xref: /petsc/src/snes/interface/noise/snesmfj2.c (revision 38f2d2fdb3b6f522a3102c6eb796cebecf3224c0)
163dd3a1aSKris Buschelman #define PETSCSNES_DLL
2d2dddef7SLois Curfman McInnes 
3b9147fbbSdalcinl #include "include/private/snesimpl.h"   /*I  "petscsnes.h"   I*/
43ec795f1SBarry Smith #include "include/private/matimpl.h"
5d2dddef7SLois Curfman McInnes 
6dfbe8321SBarry Smith EXTERN PetscErrorCode DiffParameterCreate_More(SNES,Vec,void**);
7dfbe8321SBarry Smith EXTERN PetscErrorCode DiffParameterCompute_More(SNES,void*,Vec,Vec,PetscReal*,PetscReal*);
8dfbe8321SBarry Smith EXTERN PetscErrorCode DiffParameterDestroy_More(void*);
9d2dddef7SLois Curfman McInnes 
10d2dddef7SLois Curfman McInnes typedef struct {  /* default context for matrix-free SNES */
11d2dddef7SLois Curfman McInnes   SNES         snes;             /* SNES context */
12d2dddef7SLois Curfman McInnes   Vec          w;                /* work vector */
1374637425SBarry Smith   MatNullSpace sp;               /* null space context */
14145595abSSatish Balay   PetscReal    error_rel;        /* square root of relative error in computing function */
15145595abSSatish Balay   PetscReal    umin;             /* minimum allowable u'a value relative to |u|_1 */
16a7cc72afSBarry Smith   PetscTruth   jorge;            /* flag indicating use of Jorge's method for determining
17d2dddef7SLois Curfman McInnes                                    the differencing parameter */
18145595abSSatish Balay   PetscReal    h;                /* differencing parameter */
19a7cc72afSBarry Smith   PetscTruth   need_h;           /* flag indicating whether we must compute h */
20a7cc72afSBarry Smith   PetscTruth   need_err;         /* flag indicating whether we must currently compute error_rel */
21a7cc72afSBarry Smith   PetscTruth   compute_err;      /* flag indicating whether we must ever compute error_rel */
22a7cc72afSBarry Smith   PetscInt     compute_err_iter; /* last iter where we've computer error_rel */
23a7cc72afSBarry Smith   PetscInt     compute_err_freq; /* frequency of computing error_rel */
24d2dddef7SLois Curfman McInnes   void         *data;            /* implementation-specific data */
25d2dddef7SLois Curfman McInnes } MFCtx_Private;
26d2dddef7SLois Curfman McInnes 
274a2ae208SSatish Balay #undef __FUNCT__
284a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeDestroy2_Private" /* ADIC Ignore */
29dfbe8321SBarry Smith PetscErrorCode SNESMatrixFreeDestroy2_Private(Mat mat)
30d2dddef7SLois Curfman McInnes {
31dfbe8321SBarry Smith   PetscErrorCode ierr;
32d2dddef7SLois Curfman McInnes   MFCtx_Private  *ctx;
33d2dddef7SLois Curfman McInnes 
3407a3eed9SLois Curfman McInnes   PetscFunctionBegin;
35d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);
36d2dddef7SLois Curfman McInnes   ierr = VecDestroy(ctx->w);CHKERRQ(ierr);
3774637425SBarry Smith   if (ctx->sp) {ierr = MatNullSpaceDestroy(ctx->sp);CHKERRQ(ierr);}
38295f7fbbSLois Curfman McInnes   if (ctx->jorge || ctx->compute_err) {ierr = DiffParameterDestroy_More(ctx->data);CHKERRQ(ierr);}
39606d414cSSatish Balay   ierr = PetscFree(ctx);CHKERRQ(ierr);
4007a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
41d2dddef7SLois Curfman McInnes }
42d2dddef7SLois Curfman McInnes 
434a2ae208SSatish Balay #undef __FUNCT__
444a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeView2_Private" /* ADIC Ignore */
45d2dddef7SLois Curfman McInnes /*
46d2dddef7SLois Curfman McInnes    SNESMatrixFreeView2_Private - Views matrix-free parameters.
47d2dddef7SLois Curfman McInnes  */
48dfbe8321SBarry Smith PetscErrorCode SNESMatrixFreeView2_Private(Mat J,PetscViewer viewer)
49d2dddef7SLois Curfman McInnes {
50dfbe8321SBarry Smith   PetscErrorCode ierr;
51d2dddef7SLois Curfman McInnes   MFCtx_Private  *ctx;
5232077d6dSBarry Smith   PetscTruth     iascii;
53d2dddef7SLois Curfman McInnes 
5407a3eed9SLois Curfman McInnes   PetscFunctionBegin;
55d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(J,(void **)&ctx);CHKERRQ(ierr);
5632077d6dSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr);
5732077d6dSBarry Smith   if (iascii) {
58b0a32e0cSBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"  SNES matrix-free approximation:\n");CHKERRQ(ierr);
59758f395bSBarry Smith      if (ctx->jorge) {
60b0a32e0cSBarry Smith        ierr = PetscViewerASCIIPrintf(viewer,"    using Jorge's method of determining differencing parameter\n");CHKERRQ(ierr);
61758f395bSBarry Smith      }
62a83599f4SBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"    err=%G (relative error in function evaluation)\n",ctx->error_rel);CHKERRQ(ierr);
63a83599f4SBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"    umin=%G (minimum iterate parameter)\n",ctx->umin);CHKERRQ(ierr);
64758f395bSBarry Smith      if (ctx->compute_err) {
6577431f27SBarry Smith        ierr = PetscViewerASCIIPrintf(viewer,"    freq_err=%D (frequency for computing err)\n",ctx->compute_err_freq);CHKERRQ(ierr);
66d2dddef7SLois Curfman McInnes      }
67758f395bSBarry Smith   } else {
6879a5c55eSBarry Smith     SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported by SNES matrix free Jorge",((PetscObject)viewer)->type_name);
69758f395bSBarry Smith   }
7007a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
71d2dddef7SLois Curfman McInnes }
72d2dddef7SLois Curfman McInnes 
734a2ae208SSatish Balay #undef __FUNCT__
744a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeMult2_Private"
75d2dddef7SLois Curfman McInnes /*
76d2dddef7SLois Curfman McInnes   SNESMatrixFreeMult2_Private - Default matrix-free form for Jacobian-vector
77d2dddef7SLois Curfman McInnes   product, y = F'(u)*a:
78d2dddef7SLois Curfman McInnes         y = (F(u + ha) - F(u)) /h,
79d2dddef7SLois Curfman McInnes   where F = nonlinear function, as set by SNESSetFunction()
80d2dddef7SLois Curfman McInnes         u = current iterate
81d2dddef7SLois Curfman McInnes         h = difference interval
82d2dddef7SLois Curfman McInnes */
83dfbe8321SBarry Smith PetscErrorCode SNESMatrixFreeMult2_Private(Mat mat,Vec a,Vec y)
84d2dddef7SLois Curfman McInnes {
85d2dddef7SLois Curfman McInnes   MFCtx_Private  *ctx;
86d2dddef7SLois Curfman McInnes   SNES           snes;
87145595abSSatish Balay   PetscReal      h,norm,sum,umin,noise;
8879f36460SBarry Smith   PetscScalar    hs,dot;
89d2dddef7SLois Curfman McInnes   Vec            w,U,F;
90dfbe8321SBarry Smith   PetscErrorCode ierr,(*eval_fct)(SNES,Vec,Vec);
91e6ed2b1fSLois Curfman McInnes   MPI_Comm       comm;
9277431f27SBarry Smith   PetscInt       iter;
93d2dddef7SLois Curfman McInnes 
9407a3eed9SLois Curfman McInnes   PetscFunctionBegin;
9507a3eed9SLois Curfman McInnes 
96d2dddef7SLois Curfman McInnes   /* We log matrix-free matrix-vector products separately, so that we can
97d2dddef7SLois Curfman McInnes      separate the performance monitoring from the cases that use conventional
98d2dddef7SLois Curfman McInnes      storage.  We may eventually modify event logging to associate events
99d2dddef7SLois Curfman McInnes      with particular objects, hence alleviating the more general problem. */
1003ec795f1SBarry Smith   ierr = PetscLogEventBegin(MATMFFD_Mult,a,y,0,0);CHKERRQ(ierr);
101d2dddef7SLois Curfman McInnes 
1022d0c0e3bSBarry Smith   ierr = PetscObjectGetComm((PetscObject)mat,&comm);CHKERRQ(ierr);
103e6ed2b1fSLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr);
104e6ed2b1fSLois Curfman McInnes   snes = ctx->snes;
105e6ed2b1fSLois Curfman McInnes   w    = ctx->w;
106e6ed2b1fSLois Curfman McInnes   umin = ctx->umin;
107e6ed2b1fSLois Curfman McInnes 
108d2dddef7SLois Curfman McInnes   ierr = SNESGetSolution(snes,&U);CHKERRQ(ierr);
109d2dddef7SLois Curfman McInnes   eval_fct = SNESComputeFunction;
11074637425SBarry Smith   ierr = SNESGetFunction(snes,&F,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
111295f7fbbSLois Curfman McInnes 
112d2dddef7SLois Curfman McInnes   /* Determine a "good" step size, h */
113d2dddef7SLois Curfman McInnes   if (ctx->need_h) {
114d2dddef7SLois Curfman McInnes 
115d2dddef7SLois Curfman McInnes     /* Use Jorge's method to compute h */
116d2dddef7SLois Curfman McInnes     if (ctx->jorge) {
117d2dddef7SLois Curfman McInnes       ierr = DiffParameterCompute_More(snes,ctx->data,U,a,&noise,&h);CHKERRQ(ierr);
118d2dddef7SLois Curfman McInnes 
119d2dddef7SLois Curfman McInnes     /* Use the Brown/Saad method to compute h */
120d2dddef7SLois Curfman McInnes     } else {
121295f7fbbSLois Curfman McInnes       /* Compute error if desired */
122295f7fbbSLois Curfman McInnes       ierr = SNESGetIterationNumber(snes,&iter);CHKERRQ(ierr);
123145595abSSatish Balay       if ((ctx->need_err) || ((ctx->compute_err_freq) && (ctx->compute_err_iter != iter) && (!((iter-1)%ctx->compute_err_freq)))) {
124d2dddef7SLois Curfman McInnes         /* Use Jorge's method to compute noise */
125d2dddef7SLois Curfman McInnes         ierr = DiffParameterCompute_More(snes,ctx->data,U,a,&noise,&h);CHKERRQ(ierr);
126d2dddef7SLois Curfman McInnes         ctx->error_rel = sqrt(noise);
127ae15b995SBarry Smith         ierr = PetscInfo3(snes,"Using Jorge's noise: noise=%G, sqrt(noise)=%G, h_more=%G\n",noise,ctx->error_rel,h);CHKERRQ(ierr);
128295f7fbbSLois Curfman McInnes         ctx->compute_err_iter = iter;
1293b2a6d2fSBarry Smith         ctx->need_err = PETSC_FALSE;
130d2dddef7SLois Curfman McInnes       }
131e6ed2b1fSLois Curfman McInnes 
132691598edSBarry Smith       ierr = VecDotBegin(U,a,&dot);CHKERRQ(ierr);
133691598edSBarry Smith       ierr = VecNormBegin(a,NORM_1,&sum);CHKERRQ(ierr);
134691598edSBarry Smith       ierr = VecNormBegin(a,NORM_2,&norm);CHKERRQ(ierr);
135691598edSBarry Smith       ierr = VecDotEnd(U,a,&dot);CHKERRQ(ierr);
136691598edSBarry Smith       ierr = VecNormEnd(a,NORM_1,&sum);CHKERRQ(ierr);
137691598edSBarry Smith       ierr = VecNormEnd(a,NORM_2,&norm);CHKERRQ(ierr);
138e6ed2b1fSLois Curfman McInnes 
139d2dddef7SLois Curfman McInnes 
140d2dddef7SLois Curfman McInnes       /* Safeguard for step sizes too small */
141d2dddef7SLois Curfman McInnes       if (sum == 0.0) {dot = 1.0; norm = 1.0;}
142aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX)
143145595abSSatish Balay       else if (PetscAbsScalar(dot) < umin*sum && PetscRealPart(dot) >= 0.0) dot = umin*sum;
144145595abSSatish Balay       else if (PetscAbsScalar(dot) < 0.0 && PetscRealPart(dot) > -umin*sum) dot = -umin*sum;
145d2dddef7SLois Curfman McInnes #else
146d2dddef7SLois Curfman McInnes       else if (dot < umin*sum && dot >= 0.0) dot = umin*sum;
147d2dddef7SLois Curfman McInnes       else if (dot < 0.0 && dot > -umin*sum) dot = -umin*sum;
148d2dddef7SLois Curfman McInnes #endif
149145595abSSatish Balay       h = PetscRealPart(ctx->error_rel*dot/(norm*norm));
150d2dddef7SLois Curfman McInnes     }
151d2dddef7SLois Curfman McInnes   } else {
152d2dddef7SLois Curfman McInnes     h = ctx->h;
153d2dddef7SLois Curfman McInnes   }
154ae15b995SBarry Smith   if (!ctx->jorge || !ctx->need_h) {ierr = PetscInfo1(snes,"h = %G\n",h);CHKERRQ(ierr);}
155d2dddef7SLois Curfman McInnes 
156d2dddef7SLois Curfman McInnes   /* Evaluate function at F(u + ha) */
157db0b4b35SLois Curfman McInnes   hs = h;
1582dcb1b2aSMatthew Knepley   ierr = VecWAXPY(w,hs,a,U);CHKERRQ(ierr);
159d2dddef7SLois Curfman McInnes   ierr = eval_fct(snes,w,y);CHKERRQ(ierr);
16079f36460SBarry Smith   ierr = VecAXPY(y,-1.0,F);CHKERRQ(ierr);
16179f36460SBarry Smith   ierr = VecScale(y,1.0/hs);CHKERRQ(ierr);
16274637425SBarry Smith   if (ctx->sp) {ierr = MatNullSpaceRemove(ctx->sp,y,PETSC_NULL);CHKERRQ(ierr);}
163d2dddef7SLois Curfman McInnes 
1643ec795f1SBarry Smith   ierr = PetscLogEventEnd(MATMFFD_Mult,a,y,0,0);CHKERRQ(ierr);
16507a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
166d2dddef7SLois Curfman McInnes }
167d2dddef7SLois Curfman McInnes 
1684a2ae208SSatish Balay #undef __FUNCT__
16963dd3a1aSKris Buschelman #define __FUNCT__ "SNESMatrixFreeCreate2"
170d2dddef7SLois Curfman McInnes /*@C
17163dd3a1aSKris Buschelman    SNESMatrixFreeCreate2 - Creates a matrix-free matrix
172d2dddef7SLois Curfman McInnes    context for use with a SNES solver.  This matrix can be used as
173d2dddef7SLois Curfman McInnes    the Jacobian argument for the routine SNESSetJacobian().
174d2dddef7SLois Curfman McInnes 
175d2dddef7SLois Curfman McInnes    Input Parameters:
176d2dddef7SLois Curfman McInnes .  snes - the SNES context
177d2dddef7SLois Curfman McInnes .  x - vector where SNES solution is to be stored.
178d2dddef7SLois Curfman McInnes 
179d2dddef7SLois Curfman McInnes    Output Parameter:
180d2dddef7SLois Curfman McInnes .  J - the matrix-free matrix
181d2dddef7SLois Curfman McInnes 
18290c26489SBarry Smith    Level: advanced
18390c26489SBarry Smith 
184d2dddef7SLois Curfman McInnes    Notes:
185d2dddef7SLois Curfman McInnes    The matrix-free matrix context merely contains the function pointers
186d2dddef7SLois Curfman McInnes    and work space for performing finite difference approximations of
187d2dddef7SLois Curfman McInnes    Jacobian-vector products, J(u)*a, via
188d2dddef7SLois Curfman McInnes 
189d2dddef7SLois Curfman McInnes $       J(u)*a = [J(u+h*a) - J(u)]/h,
190d2dddef7SLois Curfman McInnes $   where by default
191d2dddef7SLois Curfman McInnes $        h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
192d2dddef7SLois Curfman McInnes $          = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   otherwise
193d2dddef7SLois Curfman McInnes $   where
194d2dddef7SLois Curfman McInnes $        error_rel = square root of relative error in
195d2dddef7SLois Curfman McInnes $                    function evaluation
196d2dddef7SLois Curfman McInnes $        umin = minimum iterate parameter
197d2dddef7SLois Curfman McInnes $   Alternatively, the differencing parameter, h, can be set using
198e6ed2b1fSLois Curfman McInnes $   Jorge's nifty new strategy if one specifies the option
199e6ed2b1fSLois Curfman McInnes $          -snes_mf_jorge
200d2dddef7SLois Curfman McInnes 
2013ec795f1SBarry Smith    The user can set these parameters via MatMFFDSetFunctionError().
202d2dddef7SLois Curfman McInnes    See the nonlinear solvers chapter of the users manual for details.
203d2dddef7SLois Curfman McInnes 
204d2dddef7SLois Curfman McInnes    The user should call MatDestroy() when finished with the matrix-free
205d2dddef7SLois Curfman McInnes    matrix context.
206d2dddef7SLois Curfman McInnes 
207d2dddef7SLois Curfman McInnes    Options Database Keys:
208d2dddef7SLois Curfman McInnes $  -snes_mf_err <error_rel>
209d2dddef7SLois Curfman McInnes $  -snes_mf_unim <umin>
210295f7fbbSLois Curfman McInnes $  -snes_mf_compute_err
211295f7fbbSLois Curfman McInnes $  -snes_mf_freq_err <freq>
212e6ed2b1fSLois Curfman McInnes $  -snes_mf_jorge
213d2dddef7SLois Curfman McInnes 
214d2dddef7SLois Curfman McInnes .keywords: SNES, default, matrix-free, create, matrix
215d2dddef7SLois Curfman McInnes 
2163ec795f1SBarry Smith .seealso: MatDestroy(), MatMFFDSetFunctionError()
217d2dddef7SLois Curfman McInnes @*/
21863dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT SNESDefaultMatrixFreeCreate2(SNES snes,Vec x,Mat *J)
219d2dddef7SLois Curfman McInnes {
220d2dddef7SLois Curfman McInnes   MPI_Comm       comm;
221d2dddef7SLois Curfman McInnes   MFCtx_Private  *mfctx;
2226849ba73SBarry Smith   PetscErrorCode ierr;
223a7cc72afSBarry Smith   PetscInt       n,nloc;
224145595abSSatish Balay   PetscTruth     flg;
225d2dddef7SLois Curfman McInnes   char           p[64];
226d2dddef7SLois Curfman McInnes 
22707a3eed9SLois Curfman McInnes   PetscFunctionBegin;
228*38f2d2fdSLisandro Dalcin   ierr = PetscNewLog(snes,MFCtx_Private,&mfctx);CHKERRQ(ierr);
229d2dddef7SLois Curfman McInnes   mfctx->sp   = 0;
230d2dddef7SLois Curfman McInnes   mfctx->snes = snes;
23177d8c4bbSBarry Smith   mfctx->error_rel        = PETSC_SQRT_MACHINE_EPSILON;
232d2dddef7SLois Curfman McInnes   mfctx->umin             = 1.e-6;
233d2dddef7SLois Curfman McInnes   mfctx->h                = 0.0;
234a7cc72afSBarry Smith   mfctx->need_h           = PETSC_TRUE;
235a7cc72afSBarry Smith   mfctx->need_err         = PETSC_FALSE;
236a7cc72afSBarry Smith   mfctx->compute_err      = PETSC_FALSE;
237295f7fbbSLois Curfman McInnes   mfctx->compute_err_freq = 0;
238295f7fbbSLois Curfman McInnes   mfctx->compute_err_iter = -1;
23987828ca2SBarry Smith   ierr = PetscOptionsGetReal(snes->prefix,"-snes_mf_err",&mfctx->error_rel,PETSC_NULL);CHKERRQ(ierr);
24087828ca2SBarry Smith   ierr = PetscOptionsGetReal(snes->prefix,"-snes_mf_umin",&mfctx->umin,PETSC_NULL);CHKERRQ(ierr);
241a7cc72afSBarry Smith   ierr = PetscOptionsHasName(snes->prefix,"-snes_mf_jorge",&mfctx->jorge);CHKERRQ(ierr);
242a7cc72afSBarry Smith   ierr = PetscOptionsHasName(snes->prefix,"-snes_mf_compute_err",&mfctx->compute_err);CHKERRQ(ierr);
243b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(snes->prefix,"-snes_mf_freq_err",&mfctx->compute_err_freq,&flg);CHKERRQ(ierr);
244295f7fbbSLois Curfman McInnes   if (flg) {
245295f7fbbSLois Curfman McInnes     if (mfctx->compute_err_freq < 0) mfctx->compute_err_freq = 0;
2463b2a6d2fSBarry Smith     mfctx->compute_err = PETSC_TRUE;
247295f7fbbSLois Curfman McInnes   }
2483b2a6d2fSBarry Smith   if (mfctx->compute_err) mfctx->need_err = PETSC_TRUE;
249295f7fbbSLois Curfman McInnes   if (mfctx->jorge || mfctx->compute_err) {
250d2dddef7SLois Curfman McInnes     ierr = DiffParameterCreate_More(snes,x,&mfctx->data);CHKERRQ(ierr);
251d2dddef7SLois Curfman McInnes   } else mfctx->data = 0;
252d2dddef7SLois Curfman McInnes 
253b0a32e0cSBarry Smith   ierr = PetscOptionsHasName(PETSC_NULL,"-help",&flg);CHKERRQ(ierr);
254549d3d68SSatish Balay   ierr = PetscStrcpy(p,"-");CHKERRQ(ierr);
255d2dddef7SLois Curfman McInnes   if (snes->prefix) PetscStrcat(p,snes->prefix);
256d2dddef7SLois Curfman McInnes   if (flg) {
257d132466eSBarry Smith     ierr = PetscPrintf(snes->comm," Matrix-free Options (via SNES):\n");CHKERRQ(ierr);
258a83599f4SBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_err <err>: set sqrt of relative error in function (default %G)\n",p,mfctx->error_rel);CHKERRQ(ierr);
259a83599f4SBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_umin <umin>: see users manual (default %G)\n",p,mfctx->umin);CHKERRQ(ierr);
260d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_jorge: use Jorge More's method\n",p);CHKERRQ(ierr);
261d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_compute_err: compute sqrt or relative error in function\n",p);CHKERRQ(ierr);
262d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_freq_err <freq>: frequency to recompute this (default only once)\n",p);CHKERRQ(ierr);
263d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_noise_file <file>: set file for printing noise info\n",p);CHKERRQ(ierr);
264d2dddef7SLois Curfman McInnes   }
265d2dddef7SLois Curfman McInnes   ierr = VecDuplicate(x,&mfctx->w);CHKERRQ(ierr);
266d2dddef7SLois Curfman McInnes   ierr = PetscObjectGetComm((PetscObject)x,&comm);CHKERRQ(ierr);
267d2dddef7SLois Curfman McInnes   ierr = VecGetSize(x,&n);CHKERRQ(ierr);
268d2dddef7SLois Curfman McInnes   ierr = VecGetLocalSize(x,&nloc);CHKERRQ(ierr);
269f69a0ea3SMatthew Knepley   ierr = MatCreate(comm,J);CHKERRQ(ierr);
270f69a0ea3SMatthew Knepley   ierr = MatSetSizes(*J,nloc,n,n,n);CHKERRQ(ierr);
271f204ca49SKris Buschelman   ierr = MatSetType(*J,MATSHELL);CHKERRQ(ierr);
272f204ca49SKris Buschelman   ierr = MatShellSetContext(*J,mfctx);CHKERRQ(ierr);
273c134de8dSSatish Balay   ierr = MatShellSetOperation(*J,MATOP_MULT,(void(*)(void))SNESMatrixFreeMult2_Private);CHKERRQ(ierr);
274c134de8dSSatish Balay   ierr = MatShellSetOperation(*J,MATOP_DESTROY,(void(*)(void))SNESMatrixFreeDestroy2_Private);CHKERRQ(ierr);
275c134de8dSSatish Balay   ierr = MatShellSetOperation(*J,MATOP_VIEW,(void(*)(void))SNESMatrixFreeView2_Private);CHKERRQ(ierr);
276d2dddef7SLois Curfman McInnes 
27752e6d16bSBarry Smith   ierr = PetscLogObjectParent(*J,mfctx->w);CHKERRQ(ierr);
27852e6d16bSBarry Smith   ierr = PetscLogObjectParent(snes,*J);CHKERRQ(ierr);
27907a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
280d2dddef7SLois Curfman McInnes }
281d2dddef7SLois Curfman McInnes 
2824a2ae208SSatish Balay #undef __FUNCT__
2834a2ae208SSatish Balay #define __FUNCT__ "SNESDefaultMatrixFreeSetParameters2"
28490c26489SBarry Smith /*@C
285758f395bSBarry Smith    SNESDefaultMatrixFreeSetParameters2 - Sets the parameters for the approximation of
286d2dddef7SLois Curfman McInnes    matrix-vector products using finite differences.
287d2dddef7SLois Curfman McInnes 
288d2dddef7SLois Curfman McInnes $       J(u)*a = [J(u+h*a) - J(u)]/h where
289d2dddef7SLois Curfman McInnes 
290d2dddef7SLois Curfman McInnes    either the user sets h directly here, or this parameter is computed via
291d2dddef7SLois Curfman McInnes 
292d2dddef7SLois Curfman McInnes $        h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
293d2dddef7SLois Curfman McInnes $          = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   else
294d2dddef7SLois Curfman McInnes $
295d2dddef7SLois Curfman McInnes 
296d2dddef7SLois Curfman McInnes    Input Parameters:
297758f395bSBarry Smith +  mat - the matrix
298d2dddef7SLois Curfman McInnes .  error_rel - relative error (should be set to the square root of
299d2dddef7SLois Curfman McInnes      the relative error in the function evaluations)
300d2dddef7SLois Curfman McInnes .  umin - minimum allowable u-value
301758f395bSBarry Smith -  h - differencing parameter
302d2dddef7SLois Curfman McInnes 
30390c26489SBarry Smith    Level: advanced
30490c26489SBarry Smith 
305d2dddef7SLois Curfman McInnes    Notes:
306d2dddef7SLois Curfman McInnes    If the user sets the parameter h directly, then this value will be used
307d2dddef7SLois Curfman McInnes    instead of the default computation indicated above.
308d2dddef7SLois Curfman McInnes 
309d2dddef7SLois Curfman McInnes .keywords: SNES, matrix-free, parameters
310d2dddef7SLois Curfman McInnes 
3115a655dc6SBarry Smith .seealso: MatCreateSNESMF()
312d2dddef7SLois Curfman McInnes @*/
31363dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT SNESDefaultMatrixFreeSetParameters2(Mat mat,PetscReal error,PetscReal umin,PetscReal h)
314d2dddef7SLois Curfman McInnes {
315d2dddef7SLois Curfman McInnes   MFCtx_Private  *ctx;
316dfbe8321SBarry Smith   PetscErrorCode ierr;
317d2dddef7SLois Curfman McInnes 
31807a3eed9SLois Curfman McInnes   PetscFunctionBegin;
319d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr);
320d2dddef7SLois Curfman McInnes   if (ctx) {
321d2dddef7SLois Curfman McInnes     if (error != PETSC_DEFAULT) ctx->error_rel = error;
322d2dddef7SLois Curfman McInnes     if (umin  != PETSC_DEFAULT) ctx->umin = umin;
323d2dddef7SLois Curfman McInnes     if (h     != PETSC_DEFAULT) {
324d2dddef7SLois Curfman McInnes       ctx->h = h;
325a7cc72afSBarry Smith       ctx->need_h = PETSC_FALSE;
326d2dddef7SLois Curfman McInnes     }
327d2dddef7SLois Curfman McInnes   }
32807a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
329d2dddef7SLois Curfman McInnes }
330d2dddef7SLois Curfman McInnes 
33163dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT SNESUnSetMatrixFreeParameter(SNES snes)
332d2dddef7SLois Curfman McInnes {
333d2dddef7SLois Curfman McInnes   MFCtx_Private  *ctx;
334dfbe8321SBarry Smith   PetscErrorCode ierr;
335d2dddef7SLois Curfman McInnes   Mat            mat;
336d2dddef7SLois Curfman McInnes 
33707a3eed9SLois Curfman McInnes   PetscFunctionBegin;
33874637425SBarry Smith   ierr = SNESGetJacobian(snes,&mat,PETSC_NULL,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
339d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr);
340a7cc72afSBarry Smith   if (ctx) ctx->need_h = PETSC_TRUE;
34107a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
342d2dddef7SLois Curfman McInnes }
343d2dddef7SLois Curfman McInnes 
344