163dd3a1aSKris Buschelman #define PETSCSNES_DLL 2d2dddef7SLois Curfman McInnes 30a835dfdSSatish Balay #include "src/snes/snesimpl.h" /*I "petscsnes.h" I*/ 4d2dddef7SLois Curfman McInnes 5dfbe8321SBarry Smith EXTERN PetscErrorCode DiffParameterCreate_More(SNES,Vec,void**); 6dfbe8321SBarry Smith EXTERN PetscErrorCode DiffParameterCompute_More(SNES,void*,Vec,Vec,PetscReal*,PetscReal*); 7dfbe8321SBarry Smith EXTERN PetscErrorCode DiffParameterDestroy_More(void*); 8d2dddef7SLois Curfman McInnes 9d2dddef7SLois Curfman McInnes typedef struct { /* default context for matrix-free SNES */ 10d2dddef7SLois Curfman McInnes SNES snes; /* SNES context */ 11d2dddef7SLois Curfman McInnes Vec w; /* work vector */ 1274637425SBarry Smith MatNullSpace sp; /* null space context */ 13145595abSSatish Balay PetscReal error_rel; /* square root of relative error in computing function */ 14145595abSSatish Balay PetscReal umin; /* minimum allowable u'a value relative to |u|_1 */ 15a7cc72afSBarry Smith PetscTruth jorge; /* flag indicating use of Jorge's method for determining 16d2dddef7SLois Curfman McInnes the differencing parameter */ 17145595abSSatish Balay PetscReal h; /* differencing parameter */ 18a7cc72afSBarry Smith PetscTruth need_h; /* flag indicating whether we must compute h */ 19a7cc72afSBarry Smith PetscTruth need_err; /* flag indicating whether we must currently compute error_rel */ 20a7cc72afSBarry Smith PetscTruth compute_err; /* flag indicating whether we must ever compute error_rel */ 21a7cc72afSBarry Smith PetscInt compute_err_iter; /* last iter where we've computer error_rel */ 22a7cc72afSBarry Smith PetscInt compute_err_freq; /* frequency of computing error_rel */ 23d2dddef7SLois Curfman McInnes void *data; /* implementation-specific data */ 24d2dddef7SLois Curfman McInnes } MFCtx_Private; 25d2dddef7SLois Curfman McInnes 264a2ae208SSatish Balay #undef __FUNCT__ 274a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeDestroy2_Private" /* ADIC Ignore */ 28dfbe8321SBarry Smith PetscErrorCode SNESMatrixFreeDestroy2_Private(Mat mat) 29d2dddef7SLois Curfman McInnes { 30dfbe8321SBarry Smith PetscErrorCode ierr; 31d2dddef7SLois Curfman McInnes MFCtx_Private *ctx; 32d2dddef7SLois Curfman McInnes 3307a3eed9SLois Curfman McInnes PetscFunctionBegin; 34d2dddef7SLois Curfman McInnes ierr = MatShellGetContext(mat,(void **)&ctx); 35d2dddef7SLois Curfman McInnes ierr = VecDestroy(ctx->w);CHKERRQ(ierr); 3674637425SBarry Smith if (ctx->sp) {ierr = MatNullSpaceDestroy(ctx->sp);CHKERRQ(ierr);} 37295f7fbbSLois Curfman McInnes if (ctx->jorge || ctx->compute_err) {ierr = DiffParameterDestroy_More(ctx->data);CHKERRQ(ierr);} 38606d414cSSatish Balay ierr = PetscFree(ctx);CHKERRQ(ierr); 3907a3eed9SLois Curfman McInnes PetscFunctionReturn(0); 40d2dddef7SLois Curfman McInnes } 41d2dddef7SLois Curfman McInnes 424a2ae208SSatish Balay #undef __FUNCT__ 434a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeView2_Private" /* ADIC Ignore */ 44d2dddef7SLois Curfman McInnes /* 45d2dddef7SLois Curfman McInnes SNESMatrixFreeView2_Private - Views matrix-free parameters. 46d2dddef7SLois Curfman McInnes */ 47dfbe8321SBarry Smith PetscErrorCode SNESMatrixFreeView2_Private(Mat J,PetscViewer viewer) 48d2dddef7SLois Curfman McInnes { 49dfbe8321SBarry Smith PetscErrorCode ierr; 50d2dddef7SLois Curfman McInnes MFCtx_Private *ctx; 5132077d6dSBarry Smith PetscTruth iascii; 52d2dddef7SLois Curfman McInnes 5307a3eed9SLois Curfman McInnes PetscFunctionBegin; 54d2dddef7SLois Curfman McInnes ierr = MatShellGetContext(J,(void **)&ctx);CHKERRQ(ierr); 5532077d6dSBarry Smith ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr); 5632077d6dSBarry Smith if (iascii) { 57b0a32e0cSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," SNES matrix-free approximation:\n");CHKERRQ(ierr); 58758f395bSBarry Smith if (ctx->jorge) { 59b0a32e0cSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," using Jorge's method of determining differencing parameter\n");CHKERRQ(ierr); 60758f395bSBarry Smith } 61*a83599f4SBarry Smith ierr = PetscViewerASCIIPrintf(viewer," err=%G (relative error in function evaluation)\n",ctx->error_rel);CHKERRQ(ierr); 62*a83599f4SBarry Smith ierr = PetscViewerASCIIPrintf(viewer," umin=%G (minimum iterate parameter)\n",ctx->umin);CHKERRQ(ierr); 63758f395bSBarry Smith if (ctx->compute_err) { 6477431f27SBarry Smith ierr = PetscViewerASCIIPrintf(viewer," freq_err=%D (frequency for computing err)\n",ctx->compute_err_freq);CHKERRQ(ierr); 65d2dddef7SLois Curfman McInnes } 66758f395bSBarry Smith } else { 6779a5c55eSBarry Smith SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported by SNES matrix free Jorge",((PetscObject)viewer)->type_name); 68758f395bSBarry Smith } 6907a3eed9SLois Curfman McInnes PetscFunctionReturn(0); 70d2dddef7SLois Curfman McInnes } 71d2dddef7SLois Curfman McInnes 724a2ae208SSatish Balay #undef __FUNCT__ 734a2ae208SSatish Balay #define __FUNCT__ "SNESMatrixFreeMult2_Private" 74d2dddef7SLois Curfman McInnes /* 75d2dddef7SLois Curfman McInnes SNESMatrixFreeMult2_Private - Default matrix-free form for Jacobian-vector 76d2dddef7SLois Curfman McInnes product, y = F'(u)*a: 77d2dddef7SLois Curfman McInnes y = (F(u + ha) - F(u)) /h, 78d2dddef7SLois Curfman McInnes where F = nonlinear function, as set by SNESSetFunction() 79d2dddef7SLois Curfman McInnes u = current iterate 80d2dddef7SLois Curfman McInnes h = difference interval 81d2dddef7SLois Curfman McInnes */ 82dfbe8321SBarry Smith PetscErrorCode SNESMatrixFreeMult2_Private(Mat mat,Vec a,Vec y) 83d2dddef7SLois Curfman McInnes { 84d2dddef7SLois Curfman McInnes MFCtx_Private *ctx; 85d2dddef7SLois Curfman McInnes SNES snes; 86145595abSSatish Balay PetscReal h,norm,sum,umin,noise; 8779f36460SBarry Smith PetscScalar hs,dot; 88d2dddef7SLois Curfman McInnes Vec w,U,F; 89dfbe8321SBarry Smith PetscErrorCode ierr,(*eval_fct)(SNES,Vec,Vec); 90e6ed2b1fSLois Curfman McInnes MPI_Comm comm; 9177431f27SBarry Smith PetscInt iter; 92d2dddef7SLois Curfman McInnes 9307a3eed9SLois Curfman McInnes PetscFunctionBegin; 9407a3eed9SLois Curfman McInnes 95d2dddef7SLois Curfman McInnes /* We log matrix-free matrix-vector products separately, so that we can 96d2dddef7SLois Curfman McInnes separate the performance monitoring from the cases that use conventional 97d2dddef7SLois Curfman McInnes storage. We may eventually modify event logging to associate events 98d2dddef7SLois Curfman McInnes with particular objects, hence alleviating the more general problem. */ 9946129b97SKris Buschelman ierr = PetscLogEventBegin(MATSNESMF_Mult,a,y,0,0);CHKERRQ(ierr); 100d2dddef7SLois Curfman McInnes 1012d0c0e3bSBarry Smith ierr = PetscObjectGetComm((PetscObject)mat,&comm);CHKERRQ(ierr); 102e6ed2b1fSLois Curfman McInnes ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr); 103e6ed2b1fSLois Curfman McInnes snes = ctx->snes; 104e6ed2b1fSLois Curfman McInnes w = ctx->w; 105e6ed2b1fSLois Curfman McInnes umin = ctx->umin; 106e6ed2b1fSLois Curfman McInnes 107d2dddef7SLois Curfman McInnes ierr = SNESGetSolution(snes,&U);CHKERRQ(ierr); 108d2dddef7SLois Curfman McInnes eval_fct = SNESComputeFunction; 10974637425SBarry Smith ierr = SNESGetFunction(snes,&F,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr); 110295f7fbbSLois Curfman McInnes 111d2dddef7SLois Curfman McInnes /* Determine a "good" step size, h */ 112d2dddef7SLois Curfman McInnes if (ctx->need_h) { 113d2dddef7SLois Curfman McInnes 114d2dddef7SLois Curfman McInnes /* Use Jorge's method to compute h */ 115d2dddef7SLois Curfman McInnes if (ctx->jorge) { 116d2dddef7SLois Curfman McInnes ierr = DiffParameterCompute_More(snes,ctx->data,U,a,&noise,&h);CHKERRQ(ierr); 117d2dddef7SLois Curfman McInnes 118d2dddef7SLois Curfman McInnes /* Use the Brown/Saad method to compute h */ 119d2dddef7SLois Curfman McInnes } else { 120295f7fbbSLois Curfman McInnes /* Compute error if desired */ 121295f7fbbSLois Curfman McInnes ierr = SNESGetIterationNumber(snes,&iter);CHKERRQ(ierr); 122145595abSSatish Balay if ((ctx->need_err) || ((ctx->compute_err_freq) && (ctx->compute_err_iter != iter) && (!((iter-1)%ctx->compute_err_freq)))) { 123d2dddef7SLois Curfman McInnes /* Use Jorge's method to compute noise */ 124d2dddef7SLois Curfman McInnes ierr = DiffParameterCompute_More(snes,ctx->data,U,a,&noise,&h);CHKERRQ(ierr); 125d2dddef7SLois Curfman McInnes ctx->error_rel = sqrt(noise); 126*a83599f4SBarry Smith ierr = PetscVerboseInfo((snes,"SNESMatrixFreeMult2_Private: Using Jorge's noise: noise=%G, sqrt(noise)=%G, h_more=%G\n",noise,ctx->error_rel,h));CHKERRQ(ierr); 127295f7fbbSLois Curfman McInnes ctx->compute_err_iter = iter; 1283b2a6d2fSBarry Smith ctx->need_err = PETSC_FALSE; 129d2dddef7SLois Curfman McInnes } 130e6ed2b1fSLois Curfman McInnes 131691598edSBarry Smith ierr = VecDotBegin(U,a,&dot);CHKERRQ(ierr); 132691598edSBarry Smith ierr = VecNormBegin(a,NORM_1,&sum);CHKERRQ(ierr); 133691598edSBarry Smith ierr = VecNormBegin(a,NORM_2,&norm);CHKERRQ(ierr); 134691598edSBarry Smith ierr = VecDotEnd(U,a,&dot);CHKERRQ(ierr); 135691598edSBarry Smith ierr = VecNormEnd(a,NORM_1,&sum);CHKERRQ(ierr); 136691598edSBarry Smith ierr = VecNormEnd(a,NORM_2,&norm);CHKERRQ(ierr); 137e6ed2b1fSLois Curfman McInnes 138d2dddef7SLois Curfman McInnes 139d2dddef7SLois Curfman McInnes /* Safeguard for step sizes too small */ 140d2dddef7SLois Curfman McInnes if (sum == 0.0) {dot = 1.0; norm = 1.0;} 141aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX) 142145595abSSatish Balay else if (PetscAbsScalar(dot) < umin*sum && PetscRealPart(dot) >= 0.0) dot = umin*sum; 143145595abSSatish Balay else if (PetscAbsScalar(dot) < 0.0 && PetscRealPart(dot) > -umin*sum) dot = -umin*sum; 144d2dddef7SLois Curfman McInnes #else 145d2dddef7SLois Curfman McInnes else if (dot < umin*sum && dot >= 0.0) dot = umin*sum; 146d2dddef7SLois Curfman McInnes else if (dot < 0.0 && dot > -umin*sum) dot = -umin*sum; 147d2dddef7SLois Curfman McInnes #endif 148145595abSSatish Balay h = PetscRealPart(ctx->error_rel*dot/(norm*norm)); 149d2dddef7SLois Curfman McInnes } 150d2dddef7SLois Curfman McInnes } else { 151d2dddef7SLois Curfman McInnes h = ctx->h; 152d2dddef7SLois Curfman McInnes } 153*a83599f4SBarry Smith if (!ctx->jorge || !ctx->need_h) {ierr = PetscVerboseInfo((snes,"SNESMatrixFreeMult2_Private: h = %G\n",h));CHKERRQ(ierr);} 154d2dddef7SLois Curfman McInnes 155d2dddef7SLois Curfman McInnes /* Evaluate function at F(u + ha) */ 156db0b4b35SLois Curfman McInnes hs = h; 1572dcb1b2aSMatthew Knepley ierr = VecWAXPY(w,hs,a,U);CHKERRQ(ierr); 158d2dddef7SLois Curfman McInnes ierr = eval_fct(snes,w,y);CHKERRQ(ierr); 15979f36460SBarry Smith ierr = VecAXPY(y,-1.0,F);CHKERRQ(ierr); 16079f36460SBarry Smith ierr = VecScale(y,1.0/hs);CHKERRQ(ierr); 16174637425SBarry Smith if (ctx->sp) {ierr = MatNullSpaceRemove(ctx->sp,y,PETSC_NULL);CHKERRQ(ierr);} 162d2dddef7SLois Curfman McInnes 16346129b97SKris Buschelman ierr = PetscLogEventEnd(MATSNESMF_Mult,a,y,0,0);CHKERRQ(ierr); 16407a3eed9SLois Curfman McInnes PetscFunctionReturn(0); 165d2dddef7SLois Curfman McInnes } 166d2dddef7SLois Curfman McInnes 1674a2ae208SSatish Balay #undef __FUNCT__ 16863dd3a1aSKris Buschelman #define __FUNCT__ "SNESMatrixFreeCreate2" 169d2dddef7SLois Curfman McInnes /*@C 17063dd3a1aSKris Buschelman SNESMatrixFreeCreate2 - Creates a matrix-free matrix 171d2dddef7SLois Curfman McInnes context for use with a SNES solver. This matrix can be used as 172d2dddef7SLois Curfman McInnes the Jacobian argument for the routine SNESSetJacobian(). 173d2dddef7SLois Curfman McInnes 174d2dddef7SLois Curfman McInnes Input Parameters: 175d2dddef7SLois Curfman McInnes . snes - the SNES context 176d2dddef7SLois Curfman McInnes . x - vector where SNES solution is to be stored. 177d2dddef7SLois Curfman McInnes 178d2dddef7SLois Curfman McInnes Output Parameter: 179d2dddef7SLois Curfman McInnes . J - the matrix-free matrix 180d2dddef7SLois Curfman McInnes 18190c26489SBarry Smith Level: advanced 18290c26489SBarry Smith 183d2dddef7SLois Curfman McInnes Notes: 184d2dddef7SLois Curfman McInnes The matrix-free matrix context merely contains the function pointers 185d2dddef7SLois Curfman McInnes and work space for performing finite difference approximations of 186d2dddef7SLois Curfman McInnes Jacobian-vector products, J(u)*a, via 187d2dddef7SLois Curfman McInnes 188d2dddef7SLois Curfman McInnes $ J(u)*a = [J(u+h*a) - J(u)]/h, 189d2dddef7SLois Curfman McInnes $ where by default 190d2dddef7SLois Curfman McInnes $ h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 191d2dddef7SLois Curfman McInnes $ = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 otherwise 192d2dddef7SLois Curfman McInnes $ where 193d2dddef7SLois Curfman McInnes $ error_rel = square root of relative error in 194d2dddef7SLois Curfman McInnes $ function evaluation 195d2dddef7SLois Curfman McInnes $ umin = minimum iterate parameter 196d2dddef7SLois Curfman McInnes $ Alternatively, the differencing parameter, h, can be set using 197e6ed2b1fSLois Curfman McInnes $ Jorge's nifty new strategy if one specifies the option 198e6ed2b1fSLois Curfman McInnes $ -snes_mf_jorge 199d2dddef7SLois Curfman McInnes 2005a655dc6SBarry Smith The user can set these parameters via MatSNESMFSetFunctionError(). 201d2dddef7SLois Curfman McInnes See the nonlinear solvers chapter of the users manual for details. 202d2dddef7SLois Curfman McInnes 203d2dddef7SLois Curfman McInnes The user should call MatDestroy() when finished with the matrix-free 204d2dddef7SLois Curfman McInnes matrix context. 205d2dddef7SLois Curfman McInnes 206d2dddef7SLois Curfman McInnes Options Database Keys: 207d2dddef7SLois Curfman McInnes $ -snes_mf_err <error_rel> 208d2dddef7SLois Curfman McInnes $ -snes_mf_unim <umin> 209295f7fbbSLois Curfman McInnes $ -snes_mf_compute_err 210295f7fbbSLois Curfman McInnes $ -snes_mf_freq_err <freq> 211e6ed2b1fSLois Curfman McInnes $ -snes_mf_jorge 212d2dddef7SLois Curfman McInnes 213d2dddef7SLois Curfman McInnes .keywords: SNES, default, matrix-free, create, matrix 214d2dddef7SLois Curfman McInnes 2155a655dc6SBarry Smith .seealso: MatDestroy(), MatSNESMFSetFunctionError() 216d2dddef7SLois Curfman McInnes @*/ 21763dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT SNESDefaultMatrixFreeCreate2(SNES snes,Vec x,Mat *J) 218d2dddef7SLois Curfman McInnes { 219d2dddef7SLois Curfman McInnes MPI_Comm comm; 220d2dddef7SLois Curfman McInnes MFCtx_Private *mfctx; 2216849ba73SBarry Smith PetscErrorCode ierr; 222a7cc72afSBarry Smith PetscInt n,nloc; 223145595abSSatish Balay PetscTruth flg; 224d2dddef7SLois Curfman McInnes char p[64]; 225d2dddef7SLois Curfman McInnes 22607a3eed9SLois Curfman McInnes PetscFunctionBegin; 22782502324SSatish Balay ierr = PetscNew(MFCtx_Private,&mfctx);CHKERRQ(ierr); 22852e6d16bSBarry Smith ierr = PetscLogObjectMemory(snes,sizeof(MFCtx_Private));CHKERRQ(ierr); 229d2dddef7SLois Curfman McInnes mfctx->sp = 0; 230d2dddef7SLois Curfman McInnes mfctx->snes = snes; 23177d8c4bbSBarry Smith mfctx->error_rel = PETSC_SQRT_MACHINE_EPSILON; 232d2dddef7SLois Curfman McInnes mfctx->umin = 1.e-6; 233d2dddef7SLois Curfman McInnes mfctx->h = 0.0; 234a7cc72afSBarry Smith mfctx->need_h = PETSC_TRUE; 235a7cc72afSBarry Smith mfctx->need_err = PETSC_FALSE; 236a7cc72afSBarry Smith mfctx->compute_err = PETSC_FALSE; 237295f7fbbSLois Curfman McInnes mfctx->compute_err_freq = 0; 238295f7fbbSLois Curfman McInnes mfctx->compute_err_iter = -1; 23987828ca2SBarry Smith ierr = PetscOptionsGetReal(snes->prefix,"-snes_mf_err",&mfctx->error_rel,PETSC_NULL);CHKERRQ(ierr); 24087828ca2SBarry Smith ierr = PetscOptionsGetReal(snes->prefix,"-snes_mf_umin",&mfctx->umin,PETSC_NULL);CHKERRQ(ierr); 241a7cc72afSBarry Smith ierr = PetscOptionsHasName(snes->prefix,"-snes_mf_jorge",&mfctx->jorge);CHKERRQ(ierr); 242a7cc72afSBarry Smith ierr = PetscOptionsHasName(snes->prefix,"-snes_mf_compute_err",&mfctx->compute_err);CHKERRQ(ierr); 243b0a32e0cSBarry Smith ierr = PetscOptionsGetInt(snes->prefix,"-snes_mf_freq_err",&mfctx->compute_err_freq,&flg);CHKERRQ(ierr); 244295f7fbbSLois Curfman McInnes if (flg) { 245295f7fbbSLois Curfman McInnes if (mfctx->compute_err_freq < 0) mfctx->compute_err_freq = 0; 2463b2a6d2fSBarry Smith mfctx->compute_err = PETSC_TRUE; 247295f7fbbSLois Curfman McInnes } 2483b2a6d2fSBarry Smith if (mfctx->compute_err) mfctx->need_err = PETSC_TRUE; 249295f7fbbSLois Curfman McInnes if (mfctx->jorge || mfctx->compute_err) { 250d2dddef7SLois Curfman McInnes ierr = DiffParameterCreate_More(snes,x,&mfctx->data);CHKERRQ(ierr); 251d2dddef7SLois Curfman McInnes } else mfctx->data = 0; 252d2dddef7SLois Curfman McInnes 253b0a32e0cSBarry Smith ierr = PetscOptionsHasName(PETSC_NULL,"-help",&flg);CHKERRQ(ierr); 254549d3d68SSatish Balay ierr = PetscStrcpy(p,"-");CHKERRQ(ierr); 255d2dddef7SLois Curfman McInnes if (snes->prefix) PetscStrcat(p,snes->prefix); 256d2dddef7SLois Curfman McInnes if (flg) { 257d132466eSBarry Smith ierr = PetscPrintf(snes->comm," Matrix-free Options (via SNES):\n");CHKERRQ(ierr); 258*a83599f4SBarry Smith ierr = PetscPrintf(snes->comm," %ssnes_mf_err <err>: set sqrt of relative error in function (default %G)\n",p,mfctx->error_rel);CHKERRQ(ierr); 259*a83599f4SBarry Smith ierr = PetscPrintf(snes->comm," %ssnes_mf_umin <umin>: see users manual (default %G)\n",p,mfctx->umin);CHKERRQ(ierr); 260d132466eSBarry Smith ierr = PetscPrintf(snes->comm," %ssnes_mf_jorge: use Jorge More's method\n",p);CHKERRQ(ierr); 261d132466eSBarry Smith ierr = PetscPrintf(snes->comm," %ssnes_mf_compute_err: compute sqrt or relative error in function\n",p);CHKERRQ(ierr); 262d132466eSBarry Smith ierr = PetscPrintf(snes->comm," %ssnes_mf_freq_err <freq>: frequency to recompute this (default only once)\n",p);CHKERRQ(ierr); 263d132466eSBarry Smith ierr = PetscPrintf(snes->comm," %ssnes_mf_noise_file <file>: set file for printing noise info\n",p);CHKERRQ(ierr); 264d2dddef7SLois Curfman McInnes } 265d2dddef7SLois Curfman McInnes ierr = VecDuplicate(x,&mfctx->w);CHKERRQ(ierr); 266d2dddef7SLois Curfman McInnes ierr = PetscObjectGetComm((PetscObject)x,&comm);CHKERRQ(ierr); 267d2dddef7SLois Curfman McInnes ierr = VecGetSize(x,&n);CHKERRQ(ierr); 268d2dddef7SLois Curfman McInnes ierr = VecGetLocalSize(x,&nloc);CHKERRQ(ierr); 269f69a0ea3SMatthew Knepley ierr = MatCreate(comm,J);CHKERRQ(ierr); 270f69a0ea3SMatthew Knepley ierr = MatSetSizes(*J,nloc,n,n,n);CHKERRQ(ierr); 271f204ca49SKris Buschelman ierr = MatSetType(*J,MATSHELL);CHKERRQ(ierr); 272f204ca49SKris Buschelman ierr = MatShellSetContext(*J,mfctx);CHKERRQ(ierr); 273c134de8dSSatish Balay ierr = MatShellSetOperation(*J,MATOP_MULT,(void(*)(void))SNESMatrixFreeMult2_Private);CHKERRQ(ierr); 274c134de8dSSatish Balay ierr = MatShellSetOperation(*J,MATOP_DESTROY,(void(*)(void))SNESMatrixFreeDestroy2_Private);CHKERRQ(ierr); 275c134de8dSSatish Balay ierr = MatShellSetOperation(*J,MATOP_VIEW,(void(*)(void))SNESMatrixFreeView2_Private);CHKERRQ(ierr); 276d2dddef7SLois Curfman McInnes 27752e6d16bSBarry Smith ierr = PetscLogObjectParent(*J,mfctx->w);CHKERRQ(ierr); 27852e6d16bSBarry Smith ierr = PetscLogObjectParent(snes,*J);CHKERRQ(ierr); 27907a3eed9SLois Curfman McInnes PetscFunctionReturn(0); 280d2dddef7SLois Curfman McInnes } 281d2dddef7SLois Curfman McInnes 2824a2ae208SSatish Balay #undef __FUNCT__ 2834a2ae208SSatish Balay #define __FUNCT__ "SNESDefaultMatrixFreeSetParameters2" 28490c26489SBarry Smith /*@C 285758f395bSBarry Smith SNESDefaultMatrixFreeSetParameters2 - Sets the parameters for the approximation of 286d2dddef7SLois Curfman McInnes matrix-vector products using finite differences. 287d2dddef7SLois Curfman McInnes 288d2dddef7SLois Curfman McInnes $ J(u)*a = [J(u+h*a) - J(u)]/h where 289d2dddef7SLois Curfman McInnes 290d2dddef7SLois Curfman McInnes either the user sets h directly here, or this parameter is computed via 291d2dddef7SLois Curfman McInnes 292d2dddef7SLois Curfman McInnes $ h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 293d2dddef7SLois Curfman McInnes $ = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 else 294d2dddef7SLois Curfman McInnes $ 295d2dddef7SLois Curfman McInnes 296d2dddef7SLois Curfman McInnes Input Parameters: 297758f395bSBarry Smith + mat - the matrix 298d2dddef7SLois Curfman McInnes . error_rel - relative error (should be set to the square root of 299d2dddef7SLois Curfman McInnes the relative error in the function evaluations) 300d2dddef7SLois Curfman McInnes . umin - minimum allowable u-value 301758f395bSBarry Smith - h - differencing parameter 302d2dddef7SLois Curfman McInnes 30390c26489SBarry Smith Level: advanced 30490c26489SBarry Smith 305d2dddef7SLois Curfman McInnes Notes: 306d2dddef7SLois Curfman McInnes If the user sets the parameter h directly, then this value will be used 307d2dddef7SLois Curfman McInnes instead of the default computation indicated above. 308d2dddef7SLois Curfman McInnes 309d2dddef7SLois Curfman McInnes .keywords: SNES, matrix-free, parameters 310d2dddef7SLois Curfman McInnes 3115a655dc6SBarry Smith .seealso: MatCreateSNESMF() 312d2dddef7SLois Curfman McInnes @*/ 31363dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT SNESDefaultMatrixFreeSetParameters2(Mat mat,PetscReal error,PetscReal umin,PetscReal h) 314d2dddef7SLois Curfman McInnes { 315d2dddef7SLois Curfman McInnes MFCtx_Private *ctx; 316dfbe8321SBarry Smith PetscErrorCode ierr; 317d2dddef7SLois Curfman McInnes 31807a3eed9SLois Curfman McInnes PetscFunctionBegin; 319d2dddef7SLois Curfman McInnes ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr); 320d2dddef7SLois Curfman McInnes if (ctx) { 321d2dddef7SLois Curfman McInnes if (error != PETSC_DEFAULT) ctx->error_rel = error; 322d2dddef7SLois Curfman McInnes if (umin != PETSC_DEFAULT) ctx->umin = umin; 323d2dddef7SLois Curfman McInnes if (h != PETSC_DEFAULT) { 324d2dddef7SLois Curfman McInnes ctx->h = h; 325a7cc72afSBarry Smith ctx->need_h = PETSC_FALSE; 326d2dddef7SLois Curfman McInnes } 327d2dddef7SLois Curfman McInnes } 32807a3eed9SLois Curfman McInnes PetscFunctionReturn(0); 329d2dddef7SLois Curfman McInnes } 330d2dddef7SLois Curfman McInnes 33163dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT SNESUnSetMatrixFreeParameter(SNES snes) 332d2dddef7SLois Curfman McInnes { 333d2dddef7SLois Curfman McInnes MFCtx_Private *ctx; 334dfbe8321SBarry Smith PetscErrorCode ierr; 335d2dddef7SLois Curfman McInnes Mat mat; 336d2dddef7SLois Curfman McInnes 33707a3eed9SLois Curfman McInnes PetscFunctionBegin; 33874637425SBarry Smith ierr = SNESGetJacobian(snes,&mat,PETSC_NULL,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr); 339d2dddef7SLois Curfman McInnes ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr); 340a7cc72afSBarry Smith if (ctx) ctx->need_h = PETSC_TRUE; 34107a3eed9SLois Curfman McInnes PetscFunctionReturn(0); 342d2dddef7SLois Curfman McInnes } 343d2dddef7SLois Curfman McInnes 344