12d5177cdSBarry Smith 2af0996ceSBarry Smith #include <petsc/private/matimpl.h> 35bd3b8fbSHong Zhang 4bc5ccf88SSatish Balay #define DEFAULT_STASH_SIZE 10000 54c1ff481SSatish Balay 6ac2b2aa0SJed Brown static PetscErrorCode MatStashScatterBegin_Ref(Mat, MatStash *, PetscInt *); 7d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatStashScatterGetMesg_Ref(MatStash *, PetscMPIInt *, PetscInt **, PetscInt **, PetscScalar **, PetscInt *); 8d24d4204SJose E. Roman PETSC_INTERN PetscErrorCode MatStashScatterEnd_Ref(MatStash *); 975d39b6aSBarry Smith #if !defined(PETSC_HAVE_MPIUNI) 10d7d60843SJed Brown static PetscErrorCode MatStashScatterBegin_BTS(Mat, MatStash *, PetscInt *); 11d7d60843SJed Brown static PetscErrorCode MatStashScatterGetMesg_BTS(MatStash *, PetscMPIInt *, PetscInt **, PetscInt **, PetscScalar **, PetscInt *); 12d7d60843SJed Brown static PetscErrorCode MatStashScatterEnd_BTS(MatStash *); 1375d39b6aSBarry Smith #endif 14d7d60843SJed Brown 159417f4adSLois Curfman McInnes /* 168798bf22SSatish Balay MatStashCreate_Private - Creates a stash,currently used for all the parallel 174c1ff481SSatish Balay matrix implementations. The stash is where elements of a matrix destined 184c1ff481SSatish Balay to be stored on other processors are kept until matrix assembly is done. 199417f4adSLois Curfman McInnes 204c1ff481SSatish Balay This is a simple minded stash. Simply adds entries to end of stash. 214c1ff481SSatish Balay 224c1ff481SSatish Balay Input Parameters: 234c1ff481SSatish Balay comm - communicator, required for scatters. 244c1ff481SSatish Balay bs - stash block size. used when stashing blocks of values 254c1ff481SSatish Balay 264c1ff481SSatish Balay Output Parameters: 274c1ff481SSatish Balay stash - the newly created stash 289417f4adSLois Curfman McInnes */ 29d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashCreate_Private(MPI_Comm comm, PetscInt bs, MatStash *stash) 30d71ae5a4SJacob Faibussowitsch { 31533163c2SBarry Smith PetscInt max, *opt, nopt, i; 32ace3abfcSBarry Smith PetscBool flg; 33bc5ccf88SSatish Balay 343a40ed3dSBarry Smith PetscFunctionBegin; 35bc5ccf88SSatish Balay /* Require 2 tags,get the second using PetscCommGetNewTag() */ 36752ec6e0SSatish Balay stash->comm = comm; 378865f1eaSKarl Rupp 389566063dSJacob Faibussowitsch PetscCall(PetscCommGetNewTag(stash->comm, &stash->tag1)); 399566063dSJacob Faibussowitsch PetscCall(PetscCommGetNewTag(stash->comm, &stash->tag2)); 409566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(stash->comm, &stash->size)); 419566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(stash->comm, &stash->rank)); 429566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(2 * stash->size, &stash->flg_v)); 43533163c2SBarry Smith for (i = 0; i < 2 * stash->size; i++) stash->flg_v[i] = -1; 44533163c2SBarry Smith 45434d7ff9SSatish Balay nopt = stash->size; 469566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nopt, &opt)); 479566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetIntArray(NULL, NULL, "-matstash_initial_size", opt, &nopt, &flg)); 48434d7ff9SSatish Balay if (flg) { 49434d7ff9SSatish Balay if (nopt == 1) max = opt[0]; 50434d7ff9SSatish Balay else if (nopt == stash->size) max = opt[stash->rank]; 51434d7ff9SSatish Balay else if (stash->rank < nopt) max = opt[stash->rank]; 52f4ab19daSSatish Balay else max = 0; /* Use default */ 53434d7ff9SSatish Balay stash->umax = max; 54434d7ff9SSatish Balay } else { 55434d7ff9SSatish Balay stash->umax = 0; 56434d7ff9SSatish Balay } 579566063dSJacob Faibussowitsch PetscCall(PetscFree(opt)); 584c1ff481SSatish Balay if (bs <= 0) bs = 1; 59a2d1c673SSatish Balay 604c1ff481SSatish Balay stash->bs = bs; 619417f4adSLois Curfman McInnes stash->nmax = 0; 62434d7ff9SSatish Balay stash->oldnmax = 0; 639417f4adSLois Curfman McInnes stash->n = 0; 644c1ff481SSatish Balay stash->reallocs = -1; 65f4259b30SLisandro Dalcin stash->space_head = NULL; 66f4259b30SLisandro Dalcin stash->space = NULL; 679417f4adSLois Curfman McInnes 68f4259b30SLisandro Dalcin stash->send_waits = NULL; 69f4259b30SLisandro Dalcin stash->recv_waits = NULL; 70f4259b30SLisandro Dalcin stash->send_status = NULL; 71bc5ccf88SSatish Balay stash->nsends = 0; 72bc5ccf88SSatish Balay stash->nrecvs = 0; 73f4259b30SLisandro Dalcin stash->svalues = NULL; 74f4259b30SLisandro Dalcin stash->rvalues = NULL; 75f4259b30SLisandro Dalcin stash->rindices = NULL; 76a2d1c673SSatish Balay stash->nprocessed = 0; 7767318a8aSJed Brown stash->reproduce = PETSC_FALSE; 78d7d60843SJed Brown stash->blocktype = MPI_DATATYPE_NULL; 798865f1eaSKarl Rupp 809566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-matstash_reproduce", &stash->reproduce, NULL)); 811667be42SBarry Smith #if !defined(PETSC_HAVE_MPIUNI) 82ca723aa4SStefano Zampini flg = PETSC_FALSE; 839566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-matstash_legacy", &flg, NULL)); 84b30fb036SBarry Smith if (!flg) { 85d7d60843SJed Brown stash->ScatterBegin = MatStashScatterBegin_BTS; 86d7d60843SJed Brown stash->ScatterGetMesg = MatStashScatterGetMesg_BTS; 87d7d60843SJed Brown stash->ScatterEnd = MatStashScatterEnd_BTS; 88d7d60843SJed Brown stash->ScatterDestroy = MatStashScatterDestroy_BTS; 89ac2b2aa0SJed Brown } else { 901667be42SBarry Smith #endif 91ac2b2aa0SJed Brown stash->ScatterBegin = MatStashScatterBegin_Ref; 92ac2b2aa0SJed Brown stash->ScatterGetMesg = MatStashScatterGetMesg_Ref; 93ac2b2aa0SJed Brown stash->ScatterEnd = MatStashScatterEnd_Ref; 94ac2b2aa0SJed Brown stash->ScatterDestroy = NULL; 951667be42SBarry Smith #if !defined(PETSC_HAVE_MPIUNI) 96ac2b2aa0SJed Brown } 971667be42SBarry Smith #endif 98*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 999417f4adSLois Curfman McInnes } 1009417f4adSLois Curfman McInnes 1014c1ff481SSatish Balay /* 1028798bf22SSatish Balay MatStashDestroy_Private - Destroy the stash 1034c1ff481SSatish Balay */ 104d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashDestroy_Private(MatStash *stash) 105d71ae5a4SJacob Faibussowitsch { 106bc5ccf88SSatish Balay PetscFunctionBegin; 1079566063dSJacob Faibussowitsch PetscCall(PetscMatStashSpaceDestroy(&stash->space_head)); 1089566063dSJacob Faibussowitsch if (stash->ScatterDestroy) PetscCall((*stash->ScatterDestroy)(stash)); 1098865f1eaSKarl Rupp 110f4259b30SLisandro Dalcin stash->space = NULL; 1118865f1eaSKarl Rupp 1129566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->flg_v)); 113*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 114bc5ccf88SSatish Balay } 115bc5ccf88SSatish Balay 1164c1ff481SSatish Balay /* 11767318a8aSJed Brown MatStashScatterEnd_Private - This is called as the final stage of 1184c1ff481SSatish Balay scatter. The final stages of message passing is done here, and 11967318a8aSJed Brown all the memory used for message passing is cleaned up. This 1204c1ff481SSatish Balay routine also resets the stash, and deallocates the memory used 1214c1ff481SSatish Balay for the stash. It also keeps track of the current memory usage 1224c1ff481SSatish Balay so that the same value can be used the next time through. 1234c1ff481SSatish Balay */ 124d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashScatterEnd_Private(MatStash *stash) 125d71ae5a4SJacob Faibussowitsch { 126ac2b2aa0SJed Brown PetscFunctionBegin; 1279566063dSJacob Faibussowitsch PetscCall((*stash->ScatterEnd)(stash)); 128*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 129ac2b2aa0SJed Brown } 130ac2b2aa0SJed Brown 131d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatStashScatterEnd_Ref(MatStash *stash) 132d71ae5a4SJacob Faibussowitsch { 133533163c2SBarry Smith PetscInt nsends = stash->nsends, bs2, oldnmax, i; 134a2d1c673SSatish Balay MPI_Status *send_status; 135a2d1c673SSatish Balay 1363a40ed3dSBarry Smith PetscFunctionBegin; 137533163c2SBarry Smith for (i = 0; i < 2 * stash->size; i++) stash->flg_v[i] = -1; 138a2d1c673SSatish Balay /* wait on sends */ 139a2d1c673SSatish Balay if (nsends) { 1409566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(2 * nsends, &send_status)); 1419566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2 * nsends, stash->send_waits, send_status)); 1429566063dSJacob Faibussowitsch PetscCall(PetscFree(send_status)); 143a2d1c673SSatish Balay } 144a2d1c673SSatish Balay 145c0c58ca7SSatish Balay /* Now update nmaxold to be app 10% more than max n used, this way the 146434d7ff9SSatish Balay wastage of space is reduced the next time this stash is used. 147434d7ff9SSatish Balay Also update the oldmax, only if it increases */ 148b9b97703SBarry Smith if (stash->n) { 14994b769a5SSatish Balay bs2 = stash->bs * stash->bs; 1508a9378f0SSatish Balay oldnmax = ((int)(stash->n * 1.1) + 5) * bs2; 151434d7ff9SSatish Balay if (oldnmax > stash->oldnmax) stash->oldnmax = oldnmax; 152b9b97703SBarry Smith } 153434d7ff9SSatish Balay 154d07ff455SSatish Balay stash->nmax = 0; 155d07ff455SSatish Balay stash->n = 0; 1564c1ff481SSatish Balay stash->reallocs = -1; 157a2d1c673SSatish Balay stash->nprocessed = 0; 1588865f1eaSKarl Rupp 1599566063dSJacob Faibussowitsch PetscCall(PetscMatStashSpaceDestroy(&stash->space_head)); 1608865f1eaSKarl Rupp 161f4259b30SLisandro Dalcin stash->space = NULL; 1628865f1eaSKarl Rupp 1639566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->send_waits)); 1649566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->recv_waits)); 1659566063dSJacob Faibussowitsch PetscCall(PetscFree2(stash->svalues, stash->sindices)); 1669566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->rvalues[0])); 1679566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->rvalues)); 1689566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->rindices[0])); 1699566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->rindices)); 170*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1719417f4adSLois Curfman McInnes } 1729417f4adSLois Curfman McInnes 1734c1ff481SSatish Balay /* 1746aad120cSJose E. Roman MatStashGetInfo_Private - Gets the relevant statistics of the stash 1754c1ff481SSatish Balay 1764c1ff481SSatish Balay Input Parameters: 1774c1ff481SSatish Balay stash - the stash 17894b769a5SSatish Balay nstash - the size of the stash. Indicates the number of values stored. 1794c1ff481SSatish Balay reallocs - the number of additional mallocs incurred. 1804c1ff481SSatish Balay 1814c1ff481SSatish Balay */ 182d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashGetInfo_Private(MatStash *stash, PetscInt *nstash, PetscInt *reallocs) 183d71ae5a4SJacob Faibussowitsch { 184c1ac3661SBarry Smith PetscInt bs2 = stash->bs * stash->bs; 18594b769a5SSatish Balay 1863a40ed3dSBarry Smith PetscFunctionBegin; 1871ecfd215SBarry Smith if (nstash) *nstash = stash->n * bs2; 1881ecfd215SBarry Smith if (reallocs) { 189434d7ff9SSatish Balay if (stash->reallocs < 0) *reallocs = 0; 190434d7ff9SSatish Balay else *reallocs = stash->reallocs; 1911ecfd215SBarry Smith } 192*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 193bc5ccf88SSatish Balay } 1944c1ff481SSatish Balay 1954c1ff481SSatish Balay /* 1968798bf22SSatish Balay MatStashSetInitialSize_Private - Sets the initial size of the stash 1974c1ff481SSatish Balay 1984c1ff481SSatish Balay Input Parameters: 1994c1ff481SSatish Balay stash - the stash 2004c1ff481SSatish Balay max - the value that is used as the max size of the stash. 2014c1ff481SSatish Balay this value is used while allocating memory. 2024c1ff481SSatish Balay */ 203d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashSetInitialSize_Private(MatStash *stash, PetscInt max) 204d71ae5a4SJacob Faibussowitsch { 205bc5ccf88SSatish Balay PetscFunctionBegin; 206434d7ff9SSatish Balay stash->umax = max; 207*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20897530c3fSBarry Smith } 20997530c3fSBarry Smith 2108798bf22SSatish Balay /* MatStashExpand_Private - Expand the stash. This function is called 2114c1ff481SSatish Balay when the space in the stash is not sufficient to add the new values 2124c1ff481SSatish Balay being inserted into the stash. 2134c1ff481SSatish Balay 2144c1ff481SSatish Balay Input Parameters: 2154c1ff481SSatish Balay stash - the stash 2164c1ff481SSatish Balay incr - the minimum increase requested 2174c1ff481SSatish Balay 21811a5261eSBarry Smith Note: 2194c1ff481SSatish Balay This routine doubles the currently used memory. 2204c1ff481SSatish Balay */ 221d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashExpand_Private(MatStash *stash, PetscInt incr) 222d71ae5a4SJacob Faibussowitsch { 2235bd3b8fbSHong Zhang PetscInt newnmax, bs2 = stash->bs * stash->bs; 2249417f4adSLois Curfman McInnes 2253a40ed3dSBarry Smith PetscFunctionBegin; 2269417f4adSLois Curfman McInnes /* allocate a larger stash */ 227c481ceb5SSatish Balay if (!stash->oldnmax && !stash->nmax) { /* new stash */ 228434d7ff9SSatish Balay if (stash->umax) newnmax = stash->umax / bs2; 229434d7ff9SSatish Balay else newnmax = DEFAULT_STASH_SIZE / bs2; 230c481ceb5SSatish Balay } else if (!stash->nmax) { /* resuing stash */ 231434d7ff9SSatish Balay if (stash->umax > stash->oldnmax) newnmax = stash->umax / bs2; 232434d7ff9SSatish Balay else newnmax = stash->oldnmax / bs2; 233434d7ff9SSatish Balay } else newnmax = stash->nmax * 2; 2344c1ff481SSatish Balay if (newnmax < (stash->nmax + incr)) newnmax += 2 * incr; 235d07ff455SSatish Balay 23675cae7c1SHong Zhang /* Get a MatStashSpace and attach it to stash */ 2379566063dSJacob Faibussowitsch PetscCall(PetscMatStashSpaceGet(bs2, newnmax, &stash->space)); 238b087b6d6SSatish Balay if (!stash->space_head) { /* new stash or resuing stash->oldnmax */ 239b087b6d6SSatish Balay stash->space_head = stash->space; 24075cae7c1SHong Zhang } 241b087b6d6SSatish Balay 242bc5ccf88SSatish Balay stash->reallocs++; 24375cae7c1SHong Zhang stash->nmax = newnmax; 244*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 245bc5ccf88SSatish Balay } 246bc5ccf88SSatish Balay /* 2478798bf22SSatish Balay MatStashValuesRow_Private - inserts values into the stash. This function 2484c1ff481SSatish Balay expects the values to be roworiented. Multiple columns belong to the same row 2494c1ff481SSatish Balay can be inserted with a single call to this function. 2504c1ff481SSatish Balay 2514c1ff481SSatish Balay Input Parameters: 2524c1ff481SSatish Balay stash - the stash 2534c1ff481SSatish Balay row - the global row correspoiding to the values 2544c1ff481SSatish Balay n - the number of elements inserted. All elements belong to the above row. 2554c1ff481SSatish Balay idxn - the global column indices corresponding to each of the values. 2564c1ff481SSatish Balay values - the values inserted 257bc5ccf88SSatish Balay */ 258d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashValuesRow_Private(MatStash *stash, PetscInt row, PetscInt n, const PetscInt idxn[], const PetscScalar values[], PetscBool ignorezeroentries) 259d71ae5a4SJacob Faibussowitsch { 260b400d20cSBarry Smith PetscInt i, k, cnt = 0; 26175cae7c1SHong Zhang PetscMatStashSpace space = stash->space; 262bc5ccf88SSatish Balay 263bc5ccf88SSatish Balay PetscFunctionBegin; 2644c1ff481SSatish Balay /* Check and see if we have sufficient memory */ 26548a46eb9SPierre Jolivet if (!space || space->local_remaining < n) PetscCall(MatStashExpand_Private(stash, n)); 26675cae7c1SHong Zhang space = stash->space; 26775cae7c1SHong Zhang k = space->local_used; 2684c1ff481SSatish Balay for (i = 0; i < n; i++) { 26914069ce9SStefano Zampini if (ignorezeroentries && values && values[i] == 0.0) continue; 27075cae7c1SHong Zhang space->idx[k] = row; 27175cae7c1SHong Zhang space->idy[k] = idxn[i]; 27214069ce9SStefano Zampini space->val[k] = values ? values[i] : 0.0; 27375cae7c1SHong Zhang k++; 274b400d20cSBarry Smith cnt++; 2759417f4adSLois Curfman McInnes } 276b400d20cSBarry Smith stash->n += cnt; 277b400d20cSBarry Smith space->local_used += cnt; 278b400d20cSBarry Smith space->local_remaining -= cnt; 279*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 280a2d1c673SSatish Balay } 28175cae7c1SHong Zhang 2824c1ff481SSatish Balay /* 2838798bf22SSatish Balay MatStashValuesCol_Private - inserts values into the stash. This function 2844c1ff481SSatish Balay expects the values to be columnoriented. Multiple columns belong to the same row 2854c1ff481SSatish Balay can be inserted with a single call to this function. 286a2d1c673SSatish Balay 2874c1ff481SSatish Balay Input Parameters: 2884c1ff481SSatish Balay stash - the stash 2894c1ff481SSatish Balay row - the global row correspoiding to the values 2904c1ff481SSatish Balay n - the number of elements inserted. All elements belong to the above row. 2914c1ff481SSatish Balay idxn - the global column indices corresponding to each of the values. 2924c1ff481SSatish Balay values - the values inserted 2934c1ff481SSatish Balay stepval - the consecutive values are sepated by a distance of stepval. 2944c1ff481SSatish Balay this happens because the input is columnoriented. 2954c1ff481SSatish Balay */ 296d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashValuesCol_Private(MatStash *stash, PetscInt row, PetscInt n, const PetscInt idxn[], const PetscScalar values[], PetscInt stepval, PetscBool ignorezeroentries) 297d71ae5a4SJacob Faibussowitsch { 29850e9ab7cSBarry Smith PetscInt i, k, cnt = 0; 29975cae7c1SHong Zhang PetscMatStashSpace space = stash->space; 300a2d1c673SSatish Balay 3014c1ff481SSatish Balay PetscFunctionBegin; 3024c1ff481SSatish Balay /* Check and see if we have sufficient memory */ 30348a46eb9SPierre Jolivet if (!space || space->local_remaining < n) PetscCall(MatStashExpand_Private(stash, n)); 30475cae7c1SHong Zhang space = stash->space; 30575cae7c1SHong Zhang k = space->local_used; 3064c1ff481SSatish Balay for (i = 0; i < n; i++) { 30714069ce9SStefano Zampini if (ignorezeroentries && values && values[i * stepval] == 0.0) continue; 30875cae7c1SHong Zhang space->idx[k] = row; 30975cae7c1SHong Zhang space->idy[k] = idxn[i]; 31014069ce9SStefano Zampini space->val[k] = values ? values[i * stepval] : 0.0; 31175cae7c1SHong Zhang k++; 312b400d20cSBarry Smith cnt++; 3134c1ff481SSatish Balay } 314b400d20cSBarry Smith stash->n += cnt; 315b400d20cSBarry Smith space->local_used += cnt; 316b400d20cSBarry Smith space->local_remaining -= cnt; 317*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3184c1ff481SSatish Balay } 3194c1ff481SSatish Balay 3204c1ff481SSatish Balay /* 3218798bf22SSatish Balay MatStashValuesRowBlocked_Private - inserts blocks of values into the stash. 3224c1ff481SSatish Balay This function expects the values to be roworiented. Multiple columns belong 3234c1ff481SSatish Balay to the same block-row can be inserted with a single call to this function. 3244c1ff481SSatish Balay This function extracts the sub-block of values based on the dimensions of 3254c1ff481SSatish Balay the original input block, and the row,col values corresponding to the blocks. 3264c1ff481SSatish Balay 3274c1ff481SSatish Balay Input Parameters: 3284c1ff481SSatish Balay stash - the stash 3294c1ff481SSatish Balay row - the global block-row correspoiding to the values 3304c1ff481SSatish Balay n - the number of elements inserted. All elements belong to the above row. 3314c1ff481SSatish Balay idxn - the global block-column indices corresponding to each of the blocks of 3324c1ff481SSatish Balay values. Each block is of size bs*bs. 3334c1ff481SSatish Balay values - the values inserted 3344c1ff481SSatish Balay rmax - the number of block-rows in the original block. 335a5b23f4aSJose E. Roman cmax - the number of block-columns on the original block. 3364c1ff481SSatish Balay idx - the index of the current block-row in the original block. 3374c1ff481SSatish Balay */ 338d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashValuesRowBlocked_Private(MatStash *stash, PetscInt row, PetscInt n, const PetscInt idxn[], const PetscScalar values[], PetscInt rmax, PetscInt cmax, PetscInt idx) 339d71ae5a4SJacob Faibussowitsch { 34075cae7c1SHong Zhang PetscInt i, j, k, bs2, bs = stash->bs, l; 34154f21887SBarry Smith const PetscScalar *vals; 34254f21887SBarry Smith PetscScalar *array; 34375cae7c1SHong Zhang PetscMatStashSpace space = stash->space; 344a2d1c673SSatish Balay 345a2d1c673SSatish Balay PetscFunctionBegin; 34648a46eb9SPierre Jolivet if (!space || space->local_remaining < n) PetscCall(MatStashExpand_Private(stash, n)); 34775cae7c1SHong Zhang space = stash->space; 34875cae7c1SHong Zhang l = space->local_used; 34975cae7c1SHong Zhang bs2 = bs * bs; 3504c1ff481SSatish Balay for (i = 0; i < n; i++) { 35175cae7c1SHong Zhang space->idx[l] = row; 35275cae7c1SHong Zhang space->idy[l] = idxn[i]; 35375cae7c1SHong Zhang /* Now copy over the block of values. Store the values column oriented. 35475cae7c1SHong Zhang This enables inserting multiple blocks belonging to a row with a single 35575cae7c1SHong Zhang funtion call */ 35675cae7c1SHong Zhang array = space->val + bs2 * l; 35775cae7c1SHong Zhang vals = values + idx * bs2 * n + bs * i; 35875cae7c1SHong Zhang for (j = 0; j < bs; j++) { 35914069ce9SStefano Zampini for (k = 0; k < bs; k++) array[k * bs] = values ? vals[k] : 0.0; 36075cae7c1SHong Zhang array++; 36175cae7c1SHong Zhang vals += cmax * bs; 36275cae7c1SHong Zhang } 36375cae7c1SHong Zhang l++; 364a2d1c673SSatish Balay } 3655bd3b8fbSHong Zhang stash->n += n; 36675cae7c1SHong Zhang space->local_used += n; 36775cae7c1SHong Zhang space->local_remaining -= n; 368*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3694c1ff481SSatish Balay } 3704c1ff481SSatish Balay 3714c1ff481SSatish Balay /* 3728798bf22SSatish Balay MatStashValuesColBlocked_Private - inserts blocks of values into the stash. 3734c1ff481SSatish Balay This function expects the values to be roworiented. Multiple columns belong 3744c1ff481SSatish Balay to the same block-row can be inserted with a single call to this function. 3754c1ff481SSatish Balay This function extracts the sub-block of values based on the dimensions of 3764c1ff481SSatish Balay the original input block, and the row,col values corresponding to the blocks. 3774c1ff481SSatish Balay 3784c1ff481SSatish Balay Input Parameters: 3794c1ff481SSatish Balay stash - the stash 3804c1ff481SSatish Balay row - the global block-row correspoiding to the values 3814c1ff481SSatish Balay n - the number of elements inserted. All elements belong to the above row. 3824c1ff481SSatish Balay idxn - the global block-column indices corresponding to each of the blocks of 3834c1ff481SSatish Balay values. Each block is of size bs*bs. 3844c1ff481SSatish Balay values - the values inserted 3854c1ff481SSatish Balay rmax - the number of block-rows in the original block. 386a5b23f4aSJose E. Roman cmax - the number of block-columns on the original block. 3874c1ff481SSatish Balay idx - the index of the current block-row in the original block. 3884c1ff481SSatish Balay */ 389d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashValuesColBlocked_Private(MatStash *stash, PetscInt row, PetscInt n, const PetscInt idxn[], const PetscScalar values[], PetscInt rmax, PetscInt cmax, PetscInt idx) 390d71ae5a4SJacob Faibussowitsch { 39175cae7c1SHong Zhang PetscInt i, j, k, bs2, bs = stash->bs, l; 39254f21887SBarry Smith const PetscScalar *vals; 39354f21887SBarry Smith PetscScalar *array; 39475cae7c1SHong Zhang PetscMatStashSpace space = stash->space; 3954c1ff481SSatish Balay 3964c1ff481SSatish Balay PetscFunctionBegin; 39748a46eb9SPierre Jolivet if (!space || space->local_remaining < n) PetscCall(MatStashExpand_Private(stash, n)); 39875cae7c1SHong Zhang space = stash->space; 39975cae7c1SHong Zhang l = space->local_used; 40075cae7c1SHong Zhang bs2 = bs * bs; 4014c1ff481SSatish Balay for (i = 0; i < n; i++) { 40275cae7c1SHong Zhang space->idx[l] = row; 40375cae7c1SHong Zhang space->idy[l] = idxn[i]; 40475cae7c1SHong Zhang /* Now copy over the block of values. Store the values column oriented. 40575cae7c1SHong Zhang This enables inserting multiple blocks belonging to a row with a single 40675cae7c1SHong Zhang funtion call */ 40775cae7c1SHong Zhang array = space->val + bs2 * l; 40875cae7c1SHong Zhang vals = values + idx * bs2 * n + bs * i; 40975cae7c1SHong Zhang for (j = 0; j < bs; j++) { 41014069ce9SStefano Zampini for (k = 0; k < bs; k++) array[k] = values ? vals[k] : 0.0; 41175cae7c1SHong Zhang array += bs; 41275cae7c1SHong Zhang vals += rmax * bs; 41375cae7c1SHong Zhang } 4145bd3b8fbSHong Zhang l++; 415a2d1c673SSatish Balay } 4165bd3b8fbSHong Zhang stash->n += n; 41775cae7c1SHong Zhang space->local_used += n; 41875cae7c1SHong Zhang space->local_remaining -= n; 419*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4209417f4adSLois Curfman McInnes } 4214c1ff481SSatish Balay /* 4228798bf22SSatish Balay MatStashScatterBegin_Private - Initiates the transfer of values to the 4234c1ff481SSatish Balay correct owners. This function goes through the stash, and check the 4244c1ff481SSatish Balay owners of each stashed value, and sends the values off to the owner 4254c1ff481SSatish Balay processors. 426bc5ccf88SSatish Balay 4274c1ff481SSatish Balay Input Parameters: 4284c1ff481SSatish Balay stash - the stash 4294c1ff481SSatish Balay owners - an array of size 'no-of-procs' which gives the ownership range 4304c1ff481SSatish Balay for each node. 4314c1ff481SSatish Balay 43211a5261eSBarry Smith Note: 43395452b02SPatrick Sanan The 'owners' array in the cased of the blocked-stash has the 4344c1ff481SSatish Balay ranges specified blocked global indices, and for the regular stash in 4354c1ff481SSatish Balay the proper global indices. 4364c1ff481SSatish Balay */ 437d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashScatterBegin_Private(Mat mat, MatStash *stash, PetscInt *owners) 438d71ae5a4SJacob Faibussowitsch { 439ac2b2aa0SJed Brown PetscFunctionBegin; 4409566063dSJacob Faibussowitsch PetscCall((*stash->ScatterBegin)(mat, stash, owners)); 441*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 442ac2b2aa0SJed Brown } 443ac2b2aa0SJed Brown 444d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashScatterBegin_Ref(Mat mat, MatStash *stash, PetscInt *owners) 445d71ae5a4SJacob Faibussowitsch { 446c1ac3661SBarry Smith PetscInt *owner, *startv, *starti, tag1 = stash->tag1, tag2 = stash->tag2, bs2; 447fe09c992SBarry Smith PetscInt size = stash->size, nsends; 44875cae7c1SHong Zhang PetscInt count, *sindices, **rindices, i, j, idx, lastidx, l; 44954f21887SBarry Smith PetscScalar **rvalues, *svalues; 450bc5ccf88SSatish Balay MPI_Comm comm = stash->comm; 451563fb871SSatish Balay MPI_Request *send_waits, *recv_waits, *recv_waits1, *recv_waits2; 45276ec1555SBarry Smith PetscMPIInt *sizes, *nlengths, nreceives; 4535bd3b8fbSHong Zhang PetscInt *sp_idx, *sp_idy; 45454f21887SBarry Smith PetscScalar *sp_val; 4555bd3b8fbSHong Zhang PetscMatStashSpace space, space_next; 456bc5ccf88SSatish Balay 457bc5ccf88SSatish Balay PetscFunctionBegin; 4584b4eb8d3SJed Brown { /* make sure all processors are either in INSERTMODE or ADDMODE */ 4594b4eb8d3SJed Brown InsertMode addv; 4601c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce((PetscEnum *)&mat->insertmode, (PetscEnum *)&addv, 1, MPIU_ENUM, MPI_BOR, PetscObjectComm((PetscObject)mat))); 46108401ef6SPierre Jolivet PetscCheck(addv != (ADD_VALUES | INSERT_VALUES), PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Some processors inserted others added"); 4624b4eb8d3SJed Brown mat->insertmode = addv; /* in case this processor had no cache */ 4634b4eb8d3SJed Brown } 4644b4eb8d3SJed Brown 4654c1ff481SSatish Balay bs2 = stash->bs * stash->bs; 46675cae7c1SHong Zhang 467bc5ccf88SSatish Balay /* first count number of contributors to each processor */ 4689566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(size, &nlengths)); 4699566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(stash->n + 1, &owner)); 470a2d1c673SSatish Balay 47175cae7c1SHong Zhang i = j = 0; 4727357eb19SBarry Smith lastidx = -1; 4735bd3b8fbSHong Zhang space = stash->space_head; 4746c4ed002SBarry Smith while (space) { 47575cae7c1SHong Zhang space_next = space->next; 4765bd3b8fbSHong Zhang sp_idx = space->idx; 47775cae7c1SHong Zhang for (l = 0; l < space->local_used; l++) { 4787357eb19SBarry Smith /* if indices are NOT locally sorted, need to start search at the beginning */ 4795bd3b8fbSHong Zhang if (lastidx > (idx = sp_idx[l])) j = 0; 4807357eb19SBarry Smith lastidx = idx; 4817357eb19SBarry Smith for (; j < size; j++) { 4824c1ff481SSatish Balay if (idx >= owners[j] && idx < owners[j + 1]) { 4839371c9d4SSatish Balay nlengths[j]++; 4849371c9d4SSatish Balay owner[i] = j; 4859371c9d4SSatish Balay break; 486bc5ccf88SSatish Balay } 487bc5ccf88SSatish Balay } 48875cae7c1SHong Zhang i++; 48975cae7c1SHong Zhang } 49075cae7c1SHong Zhang space = space_next; 491bc5ccf88SSatish Balay } 492071fcb05SBarry Smith 493563fb871SSatish Balay /* Now check what procs get messages - and compute nsends. */ 4949566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(size, &sizes)); 495563fb871SSatish Balay for (i = 0, nsends = 0; i < size; i++) { 4968865f1eaSKarl Rupp if (nlengths[i]) { 4979371c9d4SSatish Balay sizes[i] = 1; 4989371c9d4SSatish Balay nsends++; 4998865f1eaSKarl Rupp } 500563fb871SSatish Balay } 501bc5ccf88SSatish Balay 5029371c9d4SSatish Balay { 5039371c9d4SSatish Balay PetscMPIInt *onodes, *olengths; 504563fb871SSatish Balay /* Determine the number of messages to expect, their lengths, from from-ids */ 5059566063dSJacob Faibussowitsch PetscCall(PetscGatherNumberOfMessages(comm, sizes, nlengths, &nreceives)); 5069566063dSJacob Faibussowitsch PetscCall(PetscGatherMessageLengths(comm, nsends, nreceives, nlengths, &onodes, &olengths)); 507563fb871SSatish Balay /* since clubbing row,col - lengths are multiplied by 2 */ 508563fb871SSatish Balay for (i = 0; i < nreceives; i++) olengths[i] *= 2; 5099566063dSJacob Faibussowitsch PetscCall(PetscPostIrecvInt(comm, tag1, nreceives, onodes, olengths, &rindices, &recv_waits1)); 510563fb871SSatish Balay /* values are size 'bs2' lengths (and remove earlier factor 2 */ 511563fb871SSatish Balay for (i = 0; i < nreceives; i++) olengths[i] = olengths[i] * bs2 / 2; 5129566063dSJacob Faibussowitsch PetscCall(PetscPostIrecvScalar(comm, tag2, nreceives, onodes, olengths, &rvalues, &recv_waits2)); 5139566063dSJacob Faibussowitsch PetscCall(PetscFree(onodes)); 5149371c9d4SSatish Balay PetscCall(PetscFree(olengths)); 5159371c9d4SSatish Balay } 516bc5ccf88SSatish Balay 517bc5ccf88SSatish Balay /* do sends: 518bc5ccf88SSatish Balay 1) starts[i] gives the starting index in svalues for stuff going to 519bc5ccf88SSatish Balay the ith processor 520bc5ccf88SSatish Balay */ 5219566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(bs2 * stash->n, &svalues, 2 * (stash->n + 1), &sindices)); 5229566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(2 * nsends, &send_waits)); 5239566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(size, &startv, size, &starti)); 524a2d1c673SSatish Balay /* use 2 sends the first with all_a, the next with all_i and all_j */ 5259371c9d4SSatish Balay startv[0] = 0; 5269371c9d4SSatish Balay starti[0] = 0; 527bc5ccf88SSatish Balay for (i = 1; i < size; i++) { 528563fb871SSatish Balay startv[i] = startv[i - 1] + nlengths[i - 1]; 529533163c2SBarry Smith starti[i] = starti[i - 1] + 2 * nlengths[i - 1]; 530bc5ccf88SSatish Balay } 53175cae7c1SHong Zhang 53275cae7c1SHong Zhang i = 0; 5335bd3b8fbSHong Zhang space = stash->space_head; 5346c4ed002SBarry Smith while (space) { 53575cae7c1SHong Zhang space_next = space->next; 5365bd3b8fbSHong Zhang sp_idx = space->idx; 5375bd3b8fbSHong Zhang sp_idy = space->idy; 5385bd3b8fbSHong Zhang sp_val = space->val; 53975cae7c1SHong Zhang for (l = 0; l < space->local_used; l++) { 540bc5ccf88SSatish Balay j = owner[i]; 541a2d1c673SSatish Balay if (bs2 == 1) { 5425bd3b8fbSHong Zhang svalues[startv[j]] = sp_val[l]; 543a2d1c673SSatish Balay } else { 544c1ac3661SBarry Smith PetscInt k; 54554f21887SBarry Smith PetscScalar *buf1, *buf2; 5464c1ff481SSatish Balay buf1 = svalues + bs2 * startv[j]; 547b087b6d6SSatish Balay buf2 = space->val + bs2 * l; 5488865f1eaSKarl Rupp for (k = 0; k < bs2; k++) buf1[k] = buf2[k]; 549a2d1c673SSatish Balay } 5505bd3b8fbSHong Zhang sindices[starti[j]] = sp_idx[l]; 5515bd3b8fbSHong Zhang sindices[starti[j] + nlengths[j]] = sp_idy[l]; 552bc5ccf88SSatish Balay startv[j]++; 553bc5ccf88SSatish Balay starti[j]++; 55475cae7c1SHong Zhang i++; 55575cae7c1SHong Zhang } 55675cae7c1SHong Zhang space = space_next; 557bc5ccf88SSatish Balay } 558bc5ccf88SSatish Balay startv[0] = 0; 5598865f1eaSKarl Rupp for (i = 1; i < size; i++) startv[i] = startv[i - 1] + nlengths[i - 1]; 560e5d0e772SSatish Balay 561bc5ccf88SSatish Balay for (i = 0, count = 0; i < size; i++) { 56276ec1555SBarry Smith if (sizes[i]) { 5639566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sindices + 2 * startv[i], 2 * nlengths[i], MPIU_INT, i, tag1, comm, send_waits + count++)); 5649566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(svalues + bs2 * startv[i], bs2 * nlengths[i], MPIU_SCALAR, i, tag2, comm, send_waits + count++)); 565bc5ccf88SSatish Balay } 566b85c94c3SSatish Balay } 5676cf91177SBarry Smith #if defined(PETSC_USE_INFO) 5689566063dSJacob Faibussowitsch PetscCall(PetscInfo(NULL, "No of messages: %" PetscInt_FMT " \n", nsends)); 569e5d0e772SSatish Balay for (i = 0; i < size; i++) { 57048a46eb9SPierre Jolivet if (sizes[i]) PetscCall(PetscInfo(NULL, "Mesg_to: %" PetscInt_FMT ": size: %zu bytes\n", i, (size_t)(nlengths[i] * (bs2 * sizeof(PetscScalar) + 2 * sizeof(PetscInt))))); 571e5d0e772SSatish Balay } 572e5d0e772SSatish Balay #endif 5739566063dSJacob Faibussowitsch PetscCall(PetscFree(nlengths)); 5749566063dSJacob Faibussowitsch PetscCall(PetscFree(owner)); 5759566063dSJacob Faibussowitsch PetscCall(PetscFree2(startv, starti)); 5769566063dSJacob Faibussowitsch PetscCall(PetscFree(sizes)); 577a2d1c673SSatish Balay 578563fb871SSatish Balay /* recv_waits need to be contiguous for MatStashScatterGetMesg_Private() */ 5799566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(2 * nreceives, &recv_waits)); 580563fb871SSatish Balay 581563fb871SSatish Balay for (i = 0; i < nreceives; i++) { 582563fb871SSatish Balay recv_waits[2 * i] = recv_waits1[i]; 583563fb871SSatish Balay recv_waits[2 * i + 1] = recv_waits2[i]; 584563fb871SSatish Balay } 585563fb871SSatish Balay stash->recv_waits = recv_waits; 5868865f1eaSKarl Rupp 5879566063dSJacob Faibussowitsch PetscCall(PetscFree(recv_waits1)); 5889566063dSJacob Faibussowitsch PetscCall(PetscFree(recv_waits2)); 589563fb871SSatish Balay 590c05d87d6SBarry Smith stash->svalues = svalues; 591c05d87d6SBarry Smith stash->sindices = sindices; 592c05d87d6SBarry Smith stash->rvalues = rvalues; 593c05d87d6SBarry Smith stash->rindices = rindices; 594c05d87d6SBarry Smith stash->send_waits = send_waits; 595c05d87d6SBarry Smith stash->nsends = nsends; 596c05d87d6SBarry Smith stash->nrecvs = nreceives; 59767318a8aSJed Brown stash->reproduce_count = 0; 598*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 599bc5ccf88SSatish Balay } 600bc5ccf88SSatish Balay 601a2d1c673SSatish Balay /* 6028798bf22SSatish Balay MatStashScatterGetMesg_Private - This function waits on the receives posted 6038798bf22SSatish Balay in the function MatStashScatterBegin_Private() and returns one message at 6044c1ff481SSatish Balay a time to the calling function. If no messages are left, it indicates this 6054c1ff481SSatish Balay by setting flg = 0, else it sets flg = 1. 6064c1ff481SSatish Balay 6074c1ff481SSatish Balay Input Parameters: 6084c1ff481SSatish Balay stash - the stash 6094c1ff481SSatish Balay 6104c1ff481SSatish Balay Output Parameters: 6114c1ff481SSatish Balay nvals - the number of entries in the current message. 6124c1ff481SSatish Balay rows - an array of row indices (or blocked indices) corresponding to the values 6134c1ff481SSatish Balay cols - an array of columnindices (or blocked indices) corresponding to the values 6144c1ff481SSatish Balay vals - the values 6154c1ff481SSatish Balay flg - 0 indicates no more message left, and the current call has no values associated. 6164c1ff481SSatish Balay 1 indicates that the current call successfully received a message, and the 6174c1ff481SSatish Balay other output parameters nvals,rows,cols,vals are set appropriately. 618a2d1c673SSatish Balay */ 619d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashScatterGetMesg_Private(MatStash *stash, PetscMPIInt *nvals, PetscInt **rows, PetscInt **cols, PetscScalar **vals, PetscInt *flg) 620d71ae5a4SJacob Faibussowitsch { 621ac2b2aa0SJed Brown PetscFunctionBegin; 6229566063dSJacob Faibussowitsch PetscCall((*stash->ScatterGetMesg)(stash, nvals, rows, cols, vals, flg)); 623*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 624ac2b2aa0SJed Brown } 625ac2b2aa0SJed Brown 626d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatStashScatterGetMesg_Ref(MatStash *stash, PetscMPIInt *nvals, PetscInt **rows, PetscInt **cols, PetscScalar **vals, PetscInt *flg) 627d71ae5a4SJacob Faibussowitsch { 628533163c2SBarry Smith PetscMPIInt i, *flg_v = stash->flg_v, i1, i2; 629fe09c992SBarry Smith PetscInt bs2; 630a2d1c673SSatish Balay MPI_Status recv_status; 631ace3abfcSBarry Smith PetscBool match_found = PETSC_FALSE; 632bc5ccf88SSatish Balay 633bc5ccf88SSatish Balay PetscFunctionBegin; 634a2d1c673SSatish Balay *flg = 0; /* When a message is discovered this is reset to 1 */ 635a2d1c673SSatish Balay /* Return if no more messages to process */ 636*3ba16761SJacob Faibussowitsch if (stash->nprocessed == stash->nrecvs) PetscFunctionReturn(PETSC_SUCCESS); 637a2d1c673SSatish Balay 6384c1ff481SSatish Balay bs2 = stash->bs * stash->bs; 63967318a8aSJed Brown /* If a matching pair of receives are found, process them, and return the data to 640a2d1c673SSatish Balay the calling function. Until then keep receiving messages */ 641a2d1c673SSatish Balay while (!match_found) { 64267318a8aSJed Brown if (stash->reproduce) { 64367318a8aSJed Brown i = stash->reproduce_count++; 6449566063dSJacob Faibussowitsch PetscCallMPI(MPI_Wait(stash->recv_waits + i, &recv_status)); 64567318a8aSJed Brown } else { 6469566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitany(2 * stash->nrecvs, stash->recv_waits, &i, &recv_status)); 64767318a8aSJed Brown } 64808401ef6SPierre Jolivet PetscCheck(recv_status.MPI_SOURCE >= 0, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Negative MPI source!"); 649533163c2SBarry Smith 65067318a8aSJed Brown /* Now pack the received message into a structure which is usable by others */ 651a2d1c673SSatish Balay if (i % 2) { 6529566063dSJacob Faibussowitsch PetscCallMPI(MPI_Get_count(&recv_status, MPIU_SCALAR, nvals)); 653c1dc657dSBarry Smith flg_v[2 * recv_status.MPI_SOURCE] = i / 2; 654a2d1c673SSatish Balay *nvals = *nvals / bs2; 655563fb871SSatish Balay } else { 6569566063dSJacob Faibussowitsch PetscCallMPI(MPI_Get_count(&recv_status, MPIU_INT, nvals)); 657563fb871SSatish Balay flg_v[2 * recv_status.MPI_SOURCE + 1] = i / 2; 658563fb871SSatish Balay *nvals = *nvals / 2; /* This message has both row indices and col indices */ 659bc5ccf88SSatish Balay } 660a2d1c673SSatish Balay 661cb2b73ccSBarry Smith /* Check if we have both messages from this proc */ 662c1dc657dSBarry Smith i1 = flg_v[2 * recv_status.MPI_SOURCE]; 663c1dc657dSBarry Smith i2 = flg_v[2 * recv_status.MPI_SOURCE + 1]; 664a2d1c673SSatish Balay if (i1 != -1 && i2 != -1) { 665563fb871SSatish Balay *rows = stash->rindices[i2]; 666a2d1c673SSatish Balay *cols = *rows + *nvals; 667563fb871SSatish Balay *vals = stash->rvalues[i1]; 668a2d1c673SSatish Balay *flg = 1; 669a2d1c673SSatish Balay stash->nprocessed++; 67035d8aa7fSBarry Smith match_found = PETSC_TRUE; 671bc5ccf88SSatish Balay } 672bc5ccf88SSatish Balay } 673*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 674bc5ccf88SSatish Balay } 675d7d60843SJed Brown 676e69ee1f7SSatish Balay #if !defined(PETSC_HAVE_MPIUNI) 677d7d60843SJed Brown typedef struct { 678d7d60843SJed Brown PetscInt row; 679d7d60843SJed Brown PetscInt col; 680d7d60843SJed Brown PetscScalar vals[1]; /* Actually an array of length bs2 */ 681d7d60843SJed Brown } MatStashBlock; 682d7d60843SJed Brown 683d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashSortCompress_Private(MatStash *stash, InsertMode insertmode) 684d71ae5a4SJacob Faibussowitsch { 685d7d60843SJed Brown PetscMatStashSpace space; 686d7d60843SJed Brown PetscInt n = stash->n, bs = stash->bs, bs2 = bs * bs, cnt, *row, *col, *perm, rowstart, i; 687d7d60843SJed Brown PetscScalar **valptr; 688d7d60843SJed Brown 689d7d60843SJed Brown PetscFunctionBegin; 6909566063dSJacob Faibussowitsch PetscCall(PetscMalloc4(n, &row, n, &col, n, &valptr, n, &perm)); 691d7d60843SJed Brown for (space = stash->space_head, cnt = 0; space; space = space->next) { 692d7d60843SJed Brown for (i = 0; i < space->local_used; i++) { 693d7d60843SJed Brown row[cnt] = space->idx[i]; 694d7d60843SJed Brown col[cnt] = space->idy[i]; 695d7d60843SJed Brown valptr[cnt] = &space->val[i * bs2]; 696d7d60843SJed Brown perm[cnt] = cnt; /* Will tell us where to find valptr after sorting row[] and col[] */ 697d7d60843SJed Brown cnt++; 698d7d60843SJed Brown } 699d7d60843SJed Brown } 70008401ef6SPierre Jolivet PetscCheck(cnt == n, PETSC_COMM_SELF, PETSC_ERR_PLIB, "MatStash n %" PetscInt_FMT ", but counted %" PetscInt_FMT " entries", n, cnt); 7019566063dSJacob Faibussowitsch PetscCall(PetscSortIntWithArrayPair(n, row, col, perm)); 702d7d60843SJed Brown /* Scan through the rows, sorting each one, combining duplicates, and packing send buffers */ 703d7d60843SJed Brown for (rowstart = 0, cnt = 0, i = 1; i <= n; i++) { 704d7d60843SJed Brown if (i == n || row[i] != row[rowstart]) { /* Sort the last row. */ 705d7d60843SJed Brown PetscInt colstart; 7069566063dSJacob Faibussowitsch PetscCall(PetscSortIntWithArray(i - rowstart, &col[rowstart], &perm[rowstart])); 707d7d60843SJed Brown for (colstart = rowstart; colstart < i;) { /* Compress multiple insertions to the same location */ 708d7d60843SJed Brown PetscInt j, l; 709d7d60843SJed Brown MatStashBlock *block; 7109566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(stash->segsendblocks, 1, &block)); 711d7d60843SJed Brown block->row = row[rowstart]; 712d7d60843SJed Brown block->col = col[colstart]; 7139566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(block->vals, valptr[perm[colstart]], bs2)); 714d7d60843SJed Brown for (j = colstart + 1; j < i && col[j] == col[colstart]; j++) { /* Add any extra stashed blocks at the same (row,col) */ 715d7d60843SJed Brown if (insertmode == ADD_VALUES) { 716d7d60843SJed Brown for (l = 0; l < bs2; l++) block->vals[l] += valptr[perm[j]][l]; 717d7d60843SJed Brown } else { 7189566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(block->vals, valptr[perm[j]], bs2)); 719d7d60843SJed Brown } 720d7d60843SJed Brown } 721d7d60843SJed Brown colstart = j; 722d7d60843SJed Brown } 723d7d60843SJed Brown rowstart = i; 724d7d60843SJed Brown } 725d7d60843SJed Brown } 7269566063dSJacob Faibussowitsch PetscCall(PetscFree4(row, col, valptr, perm)); 727*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 728d7d60843SJed Brown } 729d7d60843SJed Brown 730d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashBlockTypeSetUp(MatStash *stash) 731d71ae5a4SJacob Faibussowitsch { 732d7d60843SJed Brown PetscFunctionBegin; 733d7d60843SJed Brown if (stash->blocktype == MPI_DATATYPE_NULL) { 734d7d60843SJed Brown PetscInt bs2 = PetscSqr(stash->bs); 735d7d60843SJed Brown PetscMPIInt blocklens[2]; 736d7d60843SJed Brown MPI_Aint displs[2]; 737d7d60843SJed Brown MPI_Datatype types[2], stype; 738223b4c07SBarry Smith /* 739223b4c07SBarry Smith DummyBlock is a type having standard layout, even when PetscScalar is C++ std::complex. 740f41aa5efSJunchao Zhang std::complex itself has standard layout, so does DummyBlock, recursively. 741a5b23f4aSJose E. Roman To be compatible with C++ std::complex, complex implementations on GPUs must also have standard layout, 742f41aa5efSJunchao Zhang though they can have different alignment, e.g, 16 bytes for double complex, instead of 8 bytes as in GCC stdlibc++. 743f41aa5efSJunchao Zhang offsetof(type, member) only requires type to have standard layout. Ref. https://en.cppreference.com/w/cpp/types/offsetof. 744f41aa5efSJunchao Zhang 745f41aa5efSJunchao Zhang We can test if std::complex has standard layout with the following code: 746f41aa5efSJunchao Zhang #include <iostream> 747f41aa5efSJunchao Zhang #include <type_traits> 748f41aa5efSJunchao Zhang #include <complex> 749f41aa5efSJunchao Zhang int main() { 750f41aa5efSJunchao Zhang std::cout << std::boolalpha; 751f41aa5efSJunchao Zhang std::cout << std::is_standard_layout<std::complex<double> >::value << '\n'; 752f41aa5efSJunchao Zhang } 753f41aa5efSJunchao Zhang Output: true 7549503c6c6SJed Brown */ 7559371c9d4SSatish Balay struct DummyBlock { 7569371c9d4SSatish Balay PetscInt row, col; 7579371c9d4SSatish Balay PetscScalar vals; 7589371c9d4SSatish Balay }; 759d7d60843SJed Brown 7609503c6c6SJed Brown stash->blocktype_size = offsetof(struct DummyBlock, vals) + bs2 * sizeof(PetscScalar); 761d7d60843SJed Brown if (stash->blocktype_size % sizeof(PetscInt)) { /* Implies that PetscInt is larger and does not satisfy alignment without padding */ 762d7d60843SJed Brown stash->blocktype_size += sizeof(PetscInt) - stash->blocktype_size % sizeof(PetscInt); 763d7d60843SJed Brown } 7649566063dSJacob Faibussowitsch PetscCall(PetscSegBufferCreate(stash->blocktype_size, 1, &stash->segsendblocks)); 7659566063dSJacob Faibussowitsch PetscCall(PetscSegBufferCreate(stash->blocktype_size, 1, &stash->segrecvblocks)); 7669566063dSJacob Faibussowitsch PetscCall(PetscSegBufferCreate(sizeof(MatStashFrame), 1, &stash->segrecvframe)); 767d7d60843SJed Brown blocklens[0] = 2; 768d7d60843SJed Brown blocklens[1] = bs2; 7699503c6c6SJed Brown displs[0] = offsetof(struct DummyBlock, row); 7709503c6c6SJed Brown displs[1] = offsetof(struct DummyBlock, vals); 771d7d60843SJed Brown types[0] = MPIU_INT; 772d7d60843SJed Brown types[1] = MPIU_SCALAR; 7739566063dSJacob Faibussowitsch PetscCallMPI(MPI_Type_create_struct(2, blocklens, displs, types, &stype)); 7749566063dSJacob Faibussowitsch PetscCallMPI(MPI_Type_commit(&stype)); 7759566063dSJacob Faibussowitsch PetscCallMPI(MPI_Type_create_resized(stype, 0, stash->blocktype_size, &stash->blocktype)); 7769566063dSJacob Faibussowitsch PetscCallMPI(MPI_Type_commit(&stash->blocktype)); 7779566063dSJacob Faibussowitsch PetscCallMPI(MPI_Type_free(&stype)); 778d7d60843SJed Brown } 779*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 780d7d60843SJed Brown } 781d7d60843SJed Brown 782d7d60843SJed Brown /* Callback invoked after target rank has initiatied receive of rendezvous message. 783d7d60843SJed Brown * Here we post the main sends. 784d7d60843SJed Brown */ 785d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashBTSSend_Private(MPI_Comm comm, const PetscMPIInt tag[], PetscMPIInt rankid, PetscMPIInt rank, void *sdata, MPI_Request req[], void *ctx) 786d71ae5a4SJacob Faibussowitsch { 787d7d60843SJed Brown MatStash *stash = (MatStash *)ctx; 788d7d60843SJed Brown MatStashHeader *hdr = (MatStashHeader *)sdata; 789d7d60843SJed Brown 790d7d60843SJed Brown PetscFunctionBegin; 79108401ef6SPierre Jolivet PetscCheck(rank == stash->sendranks[rankid], comm, PETSC_ERR_PLIB, "BTS Send rank %d does not match sendranks[%d] %d", rank, rankid, stash->sendranks[rankid]); 7929566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(stash->sendframes[rankid].buffer, hdr->count, stash->blocktype, rank, tag[0], comm, &req[0])); 793d7d60843SJed Brown stash->sendframes[rankid].count = hdr->count; 794d7d60843SJed Brown stash->sendframes[rankid].pending = 1; 795*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 796d7d60843SJed Brown } 797d7d60843SJed Brown 798223b4c07SBarry Smith /* 799223b4c07SBarry Smith Callback invoked by target after receiving rendezvous message. 800223b4c07SBarry Smith Here we post the main recvs. 801d7d60843SJed Brown */ 802d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashBTSRecv_Private(MPI_Comm comm, const PetscMPIInt tag[], PetscMPIInt rank, void *rdata, MPI_Request req[], void *ctx) 803d71ae5a4SJacob Faibussowitsch { 804d7d60843SJed Brown MatStash *stash = (MatStash *)ctx; 805d7d60843SJed Brown MatStashHeader *hdr = (MatStashHeader *)rdata; 806d7d60843SJed Brown MatStashFrame *frame; 807d7d60843SJed Brown 808d7d60843SJed Brown PetscFunctionBegin; 8099566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(stash->segrecvframe, 1, &frame)); 8109566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGet(stash->segrecvblocks, hdr->count, &frame->buffer)); 8119566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(frame->buffer, hdr->count, stash->blocktype, rank, tag[0], comm, &req[0])); 812d7d60843SJed Brown frame->count = hdr->count; 813d7d60843SJed Brown frame->pending = 1; 814*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 815d7d60843SJed Brown } 816d7d60843SJed Brown 817d7d60843SJed Brown /* 818d7d60843SJed Brown * owners[] contains the ownership ranges; may be indexed by either blocks or scalars 819d7d60843SJed Brown */ 820d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashScatterBegin_BTS(Mat mat, MatStash *stash, PetscInt owners[]) 821d71ae5a4SJacob Faibussowitsch { 822d7d60843SJed Brown size_t nblocks; 823d7d60843SJed Brown char *sendblocks; 824d7d60843SJed Brown 825d7d60843SJed Brown PetscFunctionBegin; 82676bd3646SJed Brown if (PetscDefined(USE_DEBUG)) { /* make sure all processors are either in INSERTMODE or ADDMODE */ 8274b4eb8d3SJed Brown InsertMode addv; 8281c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce((PetscEnum *)&mat->insertmode, (PetscEnum *)&addv, 1, MPIU_ENUM, MPI_BOR, PetscObjectComm((PetscObject)mat))); 82908401ef6SPierre Jolivet PetscCheck(addv != (ADD_VALUES | INSERT_VALUES), PetscObjectComm((PetscObject)mat), PETSC_ERR_ARG_WRONGSTATE, "Some processors inserted others added"); 8304b4eb8d3SJed Brown } 8314b4eb8d3SJed Brown 8329566063dSJacob Faibussowitsch PetscCall(MatStashBlockTypeSetUp(stash)); 8339566063dSJacob Faibussowitsch PetscCall(MatStashSortCompress_Private(stash, mat->insertmode)); 8349566063dSJacob Faibussowitsch PetscCall(PetscSegBufferGetSize(stash->segsendblocks, &nblocks)); 8359566063dSJacob Faibussowitsch PetscCall(PetscSegBufferExtractInPlace(stash->segsendblocks, &sendblocks)); 83660f34548SJunchao Zhang if (stash->first_assembly_done) { /* Set up sendhdrs and sendframes for each rank that we sent before */ 83723b7d1baSJed Brown PetscInt i; 83823b7d1baSJed Brown size_t b; 83997da8949SJed Brown for (i = 0, b = 0; i < stash->nsendranks; i++) { 84097da8949SJed Brown stash->sendframes[i].buffer = &sendblocks[b * stash->blocktype_size]; 84197da8949SJed Brown /* sendhdr is never actually sent, but the count is used by MatStashBTSSend_Private */ 84297da8949SJed Brown stash->sendhdr[i].count = 0; /* Might remain empty (in which case we send a zero-sized message) if no values are communicated to that process */ 84397da8949SJed Brown for (; b < nblocks; b++) { 84497da8949SJed Brown MatStashBlock *sendblock_b = (MatStashBlock *)&sendblocks[b * stash->blocktype_size]; 845aed4548fSBarry Smith PetscCheck(sendblock_b->row >= owners[stash->sendranks[i]], stash->comm, PETSC_ERR_ARG_WRONG, "MAT_SUBSET_OFF_PROC_ENTRIES set, but row %" PetscInt_FMT " owned by %d not communicated in initial assembly", sendblock_b->row, stash->sendranks[i]); 84697da8949SJed Brown if (sendblock_b->row >= owners[stash->sendranks[i] + 1]) break; 84797da8949SJed Brown stash->sendhdr[i].count++; 84897da8949SJed Brown } 84997da8949SJed Brown } 85097da8949SJed Brown } else { /* Dynamically count and pack (first time) */ 85123b7d1baSJed Brown PetscInt sendno; 85223b7d1baSJed Brown size_t i, rowstart; 853d7d60843SJed Brown 854d7d60843SJed Brown /* Count number of send ranks and allocate for sends */ 855d7d60843SJed Brown stash->nsendranks = 0; 856d7d60843SJed Brown for (rowstart = 0; rowstart < nblocks;) { 8577e2ea869SJed Brown PetscInt owner; 858d7d60843SJed Brown MatStashBlock *sendblock_rowstart = (MatStashBlock *)&sendblocks[rowstart * stash->blocktype_size]; 8599566063dSJacob Faibussowitsch PetscCall(PetscFindInt(sendblock_rowstart->row, stash->size + 1, owners, &owner)); 860d7d60843SJed Brown if (owner < 0) owner = -(owner + 2); 861d7d60843SJed Brown for (i = rowstart + 1; i < nblocks; i++) { /* Move forward through a run of blocks with the same owner */ 862d7d60843SJed Brown MatStashBlock *sendblock_i = (MatStashBlock *)&sendblocks[i * stash->blocktype_size]; 8637e2ea869SJed Brown if (sendblock_i->row >= owners[owner + 1]) break; 864d7d60843SJed Brown } 865d7d60843SJed Brown stash->nsendranks++; 866d7d60843SJed Brown rowstart = i; 867d7d60843SJed Brown } 8689566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(stash->nsendranks, &stash->sendranks, stash->nsendranks, &stash->sendhdr, stash->nsendranks, &stash->sendframes)); 869d7d60843SJed Brown 870d7d60843SJed Brown /* Set up sendhdrs and sendframes */ 871d7d60843SJed Brown sendno = 0; 872d7d60843SJed Brown for (rowstart = 0; rowstart < nblocks;) { 873d7d60843SJed Brown PetscInt owner; 874d7d60843SJed Brown MatStashBlock *sendblock_rowstart = (MatStashBlock *)&sendblocks[rowstart * stash->blocktype_size]; 8759566063dSJacob Faibussowitsch PetscCall(PetscFindInt(sendblock_rowstart->row, stash->size + 1, owners, &owner)); 876d7d60843SJed Brown if (owner < 0) owner = -(owner + 2); 877d7d60843SJed Brown stash->sendranks[sendno] = owner; 878d7d60843SJed Brown for (i = rowstart + 1; i < nblocks; i++) { /* Move forward through a run of blocks with the same owner */ 879d7d60843SJed Brown MatStashBlock *sendblock_i = (MatStashBlock *)&sendblocks[i * stash->blocktype_size]; 8807e2ea869SJed Brown if (sendblock_i->row >= owners[owner + 1]) break; 881d7d60843SJed Brown } 882d7d60843SJed Brown stash->sendframes[sendno].buffer = sendblock_rowstart; 883d7d60843SJed Brown stash->sendframes[sendno].pending = 0; 884d7d60843SJed Brown stash->sendhdr[sendno].count = i - rowstart; 885d7d60843SJed Brown sendno++; 886d7d60843SJed Brown rowstart = i; 887d7d60843SJed Brown } 88808401ef6SPierre Jolivet PetscCheck(sendno == stash->nsendranks, stash->comm, PETSC_ERR_PLIB, "BTS counted %d sendranks, but %" PetscInt_FMT " sends", stash->nsendranks, sendno); 889d7d60843SJed Brown } 890d7d60843SJed Brown 8914b4eb8d3SJed Brown /* Encode insertmode on the outgoing messages. If we want to support more than two options, we would need a new 8924b4eb8d3SJed Brown * message or a dummy entry of some sort. */ 8934b4eb8d3SJed Brown if (mat->insertmode == INSERT_VALUES) { 89423b7d1baSJed Brown size_t i; 8954b4eb8d3SJed Brown for (i = 0; i < nblocks; i++) { 8964b4eb8d3SJed Brown MatStashBlock *sendblock_i = (MatStashBlock *)&sendblocks[i * stash->blocktype_size]; 8974b4eb8d3SJed Brown sendblock_i->row = -(sendblock_i->row + 1); 8984b4eb8d3SJed Brown } 8994b4eb8d3SJed Brown } 9004b4eb8d3SJed Brown 90160f34548SJunchao Zhang if (stash->first_assembly_done) { 90297da8949SJed Brown PetscMPIInt i, tag; 9039566063dSJacob Faibussowitsch PetscCall(PetscCommGetNewTag(stash->comm, &tag)); 90448a46eb9SPierre Jolivet for (i = 0; i < stash->nrecvranks; i++) PetscCall(MatStashBTSRecv_Private(stash->comm, &tag, stash->recvranks[i], &stash->recvhdr[i], &stash->recvreqs[i], stash)); 90548a46eb9SPierre Jolivet for (i = 0; i < stash->nsendranks; i++) PetscCall(MatStashBTSSend_Private(stash->comm, &tag, i, stash->sendranks[i], &stash->sendhdr[i], &stash->sendreqs[i], stash)); 90697da8949SJed Brown stash->use_status = PETSC_TRUE; /* Use count from message status. */ 90797da8949SJed Brown } else { 9089371c9d4SSatish Balay PetscCall(PetscCommBuildTwoSidedFReq(stash->comm, 1, MPIU_INT, stash->nsendranks, stash->sendranks, (PetscInt *)stash->sendhdr, &stash->nrecvranks, &stash->recvranks, (PetscInt *)&stash->recvhdr, 1, &stash->sendreqs, &stash->recvreqs, MatStashBTSSend_Private, MatStashBTSRecv_Private, stash)); 9099566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(stash->nrecvranks, &stash->some_indices, stash->nrecvranks, &stash->some_statuses)); 91097da8949SJed Brown stash->use_status = PETSC_FALSE; /* Use count from header instead of from message. */ 91197da8949SJed Brown } 912d7d60843SJed Brown 9139566063dSJacob Faibussowitsch PetscCall(PetscSegBufferExtractInPlace(stash->segrecvframe, &stash->recvframes)); 914d7d60843SJed Brown stash->recvframe_active = NULL; 915d7d60843SJed Brown stash->recvframe_i = 0; 916d7d60843SJed Brown stash->some_i = 0; 917d7d60843SJed Brown stash->some_count = 0; 918d7d60843SJed Brown stash->recvcount = 0; 91960f34548SJunchao Zhang stash->first_assembly_done = mat->assembly_subset; /* See the same logic in VecAssemblyBegin_MPI_BTS */ 9204b4eb8d3SJed Brown stash->insertmode = &mat->insertmode; 921*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 922d7d60843SJed Brown } 923d7d60843SJed Brown 924d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashScatterGetMesg_BTS(MatStash *stash, PetscMPIInt *n, PetscInt **row, PetscInt **col, PetscScalar **val, PetscInt *flg) 925d71ae5a4SJacob Faibussowitsch { 926d7d60843SJed Brown MatStashBlock *block; 927d7d60843SJed Brown 928d7d60843SJed Brown PetscFunctionBegin; 929d7d60843SJed Brown *flg = 0; 930d7d60843SJed Brown while (!stash->recvframe_active || stash->recvframe_i == stash->recvframe_count) { 931d7d60843SJed Brown if (stash->some_i == stash->some_count) { 932*3ba16761SJacob Faibussowitsch if (stash->recvcount == stash->nrecvranks) PetscFunctionReturn(PETSC_SUCCESS); /* Done */ 9339566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitsome(stash->nrecvranks, stash->recvreqs, &stash->some_count, stash->some_indices, stash->use_status ? stash->some_statuses : MPI_STATUSES_IGNORE)); 934d7d60843SJed Brown stash->some_i = 0; 935d7d60843SJed Brown } 936d7d60843SJed Brown stash->recvframe_active = &stash->recvframes[stash->some_indices[stash->some_i]]; 937d7d60843SJed Brown stash->recvframe_count = stash->recvframe_active->count; /* From header; maximum count */ 938d7d60843SJed Brown if (stash->use_status) { /* Count what was actually sent */ 9399566063dSJacob Faibussowitsch PetscCallMPI(MPI_Get_count(&stash->some_statuses[stash->some_i], stash->blocktype, &stash->recvframe_count)); 940d7d60843SJed Brown } 9414b4eb8d3SJed Brown if (stash->recvframe_count > 0) { /* Check for InsertMode consistency */ 9424b4eb8d3SJed Brown block = (MatStashBlock *)&((char *)stash->recvframe_active->buffer)[0]; 9434b4eb8d3SJed Brown if (PetscUnlikely(*stash->insertmode == NOT_SET_VALUES)) *stash->insertmode = block->row < 0 ? INSERT_VALUES : ADD_VALUES; 944aed4548fSBarry Smith PetscCheck(*stash->insertmode != INSERT_VALUES || block->row < 0, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Assembling INSERT_VALUES, but rank %d requested ADD_VALUES", stash->recvranks[stash->some_indices[stash->some_i]]); 945aed4548fSBarry Smith PetscCheck(*stash->insertmode != ADD_VALUES || block->row >= 0, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Assembling ADD_VALUES, but rank %d requested INSERT_VALUES", stash->recvranks[stash->some_indices[stash->some_i]]); 9464b4eb8d3SJed Brown } 947d7d60843SJed Brown stash->some_i++; 948d7d60843SJed Brown stash->recvcount++; 949d7d60843SJed Brown stash->recvframe_i = 0; 950d7d60843SJed Brown } 951d7d60843SJed Brown *n = 1; 952d7d60843SJed Brown block = (MatStashBlock *)&((char *)stash->recvframe_active->buffer)[stash->recvframe_i * stash->blocktype_size]; 9534b4eb8d3SJed Brown if (block->row < 0) block->row = -(block->row + 1); 954d7d60843SJed Brown *row = &block->row; 955d7d60843SJed Brown *col = &block->col; 956d7d60843SJed Brown *val = block->vals; 957d7d60843SJed Brown stash->recvframe_i++; 958d7d60843SJed Brown *flg = 1; 959*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 960d7d60843SJed Brown } 961d7d60843SJed Brown 962d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatStashScatterEnd_BTS(MatStash *stash) 963d71ae5a4SJacob Faibussowitsch { 964d7d60843SJed Brown PetscFunctionBegin; 9659566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(stash->nsendranks, stash->sendreqs, MPI_STATUSES_IGNORE)); 96660f34548SJunchao Zhang if (stash->first_assembly_done) { /* Reuse the communication contexts, so consolidate and reset segrecvblocks */ 967d2b3fd65SBarry Smith PetscCall(PetscSegBufferExtractInPlace(stash->segrecvblocks, NULL)); 9683575f486SJed Brown } else { /* No reuse, so collect everything. */ 9699566063dSJacob Faibussowitsch PetscCall(MatStashScatterDestroy_BTS(stash)); 97097da8949SJed Brown } 971d7d60843SJed Brown 972d7d60843SJed Brown /* Now update nmaxold to be app 10% more than max n used, this way the 973d7d60843SJed Brown wastage of space is reduced the next time this stash is used. 974d7d60843SJed Brown Also update the oldmax, only if it increases */ 975d7d60843SJed Brown if (stash->n) { 976d7d60843SJed Brown PetscInt bs2 = stash->bs * stash->bs; 977d7d60843SJed Brown PetscInt oldnmax = ((int)(stash->n * 1.1) + 5) * bs2; 978d7d60843SJed Brown if (oldnmax > stash->oldnmax) stash->oldnmax = oldnmax; 979d7d60843SJed Brown } 980d7d60843SJed Brown 981d7d60843SJed Brown stash->nmax = 0; 982d7d60843SJed Brown stash->n = 0; 983d7d60843SJed Brown stash->reallocs = -1; 984d7d60843SJed Brown stash->nprocessed = 0; 985d7d60843SJed Brown 9869566063dSJacob Faibussowitsch PetscCall(PetscMatStashSpaceDestroy(&stash->space_head)); 987d7d60843SJed Brown 988f4259b30SLisandro Dalcin stash->space = NULL; 989d7d60843SJed Brown 990*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 991d7d60843SJed Brown } 992d7d60843SJed Brown 993d71ae5a4SJacob Faibussowitsch PetscErrorCode MatStashScatterDestroy_BTS(MatStash *stash) 994d71ae5a4SJacob Faibussowitsch { 995d7d60843SJed Brown PetscFunctionBegin; 9969566063dSJacob Faibussowitsch PetscCall(PetscSegBufferDestroy(&stash->segsendblocks)); 9979566063dSJacob Faibussowitsch PetscCall(PetscSegBufferDestroy(&stash->segrecvframe)); 998d7d60843SJed Brown stash->recvframes = NULL; 9999566063dSJacob Faibussowitsch PetscCall(PetscSegBufferDestroy(&stash->segrecvblocks)); 100048a46eb9SPierre Jolivet if (stash->blocktype != MPI_DATATYPE_NULL) PetscCallMPI(MPI_Type_free(&stash->blocktype)); 1001d7d60843SJed Brown stash->nsendranks = 0; 1002d7d60843SJed Brown stash->nrecvranks = 0; 10039566063dSJacob Faibussowitsch PetscCall(PetscFree3(stash->sendranks, stash->sendhdr, stash->sendframes)); 10049566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->sendreqs)); 10059566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->recvreqs)); 10069566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->recvranks)); 10079566063dSJacob Faibussowitsch PetscCall(PetscFree(stash->recvhdr)); 10089566063dSJacob Faibussowitsch PetscCall(PetscFree2(stash->some_indices, stash->some_statuses)); 1009*3ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1010d7d60843SJed Brown } 10111667be42SBarry Smith #endif 1012