163dd3a1aSKris Buschelman #define PETSCSNES_DLL 291627157SBarry Smith 37c4f633dSBarry Smith #include "private/snesimpl.h" /*I "petscsnes.h" I*/ 491627157SBarry Smith 54a2ae208SSatish Balay #undef __FUNCT__ 64a2ae208SSatish Balay #define __FUNCT__ "SNESDefaultComputeJacobianColor" 791627157SBarry Smith /*@C 82d0c0e3bSBarry Smith SNESDefaultComputeJacobianColor - Computes the Jacobian using 9b4fc646aSLois Curfman McInnes finite differences and coloring to exploit matrix sparsity. 1091627157SBarry Smith 11fee21e36SBarry Smith Collective on SNES 12fee21e36SBarry Smith 13c7afd0dbSLois Curfman McInnes Input Parameters: 14c7afd0dbSLois Curfman McInnes + snes - nonlinear solver object 15c7afd0dbSLois Curfman McInnes . x1 - location at which to evaluate Jacobian 16c7afd0dbSLois Curfman McInnes - ctx - coloring context, where ctx must have type MatFDColoring, 17c7afd0dbSLois Curfman McInnes as created via MatFDColoringCreate() 18c7afd0dbSLois Curfman McInnes 19c7afd0dbSLois Curfman McInnes Output Parameters: 20c7afd0dbSLois Curfman McInnes + J - Jacobian matrix (not altered in this routine) 21c7afd0dbSLois Curfman McInnes . B - newly computed Jacobian matrix to use with preconditioner (generally the same as J) 22c7afd0dbSLois Curfman McInnes - flag - flag indicating whether the matrix sparsity structure has changed 23c7afd0dbSLois Curfman McInnes 2436851e7fSLois Curfman McInnes Level: intermediate 2536851e7fSLois Curfman McInnes 26b4fc646aSLois Curfman McInnes .keywords: SNES, finite differences, Jacobian, coloring, sparse 2791627157SBarry Smith 28b4fc646aSLois Curfman McInnes .seealso: SNESSetJacobian(), SNESTestJacobian(), SNESDefaultComputeJacobian() 292d0c0e3bSBarry Smith TSDefaultComputeJacobianColor(), MatFDColoringCreate(), 30cb5b572fSBarry Smith MatFDColoringSetFunction() 31cb5b572fSBarry Smith 3291627157SBarry Smith @*/ 3395d750ceSBarry Smith 347087cfbeSBarry Smith PetscErrorCode SNESDefaultComputeJacobianColor(SNES snes,Vec x1,Mat *J,Mat *B,MatStructure *flag,void *ctx) 3591627157SBarry Smith { 3691627157SBarry Smith MatFDColoring color = (MatFDColoring) ctx; 37dfbe8321SBarry Smith PetscErrorCode ierr; 383a7fca6bSBarry Smith Vec f; 394a9d489dSBarry Smith PetscErrorCode (*ff)(void),(*fd)(void); 40dff777c9SBarry Smith 413a40ed3dSBarry Smith PetscFunctionBegin; 42*a8a26c1eSJed Brown PetscValidHeaderSpecific(color,MAT_FDCOLORING_CLASSID,6); 4392abec31SBarry Smith *flag = SAME_NONZERO_PATTERN; 444a9d489dSBarry Smith ierr = SNESGetFunction(snes,&f,(PetscErrorCode (**)(SNES,Vec,Vec,void*))&ff,0);CHKERRQ(ierr); 454a9d489dSBarry Smith ierr = MatFDColoringGetFunction(color,&fd,PETSC_NULL);CHKERRQ(ierr); 464a9d489dSBarry Smith if (fd == ff) { /* reuse function value computed in SNES */ 473a7fca6bSBarry Smith ierr = MatFDColoringSetF(color,f);CHKERRQ(ierr); 484a9d489dSBarry Smith } 49005c665bSBarry Smith ierr = MatFDColoringApply(*B,color,x1,flag,snes);CHKERRQ(ierr); 5032dfb669SBarry Smith if (*J != *B) { 51194405b3SBarry Smith ierr = MatAssemblyBegin(*J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 52194405b3SBarry Smith ierr = MatAssemblyEnd(*J,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 53194405b3SBarry Smith } 543a40ed3dSBarry Smith PetscFunctionReturn(0); 5591627157SBarry Smith } 5691627157SBarry Smith 5791627157SBarry Smith 5891627157SBarry Smith 59