xref: /petsc/src/mat/utils/gcreate.c (revision bc08b0f146728b2b31190ed4a394ba48ffd204e8)
1be1d678aSKris Buschelman #define PETSCMAT_DLL
27807a1faSBarry Smith 
3b9147fbbSdalcinl #include "include/private/matimpl.h"       /*I "petscmat.h"  I*/
4325e03aeSBarry Smith #include "petscsys.h"
57807a1faSBarry Smith 
64a2ae208SSatish Balay #undef __FUNCT__
74a2ae208SSatish Balay #define __FUNCT__ "MatPublish_Base"
86849ba73SBarry Smith static PetscErrorCode MatPublish_Base(PetscObject obj)
935d8aa7fSBarry Smith {
1035d8aa7fSBarry Smith   PetscFunctionBegin;
1135d8aa7fSBarry Smith   PetscFunctionReturn(0);
1235d8aa7fSBarry Smith }
1335d8aa7fSBarry Smith 
1435d8aa7fSBarry Smith 
154a2ae208SSatish Balay #undef __FUNCT__
164a2ae208SSatish Balay #define __FUNCT__ "MatCreate"
1705869f15SSatish Balay /*@
1869dd0797SLois Curfman McInnes    MatCreate - Creates a matrix where the type is determined
197e5f4302SBarry Smith    from either a call to MatSetType() or from the options database
207e5f4302SBarry Smith    with a call to MatSetFromOptions(). The default matrix type is
217e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() or MatCreateMPIAIJ()
227e5f4302SBarry Smith    if you do not set a type in the options database. If you never
237e5f4302SBarry Smith    call MatSetType() or MatSetFromOptions() it will generate an
24f8ab6608SSatish Balay    error when you try to use the matrix.
2583e1b59cSLois Curfman McInnes 
26cb13003dSBarry Smith    Collective on MPI_Comm
27cb13003dSBarry Smith 
28f69a0ea3SMatthew Knepley    Input Parameter:
29f69a0ea3SMatthew Knepley .  comm - MPI communicator
307807a1faSBarry Smith 
317807a1faSBarry Smith    Output Parameter:
32dc401e71SLois Curfman McInnes .  A - the matrix
33e0b365e2SLois Curfman McInnes 
34273d9f13SBarry Smith    Options Database Keys:
35273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
36273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
37273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
38273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
39273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
40273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
41273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
42273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
43273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
44e0b365e2SLois Curfman McInnes 
4583e1b59cSLois Curfman McInnes    Even More Options Database Keys:
4683e1b59cSLois Curfman McInnes    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
4783e1b59cSLois Curfman McInnes    for additional format-specific options.
48e0b365e2SLois Curfman McInnes 
49bd9ce289SLois Curfman McInnes    Notes:
50ec6e0d80SSatish Balay 
51273d9f13SBarry Smith    Level: beginner
52273d9f13SBarry Smith 
53a2fc510eSBarry Smith    User manual sections:
54a2fc510eSBarry Smith +   sec_matcreate
55a2fc510eSBarry Smith -   chapter_matrices
56a2fc510eSBarry Smith 
57273d9f13SBarry Smith .keywords: matrix, create
58273d9f13SBarry Smith 
59cd05a4c0SHong Zhang .seealso: MatCreateSeqAIJ(), MatCreateMPIAIJ(),
60273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
61273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
62273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
63273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
64273d9f13SBarry Smith           MatConvert()
65273d9f13SBarry Smith @*/
66f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatCreate(MPI_Comm comm,Mat *A)
67273d9f13SBarry Smith {
68273d9f13SBarry Smith   Mat            B;
69dfbe8321SBarry Smith   PetscErrorCode ierr;
70273d9f13SBarry Smith 
71273d9f13SBarry Smith   PetscFunctionBegin;
72f69a0ea3SMatthew Knepley   PetscValidPointer(A,2);
7397f1f81fSBarry Smith 
748ba1e511SMatthew Knepley   *A = PETSC_NULL;
758ba1e511SMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
768ba1e511SMatthew Knepley   ierr = MatInitializePackage(PETSC_NULL);CHKERRQ(ierr);
778ba1e511SMatthew Knepley #endif
788ba1e511SMatthew Knepley 
7952e6d16bSBarry Smith   ierr = PetscHeaderCreate(B,_p_Mat,struct _MatOps,MAT_COOKIE,0,"Mat",comm,MatDestroy,MatView);CHKERRQ(ierr);
806148ca0dSBarry Smith   ierr = PetscMapInitialize(comm,&B->rmap);CHKERRQ(ierr);
816148ca0dSBarry Smith   ierr = PetscMapInitialize(comm,&B->cmap);CHKERRQ(ierr);
82273d9f13SBarry Smith   B->preallocated  = PETSC_FALSE;
8335d8aa7fSBarry Smith   B->bops->publish = MatPublish_Base;
84273d9f13SBarry Smith   *A               = B;
85273d9f13SBarry Smith   PetscFunctionReturn(0);
86273d9f13SBarry Smith }
87273d9f13SBarry Smith 
884a2ae208SSatish Balay #undef __FUNCT__
89f69a0ea3SMatthew Knepley #define __FUNCT__ "MatSetSizes"
90f69a0ea3SMatthew Knepley /*@
91f69a0ea3SMatthew Knepley   MatSetSizes - Sets the local and global sizes, and checks to determine compatibility
92f69a0ea3SMatthew Knepley 
93f69a0ea3SMatthew Knepley   Collective on Mat
94f69a0ea3SMatthew Knepley 
95f69a0ea3SMatthew Knepley   Input Parameters:
96f69a0ea3SMatthew Knepley +  A - the matrix
97f69a0ea3SMatthew Knepley .  m - number of local rows (or PETSC_DECIDE)
98f69a0ea3SMatthew Knepley .  n - number of local columns (or PETSC_DECIDE)
99f69a0ea3SMatthew Knepley .  M - number of global rows (or PETSC_DETERMINE)
100f69a0ea3SMatthew Knepley -  N - number of global columns (or PETSC_DETERMINE)
101f69a0ea3SMatthew Knepley 
102f69a0ea3SMatthew Knepley    Notes:
103f69a0ea3SMatthew Knepley    m (n) and M (N) cannot be both PETSC_DECIDE
104f69a0ea3SMatthew Knepley    If one processor calls this with M (N) of PETSC_DECIDE then all processors must, otherwise the program will hang.
105f69a0ea3SMatthew Knepley 
106f69a0ea3SMatthew Knepley    If PETSC_DECIDE is not used for the arguments 'm' and 'n', then the
107f69a0ea3SMatthew Knepley    user must ensure that they are chosen to be compatible with the
108f69a0ea3SMatthew Knepley    vectors. To do this, one first considers the matrix-vector product
109f69a0ea3SMatthew Knepley    'y = A x'. The 'm' that is used in the above routine must match the
110f69a0ea3SMatthew Knepley    local size used in the vector creation routine VecCreateMPI() for 'y'.
111f69a0ea3SMatthew Knepley    Likewise, the 'n' used must match that used as the local size in
112f69a0ea3SMatthew Knepley    VecCreateMPI() for 'x'.
113f69a0ea3SMatthew Knepley 
114f69a0ea3SMatthew Knepley   Level: beginner
115f69a0ea3SMatthew Knepley 
116f69a0ea3SMatthew Knepley .seealso: MatGetSize(), PetscSplitOwnership()
117f69a0ea3SMatthew Knepley @*/
118f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatSetSizes(Mat A, PetscInt m, PetscInt n, PetscInt M, PetscInt N)
119f69a0ea3SMatthew Knepley {
120284134d9SBarry Smith   PetscErrorCode ierr;
121284134d9SBarry Smith 
122f69a0ea3SMatthew Knepley   PetscFunctionBegin;
123f69a0ea3SMatthew Knepley   PetscValidHeaderSpecific(A,MAT_COOKIE,1);
124f69a0ea3SMatthew Knepley   if (M > 0 && m > M) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local column size %D cannot be larger than global column size %D",m,M);
125f69a0ea3SMatthew Knepley   if (N > 0 && n > N) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local row size %D cannot be larger than global row size %D",n,N);
126284134d9SBarry Smith   if (A->ops->setsizes) {
127284134d9SBarry Smith     /* Since this will not be set until the type has been set, this will NOT be called on the initial
128284134d9SBarry Smith        call of MatSetSizes() (which must be called BEFORE MatSetType() */
129284134d9SBarry Smith     ierr = (*A->ops->setsizes)(A,m,n,M,N);CHKERRQ(ierr);
130284134d9SBarry Smith   } else {
131899cda47SBarry Smith     if ((A->rmap.n >= 0 || A->rmap.N >= 0) && (A->rmap.n != m || A->rmap.N != M)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset row sizes to %D local %D global after previously setting them to %D local %D global",m,M,A->rmap.n,A->rmap.N);
132899cda47SBarry Smith     if ((A->cmap.n >= 0 || A->cmap.N >= 0) && (A->cmap.n != n || A->cmap.N != N)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset column sizes to %D local %D global after previously setting them to %D local %D global",n,N,A->cmap.n,A->cmap.N);
133284134d9SBarry Smith   }
134899cda47SBarry Smith   A->rmap.n = m;
135899cda47SBarry Smith   A->cmap.n = n;
136899cda47SBarry Smith   A->rmap.N = M;
137899cda47SBarry Smith   A->cmap.N = N;
138f69a0ea3SMatthew Knepley   PetscFunctionReturn(0);
139f69a0ea3SMatthew Knepley }
140f69a0ea3SMatthew Knepley 
141f69a0ea3SMatthew Knepley #undef __FUNCT__
1424a2ae208SSatish Balay #define __FUNCT__ "MatSetFromOptions"
14305869f15SSatish Balay /*@
144273d9f13SBarry Smith    MatSetFromOptions - Creates a matrix where the type is determined
145273d9f13SBarry Smith    from the options database. Generates a parallel MPI matrix if the
146273d9f13SBarry Smith    communicator has more than one processor.  The default matrix type is
1477e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() and MatCreateMPIAIJ() if
1487e5f4302SBarry Smith    you do not select a type in the options database.
149273d9f13SBarry Smith 
150273d9f13SBarry Smith    Collective on Mat
151273d9f13SBarry Smith 
152273d9f13SBarry Smith    Input Parameter:
153273d9f13SBarry Smith .  A - the matrix
154273d9f13SBarry Smith 
155273d9f13SBarry Smith    Options Database Keys:
156273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
157273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
158273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
159273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
160273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
161273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
162273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
163273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
164273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
165273d9f13SBarry Smith 
166273d9f13SBarry Smith    Even More Options Database Keys:
167273d9f13SBarry Smith    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
168273d9f13SBarry Smith    for additional format-specific options.
169bd9ce289SLois Curfman McInnes 
1701d69843bSLois Curfman McInnes    Level: beginner
1711d69843bSLois Curfman McInnes 
172dc401e71SLois Curfman McInnes .keywords: matrix, create
173e0b365e2SLois Curfman McInnes 
174fafbff53SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
175fafbff53SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
17639ddd567SLois Curfman McInnes           MatCreateSeqDense(), MatCreateMPIDense(),
177a209d233SLois Curfman McInnes           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
178a209d233SLois Curfman McInnes           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
179273d9f13SBarry Smith           MatConvert()
1807807a1faSBarry Smith @*/
181be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetFromOptions(Mat B)
1827807a1faSBarry Smith {
183dfbe8321SBarry Smith   PetscErrorCode ierr;
184273d9f13SBarry Smith   char           mtype[256];
185273d9f13SBarry Smith   PetscTruth     flg;
186dbb450caSBarry Smith 
1873a40ed3dSBarry Smith   PetscFunctionBegin;
188b0a32e0cSBarry Smith   ierr = PetscOptionsGetString(B->prefix,"-mat_type",mtype,256,&flg);CHKERRQ(ierr);
189273d9f13SBarry Smith   if (flg) {
190273d9f13SBarry Smith     ierr = MatSetType(B,mtype);CHKERRQ(ierr);
191273d9f13SBarry Smith   }
192593c1905SSatish Balay   if (!B->type_name) {
193593c1905SSatish Balay     ierr = MatSetType(B,MATAIJ);CHKERRQ(ierr);
194593c1905SSatish Balay   }
1953a40ed3dSBarry Smith   PetscFunctionReturn(0);
1967807a1faSBarry Smith }
1977807a1faSBarry Smith 
1984a2ae208SSatish Balay #undef __FUNCT__
1994a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation"
200*bc08b0f1SBarry Smith /*@
201273d9f13SBarry Smith    MatSetUpPreallocation
202dae03382SLois Curfman McInnes 
203273d9f13SBarry Smith    Collective on Mat
204dae03382SLois Curfman McInnes 
205273d9f13SBarry Smith    Input Parameter:
206273d9f13SBarry Smith .  A - the matrix
207d5d45c9bSBarry Smith 
208273d9f13SBarry Smith    Level: beginner
209d5d45c9bSBarry Smith 
210273d9f13SBarry Smith .keywords: matrix, create
211273d9f13SBarry Smith 
212273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
213273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
214273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
215273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
216273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
217273d9f13SBarry Smith           MatConvert()
218273d9f13SBarry Smith @*/
219be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetUpPreallocation(Mat B)
220273d9f13SBarry Smith {
221dfbe8321SBarry Smith   PetscErrorCode ierr;
222273d9f13SBarry Smith 
223273d9f13SBarry Smith   PetscFunctionBegin;
22417667f90SBarry Smith   if (!B->preallocated && B->ops->setuppreallocation) {
225ae15b995SBarry Smith     ierr = PetscInfo(B,"Warning not preallocating matrix storage\n");CHKERRQ(ierr);
226273d9f13SBarry Smith     ierr = (*B->ops->setuppreallocation)(B);CHKERRQ(ierr);
227273d9f13SBarry Smith   }
228210f0121SBarry Smith   B->preallocated = PETSC_TRUE;
229273d9f13SBarry Smith   PetscFunctionReturn(0);
230273d9f13SBarry Smith }
231273d9f13SBarry Smith 
232273d9f13SBarry Smith /*
233273d9f13SBarry Smith         Copies from Cs header to A
234273d9f13SBarry Smith */
2354a2ae208SSatish Balay #undef __FUNCT__
2364a2ae208SSatish Balay #define __FUNCT__ "MatHeaderCopy"
237dfbe8321SBarry Smith PetscErrorCode MatHeaderCopy(Mat A,Mat C)
238273d9f13SBarry Smith {
239dfbe8321SBarry Smith   PetscErrorCode ierr;
240d44834fbSBarry Smith   PetscInt       refct;
241273d9f13SBarry Smith   PetscOps       *Abops;
242273d9f13SBarry Smith   MatOps         Aops;
243273d9f13SBarry Smith   char           *mtype,*mname;
24430735b05SKris Buschelman   void           *spptr;
245273d9f13SBarry Smith 
246273d9f13SBarry Smith   PetscFunctionBegin;
247273d9f13SBarry Smith   /* save the parts of A we need */
248273d9f13SBarry Smith   Abops = A->bops;
249273d9f13SBarry Smith   Aops  = A->ops;
250273d9f13SBarry Smith   refct = A->refct;
2517c99f97cSSatish Balay   mtype = A->type_name; A->type_name = 0;
2527c99f97cSSatish Balay   mname = A->name; A->name = 0;
25330735b05SKris Buschelman   spptr = A->spptr;
25430735b05SKris Buschelman 
2557c99f97cSSatish Balay   /* free all the interior data structures from mat */
2567c99f97cSSatish Balay   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
2577c99f97cSSatish Balay 
25830735b05SKris Buschelman   ierr = PetscFree(C->spptr);CHKERRQ(ierr);
25905b42c5fSBarry Smith 
260357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
261357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
262273d9f13SBarry Smith 
263273d9f13SBarry Smith   /* copy C over to A */
264273d9f13SBarry Smith   ierr  = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
265273d9f13SBarry Smith 
266273d9f13SBarry Smith   /* return the parts of A we saved */
267273d9f13SBarry Smith   A->bops      = Abops;
268273d9f13SBarry Smith   A->ops       = Aops;
269273d9f13SBarry Smith   A->qlist     = 0;
270273d9f13SBarry Smith   A->refct     = refct;
271273d9f13SBarry Smith   A->type_name = mtype;
272273d9f13SBarry Smith   A->name      = mname;
27330735b05SKris Buschelman   A->spptr     = spptr;
274273d9f13SBarry Smith 
275d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(C);CHKERRQ(ierr);
276273d9f13SBarry Smith   PetscFunctionReturn(0);
277273d9f13SBarry Smith }
2788ab5b326SKris Buschelman /*
2798ab5b326SKris Buschelman         Replace A's header with that of C
2808ab5b326SKris Buschelman         This is essentially code moved from MatDestroy
2818ab5b326SKris Buschelman */
2828ab5b326SKris Buschelman #undef __FUNCT__
2838ab5b326SKris Buschelman #define __FUNCT__ "MatHeaderReplace"
2848ab5b326SKris Buschelman PetscErrorCode MatHeaderReplace(Mat A,Mat C)
2858ab5b326SKris Buschelman {
2868ab5b326SKris Buschelman   PetscErrorCode ierr;
2878ab5b326SKris Buschelman 
2888ab5b326SKris Buschelman   PetscFunctionBegin;
2898ab5b326SKris Buschelman   /* free all the interior data structures from mat */
2908ab5b326SKris Buschelman   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
291d2c95936SBarry Smith   ierr = PetscHeaderDestroy_Private((PetscObject)A);CHKERRQ(ierr);
292357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
293357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
294d95db058SSatish Balay   ierr = PetscFree(A->spptr);CHKERRQ(ierr);
2958ab5b326SKris Buschelman 
2968ab5b326SKris Buschelman   /* copy C over to A */
2978ab5b326SKris Buschelman   if (C) {
2988ab5b326SKris Buschelman     ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
2998ab5b326SKris Buschelman     ierr = PetscLogObjectDestroy((PetscObject)C);CHKERRQ(ierr);
3008ab5b326SKris Buschelman     ierr = PetscFree(C);CHKERRQ(ierr);
3018ab5b326SKris Buschelman   }
3028ab5b326SKris Buschelman   PetscFunctionReturn(0);
3038ab5b326SKris Buschelman }
304