19a6cb015SBarry Smith 2a5eb4965SSatish Balay #ifdef PETSC_RCS_HEADER 3*15091d37SBarry Smith static char vcid[] = "$Id: snesmfj.c,v 1.79 1999/03/07 17:29:26 bsmith Exp bsmith $"; 481e6777dSBarry Smith #endif 581e6777dSBarry Smith 69a6cb015SBarry Smith #include "src/snes/snesimpl.h" 79a6cb015SBarry Smith #include "src/snes/mf/snesmfj.h" /*I "snes.h" I*/ 881e6777dSBarry Smith 99a6cb015SBarry Smith FList MatSNESFDMFList = 0; 109a6cb015SBarry Smith int MatSNESFDMFRegisterAllCalled = 0; 11a4d4d686SBarry Smith 1239e2f89bSBarry Smith 135615d1e5SSatish Balay #undef __FUNC__ 14a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFSetType" 159a6cb015SBarry Smith /*@ 169a6cb015SBarry Smith MatSNESFDMFSetType - Sets the method that is used to compute the h in the 179a6cb015SBarry Smith finite difference matrix free formulation. 189a6cb015SBarry Smith 199a6cb015SBarry Smith Input Parameters: 209a6cb015SBarry Smith + mat - the matrix free matrix created via MatCreateSNESFDMF() 219a6cb015SBarry Smith - ftype - the type requested 229a6cb015SBarry Smith 23*15091d37SBarry Smith Level: advanced 24*15091d37SBarry Smith 259a6cb015SBarry Smith .seealso: MatCreateSNESFDMF(), MatSNESFDMFRegister() 269a6cb015SBarry Smith @*/ 279a6cb015SBarry Smith int MatSNESFDMFSetType(Mat mat,char *ftype) 28b9fa9cd0SBarry Smith { 299a6cb015SBarry Smith int ierr, (*r)(MatSNESFDMFCtx); 30a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 31a4d4d686SBarry Smith 32a4d4d686SBarry Smith PetscFunctionBegin; 33a4d4d686SBarry Smith ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr); 34a4d4d686SBarry Smith 359a6cb015SBarry Smith /* already set, so just return */ 363f1db9ecSBarry Smith if (PetscTypeCompare(ctx->type_name,ftype)) PetscFunctionReturn(0); 37a4d4d686SBarry Smith 389a6cb015SBarry Smith /* destroy the old one if it exists */ 399a6cb015SBarry Smith if (ctx->ops->destroy) { 409a6cb015SBarry Smith ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr); 419a6cb015SBarry Smith } 429a6cb015SBarry Smith 439a6cb015SBarry Smith /* Get the function pointers for the iterative method requested */ 449a6cb015SBarry Smith if (!MatSNESFDMFRegisterAllCalled) {ierr = MatSNESFDMFRegisterAll(PETSC_NULL); CHKERRQ(ierr);} 459a6cb015SBarry Smith 469a6cb015SBarry Smith ierr = FListFind(ctx->comm, MatSNESFDMFList, ftype,(int (**)(void *)) &r );CHKERRQ(ierr); 479a6cb015SBarry Smith 489a6cb015SBarry Smith if (!r) SETERRQ(1,1,"Unknown MatSNESFDMF type given"); 499a6cb015SBarry Smith 509a6cb015SBarry Smith ierr = (*r)(ctx); CHKERRQ(ierr); 519a6cb015SBarry Smith ierr = PetscStrncpy(ctx->type_name,ftype,256);CHKERRQ(ierr); 529a6cb015SBarry Smith 539a6cb015SBarry Smith PetscFunctionReturn(0); 549a6cb015SBarry Smith } 559a6cb015SBarry Smith 569a6cb015SBarry Smith /*MC 579a6cb015SBarry Smith MatSNESFDMFRegister - Adds a method to the MatSNESFDMF registry 589a6cb015SBarry Smith 599a6cb015SBarry Smith Synopsis: 609a6cb015SBarry Smith MatSNESFDMFRegister(char *name_solver,char *path,char *name_create,int (*routine_create)(MatSNESFDMF)) 619a6cb015SBarry Smith 629a6cb015SBarry Smith Not Collective 639a6cb015SBarry Smith 649a6cb015SBarry Smith Input Parameters: 659a6cb015SBarry Smith + name_solver - name of a new user-defined compute-h module 669a6cb015SBarry Smith . path - path (either absolute or relative) the library containing this solver 679a6cb015SBarry Smith . name_create - name of routine to create method context 689a6cb015SBarry Smith - routine_create - routine to create method context 699a6cb015SBarry Smith 70*15091d37SBarry Smith Level: developer 71*15091d37SBarry Smith 729a6cb015SBarry Smith Notes: 739a6cb015SBarry Smith MatSNESFDMFRegister() may be called multiple times to add several user-defined solvers. 749a6cb015SBarry Smith 759a6cb015SBarry Smith If dynamic libraries are used, then the fourth input argument (routine_create) 769a6cb015SBarry Smith is ignored. 779a6cb015SBarry Smith 789a6cb015SBarry Smith Sample usage: 799a6cb015SBarry Smith .vb 809a6cb015SBarry Smith MatSNESFDMFRegister("my_h",/home/username/my_lib/lib/libO/solaris/mylib.a, 819a6cb015SBarry Smith "MyHCreate",MyHCreate); 829a6cb015SBarry Smith .ve 839a6cb015SBarry Smith 849a6cb015SBarry Smith Then, your solver can be chosen with the procedural interface via 859a6cb015SBarry Smith $ MatSNESFDMFSetType(mfctx,"my_h") 869a6cb015SBarry Smith or at runtime via the option 879a6cb015SBarry Smith $ -snes_mf_type my_h 889a6cb015SBarry Smith 899a6cb015SBarry Smith .keywords: MatSNESFDMF, register 909a6cb015SBarry Smith 919a6cb015SBarry Smith .seealso: MatSNESFDMFRegisterAll(), MatSNESFDMFRegisterDestroy() 929a6cb015SBarry Smith M*/ 939a6cb015SBarry Smith 949a6cb015SBarry Smith #undef __FUNC__ 959a6cb015SBarry Smith #define __FUNC__ "MatSNESFDMFRegister_Private" 969a6cb015SBarry Smith int MatSNESFDMFRegister_Private(char *sname,char *path,char *name,int (*function)(MatSNESFDMFCtx)) 979a6cb015SBarry Smith { 989a6cb015SBarry Smith int ierr; 999a6cb015SBarry Smith char fullname[256]; 1009a6cb015SBarry Smith 1019a6cb015SBarry Smith PetscFunctionBegin; 1029a6cb015SBarry Smith PetscStrcpy(fullname,path); PetscStrcat(fullname,":");PetscStrcat(fullname,name); 1039a6cb015SBarry Smith ierr = FListAdd_Private(&MatSNESFDMFList,sname,fullname,(int (*)(void*))function);CHKERRQ(ierr); 1049a6cb015SBarry Smith PetscFunctionReturn(0); 1059a6cb015SBarry Smith } 1069a6cb015SBarry Smith 1079a6cb015SBarry Smith 1089a6cb015SBarry Smith #undef __FUNC__ 1099a6cb015SBarry Smith #define __FUNC__ "MatSNESFDMFRegisterDestroy" 1109a6cb015SBarry Smith /*@C 1119a6cb015SBarry Smith MatSNESFDMFRegisterDestroy - Frees the list of MatSNESFDMF methods that were 1129a6cb015SBarry Smith registered by MatSNESFDMFRegister(). 1139a6cb015SBarry Smith 1149a6cb015SBarry Smith Not Collective 1159a6cb015SBarry Smith 116*15091d37SBarry Smith Level: developer 117*15091d37SBarry Smith 1189a6cb015SBarry Smith .keywords: MatSNESFDMF, register, destroy 1199a6cb015SBarry Smith 1209a6cb015SBarry Smith .seealso: MatSNESFDMFRegister(), MatSNESFDMFRegisterAll() 1219a6cb015SBarry Smith @*/ 1229a6cb015SBarry Smith int MatSNESFDMFRegisterDestroy(void) 1239a6cb015SBarry Smith { 1249a6cb015SBarry Smith int ierr; 1259a6cb015SBarry Smith 1269a6cb015SBarry Smith PetscFunctionBegin; 1279a6cb015SBarry Smith if (MatSNESFDMFList) { 1289a6cb015SBarry Smith ierr = FListDestroy( MatSNESFDMFList );CHKERRQ(ierr); 1299a6cb015SBarry Smith MatSNESFDMFList = 0; 1309a6cb015SBarry Smith } 1319a6cb015SBarry Smith MatSNESFDMFRegisterAllCalled = 0; 1329a6cb015SBarry Smith PetscFunctionReturn(0); 1339a6cb015SBarry Smith } 1349a6cb015SBarry Smith 1359a6cb015SBarry Smith /* ----------------------------------------------------------------------------------------*/ 136a4d4d686SBarry Smith #undef __FUNC__ 137a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFDestroy_Private" 138a4d4d686SBarry Smith int MatSNESFDMFDestroy_Private(Mat mat) 139a4d4d686SBarry Smith { 140a4d4d686SBarry Smith int ierr; 141a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 142fae171e0SBarry Smith 1433a40ed3dSBarry Smith PetscFunctionBegin; 1440a25c783SBarry Smith ierr = MatShellGetContext(mat,(void **)&ctx);CHKERRQ(ierr); 145b9fa9cd0SBarry Smith ierr = VecDestroy(ctx->w); CHKERRQ(ierr); 1469a6cb015SBarry Smith if (ctx->ops->destroy) {ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr);} 147b4fd4287SBarry Smith if (ctx->sp) {ierr = PCNullSpaceDestroy(ctx->sp);CHKERRQ(ierr);} 1489a6cb015SBarry Smith PetscFree(ctx->ops); 149fae171e0SBarry Smith PetscFree(ctx); 1503a40ed3dSBarry Smith PetscFunctionReturn(0); 151b9fa9cd0SBarry Smith } 15250361f65SLois Curfman McInnes 1535615d1e5SSatish Balay #undef __FUNC__ 154a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFView_Private" 15539e2f89bSBarry Smith /* 156a4d4d686SBarry Smith MatSNESFDMFView_Private - Views matrix-free parameters. 1578f6e3e37SBarry Smith 15839e2f89bSBarry Smith */ 159a4d4d686SBarry Smith int MatSNESFDMFView_Private(Mat J,Viewer viewer) 160eb9086c3SLois Curfman McInnes { 161eb9086c3SLois Curfman McInnes int ierr; 162a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 163eb9086c3SLois Curfman McInnes MPI_Comm comm; 164eb9086c3SLois Curfman McInnes FILE *fd; 165eb9086c3SLois Curfman McInnes ViewerType vtype; 166eb9086c3SLois Curfman McInnes 1673a40ed3dSBarry Smith PetscFunctionBegin; 1682d0c0e3bSBarry Smith ierr = PetscObjectGetComm((PetscObject)J,&comm);CHKERRQ(ierr); 169eb9086c3SLois Curfman McInnes ierr = MatShellGetContext(J,(void **)&ctx); CHKERRQ(ierr); 170eb9086c3SLois Curfman McInnes ierr = ViewerGetType(viewer,&vtype); CHKERRQ(ierr); 171eb9086c3SLois Curfman McInnes ierr = ViewerASCIIGetPointer(viewer,&fd); CHKERRQ(ierr); 1723f1db9ecSBarry Smith if (PetscTypeCompare(vtype,ASCII_VIEWER)) { 173eb9086c3SLois Curfman McInnes PetscFPrintf(comm,fd," SNES matrix-free approximation:\n"); 174eb9086c3SLois Curfman McInnes PetscFPrintf(comm,fd," err=%g (relative error in function evaluation)\n",ctx->error_rel); 1759a6cb015SBarry Smith PetscFPrintf(ctx->comm,fd," Using %s compute h routine\n",ctx->type_name); 1769a6cb015SBarry Smith if (ctx->ops->view) { 1779a6cb015SBarry Smith ierr = (*ctx->ops->view)(ctx,viewer);CHKERRQ(ierr); 1789a6cb015SBarry Smith } 1795cd90555SBarry Smith } else { 1805cd90555SBarry Smith SETERRQ(1,1,"Viewer type not supported for this object"); 181eb9086c3SLois Curfman McInnes } 1823a40ed3dSBarry Smith PetscFunctionReturn(0); 183eb9086c3SLois Curfman McInnes } 184eb9086c3SLois Curfman McInnes 185be726c96SBarry Smith #undef __FUNC__ 186be726c96SBarry Smith #define __FUNC__ "MatSNESFDMFAssemblyEnd_Private" 187be726c96SBarry Smith /* 188be726c96SBarry Smith MatSNESFDMFAssemblyEnd_Private - Resets the ctx->ncurrenth to zero. This 189be726c96SBarry Smith allows the user to indicate the beginning of a new linear solve by call 190be726c96SBarry Smith MatAssemblyXXX() on the matrix free matrix. This then allows the 191be726c96SBarry Smith MatSNESFDMFCreate_WP() to properly compute the || U|| only the first 192be726c96SBarry Smith time in the linear solver rather than every time 193be726c96SBarry Smith 194be726c96SBarry Smith */ 195be726c96SBarry Smith int MatSNESFDMFAssemblyEnd_Private(Mat J) 196be726c96SBarry Smith { 197be726c96SBarry Smith int ierr; 198be726c96SBarry Smith 199be726c96SBarry Smith PetscFunctionBegin; 200be726c96SBarry Smith ierr = MatSNESFDMFResetHHistory(J);CHKERRQ(ierr); 201be726c96SBarry Smith PetscFunctionReturn(0); 202be726c96SBarry Smith } 203be726c96SBarry Smith 204c481317fSBarry Smith 2055615d1e5SSatish Balay #undef __FUNC__ 206a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFMult_Private" 207eb9086c3SLois Curfman McInnes /* 208a4d4d686SBarry Smith MatSNESFDMFMult_Private - Default matrix-free form for Jacobian-vector 209eb9086c3SLois Curfman McInnes product, y = F'(u)*a: 210a4d4d686SBarry Smith 2119a6cb015SBarry Smith y ~= ( F(u + ha) - F(u) )/h, 212eb9086c3SLois Curfman McInnes where F = nonlinear function, as set by SNESSetFunction() 213eb9086c3SLois Curfman McInnes u = current iterate 214eb9086c3SLois Curfman McInnes h = difference interval 215eb9086c3SLois Curfman McInnes */ 216a4d4d686SBarry Smith int MatSNESFDMFMult_Private(Mat mat,Vec a,Vec y) 21739e2f89bSBarry Smith { 218a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 219fae171e0SBarry Smith SNES snes; 220a4d4d686SBarry Smith Scalar h, mone = -1.0; 221fae171e0SBarry Smith Vec w,U,F; 222a305c92eSSatish Balay int ierr, (*eval_fct)(SNES,Vec,Vec)=0; 22339e2f89bSBarry Smith 2243a40ed3dSBarry Smith PetscFunctionBegin; 2259a6cb015SBarry Smith /* We log matrix-free matrix-vector products separately, so that we can 2269a6cb015SBarry Smith separate the performance monitoring from the cases that use conventional 2279a6cb015SBarry Smith storage. We may eventually modify event logging to associate events 2289a6cb015SBarry Smith with particular objects, hence alleviating the more general problem. */ 22956cd22aeSBarry Smith PLogEventBegin(MAT_MatrixFreeMult,a,y,0,0); 23056cd22aeSBarry Smith 2316e38a044SBarry Smith ierr = MatShellGetContext(mat,(void **)&ctx); CHKERRQ(ierr); 232fae171e0SBarry Smith snes = ctx->snes; 233fae171e0SBarry Smith w = ctx->w; 234fae171e0SBarry Smith 23578b31e54SBarry Smith ierr = SNESGetSolution(snes,&U); CHKERRQ(ierr); 23683e56afdSLois Curfman McInnes if (snes->method_class == SNES_NONLINEAR_EQUATIONS) { 23783e56afdSLois Curfman McInnes eval_fct = SNESComputeFunction; 23878b31e54SBarry Smith ierr = SNESGetFunction(snes,&F); CHKERRQ(ierr); 239a4d4d686SBarry Smith } else if (snes->method_class == SNES_UNCONSTRAINED_MINIMIZATION) { 24083e56afdSLois Curfman McInnes eval_fct = SNESComputeGradient; 24183e56afdSLois Curfman McInnes ierr = SNESGetGradient(snes,&F); CHKERRQ(ierr); 242a4d4d686SBarry Smith } else SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,0,"Invalid method class"); 24350361f65SLois Curfman McInnes 2449a6cb015SBarry Smith if (!ctx->ops->compute) { 2459a6cb015SBarry Smith ierr = MatSNESFDMFSetType(mat,"default");CHKERRQ(ierr); 2469a6cb015SBarry Smith ierr = MatSNESFDMFSetFromOptions(mat);CHKERRQ(ierr); 2479a6cb015SBarry Smith } 2489a6cb015SBarry Smith ierr = (*ctx->ops->compute)(ctx,U,a,&h); CHKERRQ(ierr); 249a4d4d686SBarry Smith 250a4d4d686SBarry Smith /* keep a record of the current differencing parameter h */ 251a4d4d686SBarry Smith ctx->currenth = h; 252a4d4d686SBarry Smith #if defined(USE_PETSC_COMPLEX) 253a4d4d686SBarry Smith PLogInfo(mat,"Current differencing parameter: %g + %g i\n",PetscReal(h),PetscImaginary(h)); 254a4d4d686SBarry Smith #else 255a4d4d686SBarry Smith PLogInfo(mat,"Current differencing parameter: %g\n",h); 256a4d4d686SBarry Smith #endif 257a4d4d686SBarry Smith if (ctx->historyh && ctx->ncurrenth < ctx->maxcurrenth) { 258a4d4d686SBarry Smith ctx->historyh[ctx->ncurrenth++] = h; 259be726c96SBarry Smith } else { 260be726c96SBarry Smith ctx->ncurrenth++; 261a4d4d686SBarry Smith } 262a4d4d686SBarry Smith 263a4d4d686SBarry Smith /* Evaluate function at F(u + ha) */ 264a4d4d686SBarry Smith ierr = VecWAXPY(&h,a,U,w); CHKERRQ(ierr); 265a4d4d686SBarry Smith ierr = eval_fct(snes,w,y); CHKERRQ(ierr); 266a4d4d686SBarry Smith 267a4d4d686SBarry Smith ierr = VecAXPY(&mone,F,y); CHKERRQ(ierr); 268a4d4d686SBarry Smith h = 1.0/h; 269a4d4d686SBarry Smith ierr = VecScale(&h,y); CHKERRQ(ierr); 270a4d4d686SBarry Smith if (ctx->sp) {ierr = PCNullSpaceRemove(ctx->sp,y); CHKERRQ(ierr);} 271a4d4d686SBarry Smith 272a4d4d686SBarry Smith PLogEventEnd(MAT_MatrixFreeMult,a,y,0,0); 273a4d4d686SBarry Smith PetscFunctionReturn(0); 274a4d4d686SBarry Smith } 275a4d4d686SBarry Smith 276a4d4d686SBarry Smith #undef __FUNC__ 277a4d4d686SBarry Smith #define __FUNC__ "MatCreateSNESFDMF" 278a4d4d686SBarry Smith /*@C 279a4d4d686SBarry Smith MatCreateSNESFDMF - Creates a matrix-free matrix 280a4d4d686SBarry Smith context for use with a SNES solver. This matrix can be used as 281a4d4d686SBarry Smith the Jacobian argument for the routine SNESSetJacobian(). 282a4d4d686SBarry Smith 283a4d4d686SBarry Smith Collective on SNES and Vec 284a4d4d686SBarry Smith 285a4d4d686SBarry Smith Input Parameters: 286a4d4d686SBarry Smith + snes - the SNES context 287a4d4d686SBarry Smith - x - vector where SNES solution is to be stored. 288a4d4d686SBarry Smith 289a4d4d686SBarry Smith Output Parameter: 290a4d4d686SBarry Smith . J - the matrix-free matrix 291a4d4d686SBarry Smith 292*15091d37SBarry Smith Level: advanced 293*15091d37SBarry Smith 294a4d4d686SBarry Smith Notes: 295a4d4d686SBarry Smith The matrix-free matrix context merely contains the function pointers 296a4d4d686SBarry Smith and work space for performing finite difference approximations of 2979a6cb015SBarry Smith Jacobian-vector products, J(u)*a, 2989a6cb015SBarry Smith 2999a6cb015SBarry Smith The default code uses the following approach to compute h 300a4d4d686SBarry Smith 301a4d4d686SBarry Smith .vb 302a4d4d686SBarry Smith J(u)*a = [J(u+h*a) - J(u)]/h where 303a4d4d686SBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 304a4d4d686SBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 otherwise 305a4d4d686SBarry Smith where 306a4d4d686SBarry Smith error_rel = square root of relative error in function evaluation 307a4d4d686SBarry Smith umin = minimum iterate parameter 308a4d4d686SBarry Smith .ve 309a4d4d686SBarry Smith 3109a6cb015SBarry Smith The user can set the error_rel via MatSNESFDMFSetFunctionError() and 3119a6cb015SBarry Smith umin via MatSNESFDMFDefaultSetUmin() 312a4d4d686SBarry Smith See the nonlinear solvers chapter of the users manual for details. 313a4d4d686SBarry Smith 314a4d4d686SBarry Smith The user should call MatDestroy() when finished with the matrix-free 315a4d4d686SBarry Smith matrix context. 316a4d4d686SBarry Smith 317a4d4d686SBarry Smith Options Database Keys: 318a4d4d686SBarry Smith + -snes_mf_err <error_rel> - Sets error_rel 3199a6cb015SBarry Smith . -snes_mf_unim <umin> - Sets umin (for default PETSc routine that computes h only) 320a4d4d686SBarry Smith - -snes_mf_ksp_monitor - KSP monitor routine that prints differencing h 321a4d4d686SBarry Smith 322a4d4d686SBarry Smith .keywords: SNES, default, matrix-free, create, matrix 323a4d4d686SBarry Smith 3249a6cb015SBarry Smith .seealso: MatDestroy(), MatSNESFDMFSetFunctionError(), MatSNESFDMFDefaultSetUmin() 325a4d4d686SBarry Smith MatSNESFDMFSetHHistory(), MatSNESFDMFResetHHistory(), 3269a6cb015SBarry Smith MatSNESFDMFGetH(),MatSNESFDMFKSPMonitor(), MatSNESFDMFRegister() 327a4d4d686SBarry Smith 328a4d4d686SBarry Smith @*/ 329a4d4d686SBarry Smith int MatCreateSNESFDMF(SNES snes,Vec x, Mat *J) 330a4d4d686SBarry Smith { 331a4d4d686SBarry Smith MPI_Comm comm; 332a4d4d686SBarry Smith MatSNESFDMFCtx mfctx; 3339a6cb015SBarry Smith int n, nloc, ierr; 334a4d4d686SBarry Smith 335a4d4d686SBarry Smith PetscFunctionBegin; 336a4d4d686SBarry Smith mfctx = (MatSNESFDMFCtx) PetscMalloc(sizeof(struct _p_MatSNESFDMFCtx)); CHKPTRQ(mfctx); 337a4d4d686SBarry Smith PLogObjectMemory(snes,sizeof(MatSNESFDMFCtx)); 3389a6cb015SBarry Smith mfctx->comm = snes->comm; 339a4d4d686SBarry Smith mfctx->sp = 0; 340a4d4d686SBarry Smith mfctx->snes = snes; 341a4d4d686SBarry Smith mfctx->error_rel = 1.e-8; /* assumes double precision */ 342a4d4d686SBarry Smith mfctx->currenth = 0.0; 343a4d4d686SBarry Smith mfctx->historyh = PETSC_NULL; 344a4d4d686SBarry Smith mfctx->ncurrenth = 0; 345a4d4d686SBarry Smith mfctx->maxcurrenth = 0; 346a4d4d686SBarry Smith 3479a6cb015SBarry Smith /* 3489a6cb015SBarry Smith Create the empty data structure to contain compute-h routines. 3499a6cb015SBarry Smith These will be filled in below from the command line options or 3509a6cb015SBarry Smith a later call with MatSNESFDMFSetType() or if that is not called 3519a6cb015SBarry Smith then it will default in the first use of MatSNESFDMFMult_private() 3529a6cb015SBarry Smith */ 3539a6cb015SBarry Smith mfctx->ops = (MFOps *)PetscMalloc(sizeof(MFOps)); CHKPTRQ(mfctx->ops); 3549a6cb015SBarry Smith mfctx->ops->compute = 0; 3559a6cb015SBarry Smith mfctx->ops->destroy = 0; 3569a6cb015SBarry Smith mfctx->ops->view = 0; 3579a6cb015SBarry Smith mfctx->ops->printhelp = 0; 3589a6cb015SBarry Smith mfctx->ops->setfromoptions = 0; 3599a6cb015SBarry Smith mfctx->hctx = 0; 3609a6cb015SBarry Smith 361a4d4d686SBarry Smith ierr = VecDuplicate(x,&mfctx->w); CHKERRQ(ierr); 362a4d4d686SBarry Smith ierr = PetscObjectGetComm((PetscObject)x,&comm); CHKERRQ(ierr); 363a4d4d686SBarry Smith ierr = VecGetSize(x,&n); CHKERRQ(ierr); 364a4d4d686SBarry Smith ierr = VecGetLocalSize(x,&nloc); CHKERRQ(ierr); 365ffa0fd9eSBarry Smith ierr = MatCreateShell(comm,nloc,nloc,n,n,mfctx,J); CHKERRQ(ierr); 366a4d4d686SBarry Smith ierr = MatShellSetOperation(*J,MATOP_MULT,(void*)MatSNESFDMFMult_Private);CHKERRQ(ierr); 367a4d4d686SBarry Smith ierr = MatShellSetOperation(*J,MATOP_DESTROY,(void *)MatSNESFDMFDestroy_Private);CHKERRQ(ierr); 368a4d4d686SBarry Smith ierr = MatShellSetOperation(*J,MATOP_VIEW,(void *)MatSNESFDMFView_Private); CHKERRQ(ierr); 369be726c96SBarry Smith ierr = MatShellSetOperation(*J,MATOP_ASSEMBLY_END,(void *)MatSNESFDMFAssemblyEnd_Private);CHKERRQ(ierr); 370a4d4d686SBarry Smith PLogObjectParent(*J,mfctx->w); 371a4d4d686SBarry Smith PLogObjectParent(snes,*J); 3729a6cb015SBarry Smith 3739a6cb015SBarry Smith mfctx->mat = *J; 3749a6cb015SBarry Smith 3759a6cb015SBarry Smith 3769a6cb015SBarry Smith PetscFunctionReturn(0); 3779a6cb015SBarry Smith } 3789a6cb015SBarry Smith 3799a6cb015SBarry Smith #undef __FUNC__ 3809a6cb015SBarry Smith #define __FUNC__ "MatSNESFDMFGetH" 3819a6cb015SBarry Smith /*@ 3829a6cb015SBarry Smith MatSNESFDMFSetFromOptions - Sets the MatSNESFDMF options from the command line 3839a6cb015SBarry Smith parameter. 3849a6cb015SBarry Smith 3859a6cb015SBarry Smith Collective on Mat 3869a6cb015SBarry Smith 3879a6cb015SBarry Smith Input Parameters: 3889a6cb015SBarry Smith . mat - the matrix obtained with MatCreateSNESFDMF() 3899a6cb015SBarry Smith 390*15091d37SBarry Smith Level: advanced 391*15091d37SBarry Smith 3929a6cb015SBarry Smith .keywords: SNES, matrix-free, parameters 3939a6cb015SBarry Smith 3949a6cb015SBarry Smith .seealso: MatCreateSNESFDMF(),MatSNESFDMFSetHHistory(), 3959a6cb015SBarry Smith MatSNESFDMFResetHHistory(),MatSNESFDMFKSPMonitor() 3969a6cb015SBarry Smith @*/ 3979a6cb015SBarry Smith int MatSNESFDMFSetFromOptions(Mat mat) 3989a6cb015SBarry Smith { 3999a6cb015SBarry Smith MatSNESFDMFCtx mfctx; 4009a6cb015SBarry Smith int ierr,flg; 4019a6cb015SBarry Smith char ftype[256],p[64]; 4029a6cb015SBarry Smith 4039a6cb015SBarry Smith PetscFunctionBegin; 4049a6cb015SBarry Smith ierr = MatShellGetContext(mat,(void **)&mfctx); CHKERRQ(ierr); 4059a6cb015SBarry Smith if (mfctx) { 4069a6cb015SBarry Smith /* allow user to set the type */ 4079a6cb015SBarry Smith ierr = OptionsGetString(mfctx->snes->prefix,"-snes_mf_type",ftype,256,&flg);CHKERRQ(ierr); 4089a6cb015SBarry Smith if (flg) { 4099a6cb015SBarry Smith ierr = MatSNESFDMFSetType(mat,ftype);CHKERRQ(ierr); 4109a6cb015SBarry Smith } 4119a6cb015SBarry Smith 4129a6cb015SBarry Smith ierr = OptionsGetDouble(mfctx->snes->prefix,"-snes_mf_err",&mfctx->error_rel,&flg);CHKERRQ(ierr); 4139a6cb015SBarry Smith if (mfctx->ops->setfromoptions) { 4149a6cb015SBarry Smith ierr = (*mfctx->ops->setfromoptions)(mfctx);CHKERRQ(ierr); 4159a6cb015SBarry Smith } 4169a6cb015SBarry Smith 4179a6cb015SBarry Smith ierr = OptionsHasName(PETSC_NULL,"-help",&flg); CHKERRQ(ierr); 4189a6cb015SBarry Smith PetscStrcpy(p,"-"); 4199a6cb015SBarry Smith if (mfctx->snes->prefix) PetscStrcat(p,mfctx->snes->prefix); 4209a6cb015SBarry Smith if (flg) { 4219a6cb015SBarry Smith (*PetscHelpPrintf)(mfctx->snes->comm," %ssnes_mf_err <err>: set sqrt rel error in function (default %g)\n",p,mfctx->error_rel); 4229a6cb015SBarry Smith if (mfctx->ops->printhelp) { 4239a6cb015SBarry Smith (*mfctx->ops->printhelp)(mfctx);CHKERRQ(ierr); 4249a6cb015SBarry Smith } 4259a6cb015SBarry Smith } 4269a6cb015SBarry Smith } 427a4d4d686SBarry Smith PetscFunctionReturn(0); 428a4d4d686SBarry Smith } 429a4d4d686SBarry Smith 430a4d4d686SBarry Smith #undef __FUNC__ 431a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFGetH" 432a4d4d686SBarry Smith /*@ 433a4d4d686SBarry Smith MatSNESFDMFGetH - Gets the last h that was used as the differencing 434a4d4d686SBarry Smith parameter. 435a4d4d686SBarry Smith 436a4d4d686SBarry Smith Not Collective 437a4d4d686SBarry Smith 438a4d4d686SBarry Smith Input Parameters: 439a4d4d686SBarry Smith . mat - the matrix obtained with MatCreateSNESFDMF() 440a4d4d686SBarry Smith 441a4d4d686SBarry Smith Output Paramter: 442a4d4d686SBarry Smith . h - the differencing step size 443a4d4d686SBarry Smith 444*15091d37SBarry Smith Level: advanced 445*15091d37SBarry Smith 446a4d4d686SBarry Smith .keywords: SNES, matrix-free, parameters 447a4d4d686SBarry Smith 448a4d4d686SBarry Smith .seealso: MatCreateSNESFDMF(),MatSNESFDMFSetHHistory(), 449a4d4d686SBarry Smith MatSNESFDMFResetHHistory(),MatSNESFDMFKSPMonitor() 450a4d4d686SBarry Smith @*/ 451a4d4d686SBarry Smith int MatSNESFDMFGetH(Mat mat,Scalar *h) 452a4d4d686SBarry Smith { 453a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 454a4d4d686SBarry Smith int ierr; 455a4d4d686SBarry Smith 456a4d4d686SBarry Smith PetscFunctionBegin; 457a4d4d686SBarry Smith ierr = MatShellGetContext(mat,(void **)&ctx); CHKERRQ(ierr); 458a4d4d686SBarry Smith if (ctx) { 459a4d4d686SBarry Smith *h = ctx->currenth; 460a4d4d686SBarry Smith } 461a4d4d686SBarry Smith PetscFunctionReturn(0); 462a4d4d686SBarry Smith } 463a4d4d686SBarry Smith 464a4d4d686SBarry Smith #undef __FUNC__ 465a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFKSPMonitor" 466a4d4d686SBarry Smith /* 467a4d4d686SBarry Smith MatSNESFDMFKSPMonitor - A KSP monitor for use with the default PETSc 468a4d4d686SBarry Smith SNES matrix free routines. Prints the h differencing parameter used at each 469a4d4d686SBarry Smith timestep. 470a4d4d686SBarry Smith 471a4d4d686SBarry Smith */ 472a4d4d686SBarry Smith int MatSNESFDMFKSPMonitor(KSP ksp,int n,double rnorm,void *dummy) 473a4d4d686SBarry Smith { 474a4d4d686SBarry Smith PC pc; 475a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 476a4d4d686SBarry Smith int ierr; 477a4d4d686SBarry Smith Mat mat; 478a4d4d686SBarry Smith MPI_Comm comm; 479a4d4d686SBarry Smith PetscTruth nonzeroinitialguess; 480a4d4d686SBarry Smith 481a4d4d686SBarry Smith PetscFunctionBegin; 482a4d4d686SBarry Smith ierr = PetscObjectGetComm((PetscObject)ksp,&comm);CHKERRQ(ierr); 483a4d4d686SBarry Smith ierr = KSPGetPC(ksp,&pc); CHKERRQ(ierr); 484a4d4d686SBarry Smith ierr = KSPGetInitialGuessNonzero(ksp,&nonzeroinitialguess);CHKERRQ(ierr); 485a4d4d686SBarry Smith ierr = PCGetOperators(pc,&mat,PETSC_NULL,PETSC_NULL); CHKERRQ(ierr); 486a4d4d686SBarry Smith ierr = MatShellGetContext(mat,(void **)&ctx); CHKERRQ(ierr); 4879a6cb015SBarry Smith if (!ctx) { 4889a6cb015SBarry Smith SETERRQ(1,1,"Matrix is not a matrix free shell matrix"); 4899a6cb015SBarry Smith } 490a4d4d686SBarry Smith if (n > 0 || nonzeroinitialguess) { 491a4d4d686SBarry Smith #if defined(USE_PETSC_COMPLEX) 492a4d4d686SBarry Smith PetscPrintf(comm,"%d KSP Residual norm %14.12e h %g + %g i\n",n,rnorm, 493a4d4d686SBarry Smith PetscReal(ctx->currenth),PetscImaginary(ctx->currenth)); 494a4d4d686SBarry Smith #else 495a4d4d686SBarry Smith PetscPrintf(comm,"%d KSP Residual norm %14.12e h %g \n",n,rnorm,ctx->currenth); 496a4d4d686SBarry Smith #endif 497a4d4d686SBarry Smith } else { 498a4d4d686SBarry Smith PetscPrintf(comm,"%d KSP Residual norm %14.12e\n",n,rnorm); 499a4d4d686SBarry Smith } 500a4d4d686SBarry Smith PetscFunctionReturn(0); 501a4d4d686SBarry Smith } 502a4d4d686SBarry Smith 503a4d4d686SBarry Smith #undef __FUNC__ 5049a6cb015SBarry Smith #define __FUNC__ "MatSNESFDMFSetFunctionError" 505a4d4d686SBarry Smith /*@ 5069a6cb015SBarry Smith MatSNESFDMFSetFunctionError - Sets the error_rel for the approximation of 507a4d4d686SBarry Smith matrix-vector products using finite differences. 508a4d4d686SBarry Smith 509a4d4d686SBarry Smith Collective on Mat 510a4d4d686SBarry Smith 511a4d4d686SBarry Smith Input Parameters: 512a4d4d686SBarry Smith + mat - the matrix free matrix created via MatCreateSNESFDMF() 5139a6cb015SBarry Smith - error_rel - relative error (should be set to the square root of 514a4d4d686SBarry Smith the relative error in the function evaluations) 515a4d4d686SBarry Smith 516*15091d37SBarry Smith Options Database Keys: 517*15091d37SBarry Smith + -snes_mf_err <error_rel> - Sets error_rel 518*15091d37SBarry Smith 519*15091d37SBarry Smith Level: advanced 520*15091d37SBarry Smith 521a4d4d686SBarry Smith Notes: 522a4d4d686SBarry Smith The default matrix-free matrix-vector product routine computes 523a4d4d686SBarry Smith .vb 524a4d4d686SBarry Smith J(u)*a = [J(u+h*a) - J(u)]/h where 525a4d4d686SBarry Smith h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 526a4d4d686SBarry Smith = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 else 527a4d4d686SBarry Smith .ve 528a4d4d686SBarry Smith 529a4d4d686SBarry Smith 530a4d4d686SBarry Smith .keywords: SNES, matrix-free, parameters 531a4d4d686SBarry Smith 532a4d4d686SBarry Smith .seealso: MatCreateSNESFDMF(),MatSNESFDMFGetH(), 533a4d4d686SBarry Smith MatSNESFDMFSetHHistory(), MatSNESFDMFResetHHistory(), 534a4d4d686SBarry Smith MatSNESFDMFKSPMonitor() 535a4d4d686SBarry Smith @*/ 5369a6cb015SBarry Smith int MatSNESFDMFSetFunctionError(Mat mat,double error) 537a4d4d686SBarry Smith { 538a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 539a4d4d686SBarry Smith int ierr; 540a4d4d686SBarry Smith 541a4d4d686SBarry Smith PetscFunctionBegin; 542a4d4d686SBarry Smith ierr = MatShellGetContext(mat,(void **)&ctx); CHKERRQ(ierr); 543a4d4d686SBarry Smith if (ctx) { 544a4d4d686SBarry Smith if (error != PETSC_DEFAULT) ctx->error_rel = error; 545a4d4d686SBarry Smith } 546a4d4d686SBarry Smith PetscFunctionReturn(0); 547a4d4d686SBarry Smith } 548a4d4d686SBarry Smith 549a4d4d686SBarry Smith #undef __FUNC__ 550a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFAddNullSpace" 551a4d4d686SBarry Smith /*@ 552a4d4d686SBarry Smith MatSNESFDMFAddNullSpace - Provides a null space that 553a4d4d686SBarry Smith an operator is supposed to have. Since roundoff will create a 554a4d4d686SBarry Smith small component in the null space, if you know the null space 555a4d4d686SBarry Smith you may have it automatically removed. 556a4d4d686SBarry Smith 557a4d4d686SBarry Smith Collective on Mat 558a4d4d686SBarry Smith 559a4d4d686SBarry Smith Input Parameters: 560a4d4d686SBarry Smith + J - the matrix-free matrix context 561a4d4d686SBarry Smith . has_cnst - PETSC_TRUE or PETSC_FALSE, indicating if null space has constants 562a4d4d686SBarry Smith . n - number of vectors (excluding constant vector) in null space 563a4d4d686SBarry Smith - vecs - the vectors that span the null space (excluding the constant vector); 564a4d4d686SBarry Smith these vectors must be orthonormal 565a4d4d686SBarry Smith 566*15091d37SBarry Smith Level: advanced 567*15091d37SBarry Smith 568a4d4d686SBarry Smith .keywords: SNES, matrix-free, null space 569a4d4d686SBarry Smith 570a4d4d686SBarry Smith .seealso: MatSNESFDMFGetH(), MatCreateSNESFDMF(), 571a4d4d686SBarry Smith MatSNESFDMFSetHHistory(), MatSNESFDMFResetHHistory(), 5729a6cb015SBarry Smith MatSNESFDMFKSPMonitor(), MatSNESFDMFErrorRel() 573a4d4d686SBarry Smith 574a4d4d686SBarry Smith @*/ 575a4d4d686SBarry Smith int MatSNESFDMFAddNullSpace(Mat J,int has_cnst,int n,Vec *vecs) 576a4d4d686SBarry Smith { 577a4d4d686SBarry Smith int ierr; 578a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 579a4d4d686SBarry Smith MPI_Comm comm; 580a4d4d686SBarry Smith 581a4d4d686SBarry Smith PetscFunctionBegin; 5822d0c0e3bSBarry Smith ierr = PetscObjectGetComm((PetscObject)J,&comm);CHKERRQ(ierr); 583a4d4d686SBarry Smith 584a4d4d686SBarry Smith ierr = MatShellGetContext(J,(void **)&ctx); CHKERRQ(ierr); 585a4d4d686SBarry Smith /* no context indicates that it is not the "matrix free" matrix type */ 586a4d4d686SBarry Smith if (!ctx) PetscFunctionReturn(0); 587a4d4d686SBarry Smith ierr = PCNullSpaceCreate(comm,has_cnst,n,vecs,&ctx->sp); CHKERRQ(ierr); 588a4d4d686SBarry Smith PetscFunctionReturn(0); 589a4d4d686SBarry Smith } 590a4d4d686SBarry Smith 591a4d4d686SBarry Smith #undef __FUNC__ 592a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFSetHHistory" 593a4d4d686SBarry Smith /*@ 594a4d4d686SBarry Smith MatSNESFDMFSetHHistory - Sets an array to collect a history 595a4d4d686SBarry Smith of the differencing values h computed for the matrix free product 596a4d4d686SBarry Smith 597a4d4d686SBarry Smith Collective on Mat 598a4d4d686SBarry Smith 599a4d4d686SBarry Smith Input Parameters: 600a4d4d686SBarry Smith + J - the matrix-free matrix context 601a4d4d686SBarry Smith . histroy - space to hold the h history 602a4d4d686SBarry Smith - nhistory - number of entries in history, if more h are generated than 603a4d4d686SBarry Smith nhistory the later ones are discarded 604a4d4d686SBarry Smith 605*15091d37SBarry Smith Level: advanced 606*15091d37SBarry Smith 607a4d4d686SBarry Smith Notes: 608a4d4d686SBarry Smith Use MatSNESFDMFResetHHistory() to reset the history counter 609a4d4d686SBarry Smith and collect a new batch of h. 610a4d4d686SBarry Smith 611a4d4d686SBarry Smith .keywords: SNES, matrix-free, h history, differencing history 612a4d4d686SBarry Smith 613a4d4d686SBarry Smith .seealso: MatSNESFDMFGetH(), MatCreateSNESFDMF(), 614a4d4d686SBarry Smith MatSNESFDMFResetHHistory(), 6159a6cb015SBarry Smith MatSNESFDMFKSPMonitor(), MatSNESFDMFSetFunctionError() 616a4d4d686SBarry Smith 617a4d4d686SBarry Smith @*/ 618a4d4d686SBarry Smith int MatSNESFDMFSetHHistory(Mat J,Scalar *history,int nhistory) 619a4d4d686SBarry Smith { 620a4d4d686SBarry Smith int ierr; 621a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 622a4d4d686SBarry Smith 623a4d4d686SBarry Smith PetscFunctionBegin; 624a4d4d686SBarry Smith 625a4d4d686SBarry Smith ierr = MatShellGetContext(J,(void **)&ctx); CHKERRQ(ierr); 626a4d4d686SBarry Smith /* no context indicates that it is not the "matrix free" matrix type */ 627a4d4d686SBarry Smith if (!ctx) PetscFunctionReturn(0); 628a4d4d686SBarry Smith ctx->historyh = history; 629a4d4d686SBarry Smith ctx->maxcurrenth = nhistory; 630a4d4d686SBarry Smith ctx->currenth = 0; 631a4d4d686SBarry Smith 632a4d4d686SBarry Smith PetscFunctionReturn(0); 633a4d4d686SBarry Smith } 634a4d4d686SBarry Smith 635a4d4d686SBarry Smith #undef __FUNC__ 636a4d4d686SBarry Smith #define __FUNC__ "MatSNESFDMFResetHHistory" 637a4d4d686SBarry Smith /*@ 638a4d4d686SBarry Smith MatSNESFDMFResetHHistory - Resets the counter to zero to begin 639a4d4d686SBarry Smith collecting a new set of differencing histories. 640a4d4d686SBarry Smith 641a4d4d686SBarry Smith Collective on Mat 642a4d4d686SBarry Smith 643a4d4d686SBarry Smith Input Parameters: 644a4d4d686SBarry Smith . J - the matrix-free matrix context 645a4d4d686SBarry Smith 646*15091d37SBarry Smith Level: advanced 647*15091d37SBarry Smith 648a4d4d686SBarry Smith Notes: 649a4d4d686SBarry Smith Use MatSNESFDMFSetHHistory() to create the original history counter 650a4d4d686SBarry Smith 651a4d4d686SBarry Smith .keywords: SNES, matrix-free, h history, differencing history 652a4d4d686SBarry Smith 653a4d4d686SBarry Smith .seealso: MatSNESFDMFGetH(), MatCreateSNESFDMF(), 654a4d4d686SBarry Smith MatSNESFDMFSetHHistory(), 6559a6cb015SBarry Smith MatSNESFDMFKSPMonitor(), MatSNESFDMFSetFunctionError() 656a4d4d686SBarry Smith 657a4d4d686SBarry Smith @*/ 658a4d4d686SBarry Smith int MatSNESFDMFResetHHistory(Mat J) 659a4d4d686SBarry Smith { 660a4d4d686SBarry Smith int ierr; 661a4d4d686SBarry Smith MatSNESFDMFCtx ctx; 662a4d4d686SBarry Smith 663a4d4d686SBarry Smith PetscFunctionBegin; 664a4d4d686SBarry Smith 665a4d4d686SBarry Smith ierr = MatShellGetContext(J,(void **)&ctx); CHKERRQ(ierr); 666a4d4d686SBarry Smith /* no context indicates that it is not the "matrix free" matrix type */ 667a4d4d686SBarry Smith if (!ctx) PetscFunctionReturn(0); 668be726c96SBarry Smith ctx->ncurrenth = 0; 669a4d4d686SBarry Smith 670a4d4d686SBarry Smith PetscFunctionReturn(0); 671a4d4d686SBarry Smith } 672a4d4d686SBarry Smith 673