xref: /petsc/src/mat/utils/gcreate.c (revision d95db058ab89c3a8df713eb378104387bd0cf61c)
1be1d678aSKris Buschelman #define PETSCMAT_DLL
27807a1faSBarry Smith 
3273d9f13SBarry Smith #include "src/mat/matimpl.h"       /*I "petscmat.h"  I*/
4325e03aeSBarry Smith #include "petscsys.h"
57807a1faSBarry Smith 
64a2ae208SSatish Balay #undef __FUNCT__
74a2ae208SSatish Balay #define __FUNCT__ "MatPublish_Base"
86849ba73SBarry Smith static PetscErrorCode MatPublish_Base(PetscObject obj)
935d8aa7fSBarry Smith {
1035d8aa7fSBarry Smith   PetscFunctionBegin;
1135d8aa7fSBarry Smith   PetscFunctionReturn(0);
1235d8aa7fSBarry Smith }
1335d8aa7fSBarry Smith 
1435d8aa7fSBarry Smith 
154a2ae208SSatish Balay #undef __FUNCT__
164a2ae208SSatish Balay #define __FUNCT__ "MatCreate"
1705869f15SSatish Balay /*@
1869dd0797SLois Curfman McInnes    MatCreate - Creates a matrix where the type is determined
197e5f4302SBarry Smith    from either a call to MatSetType() or from the options database
207e5f4302SBarry Smith    with a call to MatSetFromOptions(). The default matrix type is
217e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() or MatCreateMPIAIJ()
227e5f4302SBarry Smith    if you do not set a type in the options database. If you never
237e5f4302SBarry Smith    call MatSetType() or MatSetFromOptions() it will generate an
24f8ab6608SSatish Balay    error when you try to use the matrix.
2583e1b59cSLois Curfman McInnes 
26cb13003dSBarry Smith    Collective on MPI_Comm
27cb13003dSBarry Smith 
28f69a0ea3SMatthew Knepley    Input Parameter:
29f69a0ea3SMatthew Knepley .  comm - MPI communicator
307807a1faSBarry Smith 
317807a1faSBarry Smith    Output Parameter:
32dc401e71SLois Curfman McInnes .  A - the matrix
33e0b365e2SLois Curfman McInnes 
34273d9f13SBarry Smith    Options Database Keys:
35273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
36273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
37273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
38273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
39273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
40273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
41273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
42273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
43273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
44e0b365e2SLois Curfman McInnes 
4583e1b59cSLois Curfman McInnes    Even More Options Database Keys:
4683e1b59cSLois Curfman McInnes    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
4783e1b59cSLois Curfman McInnes    for additional format-specific options.
48e0b365e2SLois Curfman McInnes 
49bd9ce289SLois Curfman McInnes    Notes:
50ec6e0d80SSatish Balay 
51273d9f13SBarry Smith    Level: beginner
52273d9f13SBarry Smith 
53a2fc510eSBarry Smith    User manual sections:
54a2fc510eSBarry Smith +   sec_matcreate
55a2fc510eSBarry Smith -   chapter_matrices
56a2fc510eSBarry Smith 
57273d9f13SBarry Smith .keywords: matrix, create
58273d9f13SBarry Smith 
59273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
60273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
61273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
62273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
63273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
64273d9f13SBarry Smith           MatConvert()
65273d9f13SBarry Smith @*/
66f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatCreate(MPI_Comm comm,Mat *A)
67273d9f13SBarry Smith {
68273d9f13SBarry Smith   Mat            B;
69dfbe8321SBarry Smith   PetscErrorCode ierr;
70273d9f13SBarry Smith 
71273d9f13SBarry Smith   PetscFunctionBegin;
72f69a0ea3SMatthew Knepley   PetscValidPointer(A,2);
7397f1f81fSBarry Smith 
748ba1e511SMatthew Knepley   *A = PETSC_NULL;
758ba1e511SMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
768ba1e511SMatthew Knepley   ierr = MatInitializePackage(PETSC_NULL);CHKERRQ(ierr);
778ba1e511SMatthew Knepley #endif
788ba1e511SMatthew Knepley 
7952e6d16bSBarry Smith   ierr = PetscHeaderCreate(B,_p_Mat,struct _MatOps,MAT_COOKIE,0,"Mat",comm,MatDestroy,MatView);CHKERRQ(ierr);
80899cda47SBarry Smith   B->rmap.n             = -1;
81899cda47SBarry Smith   B->rmap.N             = -1;
82899cda47SBarry Smith   B->cmap.n             = -1;
83899cda47SBarry Smith   B->cmap.N             = -1;
84899cda47SBarry Smith   B->rmap.bs            = 1;
85899cda47SBarry Smith   B->cmap.bs            = 1;
86273d9f13SBarry Smith   B->preallocated  = PETSC_FALSE;
8735d8aa7fSBarry Smith   B->bops->publish = MatPublish_Base;
88273d9f13SBarry Smith   *A               = B;
89273d9f13SBarry Smith   PetscFunctionReturn(0);
90273d9f13SBarry Smith }
91273d9f13SBarry Smith 
924a2ae208SSatish Balay #undef __FUNCT__
93f69a0ea3SMatthew Knepley #define __FUNCT__ "MatSetSizes"
94f69a0ea3SMatthew Knepley /*@
95f69a0ea3SMatthew Knepley   MatSetSizes - Sets the local and global sizes, and checks to determine compatibility
96f69a0ea3SMatthew Knepley 
97f69a0ea3SMatthew Knepley   Collective on Mat
98f69a0ea3SMatthew Knepley 
99f69a0ea3SMatthew Knepley   Input Parameters:
100f69a0ea3SMatthew Knepley +  A - the matrix
101f69a0ea3SMatthew Knepley .  m - number of local rows (or PETSC_DECIDE)
102f69a0ea3SMatthew Knepley .  n - number of local columns (or PETSC_DECIDE)
103f69a0ea3SMatthew Knepley .  M - number of global rows (or PETSC_DETERMINE)
104f69a0ea3SMatthew Knepley -  N - number of global columns (or PETSC_DETERMINE)
105f69a0ea3SMatthew Knepley 
106f69a0ea3SMatthew Knepley    Notes:
107f69a0ea3SMatthew Knepley    m (n) and M (N) cannot be both PETSC_DECIDE
108f69a0ea3SMatthew Knepley    If one processor calls this with M (N) of PETSC_DECIDE then all processors must, otherwise the program will hang.
109f69a0ea3SMatthew Knepley 
110f69a0ea3SMatthew Knepley    If PETSC_DECIDE is not used for the arguments 'm' and 'n', then the
111f69a0ea3SMatthew Knepley    user must ensure that they are chosen to be compatible with the
112f69a0ea3SMatthew Knepley    vectors. To do this, one first considers the matrix-vector product
113f69a0ea3SMatthew Knepley    'y = A x'. The 'm' that is used in the above routine must match the
114f69a0ea3SMatthew Knepley    local size used in the vector creation routine VecCreateMPI() for 'y'.
115f69a0ea3SMatthew Knepley    Likewise, the 'n' used must match that used as the local size in
116f69a0ea3SMatthew Knepley    VecCreateMPI() for 'x'.
117f69a0ea3SMatthew Knepley 
118f69a0ea3SMatthew Knepley   Level: beginner
119f69a0ea3SMatthew Knepley 
120f69a0ea3SMatthew Knepley .seealso: MatGetSize(), PetscSplitOwnership()
121f69a0ea3SMatthew Knepley @*/
122f69a0ea3SMatthew Knepley PetscErrorCode PETSCMAT_DLLEXPORT MatSetSizes(Mat A, PetscInt m, PetscInt n, PetscInt M, PetscInt N)
123f69a0ea3SMatthew Knepley {
124284134d9SBarry Smith   PetscErrorCode ierr;
125284134d9SBarry Smith 
126f69a0ea3SMatthew Knepley   PetscFunctionBegin;
127f69a0ea3SMatthew Knepley   PetscValidHeaderSpecific(A,MAT_COOKIE,1);
128f69a0ea3SMatthew Knepley   if (M > 0 && m > M) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local column size %D cannot be larger than global column size %D",m,M);
129f69a0ea3SMatthew Knepley   if (N > 0 && n > N) SETERRQ2(PETSC_ERR_ARG_INCOMP,"Local row size %D cannot be larger than global row size %D",n,N);
130284134d9SBarry Smith   if (A->ops->setsizes) {
131284134d9SBarry Smith     /* Since this will not be set until the type has been set, this will NOT be called on the initial
132284134d9SBarry Smith        call of MatSetSizes() (which must be called BEFORE MatSetType() */
133284134d9SBarry Smith     ierr = (*A->ops->setsizes)(A,m,n,M,N);CHKERRQ(ierr);
134284134d9SBarry Smith   } else {
135899cda47SBarry Smith     if ((A->rmap.n >= 0 || A->rmap.N >= 0) && (A->rmap.n != m || A->rmap.N != M)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset row sizes to %D local %D global after previously setting them to %D local %D global",m,M,A->rmap.n,A->rmap.N);
136899cda47SBarry Smith     if ((A->cmap.n >= 0 || A->cmap.N >= 0) && (A->cmap.n != n || A->cmap.N != N)) SETERRQ4(PETSC_ERR_SUP,"Cannot change/reset column sizes to %D local %D global after previously setting them to %D local %D global",n,N,A->cmap.n,A->cmap.N);
137284134d9SBarry Smith   }
138899cda47SBarry Smith   A->rmap.n = m;
139899cda47SBarry Smith   A->cmap.n = n;
140899cda47SBarry Smith   A->rmap.N = M;
141899cda47SBarry Smith   A->cmap.N = N;
1429b5a856fSSatish Balay   /* also set rmap/cmap.bs here? */
143*d95db058SSatish Balay   /*
1449b5a856fSSatish Balay   ierr = PetscMapInitialize(A->comm,&A->rmap);CHKERRQ(ierr);
1459b5a856fSSatish Balay   ierr = PetscMapInitialize(A->comm,&A->cmap);CHKERRQ(ierr);
146*d95db058SSatish Balay   */
147f69a0ea3SMatthew Knepley   PetscFunctionReturn(0);
148f69a0ea3SMatthew Knepley }
149f69a0ea3SMatthew Knepley 
150f69a0ea3SMatthew Knepley #undef __FUNCT__
1514a2ae208SSatish Balay #define __FUNCT__ "MatSetFromOptions"
15205869f15SSatish Balay /*@
153273d9f13SBarry Smith    MatSetFromOptions - Creates a matrix where the type is determined
154273d9f13SBarry Smith    from the options database. Generates a parallel MPI matrix if the
155273d9f13SBarry Smith    communicator has more than one processor.  The default matrix type is
1567e5f4302SBarry Smith    AIJ, using the routines MatCreateSeqAIJ() and MatCreateMPIAIJ() if
1577e5f4302SBarry Smith    you do not select a type in the options database.
158273d9f13SBarry Smith 
159273d9f13SBarry Smith    Collective on Mat
160273d9f13SBarry Smith 
161273d9f13SBarry Smith    Input Parameter:
162273d9f13SBarry Smith .  A - the matrix
163273d9f13SBarry Smith 
164273d9f13SBarry Smith    Options Database Keys:
165273d9f13SBarry Smith +    -mat_type seqaij   - AIJ type, uses MatCreateSeqAIJ()
166273d9f13SBarry Smith .    -mat_type mpiaij   - AIJ type, uses MatCreateMPIAIJ()
167273d9f13SBarry Smith .    -mat_type seqbdiag - block diagonal type, uses MatCreateSeqBDiag()
168273d9f13SBarry Smith .    -mat_type mpibdiag - block diagonal type, uses MatCreateMPIBDiag()
169273d9f13SBarry Smith .    -mat_type mpirowbs - rowbs type, uses MatCreateMPIRowbs()
170273d9f13SBarry Smith .    -mat_type seqdense - dense type, uses MatCreateSeqDense()
171273d9f13SBarry Smith .    -mat_type mpidense - dense type, uses MatCreateMPIDense()
172273d9f13SBarry Smith .    -mat_type seqbaij  - block AIJ type, uses MatCreateSeqBAIJ()
173273d9f13SBarry Smith -    -mat_type mpibaij  - block AIJ type, uses MatCreateMPIBAIJ()
174273d9f13SBarry Smith 
175273d9f13SBarry Smith    Even More Options Database Keys:
176273d9f13SBarry Smith    See the manpages for particular formats (e.g., MatCreateSeqAIJ())
177273d9f13SBarry Smith    for additional format-specific options.
178bd9ce289SLois Curfman McInnes 
1791d69843bSLois Curfman McInnes    Level: beginner
1801d69843bSLois Curfman McInnes 
181dc401e71SLois Curfman McInnes .keywords: matrix, create
182e0b365e2SLois Curfman McInnes 
183fafbff53SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
184fafbff53SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
18539ddd567SLois Curfman McInnes           MatCreateSeqDense(), MatCreateMPIDense(),
186a209d233SLois Curfman McInnes           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
187a209d233SLois Curfman McInnes           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
188273d9f13SBarry Smith           MatConvert()
1897807a1faSBarry Smith @*/
190be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetFromOptions(Mat B)
1917807a1faSBarry Smith {
192dfbe8321SBarry Smith   PetscErrorCode ierr;
193273d9f13SBarry Smith   char           mtype[256];
194273d9f13SBarry Smith   PetscTruth     flg;
195dbb450caSBarry Smith 
1963a40ed3dSBarry Smith   PetscFunctionBegin;
197b0a32e0cSBarry Smith   ierr = PetscOptionsGetString(B->prefix,"-mat_type",mtype,256,&flg);CHKERRQ(ierr);
198273d9f13SBarry Smith   if (flg) {
199273d9f13SBarry Smith     ierr = MatSetType(B,mtype);CHKERRQ(ierr);
200273d9f13SBarry Smith   }
201273d9f13SBarry Smith   if (!B->type_name) {
20230735b05SKris Buschelman     ierr = MatSetType(B,MATAIJ);CHKERRQ(ierr);
203dfa27b74SSatish Balay   }
2043a40ed3dSBarry Smith   PetscFunctionReturn(0);
2057807a1faSBarry Smith }
2067807a1faSBarry Smith 
2074a2ae208SSatish Balay #undef __FUNCT__
2084a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation"
209273d9f13SBarry Smith /*@C
210273d9f13SBarry Smith    MatSetUpPreallocation
211dae03382SLois Curfman McInnes 
212273d9f13SBarry Smith    Collective on Mat
213dae03382SLois Curfman McInnes 
214273d9f13SBarry Smith    Input Parameter:
215273d9f13SBarry Smith .  A - the matrix
216d5d45c9bSBarry Smith 
217273d9f13SBarry Smith    Level: beginner
218d5d45c9bSBarry Smith 
219273d9f13SBarry Smith .keywords: matrix, create
220273d9f13SBarry Smith 
221273d9f13SBarry Smith .seealso: MatCreateSeqAIJ((), MatCreateMPIAIJ(),
222273d9f13SBarry Smith           MatCreateSeqBDiag(),MatCreateMPIBDiag(),
223273d9f13SBarry Smith           MatCreateSeqDense(), MatCreateMPIDense(),
224273d9f13SBarry Smith           MatCreateMPIRowbs(), MatCreateSeqBAIJ(), MatCreateMPIBAIJ(),
225273d9f13SBarry Smith           MatCreateSeqSBAIJ(), MatCreateMPISBAIJ(),
226273d9f13SBarry Smith           MatConvert()
227273d9f13SBarry Smith @*/
228be1d678aSKris Buschelman PetscErrorCode PETSCMAT_DLLEXPORT MatSetUpPreallocation(Mat B)
229273d9f13SBarry Smith {
230dfbe8321SBarry Smith   PetscErrorCode ierr;
231273d9f13SBarry Smith 
232273d9f13SBarry Smith   PetscFunctionBegin;
233273d9f13SBarry Smith   if (B->ops->setuppreallocation) {
234ae15b995SBarry Smith     ierr = PetscInfo(B,"Warning not preallocating matrix storage\n");CHKERRQ(ierr);
235273d9f13SBarry Smith     ierr = (*B->ops->setuppreallocation)(B);CHKERRQ(ierr);
236273d9f13SBarry Smith     B->ops->setuppreallocation = 0;
237273d9f13SBarry Smith   }
238210f0121SBarry Smith   B->preallocated = PETSC_TRUE;
239273d9f13SBarry Smith   PetscFunctionReturn(0);
240273d9f13SBarry Smith }
241273d9f13SBarry Smith 
242273d9f13SBarry Smith /*
243273d9f13SBarry Smith         Copies from Cs header to A
244273d9f13SBarry Smith */
2454a2ae208SSatish Balay #undef __FUNCT__
2464a2ae208SSatish Balay #define __FUNCT__ "MatHeaderCopy"
247dfbe8321SBarry Smith PetscErrorCode MatHeaderCopy(Mat A,Mat C)
248273d9f13SBarry Smith {
249dfbe8321SBarry Smith   PetscErrorCode ierr;
250d44834fbSBarry Smith   PetscInt       refct;
251273d9f13SBarry Smith   PetscOps       *Abops;
252273d9f13SBarry Smith   MatOps         Aops;
253273d9f13SBarry Smith   char           *mtype,*mname;
25430735b05SKris Buschelman   void           *spptr;
255273d9f13SBarry Smith 
256273d9f13SBarry Smith   PetscFunctionBegin;
257273d9f13SBarry Smith   /* free all the interior data structures from mat */
258273d9f13SBarry Smith   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
259273d9f13SBarry Smith 
260273d9f13SBarry Smith   /* save the parts of A we need */
261273d9f13SBarry Smith   Abops = A->bops;
262273d9f13SBarry Smith   Aops  = A->ops;
263273d9f13SBarry Smith   refct = A->refct;
264273d9f13SBarry Smith   mtype = A->type_name;
265273d9f13SBarry Smith   mname = A->name;
26630735b05SKris Buschelman   spptr = A->spptr;
26730735b05SKris Buschelman 
26830735b05SKris Buschelman   ierr = PetscFree(C->spptr);CHKERRQ(ierr);
26905b42c5fSBarry Smith 
270357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
271357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
272273d9f13SBarry Smith 
273273d9f13SBarry Smith   /* copy C over to A */
274273d9f13SBarry Smith   ierr  = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
275273d9f13SBarry Smith 
276273d9f13SBarry Smith   /* return the parts of A we saved */
277273d9f13SBarry Smith   A->bops      = Abops;
278273d9f13SBarry Smith   A->ops       = Aops;
279273d9f13SBarry Smith   A->qlist     = 0;
280273d9f13SBarry Smith   A->refct     = refct;
281273d9f13SBarry Smith   A->type_name = mtype;
282273d9f13SBarry Smith   A->name      = mname;
28330735b05SKris Buschelman   A->spptr     = spptr;
284273d9f13SBarry Smith 
285d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(C);CHKERRQ(ierr);
286273d9f13SBarry Smith   PetscFunctionReturn(0);
287273d9f13SBarry Smith }
2888ab5b326SKris Buschelman /*
2898ab5b326SKris Buschelman         Replace A's header with that of C
2908ab5b326SKris Buschelman         This is essentially code moved from MatDestroy
2918ab5b326SKris Buschelman */
2928ab5b326SKris Buschelman #undef __FUNCT__
2938ab5b326SKris Buschelman #define __FUNCT__ "MatHeaderReplace"
2948ab5b326SKris Buschelman PetscErrorCode MatHeaderReplace(Mat A,Mat C)
2958ab5b326SKris Buschelman {
2968ab5b326SKris Buschelman   PetscErrorCode ierr;
2978ab5b326SKris Buschelman 
2988ab5b326SKris Buschelman   PetscFunctionBegin;
2998ab5b326SKris Buschelman   /* free all the interior data structures from mat */
3008ab5b326SKris Buschelman   ierr = (*A->ops->destroy)(A);CHKERRQ(ierr);
301d2c95936SBarry Smith   ierr = PetscHeaderDestroy_Private((PetscObject)A);CHKERRQ(ierr);
302357abbc8SBarry Smith   ierr = PetscFree(A->rmap.range);CHKERRQ(ierr);
303357abbc8SBarry Smith   ierr = PetscFree(A->cmap.range);CHKERRQ(ierr);
304*d95db058SSatish Balay   ierr = PetscFree(A->spptr);CHKERRQ(ierr);
3058ab5b326SKris Buschelman 
3068ab5b326SKris Buschelman   /* copy C over to A */
3078ab5b326SKris Buschelman   if (C) {
3088ab5b326SKris Buschelman     ierr = PetscMemcpy(A,C,sizeof(struct _p_Mat));CHKERRQ(ierr);
3098ab5b326SKris Buschelman     ierr = PetscLogObjectDestroy((PetscObject)C);CHKERRQ(ierr);
3108ab5b326SKris Buschelman     ierr = PetscFree(C);CHKERRQ(ierr);
3118ab5b326SKris Buschelman   }
3128ab5b326SKris Buschelman   PetscFunctionReturn(0);
3138ab5b326SKris Buschelman }
314