xref: /petsc/src/snes/interface/noise/snesmfj2.c (revision 90c26489bd656b7157032361521c5c48582500c6)
173f4d377SMatthew Knepley /*$Id: snesmfj2.c,v 1.35 2001/08/21 21:03:55 bsmith Exp $*/
2d2dddef7SLois Curfman McInnes 
30a835dfdSSatish Balay #include "src/snes/snesimpl.h"   /*I  "petscsnes.h"   I*/
4d2dddef7SLois Curfman McInnes 
5ca44d042SBarry Smith EXTERN int DiffParameterCreate_More(SNES,Vec,void**);
6ca44d042SBarry Smith EXTERN int DiffParameterCompute_More(SNES,void*,Vec,Vec,PetscReal*,PetscReal*);
7ca44d042SBarry Smith EXTERN int DiffParameterDestroy_More(void*);
8d2dddef7SLois Curfman McInnes 
9d2dddef7SLois Curfman McInnes typedef struct {  /* default context for matrix-free SNES */
10d2dddef7SLois Curfman McInnes   SNES         snes;             /* SNES context */
11d2dddef7SLois Curfman McInnes   Vec          w;                /* work vector */
1274637425SBarry Smith   MatNullSpace sp;               /* null space context */
13145595abSSatish Balay   PetscReal    error_rel;        /* square root of relative error in computing function */
14145595abSSatish Balay   PetscReal    umin;             /* minimum allowable u'a value relative to |u|_1 */
15d2dddef7SLois Curfman McInnes   int          jorge;            /* flag indicating use of Jorge's method for determining
16d2dddef7SLois Curfman McInnes                                    the differencing parameter */
17145595abSSatish Balay   PetscReal    h;                /* differencing parameter */
18d2dddef7SLois Curfman McInnes   int          need_h;           /* flag indicating whether we must compute h */
19295f7fbbSLois Curfman McInnes   int          need_err;         /* flag indicating whether we must currently compute error_rel */
20295f7fbbSLois Curfman McInnes   int          compute_err;      /* flag indicating whether we must ever compute error_rel */
21295f7fbbSLois Curfman McInnes   int          compute_err_iter; /* last iter where we've computer error_rel */
22295f7fbbSLois Curfman McInnes   int          compute_err_freq; /* frequency of computing error_rel */
23d2dddef7SLois Curfman McInnes   void         *data;            /* implementation-specific data */
24d2dddef7SLois Curfman McInnes } MFCtx_Private;
25d2dddef7SLois Curfman McInnes 
264a2ae208SSatish Balay #undef __FUNCT__
274a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeDestroy2_Private" /* ADIC Ignore */
28f1d4f8a3SBarry Smith int SNESMatrixFreeDestroy2_Private(Mat mat)
29d2dddef7SLois Curfman McInnes {
30d2dddef7SLois Curfman McInnes   int           ierr;
31d2dddef7SLois Curfman McInnes   MFCtx_Private *ctx;
32d2dddef7SLois Curfman McInnes 
3307a3eed9SLois Curfman McInnes   PetscFunctionBegin;
34d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);
35d2dddef7SLois Curfman McInnes   ierr = VecDestroy(ctx->w);CHKERRQ(ierr);
3674637425SBarry Smith   if (ctx->sp) {ierr = MatNullSpaceDestroy(ctx->sp);CHKERRQ(ierr);}
37295f7fbbSLois Curfman McInnes   if (ctx->jorge || ctx->compute_err) {ierr = DiffParameterDestroy_More(ctx->data);CHKERRQ(ierr);}
38606d414cSSatish Balay   ierr = PetscFree(ctx);CHKERRQ(ierr);
3907a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
40d2dddef7SLois Curfman McInnes }
41d2dddef7SLois Curfman McInnes 
424a2ae208SSatish Balay #undef __FUNCT__
434a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeView2_Private" /* ADIC Ignore */
44d2dddef7SLois Curfman McInnes /*
45d2dddef7SLois Curfman McInnes    SNESMatrixFreeView2_Private - Views matrix-free parameters.
46d2dddef7SLois Curfman McInnes  */
47b0a32e0cSBarry Smith int SNESMatrixFreeView2_Private(Mat J,PetscViewer viewer)
48d2dddef7SLois Curfman McInnes {
49d2dddef7SLois Curfman McInnes   int           ierr;
50d2dddef7SLois Curfman McInnes   MFCtx_Private *ctx;
516831982aSBarry Smith   PetscTruth    isascii;
52d2dddef7SLois Curfman McInnes 
5307a3eed9SLois Curfman McInnes   PetscFunctionBegin;
54d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(J,(void **)&ctx);CHKERRQ(ierr);
55b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
560f5bd95cSBarry Smith   if (isascii) {
57b0a32e0cSBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"  SNES matrix-free approximation:\n");CHKERRQ(ierr);
58758f395bSBarry Smith      if (ctx->jorge) {
59b0a32e0cSBarry Smith        ierr = PetscViewerASCIIPrintf(viewer,"    using Jorge's method of determining differencing parameter\n");CHKERRQ(ierr);
60758f395bSBarry Smith      }
61b0a32e0cSBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"    err=%g (relative error in function evaluation)\n",ctx->error_rel);CHKERRQ(ierr);
62b0a32e0cSBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"    umin=%g (minimum iterate parameter)\n",ctx->umin);CHKERRQ(ierr);
63758f395bSBarry Smith      if (ctx->compute_err) {
64b0a32e0cSBarry Smith        ierr = PetscViewerASCIIPrintf(viewer,"    freq_err=%d (frequency for computing err)\n",ctx->compute_err_freq);CHKERRQ(ierr);
65d2dddef7SLois Curfman McInnes      }
66758f395bSBarry Smith   } else {
6729bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by SNES matrix free Jorge",((PetscObject)viewer)->type_name);
68758f395bSBarry Smith   }
6907a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
70d2dddef7SLois Curfman McInnes }
71d2dddef7SLois Curfman McInnes 
724a2ae208SSatish Balay #undef __FUNCT__
734a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeMult2_Private"
74d2dddef7SLois Curfman McInnes /*
75d2dddef7SLois Curfman McInnes   SNESMatrixFreeMult2_Private - Default matrix-free form for Jacobian-vector
76d2dddef7SLois Curfman McInnes   product, y = F'(u)*a:
77d2dddef7SLois Curfman McInnes         y = (F(u + ha) - F(u)) /h,
78d2dddef7SLois Curfman McInnes   where F = nonlinear function, as set by SNESSetFunction()
79d2dddef7SLois Curfman McInnes         u = current iterate
80d2dddef7SLois Curfman McInnes         h = difference interval
81d2dddef7SLois Curfman McInnes */
82d2dddef7SLois Curfman McInnes int SNESMatrixFreeMult2_Private(Mat mat,Vec a,Vec y)
83d2dddef7SLois Curfman McInnes {
84d2dddef7SLois Curfman McInnes   MFCtx_Private *ctx;
85d2dddef7SLois Curfman McInnes   SNES          snes;
86145595abSSatish Balay   PetscReal     h,norm,sum,umin,noise;
87ea709b57SSatish Balay   PetscScalar   hs,dot,mone = -1.0;
88d2dddef7SLois Curfman McInnes   Vec           w,U,F;
89295f7fbbSLois Curfman McInnes   int           ierr,iter,(*eval_fct)(SNES,Vec,Vec);
90e6ed2b1fSLois Curfman McInnes   MPI_Comm      comm;
91d2dddef7SLois Curfman McInnes 
9207a3eed9SLois Curfman McInnes   PetscFunctionBegin;
9307a3eed9SLois Curfman McInnes 
94d2dddef7SLois Curfman McInnes   /* We log matrix-free matrix-vector products separately, so that we can
95d2dddef7SLois Curfman McInnes      separate the performance monitoring from the cases that use conventional
96d2dddef7SLois Curfman McInnes      storage.  We may eventually modify event logging to associate events
97d2dddef7SLois Curfman McInnes      with particular objects, hence alleviating the more general problem. */
9852ed857cSBarry Smith   ierr = PetscLogEventBegin(MAT_MultMatrixFree,a,y,0,0);CHKERRQ(ierr);
99d2dddef7SLois Curfman McInnes 
1002d0c0e3bSBarry Smith   ierr = PetscObjectGetComm((PetscObject)mat,&comm);CHKERRQ(ierr);
101e6ed2b1fSLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr);
102e6ed2b1fSLois Curfman McInnes   snes = ctx->snes;
103e6ed2b1fSLois Curfman McInnes   w    = ctx->w;
104e6ed2b1fSLois Curfman McInnes   umin = ctx->umin;
105e6ed2b1fSLois Curfman McInnes 
106d2dddef7SLois Curfman McInnes   ierr = SNESGetSolution(snes,&U);CHKERRQ(ierr);
107d2dddef7SLois Curfman McInnes   if (snes->method_class == SNES_NONLINEAR_EQUATIONS) {
108d2dddef7SLois Curfman McInnes     eval_fct = SNESComputeFunction;
10974637425SBarry Smith     ierr = SNESGetFunction(snes,&F,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
110d2dddef7SLois Curfman McInnes   }
111d2dddef7SLois Curfman McInnes   else if (snes->method_class == SNES_UNCONSTRAINED_MINIMIZATION) {
112d2dddef7SLois Curfman McInnes     eval_fct = SNESComputeGradient;
113184914b5SBarry Smith     ierr = SNESGetGradient(snes,&F,PETSC_NULL);CHKERRQ(ierr);
114d2dddef7SLois Curfman McInnes   }
11529bbc08cSBarry Smith   else SETERRQ(1,"Invalid method class");
116d2dddef7SLois Curfman McInnes 
117295f7fbbSLois Curfman McInnes 
118d2dddef7SLois Curfman McInnes   /* Determine a "good" step size, h */
119d2dddef7SLois Curfman McInnes   if (ctx->need_h) {
120d2dddef7SLois Curfman McInnes 
121d2dddef7SLois Curfman McInnes     /* Use Jorge's method to compute h */
122d2dddef7SLois Curfman McInnes     if (ctx->jorge) {
123d2dddef7SLois Curfman McInnes       ierr = DiffParameterCompute_More(snes,ctx->data,U,a,&noise,&h);CHKERRQ(ierr);
124d2dddef7SLois Curfman McInnes 
125d2dddef7SLois Curfman McInnes     /* Use the Brown/Saad method to compute h */
126d2dddef7SLois Curfman McInnes     } else {
127295f7fbbSLois Curfman McInnes       /* Compute error if desired */
128295f7fbbSLois Curfman McInnes       ierr = SNESGetIterationNumber(snes,&iter);CHKERRQ(ierr);
129145595abSSatish Balay       if ((ctx->need_err) || ((ctx->compute_err_freq) && (ctx->compute_err_iter != iter) && (!((iter-1)%ctx->compute_err_freq)))) {
130d2dddef7SLois Curfman McInnes         /* Use Jorge's method to compute noise */
131d2dddef7SLois Curfman McInnes         ierr = DiffParameterCompute_More(snes,ctx->data,U,a,&noise,&h);CHKERRQ(ierr);
132d2dddef7SLois Curfman McInnes         ctx->error_rel = sqrt(noise);
133b0a32e0cSBarry Smith         PetscLogInfo(snes,"SNESMatrixFreeMult2_Private: Using Jorge's noise: noise=%g, sqrt(noise)=%g, h_more=%g\n",noise,ctx->error_rel,h);
134295f7fbbSLois Curfman McInnes         ctx->compute_err_iter = iter;
135d2dddef7SLois Curfman McInnes         ctx->need_err = 0;
136d2dddef7SLois Curfman McInnes       }
137e6ed2b1fSLois Curfman McInnes 
138691598edSBarry Smith       ierr = VecDotBegin(U,a,&dot);CHKERRQ(ierr);
139691598edSBarry Smith       ierr = VecNormBegin(a,NORM_1,&sum);CHKERRQ(ierr);
140691598edSBarry Smith       ierr = VecNormBegin(a,NORM_2,&norm);CHKERRQ(ierr);
141691598edSBarry Smith       ierr = VecDotEnd(U,a,&dot);CHKERRQ(ierr);
142691598edSBarry Smith       ierr = VecNormEnd(a,NORM_1,&sum);CHKERRQ(ierr);
143691598edSBarry Smith       ierr = VecNormEnd(a,NORM_2,&norm);CHKERRQ(ierr);
144e6ed2b1fSLois Curfman McInnes 
145d2dddef7SLois Curfman McInnes 
146d2dddef7SLois Curfman McInnes       /* Safeguard for step sizes too small */
147d2dddef7SLois Curfman McInnes       if (sum == 0.0) {dot = 1.0; norm = 1.0;}
148aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX)
149145595abSSatish Balay       else if (PetscAbsScalar(dot) < umin*sum && PetscRealPart(dot) >= 0.0) dot = umin*sum;
150145595abSSatish Balay       else if (PetscAbsScalar(dot) < 0.0 && PetscRealPart(dot) > -umin*sum) dot = -umin*sum;
151d2dddef7SLois Curfman McInnes #else
152d2dddef7SLois Curfman McInnes       else if (dot < umin*sum && dot >= 0.0) dot = umin*sum;
153d2dddef7SLois Curfman McInnes       else if (dot < 0.0 && dot > -umin*sum) dot = -umin*sum;
154d2dddef7SLois Curfman McInnes #endif
155145595abSSatish Balay       h = PetscRealPart(ctx->error_rel*dot/(norm*norm));
156d2dddef7SLois Curfman McInnes     }
157d2dddef7SLois Curfman McInnes   } else {
158d2dddef7SLois Curfman McInnes     h = ctx->h;
159d2dddef7SLois Curfman McInnes   }
160b0a32e0cSBarry Smith   if (!ctx->jorge || !ctx->need_h) PetscLogInfo(snes,"SNESMatrixFreeMult2_Private: h = %g\n",h);
161d2dddef7SLois Curfman McInnes 
162d2dddef7SLois Curfman McInnes   /* Evaluate function at F(u + ha) */
163db0b4b35SLois Curfman McInnes   hs = h;
164db0b4b35SLois Curfman McInnes   ierr = VecWAXPY(&hs,a,U,w);CHKERRQ(ierr);
165d2dddef7SLois Curfman McInnes   ierr = eval_fct(snes,w,y);CHKERRQ(ierr);
166d2dddef7SLois Curfman McInnes   ierr = VecAXPY(&mone,F,y);CHKERRQ(ierr);
167db0b4b35SLois Curfman McInnes   hs = 1.0/hs;
168db0b4b35SLois Curfman McInnes   ierr = VecScale(&hs,y);CHKERRQ(ierr);
16974637425SBarry Smith   if (ctx->sp) {ierr = MatNullSpaceRemove(ctx->sp,y,PETSC_NULL);CHKERRQ(ierr);}
170d2dddef7SLois Curfman McInnes 
17152ed857cSBarry Smith   ierr = PetscLogEventEnd(MAT_MultMatrixFree,a,y,0,0);CHKERRQ(ierr);
17207a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
173d2dddef7SLois Curfman McInnes }
174d2dddef7SLois Curfman McInnes 
1754a2ae208SSatish Balay #undef __FUNCT__
1764a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeMatCreate2"
177d2dddef7SLois Curfman McInnes /*@C
178d2dddef7SLois Curfman McInnes    SNESMatrixFreeMatCreate2 - Creates a matrix-free matrix
179d2dddef7SLois Curfman McInnes    context for use with a SNES solver.  This matrix can be used as
180d2dddef7SLois Curfman McInnes    the Jacobian argument for the routine SNESSetJacobian().
181d2dddef7SLois Curfman McInnes 
182d2dddef7SLois Curfman McInnes    Input Parameters:
183d2dddef7SLois Curfman McInnes .  snes - the SNES context
184d2dddef7SLois Curfman McInnes .  x - vector where SNES solution is to be stored.
185d2dddef7SLois Curfman McInnes 
186d2dddef7SLois Curfman McInnes    Output Parameter:
187d2dddef7SLois Curfman McInnes .  J - the matrix-free matrix
188d2dddef7SLois Curfman McInnes 
189*90c26489SBarry Smith    Level: advanced
190*90c26489SBarry Smith 
191d2dddef7SLois Curfman McInnes    Notes:
192d2dddef7SLois Curfman McInnes    The matrix-free matrix context merely contains the function pointers
193d2dddef7SLois Curfman McInnes    and work space for performing finite difference approximations of
194d2dddef7SLois Curfman McInnes    Jacobian-vector products, J(u)*a, via
195d2dddef7SLois Curfman McInnes 
196d2dddef7SLois Curfman McInnes $       J(u)*a = [J(u+h*a) - J(u)]/h,
197d2dddef7SLois Curfman McInnes $   where by default
198d2dddef7SLois Curfman McInnes $        h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
199d2dddef7SLois Curfman McInnes $          = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   otherwise
200d2dddef7SLois Curfman McInnes $   where
201d2dddef7SLois Curfman McInnes $        error_rel = square root of relative error in
202d2dddef7SLois Curfman McInnes $                    function evaluation
203d2dddef7SLois Curfman McInnes $        umin = minimum iterate parameter
204d2dddef7SLois Curfman McInnes $   Alternatively, the differencing parameter, h, can be set using
205e6ed2b1fSLois Curfman McInnes $   Jorge's nifty new strategy if one specifies the option
206e6ed2b1fSLois Curfman McInnes $          -snes_mf_jorge
207d2dddef7SLois Curfman McInnes 
2085a655dc6SBarry Smith    The user can set these parameters via MatSNESMFSetFunctionError().
209d2dddef7SLois Curfman McInnes    See the nonlinear solvers chapter of the users manual for details.
210d2dddef7SLois Curfman McInnes 
211d2dddef7SLois Curfman McInnes    The user should call MatDestroy() when finished with the matrix-free
212d2dddef7SLois Curfman McInnes    matrix context.
213d2dddef7SLois Curfman McInnes 
214d2dddef7SLois Curfman McInnes    Options Database Keys:
215d2dddef7SLois Curfman McInnes $  -snes_mf_err <error_rel>
216d2dddef7SLois Curfman McInnes $  -snes_mf_unim <umin>
217295f7fbbSLois Curfman McInnes $  -snes_mf_compute_err
218295f7fbbSLois Curfman McInnes $  -snes_mf_freq_err <freq>
219e6ed2b1fSLois Curfman McInnes $  -snes_mf_jorge
220d2dddef7SLois Curfman McInnes 
221d2dddef7SLois Curfman McInnes .keywords: SNES, default, matrix-free, create, matrix
222d2dddef7SLois Curfman McInnes 
2235a655dc6SBarry Smith .seealso: MatDestroy(), MatSNESMFSetFunctionError()
224d2dddef7SLois Curfman McInnes @*/
225758f395bSBarry Smith int SNESDefaultMatrixFreeCreate2(SNES snes,Vec x,Mat *J)
226d2dddef7SLois Curfman McInnes {
227d2dddef7SLois Curfman McInnes   MPI_Comm      comm;
228d2dddef7SLois Curfman McInnes   MFCtx_Private *mfctx;
229145595abSSatish Balay   int           n,nloc,ierr;
230145595abSSatish Balay   PetscTruth    flg;
231d2dddef7SLois Curfman McInnes   char          p[64];
232d2dddef7SLois Curfman McInnes 
23307a3eed9SLois Curfman McInnes   PetscFunctionBegin;
23482502324SSatish Balay   ierr = PetscNew(MFCtx_Private,&mfctx);CHKERRQ(ierr);
235549d3d68SSatish Balay   ierr  = PetscMemzero(mfctx,sizeof(MFCtx_Private));CHKERRQ(ierr);
236b0a32e0cSBarry Smith   PetscLogObjectMemory(snes,sizeof(MFCtx_Private));
237d2dddef7SLois Curfman McInnes   mfctx->sp   = 0;
238d2dddef7SLois Curfman McInnes   mfctx->snes = snes;
23977d8c4bbSBarry Smith   mfctx->error_rel        = PETSC_SQRT_MACHINE_EPSILON;
240d2dddef7SLois Curfman McInnes   mfctx->umin             = 1.e-6;
241d2dddef7SLois Curfman McInnes   mfctx->h                = 0.0;
242d2dddef7SLois Curfman McInnes   mfctx->need_h           = 1;
243d2dddef7SLois Curfman McInnes   mfctx->need_err         = 0;
244295f7fbbSLois Curfman McInnes   mfctx->compute_err      = 0;
245295f7fbbSLois Curfman McInnes   mfctx->compute_err_freq = 0;
246295f7fbbSLois Curfman McInnes   mfctx->compute_err_iter = -1;
24787828ca2SBarry Smith   ierr = PetscOptionsGetReal(snes->prefix,"-snes_mf_err",&mfctx->error_rel,PETSC_NULL);CHKERRQ(ierr);
24887828ca2SBarry Smith   ierr = PetscOptionsGetReal(snes->prefix,"-snes_mf_umin",&mfctx->umin,PETSC_NULL);CHKERRQ(ierr);
24952ed857cSBarry Smith   ierr = PetscOptionsHasName(snes->prefix,"-snes_mf_jorge",(PetscTruth*)&mfctx->jorge);CHKERRQ(ierr);
25052ed857cSBarry Smith   ierr = PetscOptionsHasName(snes->prefix,"-snes_mf_compute_err",(PetscTruth*)&mfctx->compute_err);CHKERRQ(ierr);
251b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(snes->prefix,"-snes_mf_freq_err",&mfctx->compute_err_freq,&flg);CHKERRQ(ierr);
252295f7fbbSLois Curfman McInnes   if (flg) {
253295f7fbbSLois Curfman McInnes     if (mfctx->compute_err_freq < 0) mfctx->compute_err_freq = 0;
254295f7fbbSLois Curfman McInnes     mfctx->compute_err = 1;
255295f7fbbSLois Curfman McInnes   }
256295f7fbbSLois Curfman McInnes   if (mfctx->compute_err == 1) mfctx->need_err = 1;
257295f7fbbSLois Curfman McInnes   if (mfctx->jorge || mfctx->compute_err) {
258d2dddef7SLois Curfman McInnes     ierr = DiffParameterCreate_More(snes,x,&mfctx->data);CHKERRQ(ierr);
259d2dddef7SLois Curfman McInnes   } else mfctx->data = 0;
260d2dddef7SLois Curfman McInnes 
261b0a32e0cSBarry Smith   ierr = PetscOptionsHasName(PETSC_NULL,"-help",&flg);CHKERRQ(ierr);
262549d3d68SSatish Balay   ierr = PetscStrcpy(p,"-");CHKERRQ(ierr);
263d2dddef7SLois Curfman McInnes   if (snes->prefix) PetscStrcat(p,snes->prefix);
264d2dddef7SLois Curfman McInnes   if (flg) {
265d132466eSBarry Smith     ierr = PetscPrintf(snes->comm," Matrix-free Options (via SNES):\n");CHKERRQ(ierr);
266d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_err <err>: set sqrt of relative error in function (default %g)\n",p,mfctx->error_rel);CHKERRQ(ierr);
267d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_umin <umin>: see users manual (default %g)\n",p,mfctx->umin);CHKERRQ(ierr);
268d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_jorge: use Jorge More's method\n",p);CHKERRQ(ierr);
269d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_compute_err: compute sqrt or relative error in function\n",p);CHKERRQ(ierr);
270d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_freq_err <freq>: frequency to recompute this (default only once)\n",p);CHKERRQ(ierr);
271d132466eSBarry Smith     ierr = PetscPrintf(snes->comm,"   %ssnes_mf_noise_file <file>: set file for printing noise info\n",p);CHKERRQ(ierr);
272d2dddef7SLois Curfman McInnes   }
273d2dddef7SLois Curfman McInnes   ierr = VecDuplicate(x,&mfctx->w);CHKERRQ(ierr);
274d2dddef7SLois Curfman McInnes   ierr = PetscObjectGetComm((PetscObject)x,&comm);CHKERRQ(ierr);
275d2dddef7SLois Curfman McInnes   ierr = VecGetSize(x,&n);CHKERRQ(ierr);
276d2dddef7SLois Curfman McInnes   ierr = VecGetLocalSize(x,&nloc);CHKERRQ(ierr);
277d2dddef7SLois Curfman McInnes   ierr = MatCreateShell(comm,nloc,n,n,n,mfctx,J);CHKERRQ(ierr);
278c134de8dSSatish Balay   ierr = MatShellSetOperation(*J,MATOP_MULT,(void(*)(void))SNESMatrixFreeMult2_Private);CHKERRQ(ierr);
279c134de8dSSatish Balay   ierr = MatShellSetOperation(*J,MATOP_DESTROY,(void(*)(void))SNESMatrixFreeDestroy2_Private);CHKERRQ(ierr);
280c134de8dSSatish Balay   ierr = MatShellSetOperation(*J,MATOP_VIEW,(void(*)(void))SNESMatrixFreeView2_Private);CHKERRQ(ierr);
281d2dddef7SLois Curfman McInnes 
282b0a32e0cSBarry Smith   PetscLogObjectParent(*J,mfctx->w);
283b0a32e0cSBarry Smith   PetscLogObjectParent(snes,*J);
28407a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
285d2dddef7SLois Curfman McInnes }
286d2dddef7SLois Curfman McInnes 
2874a2ae208SSatish Balay #undef __FUNCT__
2884a2ae208SSatish Balay #define __FUNCT__ "SNESDefaultMatrixFreeSetParameters2"
289*90c26489SBarry Smith /*@C
290758f395bSBarry Smith    SNESDefaultMatrixFreeSetParameters2 - Sets the parameters for the approximation of
291d2dddef7SLois Curfman McInnes    matrix-vector products using finite differences.
292d2dddef7SLois Curfman McInnes 
293d2dddef7SLois Curfman McInnes $       J(u)*a = [J(u+h*a) - J(u)]/h where
294d2dddef7SLois Curfman McInnes 
295d2dddef7SLois Curfman McInnes    either the user sets h directly here, or this parameter is computed via
296d2dddef7SLois Curfman McInnes 
297d2dddef7SLois Curfman McInnes $        h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
298d2dddef7SLois Curfman McInnes $          = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   else
299d2dddef7SLois Curfman McInnes $
300d2dddef7SLois Curfman McInnes 
301d2dddef7SLois Curfman McInnes    Input Parameters:
302758f395bSBarry Smith +  mat - the matrix
303d2dddef7SLois Curfman McInnes .  error_rel - relative error (should be set to the square root of
304d2dddef7SLois Curfman McInnes      the relative error in the function evaluations)
305d2dddef7SLois Curfman McInnes .  umin - minimum allowable u-value
306758f395bSBarry Smith -  h - differencing parameter
307d2dddef7SLois Curfman McInnes 
308*90c26489SBarry Smith    Level: advanced
309*90c26489SBarry Smith 
310d2dddef7SLois Curfman McInnes    Notes:
311d2dddef7SLois Curfman McInnes    If the user sets the parameter h directly, then this value will be used
312d2dddef7SLois Curfman McInnes    instead of the default computation indicated above.
313d2dddef7SLois Curfman McInnes 
314d2dddef7SLois Curfman McInnes .keywords: SNES, matrix-free, parameters
315d2dddef7SLois Curfman McInnes 
3165a655dc6SBarry Smith .seealso: MatCreateSNESMF()
317d2dddef7SLois Curfman McInnes @*/
318145595abSSatish Balay int SNESDefaultMatrixFreeSetParameters2(Mat mat,PetscReal error,PetscReal umin,PetscReal h)
319d2dddef7SLois Curfman McInnes {
320d2dddef7SLois Curfman McInnes   MFCtx_Private *ctx;
321d2dddef7SLois Curfman McInnes   int           ierr;
322d2dddef7SLois Curfman McInnes 
32307a3eed9SLois Curfman McInnes   PetscFunctionBegin;
324d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr);
325d2dddef7SLois Curfman McInnes   if (ctx) {
326d2dddef7SLois Curfman McInnes     if (error != PETSC_DEFAULT) ctx->error_rel = error;
327d2dddef7SLois Curfman McInnes     if (umin  != PETSC_DEFAULT) ctx->umin = umin;
328d2dddef7SLois Curfman McInnes     if (h     != PETSC_DEFAULT) {
329d2dddef7SLois Curfman McInnes       ctx->h = h;
330d2dddef7SLois Curfman McInnes       ctx->need_h = 0;
331d2dddef7SLois Curfman McInnes     }
332d2dddef7SLois Curfman McInnes   }
33307a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
334d2dddef7SLois Curfman McInnes }
335d2dddef7SLois Curfman McInnes 
336d2dddef7SLois Curfman McInnes int SNESUnSetMatrixFreeParameter(SNES snes)
337d2dddef7SLois Curfman McInnes {
338d2dddef7SLois Curfman McInnes   MFCtx_Private *ctx;
339d2dddef7SLois Curfman McInnes   int           ierr;
340d2dddef7SLois Curfman McInnes   Mat           mat;
341d2dddef7SLois Curfman McInnes 
34207a3eed9SLois Curfman McInnes   PetscFunctionBegin;
34374637425SBarry Smith   ierr = SNESGetJacobian(snes,&mat,PETSC_NULL,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
344d2dddef7SLois Curfman McInnes   ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr);
345d2dddef7SLois Curfman McInnes   if (ctx) ctx->need_h = 1;
34607a3eed9SLois Curfman McInnes   PetscFunctionReturn(0);
347d2dddef7SLois Curfman McInnes }
348d2dddef7SLois Curfman McInnes 
349