xref: /petsc/src/mat/utils/gcreate.c (revision 9b5a856f60f98cab05cfa6d8e9a84d5a165873e6)
1be1d678aSKris Buschelman #define PETSCMAT_DLL
27807a1faSBarry Smith 
3273d9f13SBarry Smith #include "src/mat/matimpl.h"       /*I "petscmat.h"  I*/
4325e03aeSBarry Smith #include "petscsys.h"
57807a1faSBarry Smith 
64a2ae208SSatish Balay #undef __FUNCT__
74a2ae208SSatish Balay #define __FUNCT__ "MatPublish_Base"
86849ba73SBarry Smith static PetscErrorCode MatPublish_Base(PetscObject obj)
935d8aa7fSBarry Smith {
1035d8aa7fSBarry Smith   PetscFunctionBegin;
1135d8aa7fSBarry Smith   PetscFunctionReturn(0);
1235d8aa7fSBarry Smith }
1335d8aa7fSBarry Smith 
1435d8aa7fSBarry Smith 
154a2ae208SSatish Balay #undef __FUNCT__
164a2ae208SSatish Balay #define __FUNCT__ "MatCreate"
1705869f15SSatish Balay /*@
1869dd0797SLois Curfman McInnes    MatCreate - Creates a matrix where the type is determined
197e5f4302SBarry Smith    from either a call to MatSetType() or from the options database
207e5f4302SBarry Smith    with a call to MatSetFromOptions(). The default matrix type is
217e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() or MatCreateMPIAIJ()
227e5f4302SBarry Smith    if you do not set a type in the options database. If you never
237e5f4302SBarry Smith    call MatSetType() or MatSetFromOptions() it will generate an
24f8ab6608SSatish Balay    error when you try to use the matrix.
2583e1b59cSLois Curfman McInnes 
26cb13003dSBarry Smith    Collective on MPI_Comm
27cb13003dSBarry Smith 
28f69a0ea3SMatthew Knepley    Input Parameter:
29f69a0ea3SMatthew Knepley .  comm - MPI communicator
307807a1faSBarry Smith 
317807a1faSBarry Smith    Output Parameter:
32dc401e71SLois Curfman McInnes .  A - the matrix
33e0b365e2SLois Curfman McInnes 
34273d9f13SBarry Smith    Options Database Keys:
35273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
36273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
37273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
38273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
39273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
40273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
41273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
42273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
43273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
44e0b365e2SLois Curfman McInnes 
4583e1b59cSLois Curfman McInnes    Even More Options Database Keys:
4683e1b59cSLois Curfman McInnes    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
4783e1b59cSLois Curfman McInnes    for additional format-specific options.
48e0b365e2SLois Curfman McInnes 
49bd9ce289SLois Curfman McInnes    Notes:
50ec6e0d80SSatish Balay 
51273d9f13SBarry Smith    Level: beginner
52273d9f13SBarry Smith 
53a2fc510eSBarry Smith    User manual sections:
54a2fc510eSBarry Smith +   sec_matcreate
55a2fc510eSBarry Smith -   chapter_matrices
56a2fc510eSBarry Smith 
57273d9f13SBarry Smith .keywords: matrix, create
58273d9f13SBarry Smith 
59273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
60273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
61273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
62273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
63273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
64273d9f13SBarry Smith           MatConvert()
65273d9f13SBarry Smith @*/
66f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatCreate(MPI_Comm comm,Mat *A)
67273d9f13SBarry Smith {
68273d9f13SBarry Smith   Mat            B;
69dfbe8321SBarry Smith   PetscErrorCode ierr;
70273d9f13SBarry Smith 
71273d9f13SBarry Smith   PetscFunctionBegin;
72f69a0ea3SMatthew Knepley   PetscValidPointer(A,2);
7397f1f81fSBarry Smith 
748ba1e511SMatthew Knepley   *A = PETSC_NULL;
758ba1e511SMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
768ba1e511SMatthew Knepley   ierr = MatInitializePackage(PETSC_NULL);CHKERRQ(ierr);
778ba1e511SMatthew Knepley #endif
788ba1e511SMatthew Knepley 
7952e6d16bSBarry Smith   ierr = PetscHeaderCreate(B,_p_Mat,struct _MatOps,MAT_COOKIE,0,"Mat",comm,MatDestroy,MatView);CHKERRQ(ierr);
80899cda47SBarry Smith   B->rmap.n             = -1;
81899cda47SBarry Smith   B->rmap.N             = -1;
82899cda47SBarry Smith   B->cmap.n             = -1;
83899cda47SBarry Smith   B->cmap.N             = -1;
84899cda47SBarry Smith   B->rmap.bs            = 1;
85899cda47SBarry Smith   B->cmap.bs            = 1;
86273d9f13SBarry Smith   B->preallocated  = PETSC_FALSE;
8735d8aa7fSBarry Smith   B->bops->publish = MatPublish_Base;
88273d9f13SBarry Smith   *A               = B;
89273d9f13SBarry Smith   PetscFunctionReturn(0);
90273d9f13SBarry Smith }
91273d9f13SBarry Smith 
924a2ae208SSatish Balay #undef __FUNCT__
93f69a0ea3SMatthew Knepley #define __FUNCT__ "MatSetSizes"
94f69a0ea3SMatthew Knepley /*@
95f69a0ea3SMatthew Knepley   MatSetSizes - Sets the local and global sizes, and checks to determine compatibility
96f69a0ea3SMatthew Knepley 
97f69a0ea3SMatthew Knepley   Collective on Mat
98f69a0ea3SMatthew Knepley 
99f69a0ea3SMatthew Knepley   Input Parameters:
100f69a0ea3SMatthew Knepley +  A - the matrix
101f69a0ea3SMatthew Knepley .  m - number of local rows (or PETSC_DECIDE)
102f69a0ea3SMatthew Knepley .  n - number of local columns (or PETSC_DECIDE)
103f69a0ea3SMatthew Knepley .  M - number of global rows (or PETSC_DETERMINE)
104f69a0ea3SMatthew Knepley -  N - number of global columns (or PETSC_DETERMINE)
105f69a0ea3SMatthew Knepley 
106f69a0ea3SMatthew Knepley    Notes:
107f69a0ea3SMatthew Knepley    m (n) and M (N) cannot be both PETSC_DECIDE
108f69a0ea3SMatthew Knepley    If one processor calls this with M (N) of PETSC_DECIDE then all processors must, otherwise the program will hang.
109f69a0ea3SMatthew Knepley 
110f69a0ea3SMatthew Knepley    If PETSC_DECIDE is not used for the arguments 'm' and 'n', then the
111f69a0ea3SMatthew Knepley    user must ensure that they are chosen to be compatible with the
112f69a0ea3SMatthew Knepley    vectors. To do this, one first considers the matrix-vector product
113f69a0ea3SMatthew Knepley    'y = A x'. The 'm' that is used in the above routine must match the
114f69a0ea3SMatthew Knepley    local size used in the vector creation routine VecCreateMPI() for 'y'.
115f69a0ea3SMatthew Knepley    Likewise, the 'n' used must match that used as the local size in
116f69a0ea3SMatthew Knepley    VecCreateMPI() for 'x'.
117f69a0ea3SMatthew Knepley 
118f69a0ea3SMatthew Knepley   Level: beginner
119f69a0ea3SMatthew Knepley 
120f69a0ea3SMatthew Knepley .seealso: MatGetSize(), PetscSplitOwnership()
121f69a0ea3SMatthew Knepley @*/
122f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatSetSizes(Mat A, PetscInt m, PetscInt n, PetscInt M, PetscInt N)
123f69a0ea3SMatthew Knepley {
124284134d9SBarry Smith   PetscErrorCode ierr;
125284134d9SBarry Smith 
126f69a0ea3SMatthew Knepley   PetscFunctionBegin;
127f69a0ea3SMatthew Knepley   PetscValidHeaderSpecific(A,MAT_COOKIE,1);
128f69a0ea3SMatthew Knepley   if (M > 0 && m > M) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local column size %D cannot be larger than global column size %D",m,M);
129f69a0ea3SMatthew Knepley   if (N > 0 && n > N) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local row size %D cannot be larger than global row size %D",n,N);
130284134d9SBarry Smith   if (A->ops->setsizes) {
131284134d9SBarry Smith     /* Since this will not be set until the type has been set, this will NOT be called on the initial
132284134d9SBarry Smith        call of MatSetSizes() (which must be called BEFORE MatSetType() */
133284134d9SBarry Smith     ierr = (*A->ops->setsizes)(A,m,n,M,N);CHKERRQ(ierr);
134284134d9SBarry Smith   } else {
135899cda47SBarry Smith     if ((A->rmap.n >= 0 || A->rmap.N >= 0) && (A->rmap.n != m || A->rmap.N != M)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset row sizes to %D local %D global after previously setting them to %D local %D global",m,M,A->rmap.n,A->rmap.N);
136899cda47SBarry Smith     if ((A->cmap.n >= 0 || A->cmap.N >= 0) && (A->cmap.n != n || A->cmap.N != N)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset column sizes to %D local %D global after previously setting them to %D local %D global",n,N,A->cmap.n,A->cmap.N);
137284134d9SBarry Smith   }
138899cda47SBarry Smith   A->rmap.n = m;
139899cda47SBarry Smith   A->cmap.n = n;
140899cda47SBarry Smith   A->rmap.N = M;
141899cda47SBarry Smith   A->cmap.N = N;
142*9b5a856fSSatish Balay   /* also set rmap/cmap.bs here? */
143*9b5a856fSSatish Balay   ierr = PetscMapInitialize(A->comm,&A->rmap);CHKERRQ(ierr);
144*9b5a856fSSatish Balay   ierr = PetscMapInitialize(A->comm,&A->cmap);CHKERRQ(ierr);
145f69a0ea3SMatthew Knepley   PetscFunctionReturn(0);
146f69a0ea3SMatthew Knepley }
147f69a0ea3SMatthew Knepley 
148f69a0ea3SMatthew Knepley #undef __FUNCT__
1494a2ae208SSatish Balay #define __FUNCT__ "MatSetFromOptions"
15005869f15SSatish Balay /*@
151273d9f13SBarry Smith    MatSetFromOptions - Creates a matrix where the type is determined
152273d9f13SBarry Smith    from the options database. Generates a parallel MPI matrix if the
153273d9f13SBarry Smith    communicator has more than one processor.  The default matrix type is
1547e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() and MatCreateMPIAIJ() if
1557e5f4302SBarry Smith    you do not select a type in the options database.
156273d9f13SBarry Smith 
157273d9f13SBarry Smith    Collective on Mat
158273d9f13SBarry Smith 
159273d9f13SBarry Smith    Input Parameter:
160273d9f13SBarry Smith .  A - the matrix
161273d9f13SBarry Smith 
162273d9f13SBarry Smith    Options Database Keys:
163273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
164273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
165273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
166273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
167273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
168273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
169273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
170273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
171273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
172273d9f13SBarry Smith 
173273d9f13SBarry Smith    Even More Options Database Keys:
174273d9f13SBarry Smith    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
175273d9f13SBarry Smith    for additional format-specific options.
176bd9ce289SLois Curfman McInnes 
1771d69843bSLois Curfman McInnes    Level: beginner
1781d69843bSLois Curfman McInnes 
179dc401e71SLois Curfman McInnes .keywords: matrix, create
180e0b365e2SLois Curfman McInnes 
181fafbff53SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
182fafbff53SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
18339ddd567SLois Curfman McInnes           MatCreateSeqDense(), MatCreateMPIDense(),
184a209d233SLois Curfman McInnes           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
185a209d233SLois Curfman McInnes           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
186273d9f13SBarry Smith           MatConvert()
1877807a1faSBarry Smith @*/
188be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetFromOptions(Mat B)
1897807a1faSBarry Smith {
190dfbe8321SBarry Smith   PetscErrorCode ierr;
191273d9f13SBarry Smith   char           mtype[256];
192273d9f13SBarry Smith   PetscTruth     flg;
193dbb450caSBarry Smith 
1943a40ed3dSBarry Smith   PetscFunctionBegin;
195b0a32e0cSBarry Smith   ierr = PetscOptionsGetString(B->prefix,"-mat_type",mtype,256,&flg);CHKERRQ(ierr);
196273d9f13SBarry Smith   if (flg) {
197273d9f13SBarry Smith     ierr = MatSetType(B,mtype);CHKERRQ(ierr);
198273d9f13SBarry Smith   }
199273d9f13SBarry Smith   if (!B->type_name) {
20030735b05SKris Buschelman     ierr = MatSetType(B,MATAIJ);CHKERRQ(ierr);
201dfa27b74SSatish Balay   }
2023a40ed3dSBarry Smith   PetscFunctionReturn(0);
2037807a1faSBarry Smith }
2047807a1faSBarry Smith 
2054a2ae208SSatish Balay #undef __FUNCT__
2064a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation"
207273d9f13SBarry Smith /*@C
208273d9f13SBarry Smith    MatSetUpPreallocation
209dae03382SLois Curfman McInnes 
210273d9f13SBarry Smith    Collective on Mat
211dae03382SLois Curfman McInnes 
212273d9f13SBarry Smith    Input Parameter:
213273d9f13SBarry Smith .  A - the matrix
214d5d45c9bSBarry Smith 
215273d9f13SBarry Smith    Level: beginner
216d5d45c9bSBarry Smith 
217273d9f13SBarry Smith .keywords: matrix, create
218273d9f13SBarry Smith 
219273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
220273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
221273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
222273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
223273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
224273d9f13SBarry Smith           MatConvert()
225273d9f13SBarry Smith @*/
226be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetUpPreallocation(Mat B)
227273d9f13SBarry Smith {
228dfbe8321SBarry Smith   PetscErrorCode ierr;
229273d9f13SBarry Smith 
230273d9f13SBarry Smith   PetscFunctionBegin;
231273d9f13SBarry Smith   if (B->ops->setuppreallocation) {
232ae15b995SBarry Smith     ierr = PetscInfo(B,"Warning not preallocating matrix storage\n");CHKERRQ(ierr);
233273d9f13SBarry Smith     ierr = (*B->ops->setuppreallocation)(B);CHKERRQ(ierr);
234273d9f13SBarry Smith     B->ops->setuppreallocation = 0;
235273d9f13SBarry Smith   }
236210f0121SBarry Smith   B->preallocated = PETSC_TRUE;
237273d9f13SBarry Smith   PetscFunctionReturn(0);
238273d9f13SBarry Smith }
239273d9f13SBarry Smith 
240273d9f13SBarry Smith /*
241273d9f13SBarry Smith         Copies from Cs header to A
242273d9f13SBarry Smith */
2434a2ae208SSatish Balay #undef __FUNCT__
2444a2ae208SSatish Balay #define __FUNCT__ "MatHeaderCopy"
245dfbe8321SBarry Smith PetscErrorCode MatHeaderCopy(Mat A,Mat C)
246273d9f13SBarry Smith {
247dfbe8321SBarry Smith   PetscErrorCode ierr;
248d44834fbSBarry Smith   PetscInt       refct;
249273d9f13SBarry Smith   PetscOps       *Abops;
250273d9f13SBarry Smith   MatOps         Aops;
251273d9f13SBarry Smith   char           *mtype,*mname;
25230735b05SKris Buschelman   void           *spptr;
253273d9f13SBarry Smith 
254273d9f13SBarry Smith   PetscFunctionBegin;
255273d9f13SBarry Smith   /* free all the interior data structures from mat */
256273d9f13SBarry Smith   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
257273d9f13SBarry Smith 
258273d9f13SBarry Smith   /* save the parts of A we need */
259273d9f13SBarry Smith   Abops = A->bops;
260273d9f13SBarry Smith   Aops  = A->ops;
261273d9f13SBarry Smith   refct = A->refct;
262273d9f13SBarry Smith   mtype = A->type_name;
263273d9f13SBarry Smith   mname = A->name;
26430735b05SKris Buschelman   spptr = A->spptr;
26530735b05SKris Buschelman 
26630735b05SKris Buschelman   ierr = PetscFree(C->spptr);CHKERRQ(ierr);
26730735b05SKris Buschelman   C->spptr = PETSC_NULL;
26805b42c5fSBarry Smith 
269357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
270357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
271273d9f13SBarry Smith 
272273d9f13SBarry Smith   /* copy C over to A */
273273d9f13SBarry Smith   ierr  = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
274273d9f13SBarry Smith 
275273d9f13SBarry Smith   /* return the parts of A we saved */
276273d9f13SBarry Smith   A->bops      = Abops;
277273d9f13SBarry Smith   A->ops       = Aops;
278273d9f13SBarry Smith   A->qlist     = 0;
279273d9f13SBarry Smith   A->refct     = refct;
280273d9f13SBarry Smith   A->type_name = mtype;
281273d9f13SBarry Smith   A->name      = mname;
28230735b05SKris Buschelman   A->spptr     = spptr;
283273d9f13SBarry Smith 
284d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(C);CHKERRQ(ierr);
285273d9f13SBarry Smith   PetscFunctionReturn(0);
286273d9f13SBarry Smith }
2878ab5b326SKris Buschelman /*
2888ab5b326SKris Buschelman         Replace A's header with that of C
2898ab5b326SKris Buschelman         This is essentially code moved from MatDestroy
2908ab5b326SKris Buschelman */
2918ab5b326SKris Buschelman #undef __FUNCT__
2928ab5b326SKris Buschelman #define __FUNCT__ "MatHeaderReplace"
2938ab5b326SKris Buschelman PetscErrorCode MatHeaderReplace(Mat A,Mat C)
2948ab5b326SKris Buschelman {
2958ab5b326SKris Buschelman   PetscErrorCode ierr;
2968ab5b326SKris Buschelman 
2978ab5b326SKris Buschelman   PetscFunctionBegin;
2988ab5b326SKris Buschelman   /* free all the interior data structures from mat */
2998ab5b326SKris Buschelman   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
300d2c95936SBarry Smith   ierr = PetscHeaderDestroy_Private((PetscObject)A);CHKERRQ(ierr);
301357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
302357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
3038ab5b326SKris Buschelman 
3048ab5b326SKris Buschelman   /* copy C over to A */
3058ab5b326SKris Buschelman   if (C) {
3068ab5b326SKris Buschelman     ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
3078ab5b326SKris Buschelman     ierr = PetscLogObjectDestroy((PetscObject)C);CHKERRQ(ierr);
3088ab5b326SKris Buschelman     ierr = PetscFree(C);CHKERRQ(ierr);
3098ab5b326SKris Buschelman   }
3108ab5b326SKris Buschelman   PetscFunctionReturn(0);
3118ab5b326SKris Buschelman }
312