1f478cf82SStefano Zampini #include <petscmat.h> 2f478cf82SStefano Zampini 3308ba433SVaclav Hapla #define NNORMS 6 4308ba433SVaclav Hapla 5*9371c9d4SSatish Balay static PetscErrorCode MatLoadComputeNorms(Mat data_mat, PetscViewer inp_viewer, PetscReal norms[]) { 6308ba433SVaclav Hapla Mat corr_mat; 7308ba433SVaclav Hapla PetscInt M, N; 8f478cf82SStefano Zampini 9308ba433SVaclav Hapla PetscFunctionBegin; 109566063dSJacob Faibussowitsch PetscCall(MatLoad(data_mat, inp_viewer)); 119566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(data_mat, MAT_FINAL_ASSEMBLY)); 129566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(data_mat, MAT_FINAL_ASSEMBLY)); 139566063dSJacob Faibussowitsch PetscCall(MatViewFromOptions(data_mat, NULL, "-view_mat")); 14f478cf82SStefano Zampini 159566063dSJacob Faibussowitsch PetscCall(MatGetSize(data_mat, &M, &N)); 169566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Data matrix size: %" PetscInt_FMT " %" PetscInt_FMT "\n", M, N)); 17308ba433SVaclav Hapla 18308ba433SVaclav Hapla /* compute matrix norms */ 199566063dSJacob Faibussowitsch PetscCall(MatNorm(data_mat, NORM_1, &norms[0])); 209566063dSJacob Faibussowitsch PetscCall(MatNorm(data_mat, NORM_INFINITY, &norms[1])); 219566063dSJacob Faibussowitsch PetscCall(MatNorm(data_mat, NORM_FROBENIUS, &norms[2])); 229566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Data matrix norms: %g %g %g\n", (double)norms[0], (double)norms[1], (double)norms[2])); 23f478cf82SStefano Zampini 24f478cf82SStefano Zampini /* compute autocorrelation matrix */ 259566063dSJacob Faibussowitsch PetscCall(MatMatTransposeMult(data_mat, data_mat, MAT_INITIAL_MATRIX, PETSC_DEFAULT, &corr_mat)); 26f478cf82SStefano Zampini 27308ba433SVaclav Hapla /* compute autocorrelation matrix norms */ 289566063dSJacob Faibussowitsch PetscCall(MatNorm(corr_mat, NORM_1, &norms[3])); 299566063dSJacob Faibussowitsch PetscCall(MatNorm(corr_mat, NORM_INFINITY, &norms[4])); 309566063dSJacob Faibussowitsch PetscCall(MatNorm(corr_mat, NORM_FROBENIUS, &norms[5])); 319566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Autocorrelation matrix norms: %g %g %g\n", (double)norms[3], (double)norms[4], (double)norms[5])); 32f478cf82SStefano Zampini 339566063dSJacob Faibussowitsch PetscCall(MatDestroy(&corr_mat)); 34308ba433SVaclav Hapla PetscFunctionReturn(0); 35f478cf82SStefano Zampini } 36308ba433SVaclav Hapla 37*9371c9d4SSatish Balay static PetscErrorCode GetReader(MPI_Comm comm, const char option[], PetscViewer *r, PetscViewerFormat *fmt) { 38308ba433SVaclav Hapla PetscBool flg; 39308ba433SVaclav Hapla 40308ba433SVaclav Hapla PetscFunctionBegin; 419566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetViewer(PETSC_COMM_SELF, NULL, NULL, option, r, fmt, &flg)); 42308ba433SVaclav Hapla if (flg) { 43308ba433SVaclav Hapla PetscFileMode mode; 449566063dSJacob Faibussowitsch PetscCall(PetscViewerFileGetMode(*r, &mode)); 45308ba433SVaclav Hapla flg = (PetscBool)(mode == FILE_MODE_READ); 46308ba433SVaclav Hapla } 4728b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_WORLD, PETSC_ERR_USER_INPUT, "Need to specify %s viewer_type:file:format:read", option); 48308ba433SVaclav Hapla PetscFunctionReturn(0); 49308ba433SVaclav Hapla } 50308ba433SVaclav Hapla 51*9371c9d4SSatish Balay int main(int argc, char **argv) { 52308ba433SVaclav Hapla PetscInt i; 53308ba433SVaclav Hapla PetscReal norms0[NNORMS], norms1[NNORMS]; 54308ba433SVaclav Hapla PetscViewer inp_viewer; 55308ba433SVaclav Hapla PetscViewerFormat fmt; 56308ba433SVaclav Hapla Mat data_mat; 57308ba433SVaclav Hapla char mat_name[PETSC_MAX_PATH_LEN] = "dmatrix"; 58308ba433SVaclav Hapla 59327415f7SBarry Smith PetscFunctionBeginUser; 609566063dSJacob Faibussowitsch PetscCall(PetscInitialize(&argc, &argv, NULL, NULL)); 619566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL, NULL, "-mat_name", mat_name, sizeof(mat_name), NULL)); 62308ba433SVaclav Hapla 63308ba433SVaclav Hapla /* load matrix sequentially */ 649566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &data_mat)); 659566063dSJacob Faibussowitsch PetscCall(MatSetType(data_mat, MATDENSE)); 669566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)data_mat, mat_name)); 679566063dSJacob Faibussowitsch PetscCall(GetReader(PETSC_COMM_SELF, "-serial_reader", &inp_viewer, &fmt)); 689566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(inp_viewer, fmt)); 699566063dSJacob Faibussowitsch PetscCall(MatLoadComputeNorms(data_mat, inp_viewer, norms0)); 709566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(inp_viewer)); 719566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&inp_viewer)); 729566063dSJacob Faibussowitsch PetscCall(MatViewFromOptions(data_mat, NULL, "-view_serial_mat")); 739566063dSJacob Faibussowitsch PetscCall(MatDestroy(&data_mat)); 74308ba433SVaclav Hapla 75308ba433SVaclav Hapla /* load matrix in parallel */ 769566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_WORLD, &data_mat)); 779566063dSJacob Faibussowitsch PetscCall(MatSetType(data_mat, MATDENSE)); 789566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)data_mat, mat_name)); 799566063dSJacob Faibussowitsch PetscCall(GetReader(PETSC_COMM_WORLD, "-parallel_reader", &inp_viewer, &fmt)); 809566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(inp_viewer, fmt)); 819566063dSJacob Faibussowitsch PetscCall(MatLoadComputeNorms(data_mat, inp_viewer, norms1)); 829566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(inp_viewer)); 839566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&inp_viewer)); 849566063dSJacob Faibussowitsch PetscCall(MatViewFromOptions(data_mat, NULL, "-view_parallel_mat")); 859566063dSJacob Faibussowitsch PetscCall(MatDestroy(&data_mat)); 86308ba433SVaclav Hapla 87*9371c9d4SSatish Balay for (i = 0; i < NNORMS; i++) { PetscCheck(PetscAbs(norms0[i] - norms1[i]) <= PETSC_SMALL, PETSC_COMM_SELF, PETSC_ERR_PLIB, "norm0[%" PetscInt_FMT "] = %g != %g = norms1[%" PetscInt_FMT "]", i, (double)norms0[i], (double)norms1[i], i); } 88308ba433SVaclav Hapla 899566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 90b122ec5aSJacob Faibussowitsch return 0; 91308ba433SVaclav Hapla } 92308ba433SVaclav Hapla 93308ba433SVaclav Hapla /*TEST 94308ba433SVaclav Hapla 95308ba433SVaclav Hapla test: 96308ba433SVaclav Hapla suffix: 1 97308ba433SVaclav Hapla requires: hdf5 datafilespath complex 98308ba433SVaclav Hapla args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/sample_data.h5::read 99308ba433SVaclav Hapla nsize: {{1 2 4}} 100308ba433SVaclav Hapla 101308ba433SVaclav Hapla test: 102308ba433SVaclav Hapla requires: hdf5 datafilespath 103308ba433SVaclav Hapla args: -serial_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read -parallel_reader hdf5:${DATAFILESPATH}/matrices/hdf5/tiny_rectangular_mat.h5::read 104308ba433SVaclav Hapla nsize: {{1 2}} 105308ba433SVaclav Hapla test: 106308ba433SVaclav Hapla suffix: 2-complex 107308ba433SVaclav Hapla requires: complex 108308ba433SVaclav Hapla args: -mat_name ComplexMat 109308ba433SVaclav Hapla test: 110308ba433SVaclav Hapla suffix: 2-real 111308ba433SVaclav Hapla requires: !complex 112308ba433SVaclav Hapla args: -mat_name RealMat 113308ba433SVaclav Hapla 114308ba433SVaclav Hapla TEST*/ 115