xref: /petsc/src/mat/utils/gcreate.c (revision 05869f158e69ab9265b8a31b1fa8b56f90c32193)
1be1d678aSKris Buschelman #define PETSCMAT_DLL
27807a1faSBarry Smith 
3273d9f13SBarry Smith #include "src/mat/matimpl.h"       /*I "petscmat.h"  I*/
4325e03aeSBarry Smith #include "petscsys.h"
57807a1faSBarry Smith 
64a2ae208SSatish Balay #undef __FUNCT__
74a2ae208SSatish Balay #define __FUNCT__ "MatPublish_Base"
86849ba73SBarry Smith static PetscErrorCode MatPublish_Base(PetscObject obj)
935d8aa7fSBarry Smith {
1035d8aa7fSBarry Smith   PetscFunctionBegin;
1135d8aa7fSBarry Smith   PetscFunctionReturn(0);
1235d8aa7fSBarry Smith }
1335d8aa7fSBarry Smith 
1435d8aa7fSBarry Smith 
154a2ae208SSatish Balay #undef __FUNCT__
164a2ae208SSatish Balay #define __FUNCT__ "MatCreate"
17*05869f15SSatish Balay /*@
1869dd0797SLois Curfman McInnes    MatCreate - Creates a matrix where the type is determined
197e5f4302SBarry Smith    from either a call to MatSetType() or from the options database
207e5f4302SBarry Smith    with a call to MatSetFromOptions(). The default matrix type is
217e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() or MatCreateMPIAIJ()
227e5f4302SBarry Smith    if you do not set a type in the options database. If you never
237e5f4302SBarry Smith    call MatSetType() or MatSetFromOptions() it will generate an
24f8ab6608SSatish Balay    error when you try to use the matrix.
2583e1b59cSLois Curfman McInnes 
26cb13003dSBarry Smith    Collective on MPI_Comm
27cb13003dSBarry Smith 
28f69a0ea3SMatthew Knepley    Input Parameter:
29f69a0ea3SMatthew Knepley .  comm - MPI communicator
307807a1faSBarry Smith 
317807a1faSBarry Smith    Output Parameter:
32dc401e71SLois Curfman McInnes .  A - the matrix
33e0b365e2SLois Curfman McInnes 
34273d9f13SBarry Smith    Options Database Keys:
35273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
36273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
37273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
38273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
39273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
40273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
41273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
42273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
43273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
44e0b365e2SLois Curfman McInnes 
4583e1b59cSLois Curfman McInnes    Even More Options Database Keys:
4683e1b59cSLois Curfman McInnes    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
4783e1b59cSLois Curfman McInnes    for additional format-specific options.
48e0b365e2SLois Curfman McInnes 
49bd9ce289SLois Curfman McInnes    Notes:
50ec6e0d80SSatish Balay 
51273d9f13SBarry Smith    Level: beginner
52273d9f13SBarry Smith 
53a2fc510eSBarry Smith    User manual sections:
54a2fc510eSBarry Smith +   sec_matcreate
55a2fc510eSBarry Smith -   chapter_matrices
56a2fc510eSBarry Smith 
57273d9f13SBarry Smith .keywords: matrix, create
58273d9f13SBarry Smith 
59273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
60273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
61273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
62273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
63273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
64273d9f13SBarry Smith           MatConvert()
65273d9f13SBarry Smith @*/
66f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatCreate(MPI_Comm comm,Mat *A)
67273d9f13SBarry Smith {
68273d9f13SBarry Smith   Mat            B;
69dfbe8321SBarry Smith   PetscErrorCode ierr;
70273d9f13SBarry Smith 
71273d9f13SBarry Smith   PetscFunctionBegin;
72f69a0ea3SMatthew Knepley   PetscValidPointer(A,2);
7397f1f81fSBarry Smith 
748ba1e511SMatthew Knepley   *A = PETSC_NULL;
758ba1e511SMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
768ba1e511SMatthew Knepley   ierr = MatInitializePackage(PETSC_NULL);CHKERRQ(ierr);
778ba1e511SMatthew Knepley #endif
788ba1e511SMatthew Knepley 
7952e6d16bSBarry Smith   ierr = PetscHeaderCreate(B,_p_Mat,struct _MatOps,MAT_COOKIE,0,"Mat",comm,MatDestroy,MatView);CHKERRQ(ierr);
80f69a0ea3SMatthew Knepley   B->m             = -1;
81f69a0ea3SMatthew Knepley   B->M             = -1;
82f69a0ea3SMatthew Knepley   B->n             = -1;
83f69a0ea3SMatthew Knepley   B->N             = -1;
84521d7252SBarry Smith   B->bs            = 1;
85273d9f13SBarry Smith   B->preallocated  = PETSC_FALSE;
8635d8aa7fSBarry Smith   B->bops->publish = MatPublish_Base;
87273d9f13SBarry Smith   *A               = B;
88273d9f13SBarry Smith   PetscFunctionReturn(0);
89273d9f13SBarry Smith }
90273d9f13SBarry Smith 
914a2ae208SSatish Balay #undef __FUNCT__
92f69a0ea3SMatthew Knepley #define __FUNCT__ "MatSetSizes"
93f69a0ea3SMatthew Knepley /*@
94f69a0ea3SMatthew Knepley   MatSetSizes - Sets the local and global sizes, and checks to determine compatibility
95f69a0ea3SMatthew Knepley 
96f69a0ea3SMatthew Knepley   Collective on Mat
97f69a0ea3SMatthew Knepley 
98f69a0ea3SMatthew Knepley   Input Parameters:
99f69a0ea3SMatthew Knepley +  A - the matrix
100f69a0ea3SMatthew Knepley .  m - number of local rows (or PETSC_DECIDE)
101f69a0ea3SMatthew Knepley .  n - number of local columns (or PETSC_DECIDE)
102f69a0ea3SMatthew Knepley .  M - number of global rows (or PETSC_DETERMINE)
103f69a0ea3SMatthew Knepley -  N - number of global columns (or PETSC_DETERMINE)
104f69a0ea3SMatthew Knepley 
105f69a0ea3SMatthew Knepley    Notes:
106f69a0ea3SMatthew Knepley    m (n) and M (N) cannot be both PETSC_DECIDE
107f69a0ea3SMatthew Knepley    If one processor calls this with M (N) of PETSC_DECIDE then all processors must, otherwise the program will hang.
108f69a0ea3SMatthew Knepley 
109f69a0ea3SMatthew Knepley    If PETSC_DECIDE is not used for the arguments 'm' and 'n', then the
110f69a0ea3SMatthew Knepley    user must ensure that they are chosen to be compatible with the
111f69a0ea3SMatthew Knepley    vectors. To do this, one first considers the matrix-vector product
112f69a0ea3SMatthew Knepley    'y = A x'. The 'm' that is used in the above routine must match the
113f69a0ea3SMatthew Knepley    local size used in the vector creation routine VecCreateMPI() for 'y'.
114f69a0ea3SMatthew Knepley    Likewise, the 'n' used must match that used as the local size in
115f69a0ea3SMatthew Knepley    VecCreateMPI() for 'x'.
116f69a0ea3SMatthew Knepley 
117f69a0ea3SMatthew Knepley   Level: beginner
118f69a0ea3SMatthew Knepley 
119f69a0ea3SMatthew Knepley .seealso: MatGetSize(), PetscSplitOwnership()
120f69a0ea3SMatthew Knepley @*/
121f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatSetSizes(Mat A, PetscInt m, PetscInt n, PetscInt M, PetscInt N)
122f69a0ea3SMatthew Knepley {
123f69a0ea3SMatthew Knepley   PetscFunctionBegin;
124f69a0ea3SMatthew Knepley   PetscValidHeaderSpecific(A,MAT_COOKIE,1);
125f69a0ea3SMatthew Knepley   if (M > 0 && m > M) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local column size %D cannot be larger than global column size %D",m,M);
126f69a0ea3SMatthew Knepley   if (N > 0 && n > N) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local row size %D cannot be larger than global row size %D",n,N);
127f69a0ea3SMatthew Knepley   if ((A->m >= 0 || A->M >= 0) && (A->m != m || A->M != M)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset row sizes to %D local %D global after previously setting them to %D local %D global",m,M,A->m,A->M);
128f69a0ea3SMatthew Knepley   if ((A->n >= 0 || A->N >= 0) && (A->n != n || A->N != N)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset column sizes to %D local %D global after previously setting them to %D local %D global",n,N,A->n,A->N);
129f69a0ea3SMatthew Knepley   A->m = m;
130f69a0ea3SMatthew Knepley   A->n = n;
131f69a0ea3SMatthew Knepley   A->M = M;
132f69a0ea3SMatthew Knepley   A->N = N;
133f69a0ea3SMatthew Knepley   PetscFunctionReturn(0);
134f69a0ea3SMatthew Knepley }
135f69a0ea3SMatthew Knepley 
136f69a0ea3SMatthew Knepley #undef __FUNCT__
1374a2ae208SSatish Balay #define __FUNCT__ "MatSetFromOptions"
138*05869f15SSatish Balay /*@
139273d9f13SBarry Smith    MatSetFromOptions - Creates a matrix where the type is determined
140273d9f13SBarry Smith    from the options database. Generates a parallel MPI matrix if the
141273d9f13SBarry Smith    communicator has more than one processor.  The default matrix type is
1427e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() and MatCreateMPIAIJ() if
1437e5f4302SBarry Smith    you do not select a type in the options database.
144273d9f13SBarry Smith 
145273d9f13SBarry Smith    Collective on Mat
146273d9f13SBarry Smith 
147273d9f13SBarry Smith    Input Parameter:
148273d9f13SBarry Smith .  A - the matrix
149273d9f13SBarry Smith 
150273d9f13SBarry Smith    Options Database Keys:
151273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
152273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
153273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
154273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
155273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
156273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
157273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
158273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
159273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
160273d9f13SBarry Smith 
161273d9f13SBarry Smith    Even More Options Database Keys:
162273d9f13SBarry Smith    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
163273d9f13SBarry Smith    for additional format-specific options.
164bd9ce289SLois Curfman McInnes 
1651d69843bSLois Curfman McInnes    Level: beginner
1661d69843bSLois Curfman McInnes 
167dc401e71SLois Curfman McInnes .keywords: matrix, create
168e0b365e2SLois Curfman McInnes 
169fafbff53SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
170fafbff53SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
17139ddd567SLois Curfman McInnes           MatCreateSeqDense(), MatCreateMPIDense(),
172a209d233SLois Curfman McInnes           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
173a209d233SLois Curfman McInnes           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
174273d9f13SBarry Smith           MatConvert()
1757807a1faSBarry Smith @*/
176be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetFromOptions(Mat B)
1777807a1faSBarry Smith {
178dfbe8321SBarry Smith   PetscErrorCode ierr;
179273d9f13SBarry Smith   char           mtype[256];
180273d9f13SBarry Smith   PetscTruth     flg;
181dbb450caSBarry Smith 
1823a40ed3dSBarry Smith   PetscFunctionBegin;
183b0a32e0cSBarry Smith   ierr = PetscOptionsGetString(B->prefix,"-mat_type",mtype,256,&flg);CHKERRQ(ierr);
184273d9f13SBarry Smith   if (flg) {
185273d9f13SBarry Smith     ierr = MatSetType(B,mtype);CHKERRQ(ierr);
186273d9f13SBarry Smith   }
187273d9f13SBarry Smith   if (!B->type_name) {
18830735b05SKris Buschelman     ierr = MatSetType(B,MATAIJ);CHKERRQ(ierr);
189dfa27b74SSatish Balay   }
1903a40ed3dSBarry Smith   PetscFunctionReturn(0);
1917807a1faSBarry Smith }
1927807a1faSBarry Smith 
1934a2ae208SSatish Balay #undef __FUNCT__
1944a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation"
195273d9f13SBarry Smith /*@C
196273d9f13SBarry Smith    MatSetUpPreallocation
197dae03382SLois Curfman McInnes 
198273d9f13SBarry Smith    Collective on Mat
199dae03382SLois Curfman McInnes 
200273d9f13SBarry Smith    Input Parameter:
201273d9f13SBarry Smith .  A - the matrix
202d5d45c9bSBarry Smith 
203273d9f13SBarry Smith    Level: beginner
204d5d45c9bSBarry Smith 
205273d9f13SBarry Smith .keywords: matrix, create
206273d9f13SBarry Smith 
207273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
208273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
209273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
210273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
211273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
212273d9f13SBarry Smith           MatConvert()
213273d9f13SBarry Smith @*/
214be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetUpPreallocation(Mat B)
215273d9f13SBarry Smith {
216dfbe8321SBarry Smith   PetscErrorCode ierr;
217273d9f13SBarry Smith 
218273d9f13SBarry Smith   PetscFunctionBegin;
219273d9f13SBarry Smith   if (B->ops->setuppreallocation) {
22063ba0a88SBarry Smith     ierr = PetscLogInfo((B,"MatSetUpPreallocation: Warning not preallocating matrix storage\n"));CHKERRQ(ierr);
221273d9f13SBarry Smith     ierr = (*B->ops->setuppreallocation)(B);CHKERRQ(ierr);
222273d9f13SBarry Smith     B->ops->setuppreallocation = 0;
223273d9f13SBarry Smith     B->preallocated            = PETSC_TRUE;
224273d9f13SBarry Smith   }
225273d9f13SBarry Smith   PetscFunctionReturn(0);
226273d9f13SBarry Smith }
227273d9f13SBarry Smith 
228273d9f13SBarry Smith /*
229273d9f13SBarry Smith         Copies from Cs header to A
230273d9f13SBarry Smith */
2314a2ae208SSatish Balay #undef __FUNCT__
2324a2ae208SSatish Balay #define __FUNCT__ "MatHeaderCopy"
233dfbe8321SBarry Smith PetscErrorCode MatHeaderCopy(Mat A,Mat C)
234273d9f13SBarry Smith {
235dfbe8321SBarry Smith   PetscErrorCode ierr;
236d44834fbSBarry Smith   PetscInt       refct;
237273d9f13SBarry Smith   PetscOps       *Abops;
238273d9f13SBarry Smith   MatOps         Aops;
239273d9f13SBarry Smith   char           *mtype,*mname;
24030735b05SKris Buschelman   void           *spptr;
241273d9f13SBarry Smith 
242273d9f13SBarry Smith   PetscFunctionBegin;
243273d9f13SBarry Smith   /* free all the interior data structures from mat */
244273d9f13SBarry Smith   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
245273d9f13SBarry Smith 
2468a124369SBarry Smith   ierr = PetscMapDestroy(A->rmap);CHKERRQ(ierr);
2478a124369SBarry Smith   ierr = PetscMapDestroy(A->cmap);CHKERRQ(ierr);
248273d9f13SBarry Smith 
249273d9f13SBarry Smith   /* save the parts of A we need */
250273d9f13SBarry Smith   Abops = A->bops;
251273d9f13SBarry Smith   Aops  = A->ops;
252273d9f13SBarry Smith   refct = A->refct;
253273d9f13SBarry Smith   mtype = A->type_name;
254273d9f13SBarry Smith   mname = A->name;
25530735b05SKris Buschelman   spptr = A->spptr;
25630735b05SKris Buschelman 
25730735b05SKris Buschelman   if (C->spptr) {
25830735b05SKris Buschelman     ierr = PetscFree(C->spptr);CHKERRQ(ierr);
25930735b05SKris Buschelman     C->spptr = PETSC_NULL;
26030735b05SKris Buschelman   }
261273d9f13SBarry Smith 
262273d9f13SBarry Smith   /* copy C over to A */
263273d9f13SBarry Smith   ierr  = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
264273d9f13SBarry Smith 
265273d9f13SBarry Smith   /* return the parts of A we saved */
266273d9f13SBarry Smith   A->bops      = Abops;
267273d9f13SBarry Smith   A->ops       = Aops;
268273d9f13SBarry Smith   A->qlist     = 0;
269273d9f13SBarry Smith   A->refct     = refct;
270273d9f13SBarry Smith   A->type_name = mtype;
271273d9f13SBarry Smith   A->name      = mname;
27230735b05SKris Buschelman   A->spptr     = spptr;
273273d9f13SBarry Smith 
274d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(C);CHKERRQ(ierr);
275273d9f13SBarry Smith   PetscFunctionReturn(0);
276273d9f13SBarry Smith }
2778ab5b326SKris Buschelman /*
2788ab5b326SKris Buschelman         Replace A's header with that of C
2798ab5b326SKris Buschelman         This is essentially code moved from MatDestroy
2808ab5b326SKris Buschelman */
2818ab5b326SKris Buschelman #undef __FUNCT__
2828ab5b326SKris Buschelman #define __FUNCT__ "MatHeaderReplace"
2838ab5b326SKris Buschelman PetscErrorCode MatHeaderReplace(Mat A,Mat C)
2848ab5b326SKris Buschelman {
2858ab5b326SKris Buschelman   PetscErrorCode ierr;
2868ab5b326SKris Buschelman 
2878ab5b326SKris Buschelman   PetscFunctionBegin;
2888ab5b326SKris Buschelman   /* free all the interior data structures from mat */
2898ab5b326SKris Buschelman   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
290d2c95936SBarry Smith   ierr = PetscHeaderDestroy_Private((PetscObject)A);CHKERRQ(ierr);
291cb8bee85SHong Zhang   ierr = PetscMapDestroy(A->rmap);CHKERRQ(ierr);
292cb8bee85SHong Zhang   ierr = PetscMapDestroy(A->cmap);CHKERRQ(ierr);
2938ab5b326SKris Buschelman 
2948ab5b326SKris Buschelman   /* copy C over to A */
2958ab5b326SKris Buschelman   if (C) {
2968ab5b326SKris Buschelman     ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
2978ab5b326SKris Buschelman     ierr = PetscLogObjectDestroy((PetscObject)C);CHKERRQ(ierr);
2988ab5b326SKris Buschelman     ierr = PetscFree(C);CHKERRQ(ierr);
2998ab5b326SKris Buschelman   }
3008ab5b326SKris Buschelman   PetscFunctionReturn(0);
3018ab5b326SKris Buschelman }
302