1f478cf82SStefano Zampini #include <petscmat.h> 2f478cf82SStefano Zampini 3308ba433SVaclav Hapla #define NNORMS 6 4308ba433SVaclav Hapla 5308ba433SVaclav Hapla static PetscErrorCode MatLoadComputeNorms(Mat data_mat, PetscViewer inp_viewer, PetscReal norms[]) 6f478cf82SStefano Zampini { 7308ba433SVaclav Hapla Mat corr_mat; 8308ba433SVaclav Hapla PetscInt M,N; 9f478cf82SStefano Zampini PetscErrorCode ierr; 10f478cf82SStefano Zampini 11308ba433SVaclav Hapla PetscFunctionBegin; 12f478cf82SStefano Zampini ierr = MatLoad(data_mat, inp_viewer);CHKERRQ(ierr); 13f478cf82SStefano Zampini ierr = MatAssemblyBegin(data_mat, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 14f478cf82SStefano Zampini ierr = MatAssemblyEnd(data_mat, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 15f478cf82SStefano Zampini ierr = MatViewFromOptions(data_mat, NULL, "-view_mat");CHKERRQ(ierr); 16f478cf82SStefano Zampini 17308ba433SVaclav Hapla ierr = MatGetSize(data_mat, &M, &N);CHKERRQ(ierr); 18*8fffc762SJacob Faibussowitsch ierr = PetscPrintf(PETSC_COMM_WORLD, "Data matrix size: %" PetscInt_FMT " %" PetscInt_FMT "\n", M,N);CHKERRQ(ierr); 19308ba433SVaclav Hapla 20308ba433SVaclav Hapla /* compute matrix norms */ 21308ba433SVaclav Hapla ierr = MatNorm(data_mat, NORM_1, &norms[0]);CHKERRQ(ierr); 22308ba433SVaclav Hapla ierr = MatNorm(data_mat, NORM_INFINITY, &norms[1]);CHKERRQ(ierr); 23308ba433SVaclav Hapla ierr = MatNorm(data_mat, NORM_FROBENIUS, &norms[2]);CHKERRQ(ierr); 24308ba433SVaclav Hapla ierr = PetscPrintf(PETSC_COMM_WORLD, "Data matrix norms: %g %g %g\n", (double)norms[0],(double)norms[1],(double)norms[2]);CHKERRQ(ierr); 25f478cf82SStefano Zampini 26f478cf82SStefano Zampini /* compute autocorrelation matrix */ 27f478cf82SStefano Zampini ierr = MatMatTransposeMult(data_mat, data_mat, MAT_INITIAL_MATRIX, PETSC_DEFAULT, &corr_mat);CHKERRQ(ierr); 28f478cf82SStefano Zampini 29308ba433SVaclav Hapla /* compute autocorrelation matrix norms */ 30308ba433SVaclav Hapla ierr = MatNorm(corr_mat, NORM_1, &norms[3]);CHKERRQ(ierr); 31308ba433SVaclav Hapla ierr = MatNorm(corr_mat, NORM_INFINITY, &norms[4]);CHKERRQ(ierr); 32308ba433SVaclav Hapla ierr = MatNorm(corr_mat, NORM_FROBENIUS, &norms[5]);CHKERRQ(ierr); 33308ba433SVaclav Hapla ierr = PetscPrintf(PETSC_COMM_WORLD, "Autocorrelation matrix norms: %g %g %g\n", (double)norms[3],(double)norms[4],(double)norms[5]);CHKERRQ(ierr); 34f478cf82SStefano Zampini 35f478cf82SStefano Zampini ierr = MatDestroy(&corr_mat);CHKERRQ(ierr); 36308ba433SVaclav Hapla PetscFunctionReturn(0); 37f478cf82SStefano Zampini } 38308ba433SVaclav Hapla 39308ba433SVaclav Hapla static PetscErrorCode GetReader(MPI_Comm comm, const char option[], PetscViewer *r, PetscViewerFormat *fmt) 40308ba433SVaclav Hapla { 41308ba433SVaclav Hapla PetscBool flg; 42308ba433SVaclav Hapla PetscErrorCode ierr; 43308ba433SVaclav Hapla 44308ba433SVaclav Hapla PetscFunctionBegin; 45308ba433SVaclav Hapla ierr = PetscOptionsGetViewer(PETSC_COMM_SELF, NULL, NULL, option, r, fmt, &flg);CHKERRQ(ierr); 46308ba433SVaclav Hapla if (flg) { 47308ba433SVaclav Hapla PetscFileMode mode; 48308ba433SVaclav Hapla ierr = PetscViewerFileGetMode(*r, &mode);CHKERRQ(ierr); 49308ba433SVaclav Hapla flg = (PetscBool) (mode == FILE_MODE_READ); 50308ba433SVaclav Hapla } 51308ba433SVaclav Hapla if (!flg) SETERRQ1(PETSC_COMM_WORLD,PETSC_ERR_USER_INPUT,"Need to specify %s viewer_type:file:format:read", option); 52308ba433SVaclav Hapla PetscFunctionReturn(0); 53308ba433SVaclav Hapla } 54308ba433SVaclav Hapla 55308ba433SVaclav Hapla int main(int argc, char **argv) 56308ba433SVaclav Hapla { 57308ba433SVaclav Hapla PetscErrorCode ierr; 58308ba433SVaclav Hapla PetscInt i; 59308ba433SVaclav Hapla PetscReal norms0[NNORMS], norms1[NNORMS]; 60308ba433SVaclav Hapla PetscViewer inp_viewer; 61308ba433SVaclav Hapla PetscViewerFormat fmt; 62308ba433SVaclav Hapla Mat data_mat; 63308ba433SVaclav Hapla char mat_name[PETSC_MAX_PATH_LEN]="dmatrix"; 64308ba433SVaclav Hapla 65308ba433SVaclav Hapla ierr = PetscInitialize(&argc, &argv, NULL, NULL);if (ierr) return ierr; 66308ba433SVaclav Hapla ierr = PetscOptionsGetString(NULL,NULL,"-mat_name",mat_name,sizeof(mat_name),NULL);CHKERRQ(ierr); 67308ba433SVaclav Hapla 68308ba433SVaclav Hapla /* load matrix sequentially */ 69308ba433SVaclav Hapla ierr = MatCreate(PETSC_COMM_SELF, &data_mat);CHKERRQ(ierr); 70308ba433SVaclav Hapla ierr = MatSetType(data_mat,MATDENSE);CHKERRQ(ierr); 71308ba433SVaclav Hapla ierr = PetscObjectSetName((PetscObject)data_mat, mat_name);CHKERRQ(ierr); 72308ba433SVaclav Hapla ierr = GetReader(PETSC_COMM_SELF, "-serial_reader", &inp_viewer, &fmt);CHKERRQ(ierr); 73308ba433SVaclav Hapla ierr = PetscViewerPushFormat(inp_viewer, fmt);CHKERRQ(ierr); 74308ba433SVaclav Hapla ierr = MatLoadComputeNorms(data_mat, inp_viewer, norms0);CHKERRQ(ierr); 75308ba433SVaclav Hapla ierr = PetscViewerPopFormat(inp_viewer);CHKERRQ(ierr); 76308ba433SVaclav Hapla ierr = PetscViewerDestroy(&inp_viewer);CHKERRQ(ierr); 77308ba433SVaclav Hapla ierr = MatViewFromOptions(data_mat, NULL, "-view_serial_mat");CHKERRQ(ierr); 78308ba433SVaclav Hapla ierr = MatDestroy(&data_mat);CHKERRQ(ierr); 79308ba433SVaclav Hapla 80308ba433SVaclav Hapla /* load matrix in parallel */ 81308ba433SVaclav Hapla ierr = MatCreate(PETSC_COMM_WORLD, &data_mat);CHKERRQ(ierr); 82308ba433SVaclav Hapla ierr = MatSetType(data_mat,MATDENSE);CHKERRQ(ierr); 83308ba433SVaclav Hapla ierr = PetscObjectSetName((PetscObject)data_mat, mat_name);CHKERRQ(ierr); 84308ba433SVaclav Hapla ierr = GetReader(PETSC_COMM_WORLD, "-parallel_reader", &inp_viewer, &fmt);CHKERRQ(ierr); 85308ba433SVaclav Hapla ierr = PetscViewerPushFormat(inp_viewer, fmt);CHKERRQ(ierr); 86308ba433SVaclav Hapla ierr = MatLoadComputeNorms(data_mat, inp_viewer, norms1);CHKERRQ(ierr); 87308ba433SVaclav Hapla ierr = PetscViewerPopFormat(inp_viewer);CHKERRQ(ierr); 88308ba433SVaclav Hapla ierr = PetscViewerDestroy(&inp_viewer);CHKERRQ(ierr); 89308ba433SVaclav Hapla ierr = MatViewFromOptions(data_mat, NULL, "-view_parallel_mat");CHKERRQ(ierr); 90308ba433SVaclav Hapla ierr = MatDestroy(&data_mat);CHKERRQ(ierr); 91308ba433SVaclav Hapla 92308ba433SVaclav Hapla for (i=0; i<NNORMS; i++) { 93*8fffc762SJacob Faibussowitsch if (PetscAbs(norms0[i] - norms1[i]) > PETSC_SMALL) SETERRQ4(PETSC_COMM_SELF, PETSC_ERR_PLIB, "norm0[%" PetscInt_FMT "] = %g != %g = norms1[%" PetscInt_FMT "]", i, (double)norms0[i], (double)norms1[i], i); 94308ba433SVaclav Hapla } 95308ba433SVaclav Hapla 96308ba433SVaclav Hapla ierr = PetscFinalize(); 97308ba433SVaclav Hapla return ierr; 98308ba433SVaclav Hapla } 99308ba433SVaclav Hapla 100308ba433SVaclav Hapla /*TEST 101308ba433SVaclav Hapla 102308ba433SVaclav Hapla test: 103308ba433SVaclav Hapla suffix: 1 104308ba433SVaclav Hapla requires: hdf5 datafilespath complex 105308ba433SVaclav Hapla args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read 106308ba433SVaclav Hapla nsize: {{1 2 4}} 107308ba433SVaclav Hapla 108308ba433SVaclav Hapla test: 109308ba433SVaclav Hapla requires: hdf5 datafilespath 110308ba433SVaclav Hapla args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read 111308ba433SVaclav Hapla nsize: {{1 2}} 112308ba433SVaclav Hapla test: 113308ba433SVaclav Hapla suffix: 2-complex 114308ba433SVaclav Hapla requires: complex 115308ba433SVaclav Hapla args: -mat_name ComplexMat 116308ba433SVaclav Hapla test: 117308ba433SVaclav Hapla suffix: 2-real 118308ba433SVaclav Hapla requires: !complex 119308ba433SVaclav Hapla args: -mat_name RealMat 120308ba433SVaclav Hapla 121308ba433SVaclav Hapla TEST*/ 122