181e6777dSBarry Smith 281e6777dSBarry Smith #ifndef lint 3*639f9d9dSBarry Smith static char vcid[] = "$Id: snesmfj.c,v 1.37 1996/09/28 23:11:46 curfman Exp bsmith $"; 481e6777dSBarry Smith #endif 581e6777dSBarry Smith 6b1f0a012SBarry Smith #include "draw.h" /*I "draw.h" I*/ 770f55243SBarry Smith #include "src/snes/snesimpl.h" /*I "snes.h" I*/ 8eb9086c3SLois Curfman McInnes #include "pinclude/pviewer.h" 981e6777dSBarry Smith 1050361f65SLois Curfman McInnes typedef struct { /* default context for matrix-free SNES */ 11eb9086c3SLois Curfman McInnes SNES snes; /* SNES context */ 12eb9086c3SLois Curfman McInnes Vec w; /* work vector */ 13eb9086c3SLois Curfman McInnes PCNullSpace sp; /* null space context */ 14eb9086c3SLois Curfman McInnes double error_rel; /* square root of relative error in computing function */ 15*639f9d9dSBarry Smith double umin; /* minimum allowable u'a value relative to |u|_1 */ 1639e2f89bSBarry Smith } MFCtx_Private; 1739e2f89bSBarry Smith 18fae171e0SBarry Smith int SNESMatrixFreeDestroy_Private(PetscObject obj) 19b9fa9cd0SBarry Smith { 20b9fa9cd0SBarry Smith int ierr; 21fae171e0SBarry Smith Mat mat = (Mat) obj; 22fae171e0SBarry Smith MFCtx_Private *ctx; 23fae171e0SBarry Smith 24fae171e0SBarry Smith ierr = MatShellGetContext(mat,(void **)&ctx); 25b9fa9cd0SBarry Smith ierr = VecDestroy(ctx->w); CHKERRQ(ierr); 26b4fd4287SBarry Smith if (ctx->sp) {ierr = PCNullSpaceDestroy(ctx->sp); CHKERRQ(ierr);} 27fae171e0SBarry Smith PetscFree(ctx); 28b9fa9cd0SBarry Smith return 0; 29b9fa9cd0SBarry Smith } 3050361f65SLois Curfman McInnes 3139e2f89bSBarry Smith /* 321d1bbde2SLois Curfman McInnes SNESMatrixFreeView_Private - Views matrix-free parameters. 3339e2f89bSBarry Smith */ 34eb9086c3SLois Curfman McInnes int SNESMatrixFreeView_Private(Mat J,Viewer viewer) 35eb9086c3SLois Curfman McInnes { 36eb9086c3SLois Curfman McInnes int ierr; 37eb9086c3SLois Curfman McInnes MFCtx_Private *ctx; 38eb9086c3SLois Curfman McInnes MPI_Comm comm; 39eb9086c3SLois Curfman McInnes FILE *fd; 40eb9086c3SLois Curfman McInnes ViewerType vtype; 41eb9086c3SLois Curfman McInnes 42eb9086c3SLois Curfman McInnes PetscObjectGetComm((PetscObject)J,&comm); 43eb9086c3SLois Curfman McInnes ierr = MatShellGetContext(J,(void **)&ctx); CHKERRQ(ierr); 44eb9086c3SLois Curfman McInnes ierr = ViewerGetType(viewer,&vtype); CHKERRQ(ierr); 45eb9086c3SLois Curfman McInnes ierr = ViewerASCIIGetPointer(viewer,&fd); CHKERRQ(ierr); 46eb9086c3SLois Curfman McInnes if (vtype == ASCII_FILE_VIEWER || vtype == ASCII_FILES_VIEWER) { 47eb9086c3SLois Curfman McInnes PetscFPrintf(comm,fd," SNES matrix-free approximation:\n"); 48eb9086c3SLois Curfman McInnes PetscFPrintf(comm,fd," err=%g (relative error in function evaluation)\n",ctx->error_rel); 49eb9086c3SLois Curfman McInnes PetscFPrintf(comm,fd," umin=%g (minimum iterate parameter)\n",ctx->umin); 50eb9086c3SLois Curfman McInnes } 51eb9086c3SLois Curfman McInnes return 0; 52eb9086c3SLois Curfman McInnes } 53eb9086c3SLois Curfman McInnes 54eb9086c3SLois Curfman McInnes /* 55eb9086c3SLois Curfman McInnes SNESMatrixFreeMult_Private - Default matrix-free form for Jacobian-vector 56eb9086c3SLois Curfman McInnes product, y = F'(u)*a: 57eb9086c3SLois Curfman McInnes y = ( F(u + ha) - F(u) ) /h, 58eb9086c3SLois Curfman McInnes where F = nonlinear function, as set by SNESSetFunction() 59eb9086c3SLois Curfman McInnes u = current iterate 60eb9086c3SLois Curfman McInnes h = difference interval 61eb9086c3SLois Curfman McInnes */ 62eb9086c3SLois Curfman McInnes int SNESMatrixFreeMult_Private(Mat mat,Vec a,Vec y) 6339e2f89bSBarry Smith { 64fae171e0SBarry Smith MFCtx_Private *ctx; 65fae171e0SBarry Smith SNES snes; 66eb9086c3SLois Curfman McInnes double norm, sum, umin; 675334005bSBarry Smith Scalar h, dot, mone = -1.0; 68fae171e0SBarry Smith Vec w,U,F; 6983e56afdSLois Curfman McInnes int ierr, (*eval_fct)(SNES,Vec,Vec); 7039e2f89bSBarry Smith 71fae171e0SBarry Smith MatShellGetContext(mat,(void **)&ctx); 72fae171e0SBarry Smith snes = ctx->snes; 73fae171e0SBarry Smith w = ctx->w; 74eb9086c3SLois Curfman McInnes umin = ctx->umin; 75fae171e0SBarry Smith 7657c37382SLois Curfman McInnes /* We log matrix-free matrix-vector products separately, so that we can 7757c37382SLois Curfman McInnes separate the performance monitoring from the cases that use conventional 7857c37382SLois Curfman McInnes storage. We may eventually modify event logging to associate events 7957c37382SLois Curfman McInnes with particular objects, hence alleviating the more general problem. */ 80eb9086c3SLois Curfman McInnes PLogEventBegin(MAT_MatrixFreeMult,a,y,0,0); 8157c37382SLois Curfman McInnes 8278b31e54SBarry Smith ierr = SNESGetSolution(snes,&U); CHKERRQ(ierr); 8383e56afdSLois Curfman McInnes if (snes->method_class == SNES_NONLINEAR_EQUATIONS) { 8483e56afdSLois Curfman McInnes eval_fct = SNESComputeFunction; 8578b31e54SBarry Smith ierr = SNESGetFunction(snes,&F); CHKERRQ(ierr); 8683e56afdSLois Curfman McInnes } 8783e56afdSLois Curfman McInnes else if (snes->method_class == SNES_UNCONSTRAINED_MINIMIZATION) { 8883e56afdSLois Curfman McInnes eval_fct = SNESComputeGradient; 8983e56afdSLois Curfman McInnes ierr = SNESGetGradient(snes,&F); CHKERRQ(ierr); 9083e56afdSLois Curfman McInnes } 9183e56afdSLois Curfman McInnes else SETERRQ(1,"SNESMatrixFreeMult_Private: Invalid method class"); 9250361f65SLois Curfman McInnes 93eb9086c3SLois Curfman McInnes /* Determine a "good" step size, h */ 94eb9086c3SLois Curfman McInnes ierr = VecDot(U,a,&dot); CHKERRQ(ierr); 95eb9086c3SLois Curfman McInnes ierr = VecNorm(a,NORM_1,&sum); CHKERRQ(ierr); 96eb9086c3SLois Curfman McInnes ierr = VecNorm(a,NORM_2,&norm); CHKERRQ(ierr); 97eb9086c3SLois Curfman McInnes 98eb9086c3SLois Curfman McInnes /* Safeguard for step sizes too small */ 99edd2f0e1SBarry Smith if (sum == 0.0) {dot = 1.0; norm = 1.0;} 10019a167f6SBarry Smith #if defined(PETSC_COMPLEX) 101eb9086c3SLois Curfman McInnes else if (abs(dot) < umin*sum && real(dot) >= 0.0) dot = umin*sum; 102eb9086c3SLois Curfman McInnes else if (abs(dot) < 0.0 && real(dot) > -umin*sum) dot = -umin*sum; 10319a167f6SBarry Smith #else 104eb9086c3SLois Curfman McInnes else if (dot < umin*sum && dot >= 0.0) dot = umin*sum; 105eb9086c3SLois Curfman McInnes else if (dot < 0.0 && dot > -umin*sum) dot = -umin*sum; 10619a167f6SBarry Smith #endif 107eb9086c3SLois Curfman McInnes h = ctx->error_rel*dot/(norm*norm); 10839e2f89bSBarry Smith 109eb9086c3SLois Curfman McInnes /* Evaluate function at F(u + ha) */ 110eb9086c3SLois Curfman McInnes ierr = VecWAXPY(&h,a,U,w); CHKERRQ(ierr); 11183e56afdSLois Curfman McInnes ierr = eval_fct(snes,w,y); CHKERRQ(ierr); 112195ee392SLois Curfman McInnes ierr = VecAXPY(&mone,F,y); CHKERRQ(ierr); 1135334005bSBarry Smith h = 1.0/h; 114195ee392SLois Curfman McInnes ierr = VecScale(&h,y); CHKERRQ(ierr); 115b4fd4287SBarry Smith if (ctx->sp) {ierr = PCNullSpaceRemove(ctx->sp,y); CHKERRQ(ierr);} 11657c37382SLois Curfman McInnes 117eb9086c3SLois Curfman McInnes PLogEventEnd(MAT_MatrixFreeMult,a,y,0,0); 11839e2f89bSBarry Smith return 0; 11939e2f89bSBarry Smith } 12083e56afdSLois Curfman McInnes 1214b828684SBarry Smith /*@C 1225392566eSBarry Smith SNESDefaultMatrixFreeMatCreate - Creates a matrix-free matrix 12350361f65SLois Curfman McInnes context for use with a SNES solver. This matrix can be used as 12450361f65SLois Curfman McInnes the Jacobian argument for the routine SNESSetJacobian(). 1255392566eSBarry Smith 1265392566eSBarry Smith Input Parameters: 127eb9086c3SLois Curfman McInnes . snes - the SNES context 1285392566eSBarry Smith . x - vector where SNES solution is to be stored. 1295392566eSBarry Smith 130eb9086c3SLois Curfman McInnes Output Parameter: 1315392566eSBarry Smith . J - the matrix-free matrix 1325392566eSBarry Smith 13365afa06eSLois Curfman McInnes Notes: 13465afa06eSLois Curfman McInnes The matrix-free matrix context merely contains the function pointers 13565afa06eSLois Curfman McInnes and work space for performing finite difference approximations of 13665afa06eSLois Curfman McInnes matrix operations such as matrix-vector products. 13765afa06eSLois Curfman McInnes 13865afa06eSLois Curfman McInnes The user should call MatDestroy() when finished with the matrix-free 13965afa06eSLois Curfman McInnes matrix context. 14065afa06eSLois Curfman McInnes 14165afa06eSLois Curfman McInnes .keywords: SNES, default, matrix-free, create, matrix 14265afa06eSLois Curfman McInnes 14365afa06eSLois Curfman McInnes .seealso: MatDestroy() 1445392566eSBarry Smith @*/ 1455392566eSBarry Smith int SNESDefaultMatrixFreeMatCreate(SNES snes,Vec x, Mat *J) 1465392566eSBarry Smith { 1475392566eSBarry Smith MPI_Comm comm; 1485392566eSBarry Smith MFCtx_Private *mfctx; 149eb9086c3SLois Curfman McInnes int n, nloc, ierr, flg; 1505392566eSBarry Smith 1510452661fSBarry Smith mfctx = (MFCtx_Private *) PetscMalloc(sizeof(MFCtx_Private)); CHKPTRQ(mfctx); 152464493b3SBarry Smith PLogObjectMemory(snes,sizeof(MFCtx_Private)); 153b4fd4287SBarry Smith mfctx->sp = 0; 1545392566eSBarry Smith mfctx->snes = snes; 155eb9086c3SLois Curfman McInnes mfctx->error_rel = 1.e-8; /* assumes double precision */ 156*639f9d9dSBarry Smith mfctx->umin = 1.e-6; 157eb9086c3SLois Curfman McInnes ierr = OptionsGetDouble(snes->prefix,"-snes_mf_err",&mfctx->error_rel,&flg); CHKERRQ(ierr); 158eb9086c3SLois Curfman McInnes ierr = OptionsGetDouble(snes->prefix,"-snes_mf_umin",&mfctx->umin,&flg); CHKERRQ(ierr); 159*639f9d9dSBarry Smith ierr = OptionsHasName(PETSC_NULL,"-help",&flg); CHKERRQ(ierr); 160*639f9d9dSBarry Smith if (flg) { 161*639f9d9dSBarry Smith PetscPrintf(snes->comm,"-snes_mf_err <err> set sqrt rel tol in function. Default 1.e-8\n"); 162*639f9d9dSBarry Smith PetscPrintf(snes->comm,"-snes_mf_umin <umin> see users manual. Default 1.e-8\n"); 163*639f9d9dSBarry Smith } 1645392566eSBarry Smith ierr = VecDuplicate(x,&mfctx->w); CHKERRQ(ierr); 165195ee392SLois Curfman McInnes ierr = PetscObjectGetComm((PetscObject)x,&comm); CHKERRQ(ierr); 166195ee392SLois Curfman McInnes ierr = VecGetSize(x,&n); CHKERRQ(ierr); 1677ddc982cSLois Curfman McInnes ierr = VecGetLocalSize(x,&nloc); CHKERRQ(ierr); 1687ddc982cSLois Curfman McInnes ierr = MatCreateShell(comm,nloc,n,n,n,(void*)mfctx,J); CHKERRQ(ierr); 1691c1c02c0SLois Curfman McInnes ierr = MatShellSetOperation(*J,MATOP_MULT,(void*)SNESMatrixFreeMult_Private); CHKERRQ(ierr); 1701c1c02c0SLois Curfman McInnes ierr = MatShellSetOperation(*J,MATOP_DESTROY,(void *)SNESMatrixFreeDestroy_Private); CHKERRQ(ierr); 1711c1c02c0SLois Curfman McInnes ierr = MatShellSetOperation(*J,MATOP_VIEW,(void *)SNESMatrixFreeView_Private); CHKERRQ(ierr); 172b9fa9cd0SBarry Smith PLogObjectParent(*J,mfctx->w); 173d370d78aSBarry Smith PLogObjectParent(snes,*J); 17481e6777dSBarry Smith return 0; 17581e6777dSBarry Smith } 17681e6777dSBarry Smith 177b4fd4287SBarry Smith /*@ 178eb9086c3SLois Curfman McInnes SNESSetMatrixFreeParameters - Sets the parameters for the approximation of 179eb9086c3SLois Curfman McInnes matrix-vector products using finite differences. 180eb9086c3SLois Curfman McInnes 181*639f9d9dSBarry Smith $ J(u)*a = [J(u+h*a) - J(u)]/h where 182*639f9d9dSBarry Smith $ h = error_rel*u'a/||a||^2 if |u'a| > umin*||a||_{1} 183*639f9d9dSBarry Smith $ = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2 else 184*639f9d9dSBarry Smith $ 185eb9086c3SLois Curfman McInnes Input Parameters: 186eb9086c3SLois Curfman McInnes . snes - the SNES context 187eb9086c3SLois Curfman McInnes . error_rel - relative error 188eb9086c3SLois Curfman McInnes . umin - minimum allowable u-value 189eb9086c3SLois Curfman McInnes 190eb9086c3SLois Curfman McInnes .keywords: SNES, matrix-free, parameters 191eb9086c3SLois Curfman McInnes @*/ 192eb9086c3SLois Curfman McInnes int SNESSetMatrixFreeParameters(SNES snes,double error,double umin) 193eb9086c3SLois Curfman McInnes { 194eb9086c3SLois Curfman McInnes MFCtx_Private *ctx; 195eb9086c3SLois Curfman McInnes int ierr; 196eb9086c3SLois Curfman McInnes Mat mat; 197eb9086c3SLois Curfman McInnes 198eb9086c3SLois Curfman McInnes ierr = SNESGetJacobian(snes,&mat,PETSC_NULL,PETSC_NULL); CHKERRQ(ierr); 199eb9086c3SLois Curfman McInnes ierr = MatShellGetContext(mat,(void **)&ctx); CHKERRQ(ierr); 200eb9086c3SLois Curfman McInnes if (ctx) { 201eb9086c3SLois Curfman McInnes if (error != PETSC_DEFAULT) ctx->error_rel = error; 202eb9086c3SLois Curfman McInnes if (umin != PETSC_DEFAULT) ctx->umin = umin; 203eb9086c3SLois Curfman McInnes } 204eb9086c3SLois Curfman McInnes return 0; 205eb9086c3SLois Curfman McInnes } 206eb9086c3SLois Curfman McInnes 207eb9086c3SLois Curfman McInnes /*@ 20821a45821SLois Curfman McInnes SNESDefaultMatrixFreeMatAddNullSpace - Provides a null space that 209f525115eSLois Curfman McInnes an operator is supposed to have. Since roundoff will create a 210b4fd4287SBarry Smith small component in the null space, if you know the null space 211b4fd4287SBarry Smith you may have it automatically removed. 212b4fd4287SBarry Smith 213b4fd4287SBarry Smith Input Parameters: 21421a45821SLois Curfman McInnes . J - the matrix-free matrix context 21521a45821SLois Curfman McInnes . has_cnst - PETSC_TRUE or PETSC_FALSE, indicating if null space has constants 216b4fd4287SBarry Smith . n - number of vectors (excluding constant vector) in null space 21721a45821SLois Curfman McInnes . vecs - the vectors that span the null space (excluding the constant vector); 218b4fd4287SBarry Smith . these vectors must be orthonormal 219b4fd4287SBarry Smith 220b4fd4287SBarry Smith .keywords: SNES, matrix-free, null space 221b4fd4287SBarry Smith @*/ 222b4fd4287SBarry Smith int SNESDefaultMatrixFreeMatAddNullSpace(Mat J,int has_cnst,int n,Vec *vecs) 223b4fd4287SBarry Smith { 224b4fd4287SBarry Smith int ierr; 225b4fd4287SBarry Smith MFCtx_Private *ctx; 226b4fd4287SBarry Smith MPI_Comm comm; 227b4fd4287SBarry Smith 228b4fd4287SBarry Smith PetscObjectGetComm((PetscObject)J,&comm); 229b4fd4287SBarry Smith 230b4fd4287SBarry Smith ierr = MatShellGetContext(J,(void **)&ctx); CHKERRQ(ierr); 231b4fd4287SBarry Smith /* no context indicates that it is not the "matrix free" matrix type */ 232b4fd4287SBarry Smith if (!ctx) return 0; 233b4fd4287SBarry Smith ierr = PCNullSpaceCreate(comm,has_cnst,n,vecs,&ctx->sp); CHKERRQ(ierr); 234b4fd4287SBarry Smith return 0; 235b4fd4287SBarry Smith } 236b4fd4287SBarry Smith 2375334005bSBarry Smith 2385334005bSBarry Smith 2395334005bSBarry Smith 240