.
2114ed73aabaSBarry Smith 
2115ed73aabaSBarry Smith   Developer Notes:
2116ed73aabaSBarry Smith    On Intel (and AMD) systems some of the matrix operations use SIMD (AVX) instructions to achieve higher performance.
2117ed73aabaSBarry Smith 
2118ed73aabaSBarry Smith    The sparse matrix format is as follows. For simplicity we assume a slice size of 2, it is actually 8
2119ed73aabaSBarry Smith .vb
2120ed73aabaSBarry Smith                             (2 0  3 4)
2121ed73aabaSBarry Smith    Consider the matrix A =  (5 0  6 0)
2122ed73aabaSBarry Smith                             (0 0  7 8)
2123ed73aabaSBarry Smith                             (0 0  9 9)
2124ed73aabaSBarry Smith 
2125ed73aabaSBarry Smith    symbolically the Ellpack format can be written as
2126ed73aabaSBarry Smith 
2127ed73aabaSBarry Smith         (2 3 4 |)           (0 2 3 |)
2128ed73aabaSBarry Smith    v =  (5 6 0 |)  colidx = (0 2 2 |)
2129ed73aabaSBarry Smith         --------            ---------
2130ed73aabaSBarry Smith         (7 8 |)             (2 3 |)
2131ed73aabaSBarry Smith         (9 9 |)             (2 3 |)
2132ed73aabaSBarry Smith 
2133ed73aabaSBarry Smith     The data for 2 contiguous rows of the matrix are stored together (in column-major format) (with any left-over rows handled as a special case).
2134ed73aabaSBarry Smith     Any of the rows in a slice fewer columns than the rest of the slice (row 1 above) are padded with a previous valid column in their "extra" colidx[] locations and
2135ed73aabaSBarry Smith     zeros in their "extra" v locations so that the matrix operations do not need special code to handle different length rows within the 2 rows in a slice.
2136ed73aabaSBarry Smith 
2137ed73aabaSBarry Smith     The one-dimensional representation of v used in the code is (2 5 3 6 4 0 7 9 8 9)  and for colidx is (0 0 2 2 3 2 2 2 3 3)
2138ed73aabaSBarry Smith 
2139ed73aabaSBarry Smith .ve
2140ed73aabaSBarry Smith 
2141ed73aabaSBarry Smith       See MatMult_SeqSELL() for how this format is used with the SIMD operations to achieve high performance.
2142ed73aabaSBarry Smith 
2143ed73aabaSBarry Smith  References:
2144606c0280SSatish Balay . * - Hong Zhang, Richard T. Mills, Karl Rupp, and Barry F. Smith, Vectorized Parallel Sparse Matrix-Vector Multiplication in {PETSc} Using {AVX-512},
2145ed73aabaSBarry Smith    Proceedings of the 47th International Conference on Parallel Processing, 2018.
2146ed73aabaSBarry Smith 
214767be906fSBarry Smith .seealso: `Mat`, `MatCreateSeqSELL()`, `MatCreateSeqAIJ()`, `MatCreateSell()`, `MATSEQSELL`, `MATMPISELL`, `MATSEQAIJ`, `MATMPIAIJ`, `MATAIJ`
2148ed73aabaSBarry Smith M*/
2149ed73aabaSBarry Smith 
2150d4002b98SHong Zhang /*@C
215111a5261eSBarry Smith        MatCreateSeqSELL - Creates a sparse matrix in `MATSEQSELL` format.
2152d4002b98SHong Zhang 
21532ef1f0ffSBarry Smith  Collective
2154d4002b98SHong Zhang 
2155d4002b98SHong Zhang  Input Parameters:
215611a5261eSBarry Smith +  comm - MPI communicator, set to `PETSC_COMM_SELF`
2157d4002b98SHong Zhang .  m - number of rows
2158d4002b98SHong Zhang .  n - number of columns
215920f4b53cSBarry Smith .  rlenmax - maximum number of nonzeros in a row, ignored if `rlen` is provided
216020f4b53cSBarry Smith -  rlen - array containing the number of nonzeros in the various rows (possibly different for each row) or NULL
2161d4002b98SHong Zhang 
2162d4002b98SHong Zhang  Output Parameter:
2163d4002b98SHong Zhang .  A - the matrix
2164d4002b98SHong Zhang 
216520f4b53cSBarry Smith  Level: intermediate
216620f4b53cSBarry Smith 
216720f4b53cSBarry Smith  Notes:
216811a5261eSBarry Smith  It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`,
2169f6f02116SRichard Tran Mills  MatXXXXSetPreallocation() paradigm instead of this routine directly.
217011a5261eSBarry Smith  [MatXXXXSetPreallocation() is, for example, `MatSeqSELLSetPreallocation()`]
2171d4002b98SHong Zhang 
217220f4b53cSBarry Smith  Specify the preallocated storage with either `rlenmax` or `rlen` (not both).
217320f4b53cSBarry Smith  Set `rlenmax` = `PETSC_DEFAULT` and `rlen` = `NULL` for PETSc to control dynamic memory
217420f4b53cSBarry Smith  allocation.
2175d4002b98SHong Zhang 
217667be906fSBarry Smith  .seealso: `Mat`, `MATSEQSELL`, `MatCreate()`, `MatCreateSELL()`, `MatSetValues()`, `MatSeqSELLSetPreallocation()`, `MATSELL`, `MATSEQSELL`, `MATMPISELL`
2177d4002b98SHong Zhang  @*/
217820f4b53cSBarry Smith PetscErrorCode MatCreateSeqSELL(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt rlenmax, const PetscInt rlen[], Mat *A)
2179d71ae5a4SJacob Faibussowitsch {
2180d4002b98SHong Zhang   PetscFunctionBegin;
21819566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm, A));
21829566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A, m, n, m, n));
21839566063dSJacob Faibussowitsch   PetscCall(MatSetType(*A, MATSEQSELL));
218420f4b53cSBarry Smith   PetscCall(MatSeqSELLSetPreallocation_SeqSELL(*A, rlenmax, rlen));
21853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2186d4002b98SHong Zhang }
2187d4002b98SHong Zhang 
2188d71ae5a4SJacob Faibussowitsch PetscErrorCode MatEqual_SeqSELL(Mat A, Mat B, PetscBool *flg)
2189d71ae5a4SJacob Faibussowitsch {
2190d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data, *b = (Mat_SeqSELL *)B->data;
2191d4002b98SHong Zhang   PetscInt     totalslices = a->totalslices;
2192d4002b98SHong Zhang 
2193d4002b98SHong Zhang   PetscFunctionBegin;
2194d4002b98SHong Zhang   /* If the  matrix dimensions are not equal,or no of nonzeros */
2195d4002b98SHong Zhang   if ((A->rmap->n != B->rmap->n) || (A->cmap->n != B->cmap->n) || (a->nz != b->nz) || (a->rlenmax != b->rlenmax)) {
2196d4002b98SHong Zhang     *flg = PETSC_FALSE;
21973ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
2198d4002b98SHong Zhang   }
2199d4002b98SHong Zhang   /* if the a->colidx are the same */
22009566063dSJacob Faibussowitsch   PetscCall(PetscArraycmp(a->colidx, b->colidx, a->sliidx[totalslices], flg));
22013ba16761SJacob Faibussowitsch   if (!*flg) PetscFunctionReturn(PETSC_SUCCESS);
2202d4002b98SHong Zhang   /* if a->val are the same */
22039566063dSJacob Faibussowitsch   PetscCall(PetscArraycmp(a->val, b->val, a->sliidx[totalslices], flg));
22043ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2205d4002b98SHong Zhang }
2206d4002b98SHong Zhang 
2207d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqSELLInvalidateDiagonal(Mat A)
2208d71ae5a4SJacob Faibussowitsch {
2209d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
2210d4002b98SHong Zhang 
2211d4002b98SHong Zhang   PetscFunctionBegin;
2212d4002b98SHong Zhang   a->idiagvalid = PETSC_FALSE;
22133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2214d4002b98SHong Zhang }
2215d4002b98SHong Zhang 
2216d71ae5a4SJacob Faibussowitsch PetscErrorCode MatConjugate_SeqSELL(Mat A)
2217d71ae5a4SJacob Faibussowitsch {
2218d4002b98SHong Zhang #if defined(PETSC_USE_COMPLEX)
2219d4002b98SHong Zhang   Mat_SeqSELL *a = (Mat_SeqSELL *)A->data;
2220d4002b98SHong Zhang   PetscInt     i;
2221d4002b98SHong Zhang   PetscScalar *val = a->val;
2222d4002b98SHong Zhang 
2223d4002b98SHong Zhang   PetscFunctionBegin;
2224*2d1451d4SHong Zhang   for (i = 0; i < a->sliidx[a->totalslices]; i++) { val[i] = PetscConj(val[i]); }
2225*2d1451d4SHong Zhang   #if defined(PETSC_HAVE_CUDA)
2226*2d1451d4SHong Zhang   if (A->offloadmask != PETSC_OFFLOAD_UNALLOCATED) A->offloadmask = PETSC_OFFLOAD_CPU;
2227*2d1451d4SHong Zhang   #endif
2228d4002b98SHong Zhang #else
2229d4002b98SHong Zhang   PetscFunctionBegin;
2230d4002b98SHong Zhang #endif
22313ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2232d4002b98SHong Zhang }
2233