xref: /petsc/src/snes/mf/snesmfj.c (revision a6570f20d5bf426f46356aeda2a42fd24720f376)
163dd3a1aSKris Buschelman #define PETSCSNES_DLL
281e6777dSBarry Smith 
37e9d5209SBarry Smith #include "src/mat/matimpl.h"
4325e03aeSBarry Smith #include "src/snes/mf/snesmfj.h"   /*I  "petscsnes.h"   I*/
581e6777dSBarry Smith 
6b0a32e0cSBarry Smith PetscFList MatSNESMPetscFList         = 0;
74c49b128SBarry Smith PetscTruth MatSNESMFRegisterAllCalled = PETSC_FALSE;
8a4d4d686SBarry Smith 
963dd3a1aSKris Buschelman PetscCookie PETSCSNES_DLLEXPORT MATSNESMFCTX_COOKIE = 0;
1046129b97SKris Buschelman PetscEvent  MATSNESMF_Mult = 0;
1146129b97SKris Buschelman 
124a2ae208SSatish Balay #undef __FUNCT__
134a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFSetType"
14fd4bdd07SBarry Smith /*@C
1565f2ba5bSLois Curfman McInnes     MatSNESMFSetType - Sets the method that is used to compute the
16b0a32e0cSBarry Smith     differencing parameter for finite differene matrix-free formulations.
179a6cb015SBarry Smith 
189a6cb015SBarry Smith     Input Parameters:
197e9d5209SBarry Smith +   mat - the "matrix-free" matrix created via MatCreateSNESMF(), or MatCreateMF()
207e9d5209SBarry Smith           or MatSetType(mat,MATMFFD);
21efb30889SBarry Smith -   ftype - the type requested, either MATSNESMF_WP or MATSNESMF_DS
229a6cb015SBarry Smith 
2315091d37SBarry Smith     Level: advanced
2415091d37SBarry Smith 
2565f2ba5bSLois Curfman McInnes     Notes:
2665f2ba5bSLois Curfman McInnes     For example, such routines can compute h for use in
2765f2ba5bSLois Curfman McInnes     Jacobian-vector products of the form
2865f2ba5bSLois Curfman McInnes 
2965f2ba5bSLois Curfman McInnes                         F(x+ha) - F(x)
30ef4ad1fdSLois Curfman McInnes           F'(u)a  ~=  ----------------
3165f2ba5bSLois Curfman McInnes                               h
3265f2ba5bSLois Curfman McInnes 
33f1af5d2fSBarry Smith .seealso: MatCreateSNESMF(), MatSNESMFRegisterDynamic)
349a6cb015SBarry Smith @*/
3563dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetType(Mat mat,const MatSNESMFType ftype)
36b9fa9cd0SBarry Smith {
37dfbe8321SBarry Smith   PetscErrorCode ierr,(*r)(MatSNESMFCtx);
387e9d5209SBarry Smith   MatSNESMFCtx   ctx = (MatSNESMFCtx)mat->data;
396831982aSBarry Smith   PetscTruth     match;
40a4d4d686SBarry Smith 
41a4d4d686SBarry Smith   PetscFunctionBegin;
424482741eSBarry Smith   PetscValidHeaderSpecific(mat,MAT_COOKIE,1);
434482741eSBarry Smith   PetscValidCharPointer(ftype,2);
440f5bd95cSBarry Smith 
459a6cb015SBarry Smith   /* already set, so just return */
466831982aSBarry Smith   ierr = PetscTypeCompare((PetscObject)ctx,ftype,&match);CHKERRQ(ierr);
470f5bd95cSBarry Smith   if (match) PetscFunctionReturn(0);
48a4d4d686SBarry Smith 
499a6cb015SBarry Smith   /* destroy the old one if it exists */
509a6cb015SBarry Smith   if (ctx->ops->destroy) {
519a6cb015SBarry Smith     ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr);
529a6cb015SBarry Smith   }
539a6cb015SBarry Smith 
5465f2ba5bSLois Curfman McInnes   /* Get the function pointers for the requrested method */
555a655dc6SBarry Smith   if (!MatSNESMFRegisterAllCalled) {ierr = MatSNESMFRegisterAll(PETSC_NULL);CHKERRQ(ierr);}
56b9617806SBarry Smith   ierr =  PetscFListFind(ctx->comm,MatSNESMPetscFList,ftype,(void (**)(void)) &r);CHKERRQ(ierr);
57958c9bccSBarry Smith   if (!r) SETERRQ1(PETSC_ERR_ARG_UNKNOWN_TYPE,"Unknown MatSNESMF type %s given",ftype);
589a6cb015SBarry Smith   ierr = (*r)(ctx);CHKERRQ(ierr);
596831982aSBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)ctx,ftype);CHKERRQ(ierr);
609a6cb015SBarry Smith   PetscFunctionReturn(0);
619a6cb015SBarry Smith }
629a6cb015SBarry Smith 
636849ba73SBarry Smith typedef PetscErrorCode (*FCN1)(Vec,void*); /* force argument to next function to not be extern C*/
64c5c390f1SBarry Smith EXTERN_C_BEGIN
6587828ca2SBarry Smith #undef __FUNCT__
6687828ca2SBarry Smith #define __FUNCT__ "MatSNESMFSetFunctioniBase_FD"
6763dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetFunctioniBase_FD(Mat mat,FCN1 func)
6887828ca2SBarry Smith {
6987828ca2SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)mat->data;
7087828ca2SBarry Smith 
7187828ca2SBarry Smith   PetscFunctionBegin;
7287828ca2SBarry Smith   ctx->funcisetbase = func;
7387828ca2SBarry Smith   PetscFunctionReturn(0);
7487828ca2SBarry Smith }
75c5c390f1SBarry Smith EXTERN_C_END
7687828ca2SBarry Smith 
77a7cc72afSBarry Smith typedef PetscErrorCode (*FCN2)(PetscInt,Vec,PetscScalar*,void*); /* force argument to next function to not be extern C*/
78c5c390f1SBarry Smith EXTERN_C_BEGIN
7987828ca2SBarry Smith #undef __FUNCT__
8087828ca2SBarry Smith #define __FUNCT__ "MatSNESMFSetFunctioni_FD"
8163dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetFunctioni_FD(Mat mat,FCN2 funci)
8287828ca2SBarry Smith {
8387828ca2SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)mat->data;
8487828ca2SBarry Smith 
8587828ca2SBarry Smith   PetscFunctionBegin;
8687828ca2SBarry Smith   ctx->funci = funci;
8787828ca2SBarry Smith   PetscFunctionReturn(0);
8887828ca2SBarry Smith }
89c5c390f1SBarry Smith EXTERN_C_END
9087828ca2SBarry Smith 
919a6cb015SBarry Smith 
924a2ae208SSatish Balay #undef __FUNCT__
934a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFRegister"
9463dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFRegister(const char sname[],const char path[],const char name[],PetscErrorCode (*function)(MatSNESMFCtx))
959a6cb015SBarry Smith {
96dfbe8321SBarry Smith   PetscErrorCode ierr;
97e2d1d2b7SBarry Smith   char           fullname[PETSC_MAX_PATH_LEN];
989a6cb015SBarry Smith 
999a6cb015SBarry Smith   PetscFunctionBegin;
100b0a32e0cSBarry Smith   ierr = PetscFListConcat(path,name,fullname);CHKERRQ(ierr);
101c134de8dSSatish Balay   ierr = PetscFListAdd(&MatSNESMPetscFList,sname,fullname,(void (*)(void))function);CHKERRQ(ierr);
1029a6cb015SBarry Smith   PetscFunctionReturn(0);
1039a6cb015SBarry Smith }
1049a6cb015SBarry Smith 
1059a6cb015SBarry Smith 
1064a2ae208SSatish Balay #undef __FUNCT__
1074a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFRegisterDestroy"
1089a6cb015SBarry Smith /*@C
1095a655dc6SBarry Smith    MatSNESMFRegisterDestroy - Frees the list of MatSNESMF methods that were
110f1af5d2fSBarry Smith    registered by MatSNESMFRegisterDynamic).
1119a6cb015SBarry Smith 
1129a6cb015SBarry Smith    Not Collective
1139a6cb015SBarry Smith 
11415091d37SBarry Smith    Level: developer
11515091d37SBarry Smith 
1165a655dc6SBarry Smith .keywords: MatSNESMF, register, destroy
1179a6cb015SBarry Smith 
118f1af5d2fSBarry Smith .seealso: MatSNESMFRegisterDynamic), MatSNESMFRegisterAll()
1199a6cb015SBarry Smith @*/
12063dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFRegisterDestroy(void)
1219a6cb015SBarry Smith {
122dfbe8321SBarry Smith   PetscErrorCode ierr;
1239a6cb015SBarry Smith 
1249a6cb015SBarry Smith   PetscFunctionBegin;
125b0a32e0cSBarry Smith   if (MatSNESMPetscFList) {
126b0a32e0cSBarry Smith     ierr = PetscFListDestroy(&MatSNESMPetscFList);CHKERRQ(ierr);
127b0a32e0cSBarry Smith     MatSNESMPetscFList = 0;
1289a6cb015SBarry Smith   }
1294c49b128SBarry Smith   MatSNESMFRegisterAllCalled = PETSC_FALSE;
1309a6cb015SBarry Smith   PetscFunctionReturn(0);
1319a6cb015SBarry Smith }
1329a6cb015SBarry Smith 
1339a6cb015SBarry Smith /* ----------------------------------------------------------------------------------------*/
1344a2ae208SSatish Balay #undef __FUNCT__
1358a124369SBarry Smith #define __FUNCT__ "MatDestroy_MFFD"
136dfbe8321SBarry Smith PetscErrorCode MatDestroy_MFFD(Mat mat)
137a4d4d686SBarry Smith {
138dfbe8321SBarry Smith   PetscErrorCode ierr;
1397e9d5209SBarry Smith   MatSNESMFCtx   ctx = (MatSNESMFCtx)mat->data;
140fae171e0SBarry Smith 
1413a40ed3dSBarry Smith   PetscFunctionBegin;
142abc0a331SBarry Smith   if (ctx->w) {
143b9fa9cd0SBarry Smith     ierr = VecDestroy(ctx->w);CHKERRQ(ierr);
144ba6a83e5SMatthew Knepley   }
1459a6cb015SBarry Smith   if (ctx->ops->destroy) {ierr = (*ctx->ops->destroy)(ctx);CHKERRQ(ierr);}
14674637425SBarry Smith   if (ctx->sp) {ierr = MatNullSpaceDestroy(ctx->sp);CHKERRQ(ierr);}
147d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(ctx);CHKERRQ(ierr);
148901853e0SKris Buschelman 
149901853e0SKris Buschelman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatSNESMFSetBase_C","",PETSC_NULL);CHKERRQ(ierr);
150901853e0SKris Buschelman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatSNESMFSetFunctioniBase_C","",PETSC_NULL);CHKERRQ(ierr);
151901853e0SKris Buschelman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatSNESMFSetFunctioni_C","",PETSC_NULL);CHKERRQ(ierr);
152901853e0SKris Buschelman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatSNESMFSetCheckh_C","",PETSC_NULL);CHKERRQ(ierr);
153901853e0SKris Buschelman 
1543a40ed3dSBarry Smith   PetscFunctionReturn(0);
155b9fa9cd0SBarry Smith }
15650361f65SLois Curfman McInnes 
1574a2ae208SSatish Balay #undef __FUNCT__
1588a124369SBarry Smith #define __FUNCT__ "MatView_MFFD"
15939e2f89bSBarry Smith /*
1608a124369SBarry Smith    MatSNESMFView_MFFD - Views matrix-free parameters.
1618f6e3e37SBarry Smith 
16239e2f89bSBarry Smith */
163dfbe8321SBarry Smith PetscErrorCode MatView_MFFD(Mat J,PetscViewer viewer)
164eb9086c3SLois Curfman McInnes {
165dfbe8321SBarry Smith   PetscErrorCode ierr;
1667e9d5209SBarry Smith   MatSNESMFCtx   ctx = (MatSNESMFCtx)J->data;
16732077d6dSBarry Smith   PetscTruth     iascii;
168eb9086c3SLois Curfman McInnes 
1693a40ed3dSBarry Smith   PetscFunctionBegin;
17032077d6dSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr);
17132077d6dSBarry Smith   if (iascii) {
172b0a32e0cSBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"  SNES matrix-free approximation:\n");CHKERRQ(ierr);
173a83599f4SBarry Smith      ierr = PetscViewerASCIIPrintf(viewer,"    err=%G (relative error in function evaluation)\n",ctx->error_rel);CHKERRQ(ierr);
174473c83c3SBarry Smith      if (!ctx->type_name) {
175b0a32e0cSBarry Smith        ierr = PetscViewerASCIIPrintf(viewer,"    The compute h routine has not yet been set\n");CHKERRQ(ierr);
176473c83c3SBarry Smith      } else {
177b0a32e0cSBarry Smith        ierr = PetscViewerASCIIPrintf(viewer,"    Using %s compute h routine\n",ctx->type_name);CHKERRQ(ierr);
178473c83c3SBarry Smith      }
1799a6cb015SBarry Smith      if (ctx->ops->view) {
1809a6cb015SBarry Smith        ierr = (*ctx->ops->view)(ctx,viewer);CHKERRQ(ierr);
1819a6cb015SBarry Smith      }
1825cd90555SBarry Smith   } else {
18379a5c55eSBarry Smith     SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported for SNES matrix free matrix",((PetscObject)viewer)->type_name);
184eb9086c3SLois Curfman McInnes   }
1853a40ed3dSBarry Smith   PetscFunctionReturn(0);
186eb9086c3SLois Curfman McInnes }
187eb9086c3SLois Curfman McInnes 
1884a2ae208SSatish Balay #undef __FUNCT__
1898a124369SBarry Smith #define __FUNCT__ "MatAssemblyEnd_MFFD"
190be726c96SBarry Smith /*
19132dfb669SBarry Smith    MatAssemblyEnd_MFFD - Resets the ctx->ncurrenth to zero. This
19265f2ba5bSLois Curfman McInnes    allows the user to indicate the beginning of a new linear solve by calling
193be726c96SBarry Smith    MatAssemblyXXX() on the matrix free matrix. This then allows the
19465f2ba5bSLois Curfman McInnes    MatSNESMFCreate_WP() to properly compute ||U|| only the first time
19565f2ba5bSLois Curfman McInnes    in the linear solver rather than every time.
196be726c96SBarry Smith */
197dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MFFD(Mat J,MatAssemblyType mt)
198be726c96SBarry Smith {
199dfbe8321SBarry Smith   PetscErrorCode ierr;
2007e9d5209SBarry Smith   MatSNESMFCtx   j = (MatSNESMFCtx)J->data;
201be726c96SBarry Smith 
202be726c96SBarry Smith   PetscFunctionBegin;
2035a655dc6SBarry Smith   ierr = MatSNESMFResetHHistory(J);CHKERRQ(ierr);
204b0a32e0cSBarry Smith   if (j->usesnes) {
2051d1367b7SBarry Smith     ierr = SNESGetSolution(j->snes,&j->current_u);CHKERRQ(ierr);
2061d1367b7SBarry Smith     ierr = SNESGetFunction(j->snes,&j->current_f,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
207958c9bccSBarry Smith     if (!j->w) {
2082740c1caSMatthew Knepley       ierr = VecDuplicate(j->current_u, &j->w);CHKERRQ(ierr);
2092740c1caSMatthew Knepley     }
2101d1367b7SBarry Smith   }
211c5c390f1SBarry Smith   j->vshift = 0.0;
212c5c390f1SBarry Smith   j->vscale = 1.0;
213be726c96SBarry Smith   PetscFunctionReturn(0);
214be726c96SBarry Smith }
215be726c96SBarry Smith 
2164a2ae208SSatish Balay #undef __FUNCT__
2178a124369SBarry Smith #define __FUNCT__ "MatMult_MFFD"
218eb9086c3SLois Curfman McInnes /*
219adb62b0dSMatthew Knepley   MatMult_MFFD - Default matrix-free form for Jacobian-vector product, y = F'(u)*a:
220a4d4d686SBarry Smith 
2219a6cb015SBarry Smith         y ~= (F(u + ha) - F(u))/h,
222eb9086c3SLois Curfman McInnes   where F = nonlinear function, as set by SNESSetFunction()
223eb9086c3SLois Curfman McInnes         u = current iterate
224eb9086c3SLois Curfman McInnes         h = difference interval
225eb9086c3SLois Curfman McInnes */
226dfbe8321SBarry Smith PetscErrorCode MatMult_MFFD(Mat mat,Vec a,Vec y)
22739e2f89bSBarry Smith {
2287e9d5209SBarry Smith   MatSNESMFCtx   ctx = (MatSNESMFCtx)mat->data;
229fae171e0SBarry Smith   SNES           snes;
230efb30889SBarry Smith   PetscScalar    h;
231fae171e0SBarry Smith   Vec            w,U,F;
232dfbe8321SBarry Smith   PetscErrorCode ierr,(*eval_fct)(SNES,Vec,Vec)=0;
2334dc4c822SBarry Smith   PetscTruth     zeroa;
23439e2f89bSBarry Smith 
2353a40ed3dSBarry Smith   PetscFunctionBegin;
2369a6cb015SBarry Smith   /* We log matrix-free matrix-vector products separately, so that we can
2379a6cb015SBarry Smith      separate the performance monitoring from the cases that use conventional
2389a6cb015SBarry Smith      storage.  We may eventually modify event logging to associate events
2399a6cb015SBarry Smith      with particular objects, hence alleviating the more general problem. */
24046129b97SKris Buschelman   ierr = PetscLogEventBegin(MATSNESMF_Mult,a,y,0,0);CHKERRQ(ierr);
24156cd22aeSBarry Smith 
242fae171e0SBarry Smith   snes = ctx->snes;
243fae171e0SBarry Smith   w    = ctx->w;
2441d1367b7SBarry Smith   U    = ctx->current_u;
24550361f65SLois Curfman McInnes 
24685614651SBarry Smith   /*
24785614651SBarry Smith       Compute differencing parameter
24885614651SBarry Smith   */
2499a6cb015SBarry Smith   if (!ctx->ops->compute) {
2502f859189SBarry Smith     ierr = MatSNESMFSetType(mat,MATSNESMF_WP);CHKERRQ(ierr);
2515a655dc6SBarry Smith     ierr = MatSNESMFSetFromOptions(mat);CHKERRQ(ierr);
2529a6cb015SBarry Smith   }
2534dc4c822SBarry Smith   ierr = (*ctx->ops->compute)(ctx,U,a,&h,&zeroa);CHKERRQ(ierr);
2544dc4c822SBarry Smith   if (zeroa) {
25519bdad02SBarry Smith     ierr = VecSet(y,0.0);CHKERRQ(ierr);
2564dc4c822SBarry Smith     PetscFunctionReturn(0);
2574dc4c822SBarry Smith   }
258a4d4d686SBarry Smith 
2595b7f0c42SBarry Smith   if (ctx->checkh) {
2605b7f0c42SBarry Smith     ierr = (*ctx->checkh)(U,a,&h,ctx->checkhctx);CHKERRQ(ierr);
2615b7f0c42SBarry Smith   }
2625b7f0c42SBarry Smith 
263a4d4d686SBarry Smith   /* keep a record of the current differencing parameter h */
264a4d4d686SBarry Smith   ctx->currenth = h;
265aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX)
266ae15b995SBarry Smith   ierr = PetscInfo2(mat,"Current differencing parameter: %G + %G i\n",PetscRealPart(h),PetscImaginaryPart(h));CHKERRQ(ierr);
267a4d4d686SBarry Smith #else
268ae15b995SBarry Smith   ierr = PetscInfo1(mat,"Current differencing parameter: %15.12e\n",h);CHKERRQ(ierr);
269a4d4d686SBarry Smith #endif
270a4d4d686SBarry Smith   if (ctx->historyh && ctx->ncurrenth < ctx->maxcurrenth) {
27185614651SBarry Smith     ctx->historyh[ctx->ncurrenth] = h;
272a4d4d686SBarry Smith   }
27385614651SBarry Smith   ctx->ncurrenth++;
274a4d4d686SBarry Smith 
27585614651SBarry Smith   /* w = u + ha */
2762dcb1b2aSMatthew Knepley   ierr = VecWAXPY(w,h,a,U);CHKERRQ(ierr);
27785614651SBarry Smith 
278b0a32e0cSBarry Smith   if (ctx->usesnes) {
27985614651SBarry Smith     eval_fct = SNESComputeFunction;
2801d1367b7SBarry Smith     F    = ctx->current_f;
2811302d50aSBarry Smith     if (!F) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"You must call MatAssembly() even on matrix-free matrices");
28239903ad8SBarry Smith     ierr = (*eval_fct)(snes,w,y);CHKERRQ(ierr);
28385614651SBarry Smith   } else {
28485614651SBarry Smith     F = ctx->funcvec;
28585614651SBarry Smith     /* compute func(U) as base for differencing */
28685614651SBarry Smith     if (ctx->ncurrenth == 1) {
28785614651SBarry Smith       ierr = (*ctx->func)(snes,U,F,ctx->funcctx);CHKERRQ(ierr);
28885614651SBarry Smith     }
28985614651SBarry Smith     ierr = (*ctx->func)(snes,w,y,ctx->funcctx);CHKERRQ(ierr);
29085614651SBarry Smith   }
291a4d4d686SBarry Smith 
292efb30889SBarry Smith   ierr = VecAXPY(y,-1.0,F);CHKERRQ(ierr);
293efb30889SBarry Smith   ierr = VecScale(y,1.0/h);CHKERRQ(ierr);
294c5c390f1SBarry Smith 
2952dcb1b2aSMatthew Knepley   ierr = VecAXPBY(y,ctx->vshift,ctx->vscale,a);CHKERRQ(ierr);
296c5c390f1SBarry Smith 
29774637425SBarry Smith   if (ctx->sp) {ierr = MatNullSpaceRemove(ctx->sp,y,PETSC_NULL);CHKERRQ(ierr);}
298a4d4d686SBarry Smith 
29946129b97SKris Buschelman   ierr = PetscLogEventEnd(MATSNESMF_Mult,a,y,0,0);CHKERRQ(ierr);
300a4d4d686SBarry Smith   PetscFunctionReturn(0);
301a4d4d686SBarry Smith }
302a4d4d686SBarry Smith 
3034a2ae208SSatish Balay #undef __FUNCT__
3048a124369SBarry Smith #define __FUNCT__ "MatGetDiagonal_MFFD"
305cf57b110SBarry Smith /*
3068a124369SBarry Smith   MatGetDiagonal_MFFD - Gets the diagonal for a matrix free matrix
307cf57b110SBarry Smith 
308cf57b110SBarry Smith         y ~= (F(u + ha) - F(u))/h,
309cf57b110SBarry Smith   where F = nonlinear function, as set by SNESSetFunction()
310cf57b110SBarry Smith         u = current iterate
311cf57b110SBarry Smith         h = difference interval
312cf57b110SBarry Smith */
313dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MFFD(Mat mat,Vec a)
314cf57b110SBarry Smith {
3157e9d5209SBarry Smith   MatSNESMFCtx   ctx = (MatSNESMFCtx)mat->data;
316ea709b57SSatish Balay   PetscScalar    h,*aa,*ww,v;
31777d8c4bbSBarry Smith   PetscReal      epsilon = PETSC_SQRT_MACHINE_EPSILON,umin = 100.0*PETSC_SQRT_MACHINE_EPSILON;
31865df01d8SBarry Smith   Vec            w,U;
3196849ba73SBarry Smith   PetscErrorCode ierr;
320a7cc72afSBarry Smith   PetscInt       i,rstart,rend;
321cf57b110SBarry Smith 
322cf57b110SBarry Smith   PetscFunctionBegin;
323cf57b110SBarry Smith   if (!ctx->funci) {
3241302d50aSBarry Smith     SETERRQ(PETSC_ERR_ORDER,"Requires calling MatSNESMFSetFunctioni() first");
325cf57b110SBarry Smith   }
326cf57b110SBarry Smith 
327cf57b110SBarry Smith   w    = ctx->w;
328cf57b110SBarry Smith   U    = ctx->current_u;
329cf57b110SBarry Smith   ierr = (*ctx->func)(0,U,a,ctx->funcctx);CHKERRQ(ierr);
330cf57b110SBarry Smith   ierr = (*ctx->funcisetbase)(U,ctx->funcctx);CHKERRQ(ierr);
331cf57b110SBarry Smith   ierr = VecCopy(U,w);CHKERRQ(ierr);
332cf57b110SBarry Smith 
333cf57b110SBarry Smith   ierr = VecGetOwnershipRange(a,&rstart,&rend);CHKERRQ(ierr);
334cf57b110SBarry Smith   ierr = VecGetArray(a,&aa);CHKERRQ(ierr);
335cf57b110SBarry Smith   for (i=rstart; i<rend; i++) {
336cf57b110SBarry Smith     ierr = VecGetArray(w,&ww);CHKERRQ(ierr);
337cf57b110SBarry Smith     h  = ww[i-rstart];
338cf57b110SBarry Smith     if (h == 0.0) h = 1.0;
339cf57b110SBarry Smith #if !defined(PETSC_USE_COMPLEX)
340cf57b110SBarry Smith     if (h < umin && h >= 0.0)      h = umin;
341cf57b110SBarry Smith     else if (h < 0.0 && h > -umin) h = -umin;
342cf57b110SBarry Smith #else
343cf57b110SBarry Smith     if (PetscAbsScalar(h) < umin && PetscRealPart(h) >= 0.0)     h = umin;
344cf57b110SBarry Smith     else if (PetscRealPart(h) < 0.0 && PetscAbsScalar(h) < umin) h = -umin;
345cf57b110SBarry Smith #endif
346cf57b110SBarry Smith     h     *= epsilon;
347cf57b110SBarry Smith 
348cf57b110SBarry Smith     ww[i-rstart] += h;
349cf57b110SBarry Smith     ierr = VecRestoreArray(w,&ww);CHKERRQ(ierr);
350cf57b110SBarry Smith     ierr          = (*ctx->funci)(i,w,&v,ctx->funcctx);CHKERRQ(ierr);
351cf57b110SBarry Smith     aa[i-rstart]  = (v - aa[i-rstart])/h;
352c5c390f1SBarry Smith 
353c5c390f1SBarry Smith     /* possibly shift and scale result */
354c5c390f1SBarry Smith     aa[i - rstart] = ctx->vshift + ctx->vscale*aa[i-rstart];
355c5c390f1SBarry Smith 
356cf57b110SBarry Smith     ierr = VecGetArray(w,&ww);CHKERRQ(ierr);
357cf57b110SBarry Smith     ww[i-rstart] -= h;
358cf57b110SBarry Smith     ierr = VecRestoreArray(w,&ww);CHKERRQ(ierr);
359cf57b110SBarry Smith   }
360cf57b110SBarry Smith   ierr = VecRestoreArray(a,&aa);CHKERRQ(ierr);
361cf57b110SBarry Smith   PetscFunctionReturn(0);
362cf57b110SBarry Smith }
363cf57b110SBarry Smith 
364cf57b110SBarry Smith #undef __FUNCT__
365c5c390f1SBarry Smith #define __FUNCT__ "MatShift_MFFD"
366f4df32b1SMatthew Knepley PetscErrorCode MatShift_MFFD(Mat Y,PetscScalar a)
367c5c390f1SBarry Smith {
368c5c390f1SBarry Smith   MatSNESMFCtx shell = (MatSNESMFCtx)Y->data;
369c5c390f1SBarry Smith   PetscFunctionBegin;
370f4df32b1SMatthew Knepley   shell->vshift += a;
371c5c390f1SBarry Smith   PetscFunctionReturn(0);
372c5c390f1SBarry Smith }
373c5c390f1SBarry Smith 
374c5c390f1SBarry Smith #undef __FUNCT__
375c5c390f1SBarry Smith #define __FUNCT__ "MatScale_MFFD"
376f4df32b1SMatthew Knepley PetscErrorCode MatScale_MFFD(Mat Y,PetscScalar a)
377c5c390f1SBarry Smith {
378c5c390f1SBarry Smith   MatSNESMFCtx shell = (MatSNESMFCtx)Y->data;
379c5c390f1SBarry Smith   PetscFunctionBegin;
380f4df32b1SMatthew Knepley   shell->vscale *= a;
381c5c390f1SBarry Smith   PetscFunctionReturn(0);
382c5c390f1SBarry Smith }
383c5c390f1SBarry Smith 
384c5c390f1SBarry Smith 
385c5c390f1SBarry Smith #undef __FUNCT__
3864a2ae208SSatish Balay #define __FUNCT__ "MatCreateSNESMF"
38752baeb72SSatish Balay /*@
38865f2ba5bSLois Curfman McInnes    MatCreateSNESMF - Creates a matrix-free matrix context for use with
38965f2ba5bSLois Curfman McInnes    a SNES solver.  This matrix can be used as the Jacobian argument for
39065f2ba5bSLois Curfman McInnes    the routine SNESSetJacobian().
391a4d4d686SBarry Smith 
392a4d4d686SBarry Smith    Collective on SNES and Vec
393a4d4d686SBarry Smith 
394a4d4d686SBarry Smith    Input Parameters:
395a4d4d686SBarry Smith +  snes - the SNES context
396a4d4d686SBarry Smith -  x - vector where SNES solution is to be stored.
397a4d4d686SBarry Smith 
398a4d4d686SBarry Smith    Output Parameter:
399a4d4d686SBarry Smith .  J - the matrix-free matrix
400a4d4d686SBarry Smith 
40115091d37SBarry Smith    Level: advanced
40215091d37SBarry Smith 
403a4d4d686SBarry Smith    Notes:
404a4d4d686SBarry Smith    The matrix-free matrix context merely contains the function pointers
405a4d4d686SBarry Smith    and work space for performing finite difference approximations of
40665f2ba5bSLois Curfman McInnes    Jacobian-vector products, F'(u)*a,
4079a6cb015SBarry Smith 
4089a6cb015SBarry Smith    The default code uses the following approach to compute h
409a4d4d686SBarry Smith 
410a4d4d686SBarry Smith .vb
41165f2ba5bSLois Curfman McInnes      F'(u)*a = [F(u+h*a) - F(u)]/h where
412a4d4d686SBarry Smith      h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
413a4d4d686SBarry Smith        = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   otherwise
414a4d4d686SBarry Smith  where
415a4d4d686SBarry Smith      error_rel = square root of relative error in function evaluation
416a4d4d686SBarry Smith      umin = minimum iterate parameter
417a4d4d686SBarry Smith .ve
418efb30889SBarry Smith    (see MATSNESMF_WP or MATSNESMF_DS)
419a4d4d686SBarry Smith 
4205a655dc6SBarry Smith    The user can set the error_rel via MatSNESMFSetFunctionError() and
42165f2ba5bSLois Curfman McInnes    umin via MatSNESMFDefaultSetUmin(); see the nonlinear solvers chapter
42265f2ba5bSLois Curfman McInnes    of the users manual for details.
423a4d4d686SBarry Smith 
424a4d4d686SBarry Smith    The user should call MatDestroy() when finished with the matrix-free
425a4d4d686SBarry Smith    matrix context.
426a4d4d686SBarry Smith 
427a4d4d686SBarry Smith    Options Database Keys:
428a4d4d686SBarry Smith +  -snes_mf_err <error_rel> - Sets error_rel
429efb30889SBarry Smith +  -snes_mf_type - wp or ds (see MATSNESMF_WP or MATSNESMF_DS)
4309a6cb015SBarry Smith .  -snes_mf_unim <umin> - Sets umin (for default PETSc routine that computes h only)
431a4d4d686SBarry Smith -  -snes_mf_ksp_monitor - KSP monitor routine that prints differencing h
432a4d4d686SBarry Smith 
433a4d4d686SBarry Smith .keywords: SNES, default, matrix-free, create, matrix
434a4d4d686SBarry Smith 
4355a655dc6SBarry Smith .seealso: MatDestroy(), MatSNESMFSetFunctionError(), MatSNESMFDefaultSetUmin()
4361d1367b7SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(), MatCreateMF(),
437fed8bd04SBarry Smith           MatSNESMFGetH(),MatSNESMFKSPMonitor(), MatSNESMFRegisterDynamic), MatSNESMFComputeJacobian()
438a4d4d686SBarry Smith 
439a4d4d686SBarry Smith @*/
44063dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatCreateSNESMF(SNES snes,Vec x,Mat *J)
441a4d4d686SBarry Smith {
4421d1367b7SBarry Smith   MatSNESMFCtx   mfctx;
443dfbe8321SBarry Smith   PetscErrorCode ierr;
4441d1367b7SBarry Smith 
4451d1367b7SBarry Smith   PetscFunctionBegin;
4461d1367b7SBarry Smith   ierr = MatCreateMF(x,J);CHKERRQ(ierr);
4477e9d5209SBarry Smith 
4487e9d5209SBarry Smith   mfctx          = (MatSNESMFCtx)(*J)->data;
4491d1367b7SBarry Smith   mfctx->snes    = snes;
450b0a32e0cSBarry Smith   mfctx->usesnes = PETSC_TRUE;
45152e6d16bSBarry Smith   ierr = PetscLogObjectParent(snes,*J);CHKERRQ(ierr);
4521d1367b7SBarry Smith   PetscFunctionReturn(0);
4531d1367b7SBarry Smith }
4541d1367b7SBarry Smith 
455cf3bea43SBarry Smith EXTERN_C_BEGIN
456cf3bea43SBarry Smith #undef __FUNCT__
457cf3bea43SBarry Smith #define __FUNCT__ "MatSNESMFSetBase_FD"
45863dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetBase_FD(Mat J,Vec U)
459cf3bea43SBarry Smith {
460dfbe8321SBarry Smith   PetscErrorCode ierr;
4617e9d5209SBarry Smith   MatSNESMFCtx   ctx = (MatSNESMFCtx)J->data;
462cf3bea43SBarry Smith 
463cf3bea43SBarry Smith   PetscFunctionBegin;
464cf3bea43SBarry Smith   ierr = MatSNESMFResetHHistory(J);CHKERRQ(ierr);
465cf3bea43SBarry Smith   ctx->current_u = U;
466cf3bea43SBarry Smith   ctx->usesnes   = PETSC_FALSE;
467958c9bccSBarry Smith   if (!ctx->w) {
468ba6a83e5SMatthew Knepley     ierr = VecDuplicate(ctx->current_u, &ctx->w);CHKERRQ(ierr);
469ba6a83e5SMatthew Knepley   }
47032dfb669SBarry Smith   J->assembled = PETSC_TRUE;
471cf3bea43SBarry Smith   PetscFunctionReturn(0);
472cf3bea43SBarry Smith }
473cf3bea43SBarry Smith EXTERN_C_END
4746849ba73SBarry Smith typedef PetscErrorCode (*FCN3)(Vec,Vec,PetscScalar*,void*); /* force argument to next function to not be extern C*/
4755b7f0c42SBarry Smith EXTERN_C_BEGIN
4765b7f0c42SBarry Smith #undef __FUNCT__
4775b7f0c42SBarry Smith #define __FUNCT__ "MatSNESMFSetCheckh_FD"
47863dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetCheckh_FD(Mat J,FCN3 fun,void*ectx)
4795b7f0c42SBarry Smith {
4805b7f0c42SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)J->data;
4815b7f0c42SBarry Smith 
4825b7f0c42SBarry Smith   PetscFunctionBegin;
4835b7f0c42SBarry Smith   ctx->checkh    = fun;
4845b7f0c42SBarry Smith   ctx->checkhctx = ectx;
4855b7f0c42SBarry Smith   PetscFunctionReturn(0);
4865b7f0c42SBarry Smith }
4875b7f0c42SBarry Smith EXTERN_C_END
4885b7f0c42SBarry Smith 
4894a2ae208SSatish Balay #undef __FUNCT__
4907e9d5209SBarry Smith #define __FUNCT__ "MatSNESMFSetFromOptions"
4917e9d5209SBarry Smith /*@
4927e9d5209SBarry Smith    MatSNESMFSetFromOptions - Sets the MatSNESMF options from the command line
4937e9d5209SBarry Smith    parameter.
4947e9d5209SBarry Smith 
4957e9d5209SBarry Smith    Collective on Mat
4967e9d5209SBarry Smith 
4977e9d5209SBarry Smith    Input Parameters:
4987e9d5209SBarry Smith .  mat - the matrix obtained with MatCreateSNESMF()
4997e9d5209SBarry Smith 
5007e9d5209SBarry Smith    Options Database Keys:
501efb30889SBarry Smith +  -snes_mf_type - wp or ds (see MATSNESMF_WP or MATSNESMF_DS)
5027e9d5209SBarry Smith -  -snes_mf_err - square root of estimated relative error in function evaluation
5037e9d5209SBarry Smith -  -snes_mf_period - how often h is recomputed, defaults to 1, everytime
5047e9d5209SBarry Smith 
5057e9d5209SBarry Smith    Level: advanced
5067e9d5209SBarry Smith 
5077e9d5209SBarry Smith .keywords: SNES, matrix-free, parameters
5087e9d5209SBarry Smith 
5097e9d5209SBarry Smith .seealso: MatCreateSNESMF(),MatSNESMFSetHHistory(),
5107e9d5209SBarry Smith           MatSNESMFResetHHistory(), MatSNESMFKSPMonitor()
5117e9d5209SBarry Smith @*/
51263dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetFromOptions(Mat mat)
5137e9d5209SBarry Smith {
5147e9d5209SBarry Smith   MatSNESMFCtx   mfctx = (MatSNESMFCtx)mat->data;
515dfbe8321SBarry Smith   PetscErrorCode ierr;
5167e9d5209SBarry Smith   PetscTruth     flg;
5177e9d5209SBarry Smith   char           ftype[256];
5187e9d5209SBarry Smith 
5197e9d5209SBarry Smith   PetscFunctionBegin;
5207e9d5209SBarry Smith   if (!MatSNESMFRegisterAllCalled) {ierr = MatSNESMFRegisterAll(PETSC_NULL);CHKERRQ(ierr);}
5217e9d5209SBarry Smith 
5227e9d5209SBarry Smith   ierr = PetscOptionsBegin(mfctx->comm,mfctx->prefix,"Set matrix free computation parameters","MatSNESMF");CHKERRQ(ierr);
5237e9d5209SBarry Smith   ierr = PetscOptionsList("-snes_mf_type","Matrix free type","MatSNESMFSetType",MatSNESMPetscFList,mfctx->type_name,ftype,256,&flg);CHKERRQ(ierr);
5247e9d5209SBarry Smith   if (flg) {
5257e9d5209SBarry Smith     ierr = MatSNESMFSetType(mat,ftype);CHKERRQ(ierr);
5267e9d5209SBarry Smith   }
5277e9d5209SBarry Smith 
52887828ca2SBarry Smith   ierr = PetscOptionsReal("-snes_mf_err","set sqrt relative error in function","MatSNESMFSetFunctionError",mfctx->error_rel,&mfctx->error_rel,0);CHKERRQ(ierr);
5297e9d5209SBarry Smith   ierr = PetscOptionsInt("-snes_mf_period","how often h is recomputed","MatSNESMFSetPeriod",mfctx->recomputeperiod,&mfctx->recomputeperiod,0);CHKERRQ(ierr);
5307e9d5209SBarry Smith   if (mfctx->snes) {
5317e9d5209SBarry Smith     ierr = PetscOptionsName("-snes_mf_ksp_monitor","Monitor matrix-free parameters","MatSNESMFKSPMonitor",&flg);CHKERRQ(ierr);
5327e9d5209SBarry Smith     if (flg) {
5337e9d5209SBarry Smith       KSP ksp;
53494b7f48cSBarry Smith       ierr = SNESGetKSP(mfctx->snes,&ksp);CHKERRQ(ierr);
535*a6570f20SBarry Smith       ierr = KSPMonitorSet(ksp,MatSNESMFKSPMonitor,PETSC_NULL,0);CHKERRQ(ierr);
5367e9d5209SBarry Smith     }
5377e9d5209SBarry Smith   }
5385b7f0c42SBarry Smith   ierr = PetscOptionsName("-snes_mf_check_positivity","Insure that U + h*a is nonnegative","MatSNESMFSetCheckh",&flg);CHKERRQ(ierr);
5395b7f0c42SBarry Smith   if (flg) {
5405b7f0c42SBarry Smith     ierr = MatSNESMFSetCheckh(mat,MatSNESMFCheckPositivity,0);CHKERRQ(ierr);
5415b7f0c42SBarry Smith   }
5427e9d5209SBarry Smith   if (mfctx->ops->setfromoptions) {
5437e9d5209SBarry Smith     ierr = (*mfctx->ops->setfromoptions)(mfctx);CHKERRQ(ierr);
5447e9d5209SBarry Smith   }
5457e9d5209SBarry Smith   ierr = PetscOptionsEnd();CHKERRQ(ierr);
5467e9d5209SBarry Smith   PetscFunctionReturn(0);
5477e9d5209SBarry Smith }
5487e9d5209SBarry Smith 
5490bad9183SKris Buschelman /*MC
550fafad747SKris Buschelman   MATMFFD - MATMFFD = "mffd" - A matrix free matrix type.
5510bad9183SKris Buschelman 
5520bad9183SKris Buschelman   Level: advanced
5530bad9183SKris Buschelman 
5548bc8193eSBarry Smith .seealso: MatCreateMF(), MatCreateSNESMF()
5550bad9183SKris Buschelman M*/
556fe93831dSBarry Smith EXTERN_C_BEGIN
5577e9d5209SBarry Smith #undef __FUNCT__
5587e9d5209SBarry Smith #define __FUNCT__ "MatCreate_MFFD"
55963dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatCreate_MFFD(Mat A)
5607e9d5209SBarry Smith {
5617e9d5209SBarry Smith   MatSNESMFCtx mfctx;
562dfbe8321SBarry Smith   PetscErrorCode ierr;
5637e9d5209SBarry Smith 
5647e9d5209SBarry Smith   PetscFunctionBegin;
5656e087cb5SMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
5666e087cb5SMatthew Knepley   ierr = SNESInitializePackage(PETSC_NULL);CHKERRQ(ierr);
5676e087cb5SMatthew Knepley #endif
5686e087cb5SMatthew Knepley 
56952e6d16bSBarry Smith   ierr = PetscHeaderCreate(mfctx,_p_MatSNESMFCtx,struct _MFOps,MATSNESMFCTX_COOKIE,0,"SNESMF",A->comm,MatDestroy_MFFD,MatView_MFFD);CHKERRQ(ierr);
5707e9d5209SBarry Smith   mfctx->sp              = 0;
5717e9d5209SBarry Smith   mfctx->snes            = 0;
57277d8c4bbSBarry Smith   mfctx->error_rel       = PETSC_SQRT_MACHINE_EPSILON;
5737e9d5209SBarry Smith   mfctx->recomputeperiod = 1;
5747e9d5209SBarry Smith   mfctx->count           = 0;
5757e9d5209SBarry Smith   mfctx->currenth        = 0.0;
5767e9d5209SBarry Smith   mfctx->historyh        = PETSC_NULL;
5777e9d5209SBarry Smith   mfctx->ncurrenth       = 0;
5787e9d5209SBarry Smith   mfctx->maxcurrenth     = 0;
5797e9d5209SBarry Smith   mfctx->type_name       = 0;
5807e9d5209SBarry Smith   mfctx->usesnes         = PETSC_FALSE;
5817e9d5209SBarry Smith 
582c5c390f1SBarry Smith   mfctx->vshift          = 0.0;
583c5c390f1SBarry Smith   mfctx->vscale          = 1.0;
584c5c390f1SBarry Smith 
5857e9d5209SBarry Smith   /*
5867e9d5209SBarry Smith      Create the empty data structure to contain compute-h routines.
5877e9d5209SBarry Smith      These will be filled in below from the command line options or
5887e9d5209SBarry Smith      a later call with MatSNESMFSetType() or if that is not called
5898a124369SBarry Smith      then it will default in the first use of MatMult_MFFD()
5907e9d5209SBarry Smith   */
5917e9d5209SBarry Smith   mfctx->ops->compute        = 0;
5927e9d5209SBarry Smith   mfctx->ops->destroy        = 0;
5937e9d5209SBarry Smith   mfctx->ops->view           = 0;
5947e9d5209SBarry Smith   mfctx->ops->setfromoptions = 0;
5957e9d5209SBarry Smith   mfctx->hctx                = 0;
5967e9d5209SBarry Smith 
5977e9d5209SBarry Smith   mfctx->func                = 0;
5987e9d5209SBarry Smith   mfctx->funcctx             = 0;
5997e9d5209SBarry Smith   mfctx->funcvec             = 0;
600ba6a83e5SMatthew Knepley   mfctx->w                   = PETSC_NULL;
6017e9d5209SBarry Smith 
60265df01d8SBarry Smith   A->data                = mfctx;
6037e9d5209SBarry Smith 
6048a124369SBarry Smith   A->ops->mult           = MatMult_MFFD;
6058a124369SBarry Smith   A->ops->destroy        = MatDestroy_MFFD;
6068a124369SBarry Smith   A->ops->view           = MatView_MFFD;
6078a124369SBarry Smith   A->ops->assemblyend    = MatAssemblyEnd_MFFD;
6088a124369SBarry Smith   A->ops->getdiagonal    = MatGetDiagonal_MFFD;
609c5c390f1SBarry Smith   A->ops->scale          = MatScale_MFFD;
610c5c390f1SBarry Smith   A->ops->shift          = MatShift_MFFD;
61165df01d8SBarry Smith   A->ops->setfromoptions = MatSNESMFSetFromOptions;
61232dfb669SBarry Smith   A->assembled = PETSC_TRUE;
6137e9d5209SBarry Smith 
61465df01d8SBarry Smith   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatSNESMFSetBase_C","MatSNESMFSetBase_FD",MatSNESMFSetBase_FD);CHKERRQ(ierr);
615c5c390f1SBarry Smith   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatSNESMFSetFunctioniBase_C","MatSNESMFSetFunctioniBase_FD",MatSNESMFSetFunctioniBase_FD);CHKERRQ(ierr);
61687828ca2SBarry Smith   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatSNESMFSetFunctioni_C","MatSNESMFSetFunctioni_FD",MatSNESMFSetFunctioni_FD);CHKERRQ(ierr);
6175b7f0c42SBarry Smith   ierr = PetscObjectComposeFunctionDynamic((PetscObject)A,"MatSNESMFSetCheckh_C","MatSNESMFSetCheckh_FD",MatSNESMFSetCheckh_FD);CHKERRQ(ierr);
61865df01d8SBarry Smith   mfctx->mat = A;
61917667f90SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)A,MATMFFD);CHKERRQ(ierr);
6207e9d5209SBarry Smith   PetscFunctionReturn(0);
6217e9d5209SBarry Smith }
622fe93831dSBarry Smith EXTERN_C_END
6237e9d5209SBarry Smith 
6247e9d5209SBarry Smith #undef __FUNCT__
6254a2ae208SSatish Balay #define __FUNCT__ "MatCreateMF"
62652baeb72SSatish Balay /*@
6271d1367b7SBarry Smith    MatCreateMF - Creates a matrix-free matrix. See also MatCreateSNESMF()
6281d1367b7SBarry Smith 
6291d1367b7SBarry Smith    Collective on Vec
6301d1367b7SBarry Smith 
6311d1367b7SBarry Smith    Input Parameters:
6321d1367b7SBarry Smith .  x - vector that defines layout of the vectors and matrices
6331d1367b7SBarry Smith 
6341d1367b7SBarry Smith    Output Parameter:
6351d1367b7SBarry Smith .  J - the matrix-free matrix
6361d1367b7SBarry Smith 
6371d1367b7SBarry Smith    Level: advanced
6381d1367b7SBarry Smith 
6391d1367b7SBarry Smith    Notes:
6401d1367b7SBarry Smith    The matrix-free matrix context merely contains the function pointers
6411d1367b7SBarry Smith    and work space for performing finite difference approximations of
6421d1367b7SBarry Smith    Jacobian-vector products, F'(u)*a,
6431d1367b7SBarry Smith 
6441d1367b7SBarry Smith    The default code uses the following approach to compute h
6451d1367b7SBarry Smith 
6461d1367b7SBarry Smith .vb
6471d1367b7SBarry Smith      F'(u)*a = [F(u+h*a) - F(u)]/h where
6481d1367b7SBarry Smith      h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
6491d1367b7SBarry Smith        = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   otherwise
6501d1367b7SBarry Smith  where
6511d1367b7SBarry Smith      error_rel = square root of relative error in function evaluation
6521d1367b7SBarry Smith      umin = minimum iterate parameter
6531d1367b7SBarry Smith .ve
6541d1367b7SBarry Smith 
6551d1367b7SBarry Smith    The user can set the error_rel via MatSNESMFSetFunctionError() and
6561d1367b7SBarry Smith    umin via MatSNESMFDefaultSetUmin(); see the nonlinear solvers chapter
6571d1367b7SBarry Smith    of the users manual for details.
6581d1367b7SBarry Smith 
6591d1367b7SBarry Smith    The user should call MatDestroy() when finished with the matrix-free
6601d1367b7SBarry Smith    matrix context.
6611d1367b7SBarry Smith 
6621d1367b7SBarry Smith    Options Database Keys:
6631d1367b7SBarry Smith +  -snes_mf_err <error_rel> - Sets error_rel
6641d1367b7SBarry Smith .  -snes_mf_unim <umin> - Sets umin (for default PETSc routine that computes h only)
6655b7f0c42SBarry Smith .  -snes_mf_ksp_monitor - KSP monitor routine that prints differencing h
6665b7f0c42SBarry Smith -  -snes_mf_check_positivity
6671d1367b7SBarry Smith 
6681d1367b7SBarry Smith .keywords: default, matrix-free, create, matrix
6691d1367b7SBarry Smith 
6706ce558aeSBarry Smith .seealso: MatDestroy(), MatSNESMFSetFunctionError(), MatSNESMFDefaultSetUmin(), MatSNESMFSetFunction()
6711d1367b7SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(), MatCreateSNESMF(),
672fed8bd04SBarry Smith           MatSNESMFGetH(),MatSNESMFKSPMonitor(), MatSNESMFRegisterDynamic),, MatSNESMFComputeJacobian()
6731d1367b7SBarry Smith 
6741d1367b7SBarry Smith @*/
67563dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatCreateMF(Vec x,Mat *J)
6761d1367b7SBarry Smith {
677a4d4d686SBarry Smith   MPI_Comm       comm;
6786849ba73SBarry Smith   PetscErrorCode ierr;
679a7cc72afSBarry Smith   PetscInt       n,nloc;
680a4d4d686SBarry Smith 
681a4d4d686SBarry Smith   PetscFunctionBegin;
6821d1367b7SBarry Smith   ierr = PetscObjectGetComm((PetscObject)x,&comm);CHKERRQ(ierr);
68365df01d8SBarry Smith   ierr = VecGetSize(x,&n);CHKERRQ(ierr);
68465df01d8SBarry Smith   ierr = VecGetLocalSize(x,&nloc);CHKERRQ(ierr);
685f69a0ea3SMatthew Knepley   ierr = MatCreate(comm,J);CHKERRQ(ierr);
686f69a0ea3SMatthew Knepley   ierr = MatSetSizes(*J,nloc,nloc,n,n);CHKERRQ(ierr);
687e56c5435SBarry Smith   ierr = MatRegisterDynamic(MATMFFD,0,"MatCreate_MFFD",MatCreate_MFFD);CHKERRQ(ierr);
68865df01d8SBarry Smith   ierr = MatSetType(*J,MATMFFD);CHKERRQ(ierr);
6899a6cb015SBarry Smith   PetscFunctionReturn(0);
6909a6cb015SBarry Smith }
6919a6cb015SBarry Smith 
692a4d4d686SBarry Smith 
6934a2ae208SSatish Balay #undef __FUNCT__
6944a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFGetH"
695a4d4d686SBarry Smith /*@
69665f2ba5bSLois Curfman McInnes    MatSNESMFGetH - Gets the last value that was used as the differencing
697a4d4d686SBarry Smith    parameter.
698a4d4d686SBarry Smith 
699a4d4d686SBarry Smith    Not Collective
700a4d4d686SBarry Smith 
701a4d4d686SBarry Smith    Input Parameters:
7025a655dc6SBarry Smith .  mat - the matrix obtained with MatCreateSNESMF()
703a4d4d686SBarry Smith 
704a4d4d686SBarry Smith    Output Paramter:
705a4d4d686SBarry Smith .  h - the differencing step size
706a4d4d686SBarry Smith 
70715091d37SBarry Smith    Level: advanced
70815091d37SBarry Smith 
709a4d4d686SBarry Smith .keywords: SNES, matrix-free, parameters
710a4d4d686SBarry Smith 
7115a655dc6SBarry Smith .seealso: MatCreateSNESMF(),MatSNESMFSetHHistory(),
7125a655dc6SBarry Smith           MatSNESMFResetHHistory(),MatSNESMFKSPMonitor()
713a4d4d686SBarry Smith @*/
71463dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFGetH(Mat mat,PetscScalar *h)
715a4d4d686SBarry Smith {
7167e9d5209SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)mat->data;
717a4d4d686SBarry Smith 
718a4d4d686SBarry Smith   PetscFunctionBegin;
719a4d4d686SBarry Smith   *h = ctx->currenth;
720a4d4d686SBarry Smith   PetscFunctionReturn(0);
721a4d4d686SBarry Smith }
722a4d4d686SBarry Smith 
7234a2ae208SSatish Balay #undef __FUNCT__
7244a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFKSPMonitor"
725906ed7ccSBarry Smith /*@C
726906ed7ccSBarry Smith    MatSNESMFKSPMonitor - A KSP monitor for use with the  PETSc
72765f2ba5bSLois Curfman McInnes                 SNES matrix free routines. Prints the differencing parameter used at
72865f2ba5bSLois Curfman McInnes                 each step.
729906ed7ccSBarry Smith 
730906ed7ccSBarry Smith    Collective on KSP
731906ed7ccSBarry Smith 
732906ed7ccSBarry Smith    Input Parameters:
733906ed7ccSBarry Smith +    ksp - the Krylov solver object
734906ed7ccSBarry Smith .    n  - the current iteration
735906ed7ccSBarry Smith .    rnorm  - the current residual norm (may be preconditioned or not depending on solver and options
736906ed7ccSBarry Smith _    dummy  - unused argument
737906ed7ccSBarry Smith 
738906ed7ccSBarry Smith   Options Database:
739906ed7ccSBarry Smith .   -snes_mf_ksp_monitor - turn this monitor on
740906ed7ccSBarry Smith 
741*a6570f20SBarry Smith    Notes: Use KSPMonitorSet(ksp,MatSNESMFKSPMonitor,PETSC_NULL,PETSC_NULL);
742906ed7ccSBarry Smith 
743*a6570f20SBarry Smith .seealso:  KSPMonitorSet()
744906ed7ccSBarry Smith 
745906ed7ccSBarry Smith @*/
74663dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFKSPMonitor(KSP ksp,PetscInt n,PetscReal rnorm,void *dummy)
747a4d4d686SBarry Smith {
7485a655dc6SBarry Smith   MatSNESMFCtx   ctx;
749dfbe8321SBarry Smith   PetscErrorCode ierr;
750a4d4d686SBarry Smith   Mat            mat;
751a4d4d686SBarry Smith   MPI_Comm       comm;
752a4d4d686SBarry Smith   PetscTruth     nonzeroinitialguess;
753a4d4d686SBarry Smith 
754a4d4d686SBarry Smith   PetscFunctionBegin;
755a4d4d686SBarry Smith   ierr = PetscObjectGetComm((PetscObject)ksp,&comm);CHKERRQ(ierr);
756a4d4d686SBarry Smith   ierr = KSPGetInitialGuessNonzero(ksp,&nonzeroinitialguess);CHKERRQ(ierr);
757906ed7ccSBarry Smith   ierr = KSPGetOperators(ksp,&mat,PETSC_NULL,PETSC_NULL);CHKERRQ(ierr);
7587e9d5209SBarry Smith   ctx  = (MatSNESMFCtx)mat->data;
7597e9d5209SBarry Smith 
760a4d4d686SBarry Smith   if (n > 0 || nonzeroinitialguess) {
761aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX)
762a83599f4SBarry Smith     ierr = PetscPrintf(comm,"%D KSP Residual norm %14.12e h %G + %G i\n",n,rnorm,
763329f5518SBarry Smith                 PetscRealPart(ctx->currenth),PetscImaginaryPart(ctx->currenth));CHKERRQ(ierr);
764a4d4d686SBarry Smith #else
765a83599f4SBarry Smith     ierr = PetscPrintf(comm,"%D KSP Residual norm %14.12e h %G \n",n,rnorm,ctx->currenth);CHKERRQ(ierr);
766a4d4d686SBarry Smith #endif
767a4d4d686SBarry Smith   } else {
76877431f27SBarry Smith     ierr = PetscPrintf(comm,"%D KSP Residual norm %14.12e\n",n,rnorm);CHKERRQ(ierr);
769a4d4d686SBarry Smith   }
770a4d4d686SBarry Smith   PetscFunctionReturn(0);
771a4d4d686SBarry Smith }
772a4d4d686SBarry Smith 
7734a2ae208SSatish Balay #undef __FUNCT__
7744a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFSetFunction"
77585614651SBarry Smith /*@C
77685614651SBarry Smith    MatSNESMFSetFunction - Sets the function used in applying the matrix free.
77785614651SBarry Smith 
77885614651SBarry Smith    Collective on Mat
77985614651SBarry Smith 
78085614651SBarry Smith    Input Parameters:
78185614651SBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
78285614651SBarry Smith .  v   - workspace vector
78385614651SBarry Smith .  func - the function to use
78485614651SBarry Smith -  funcctx - optional function context passed to function
78585614651SBarry Smith 
78685614651SBarry Smith    Level: advanced
78785614651SBarry Smith 
78885614651SBarry Smith    Notes:
78985614651SBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
79085614651SBarry Smith     matrix inside your compute Jacobian routine
79185614651SBarry Smith 
79285614651SBarry Smith     If this is not set then it will use the function set with SNESSetFunction()
79385614651SBarry Smith 
79485614651SBarry Smith .keywords: SNES, matrix-free, function
79585614651SBarry Smith 
79685614651SBarry Smith .seealso: MatCreateSNESMF(),MatSNESMFGetH(),
79785614651SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(),
79885614651SBarry Smith           MatSNESMFKSPMonitor(), SNESetFunction()
79985614651SBarry Smith @*/
80063dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetFunction(Mat mat,Vec v,PetscErrorCode (*func)(SNES,Vec,Vec,void *),void *funcctx)
80185614651SBarry Smith {
8027e9d5209SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)mat->data;
80385614651SBarry Smith 
80485614651SBarry Smith   PetscFunctionBegin;
80585614651SBarry Smith   ctx->func    = func;
80685614651SBarry Smith   ctx->funcctx = funcctx;
80785614651SBarry Smith   ctx->funcvec = v;
80885614651SBarry Smith   PetscFunctionReturn(0);
80985614651SBarry Smith }
81085614651SBarry Smith 
811cf57b110SBarry Smith #undef __FUNCT__
812cf57b110SBarry Smith #define __FUNCT__ "MatSNESMFSetFunctioni"
813cf57b110SBarry Smith /*@C
814cf57b110SBarry Smith    MatSNESMFSetFunctioni - Sets the function for a single component
815cf57b110SBarry Smith 
816cf57b110SBarry Smith    Collective on Mat
817cf57b110SBarry Smith 
818cf57b110SBarry Smith    Input Parameters:
819cf57b110SBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
820cf57b110SBarry Smith -  funci - the function to use
821cf57b110SBarry Smith 
822cf57b110SBarry Smith    Level: advanced
823cf57b110SBarry Smith 
824cf57b110SBarry Smith    Notes:
825cf57b110SBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
826cf57b110SBarry Smith     matrix inside your compute Jacobian routine
827cf57b110SBarry Smith 
828cf57b110SBarry Smith 
829cf57b110SBarry Smith .keywords: SNES, matrix-free, function
830cf57b110SBarry Smith 
831cf57b110SBarry Smith .seealso: MatCreateSNESMF(),MatSNESMFGetH(),
832cf57b110SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(),
833cf57b110SBarry Smith           MatSNESMFKSPMonitor(), SNESetFunction()
834cf57b110SBarry Smith @*/
83563dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetFunctioni(Mat mat,PetscErrorCode (*funci)(PetscInt,Vec,PetscScalar*,void *))
836cf57b110SBarry Smith {
837a7cc72afSBarry Smith   PetscErrorCode ierr,(*f)(Mat,PetscErrorCode (*)(PetscInt,Vec,PetscScalar*,void *));
838cf57b110SBarry Smith 
839cf57b110SBarry Smith   PetscFunctionBegin;
8404482741eSBarry Smith   PetscValidHeaderSpecific(mat,MAT_COOKIE,1);
841c134de8dSSatish Balay   ierr = PetscObjectQueryFunction((PetscObject)mat,"MatSNESMFSetFunctioni_C",(void (**)(void))&f);CHKERRQ(ierr);
84287828ca2SBarry Smith   if (f) {
84387828ca2SBarry Smith     ierr = (*f)(mat,funci);CHKERRQ(ierr);
84487828ca2SBarry Smith   }
845cf57b110SBarry Smith   PetscFunctionReturn(0);
846cf57b110SBarry Smith }
847cf57b110SBarry Smith 
84887828ca2SBarry Smith 
849cf57b110SBarry Smith #undef __FUNCT__
850cf57b110SBarry Smith #define __FUNCT__ "MatSNESMFSetFunctioniBase"
851cf57b110SBarry Smith /*@C
852cf57b110SBarry Smith    MatSNESMFSetFunctioniBase - Sets the base vector for a single component function evaluation
853cf57b110SBarry Smith 
854cf57b110SBarry Smith    Collective on Mat
855cf57b110SBarry Smith 
856cf57b110SBarry Smith    Input Parameters:
857cf57b110SBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
858cf57b110SBarry Smith -  func - the function to use
859cf57b110SBarry Smith 
860cf57b110SBarry Smith    Level: advanced
861cf57b110SBarry Smith 
862cf57b110SBarry Smith    Notes:
863cf57b110SBarry Smith     If you use this you MUST call MatAssemblyBegin()/MatAssemblyEnd() on the matrix free
864cf57b110SBarry Smith     matrix inside your compute Jacobian routine
865cf57b110SBarry Smith 
866cf57b110SBarry Smith 
867cf57b110SBarry Smith .keywords: SNES, matrix-free, function
868cf57b110SBarry Smith 
869cf57b110SBarry Smith .seealso: MatCreateSNESMF(),MatSNESMFGetH(),
870cf57b110SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(),
871cf57b110SBarry Smith           MatSNESMFKSPMonitor(), SNESetFunction()
872cf57b110SBarry Smith @*/
87363dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetFunctioniBase(Mat mat,PetscErrorCode (*func)(Vec,void *))
874cf57b110SBarry Smith {
8756849ba73SBarry Smith   PetscErrorCode ierr,(*f)(Mat,PetscErrorCode (*)(Vec,void *));
876cf57b110SBarry Smith 
877cf57b110SBarry Smith   PetscFunctionBegin;
8784482741eSBarry Smith   PetscValidHeaderSpecific(mat,MAT_COOKIE,1);
879c134de8dSSatish Balay   ierr = PetscObjectQueryFunction((PetscObject)mat,"MatSNESMFSetFunctioniBase_C",(void (**)(void))&f);CHKERRQ(ierr);
88087828ca2SBarry Smith   if (f) {
88187828ca2SBarry Smith     ierr = (*f)(mat,func);CHKERRQ(ierr);
88287828ca2SBarry Smith   }
883cf57b110SBarry Smith   PetscFunctionReturn(0);
884cf57b110SBarry Smith }
885cf57b110SBarry Smith 
88685614651SBarry Smith 
8874a2ae208SSatish Balay #undef __FUNCT__
8884a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFSetPeriod"
889329f5518SBarry Smith /*@
890329f5518SBarry Smith    MatSNESMFSetPeriod - Sets how often h is recomputed, by default it is everytime
891329f5518SBarry Smith 
892329f5518SBarry Smith    Collective on Mat
893329f5518SBarry Smith 
894329f5518SBarry Smith    Input Parameters:
895329f5518SBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
896329f5518SBarry Smith -  period - 1 for everytime, 2 for every second etc
897329f5518SBarry Smith 
898329f5518SBarry Smith    Options Database Keys:
899329f5518SBarry Smith +  -snes_mf_period <period>
900329f5518SBarry Smith 
901329f5518SBarry Smith    Level: advanced
902329f5518SBarry Smith 
903329f5518SBarry Smith 
904329f5518SBarry Smith .keywords: SNES, matrix-free, parameters
905329f5518SBarry Smith 
906329f5518SBarry Smith .seealso: MatCreateSNESMF(),MatSNESMFGetH(),
907329f5518SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(),
908329f5518SBarry Smith           MatSNESMFKSPMonitor()
909329f5518SBarry Smith @*/
91063dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetPeriod(Mat mat,PetscInt period)
911329f5518SBarry Smith {
9127e9d5209SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)mat->data;
913329f5518SBarry Smith 
914329f5518SBarry Smith   PetscFunctionBegin;
915329f5518SBarry Smith   ctx->recomputeperiod = period;
916329f5518SBarry Smith   PetscFunctionReturn(0);
917329f5518SBarry Smith }
918329f5518SBarry Smith 
9194a2ae208SSatish Balay #undef __FUNCT__
9204a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFSetFunctionError"
921a4d4d686SBarry Smith /*@
9225a655dc6SBarry Smith    MatSNESMFSetFunctionError - Sets the error_rel for the approximation of
923a4d4d686SBarry Smith    matrix-vector products using finite differences.
924a4d4d686SBarry Smith 
925a4d4d686SBarry Smith    Collective on Mat
926a4d4d686SBarry Smith 
927a4d4d686SBarry Smith    Input Parameters:
9285a655dc6SBarry Smith +  mat - the matrix free matrix created via MatCreateSNESMF()
9299a6cb015SBarry Smith -  error_rel - relative error (should be set to the square root of
930a4d4d686SBarry Smith                the relative error in the function evaluations)
931a4d4d686SBarry Smith 
93215091d37SBarry Smith    Options Database Keys:
93315091d37SBarry Smith +  -snes_mf_err <error_rel> - Sets error_rel
93415091d37SBarry Smith 
93515091d37SBarry Smith    Level: advanced
93615091d37SBarry Smith 
937a4d4d686SBarry Smith    Notes:
938a4d4d686SBarry Smith    The default matrix-free matrix-vector product routine computes
939a4d4d686SBarry Smith .vb
94065f2ba5bSLois Curfman McInnes      F'(u)*a = [F(u+h*a) - F(u)]/h where
941a4d4d686SBarry Smith      h = error_rel*u'a/||a||^2                        if  |u'a| > umin*||a||_{1}
942a4d4d686SBarry Smith        = error_rel*umin*sign(u'a)*||a||_{1}/||a||^2   else
943a4d4d686SBarry Smith .ve
944a4d4d686SBarry Smith 
945a4d4d686SBarry Smith .keywords: SNES, matrix-free, parameters
946a4d4d686SBarry Smith 
9475a655dc6SBarry Smith .seealso: MatCreateSNESMF(),MatSNESMFGetH(),
9485a655dc6SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(),
9495a655dc6SBarry Smith           MatSNESMFKSPMonitor()
950a4d4d686SBarry Smith @*/
95163dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetFunctionError(Mat mat,PetscReal error)
952a4d4d686SBarry Smith {
9537e9d5209SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)mat->data;
954a4d4d686SBarry Smith 
955a4d4d686SBarry Smith   PetscFunctionBegin;
956a4d4d686SBarry Smith   if (error != PETSC_DEFAULT) ctx->error_rel = error;
957a4d4d686SBarry Smith   PetscFunctionReturn(0);
958a4d4d686SBarry Smith }
959a4d4d686SBarry Smith 
9604a2ae208SSatish Balay #undef __FUNCT__
9614a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFAddNullSpace"
962a4d4d686SBarry Smith /*@
96365f2ba5bSLois Curfman McInnes    MatSNESMFAddNullSpace - Provides a null space that an operator is
96465f2ba5bSLois Curfman McInnes    supposed to have.  Since roundoff will create a small component in
96565f2ba5bSLois Curfman McInnes    the null space, if you know the null space you may have it
96665f2ba5bSLois Curfman McInnes    automatically removed.
967a4d4d686SBarry Smith 
968a4d4d686SBarry Smith    Collective on Mat
969a4d4d686SBarry Smith 
970a4d4d686SBarry Smith    Input Parameters:
971a4d4d686SBarry Smith +  J - the matrix-free matrix context
97274637425SBarry Smith -  nullsp - object created with MatNullSpaceCreate()
973a4d4d686SBarry Smith 
97415091d37SBarry Smith    Level: advanced
97515091d37SBarry Smith 
976a4d4d686SBarry Smith .keywords: SNES, matrix-free, null space
977a4d4d686SBarry Smith 
97874637425SBarry Smith .seealso: MatNullSpaceCreate(), MatSNESMFGetH(), MatCreateSNESMF(),
9795a655dc6SBarry Smith           MatSNESMFSetHHistory(), MatSNESMFResetHHistory(),
9805a655dc6SBarry Smith           MatSNESMFKSPMonitor(), MatSNESMFErrorRel()
981a4d4d686SBarry Smith @*/
98263dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFAddNullSpace(Mat J,MatNullSpace nullsp)
983a4d4d686SBarry Smith {
984dfbe8321SBarry Smith   PetscErrorCode ierr;
9857e9d5209SBarry Smith   MatSNESMFCtx   ctx = (MatSNESMFCtx)J->data;
986a4d4d686SBarry Smith   MPI_Comm       comm;
987a4d4d686SBarry Smith 
988a4d4d686SBarry Smith   PetscFunctionBegin;
9892d0c0e3bSBarry Smith   ierr = PetscObjectGetComm((PetscObject)J,&comm);CHKERRQ(ierr);
990a4d4d686SBarry Smith 
99185614651SBarry Smith   ctx->sp = nullsp;
99285614651SBarry Smith   ierr    = PetscObjectReference((PetscObject)nullsp);CHKERRQ(ierr);
993a4d4d686SBarry Smith   PetscFunctionReturn(0);
994a4d4d686SBarry Smith }
995a4d4d686SBarry Smith 
9964a2ae208SSatish Balay #undef __FUNCT__
9974a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFSetHHistory"
998a4d4d686SBarry Smith /*@
99965f2ba5bSLois Curfman McInnes    MatSNESMFSetHHistory - Sets an array to collect a history of the
100065f2ba5bSLois Curfman McInnes    differencing values (h) computed for the matrix-free product.
1001a4d4d686SBarry Smith 
1002a4d4d686SBarry Smith    Collective on Mat
1003a4d4d686SBarry Smith 
1004a4d4d686SBarry Smith    Input Parameters:
1005a4d4d686SBarry Smith +  J - the matrix-free matrix context
100665f2ba5bSLois Curfman McInnes .  histroy - space to hold the history
100765f2ba5bSLois Curfman McInnes -  nhistory - number of entries in history, if more entries are generated than
100865f2ba5bSLois Curfman McInnes               nhistory, then the later ones are discarded
1009a4d4d686SBarry Smith 
101015091d37SBarry Smith    Level: advanced
101115091d37SBarry Smith 
1012a4d4d686SBarry Smith    Notes:
101365f2ba5bSLois Curfman McInnes    Use MatSNESMFResetHHistory() to reset the history counter and collect
101465f2ba5bSLois Curfman McInnes    a new batch of differencing parameters, h.
1015a4d4d686SBarry Smith 
1016a4d4d686SBarry Smith .keywords: SNES, matrix-free, h history, differencing history
1017a4d4d686SBarry Smith 
10185a655dc6SBarry Smith .seealso: MatSNESMFGetH(), MatCreateSNESMF(),
10195a655dc6SBarry Smith           MatSNESMFResetHHistory(),
10205a655dc6SBarry Smith           MatSNESMFKSPMonitor(), MatSNESMFSetFunctionError()
1021a4d4d686SBarry Smith 
1022a4d4d686SBarry Smith @*/
102363dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetHHistory(Mat J,PetscScalar history[],PetscInt nhistory)
1024a4d4d686SBarry Smith {
10257e9d5209SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)J->data;
1026a4d4d686SBarry Smith 
1027a4d4d686SBarry Smith   PetscFunctionBegin;
1028a4d4d686SBarry Smith   ctx->historyh    = history;
1029a4d4d686SBarry Smith   ctx->maxcurrenth = nhistory;
1030a4d4d686SBarry Smith   ctx->currenth    = 0;
1031a4d4d686SBarry Smith   PetscFunctionReturn(0);
1032a4d4d686SBarry Smith }
1033a4d4d686SBarry Smith 
10344a2ae208SSatish Balay #undef __FUNCT__
10354a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFResetHHistory"
1036a4d4d686SBarry Smith /*@
10375a655dc6SBarry Smith    MatSNESMFResetHHistory - Resets the counter to zero to begin
1038a4d4d686SBarry Smith    collecting a new set of differencing histories.
1039a4d4d686SBarry Smith 
1040a4d4d686SBarry Smith    Collective on Mat
1041a4d4d686SBarry Smith 
1042a4d4d686SBarry Smith    Input Parameters:
1043a4d4d686SBarry Smith .  J - the matrix-free matrix context
1044a4d4d686SBarry Smith 
104515091d37SBarry Smith    Level: advanced
104615091d37SBarry Smith 
1047a4d4d686SBarry Smith    Notes:
104865f2ba5bSLois Curfman McInnes    Use MatSNESMFSetHHistory() to create the original history counter.
1049a4d4d686SBarry Smith 
1050a4d4d686SBarry Smith .keywords: SNES, matrix-free, h history, differencing history
1051a4d4d686SBarry Smith 
10525a655dc6SBarry Smith .seealso: MatSNESMFGetH(), MatCreateSNESMF(),
10535a655dc6SBarry Smith           MatSNESMFSetHHistory(),
10545a655dc6SBarry Smith           MatSNESMFKSPMonitor(), MatSNESMFSetFunctionError()
1055a4d4d686SBarry Smith 
1056a4d4d686SBarry Smith @*/
105763dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFResetHHistory(Mat J)
1058a4d4d686SBarry Smith {
10597e9d5209SBarry Smith   MatSNESMFCtx ctx = (MatSNESMFCtx)J->data;
1060a4d4d686SBarry Smith 
1061a4d4d686SBarry Smith   PetscFunctionBegin;
1062be726c96SBarry Smith   ctx->ncurrenth    = 0;
1063a4d4d686SBarry Smith   PetscFunctionReturn(0);
1064a4d4d686SBarry Smith }
1065a4d4d686SBarry Smith 
10664a2ae208SSatish Balay #undef __FUNCT__
1067fed8bd04SBarry Smith #define __FUNCT__ "MatSNESMFComputeJacobian"
10683960baedSBarry Smith /*@
10693960baedSBarry Smith    MatSNESMFComputeJacobian - Tells the matrix-free Jacobian object the new location at which
10703960baedSBarry Smith        Jacobian matrix vector products will be computed at, i.e. J(x) * a.
10713960baedSBarry Smith 
10723960baedSBarry Smith    Collective on SNES
10733960baedSBarry Smith 
10743960baedSBarry Smith    Input Parameters:
10753960baedSBarry Smith +   snes - the nonlinear solver context
10763960baedSBarry Smith .   x - the point at which the Jacobian vector products will be performed
10773960baedSBarry Smith .   jac - the matrix-free Jacobian object
10783960baedSBarry Smith .   B - either the same as jac or another matrix type (ignored)
10793960baedSBarry Smith .   flag - not relevent for matrix-free form
10803960baedSBarry Smith -   dummy - the user context (ignored)
10813960baedSBarry Smith 
10823960baedSBarry Smith    Level: developer
10833960baedSBarry Smith 
10843960baedSBarry Smith    Notes:
10853960baedSBarry Smith      This can be passed into SNESSetJacobian() when using a completely matrix-free solver,
10863960baedSBarry Smith      that is the B matrix is also the same matrix operator. This is used when you select
10873960baedSBarry Smith      -snes_mf but rarely used directly by users.
10883960baedSBarry Smith 
10893960baedSBarry Smith .seealso: MatSNESMFGetH(), MatCreateSNESMF(),
10903960baedSBarry Smith           MatSNESMFSetHHistory(),
10913960baedSBarry Smith           MatSNESMFKSPMonitor(), MatSNESMFSetFunctionError(), MatSNESMFCreate(), SNESSetJacobian()
10923960baedSBarry Smith 
10933960baedSBarry Smith @*/
109463dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFComputeJacobian(SNES snes,Vec x,Mat *jac,Mat *B,MatStructure *flag,void *dummy)
10951d1367b7SBarry Smith {
1096dfbe8321SBarry Smith   PetscErrorCode ierr;
10971d1367b7SBarry Smith   PetscFunctionBegin;
10981d1367b7SBarry Smith   ierr = MatAssemblyBegin(*jac,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
10991d1367b7SBarry Smith   ierr = MatAssemblyEnd(*jac,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
11001d1367b7SBarry Smith   PetscFunctionReturn(0);
11011d1367b7SBarry Smith }
11021d1367b7SBarry Smith 
11034a2ae208SSatish Balay #undef __FUNCT__
11044a2ae208SSatish Balay #define __FUNCT__ "MatSNESMFSetBase"
11055b7f0c42SBarry Smith /*@
11065b7f0c42SBarry Smith     MatSNESMFSetBase - Sets the vector U at which matrix vector products of the
11075b7f0c42SBarry Smith         Jacobian are computed
11085b7f0c42SBarry Smith 
11095b7f0c42SBarry Smith     Collective on Mat
11105b7f0c42SBarry Smith 
11115b7f0c42SBarry Smith     Input Parameters:
11125b7f0c42SBarry Smith +   J - the MatSNESMF matrix
11135b7f0c42SBarry Smith -   U - the vector
11145b7f0c42SBarry Smith 
11155b7f0c42SBarry Smith     Notes: This is rarely used directly
11165b7f0c42SBarry Smith 
11175b7f0c42SBarry Smith     Level: advanced
11185b7f0c42SBarry Smith 
11195b7f0c42SBarry Smith @*/
112063dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetBase(Mat J,Vec U)
11211d1367b7SBarry Smith {
1122dfbe8321SBarry Smith   PetscErrorCode ierr,(*f)(Mat,Vec);
11231d1367b7SBarry Smith 
11241d1367b7SBarry Smith   PetscFunctionBegin;
11254482741eSBarry Smith   PetscValidHeaderSpecific(J,MAT_COOKIE,1);
11264482741eSBarry Smith   PetscValidHeaderSpecific(U,VEC_COOKIE,2);
1127c134de8dSSatish Balay   ierr = PetscObjectQueryFunction((PetscObject)J,"MatSNESMFSetBase_C",(void (**)(void))&f);CHKERRQ(ierr);
1128cf3bea43SBarry Smith   if (f) {
1129cf3bea43SBarry Smith     ierr = (*f)(J,U);CHKERRQ(ierr);
113049d4803aSBarry Smith   }
11311d1367b7SBarry Smith   PetscFunctionReturn(0);
11321d1367b7SBarry Smith }
1133cf57b110SBarry Smith 
11345b7f0c42SBarry Smith #undef __FUNCT__
11355b7f0c42SBarry Smith #define __FUNCT__ "MatSNESMFSetCheckh"
113661860be5SBarry Smith /*@C
11375b7f0c42SBarry Smith     MatSNESMFSetCheckh - Sets a function that checks the computed h and adjusts
11385b7f0c42SBarry Smith         it to satisfy some criteria
1139cf57b110SBarry Smith 
11405b7f0c42SBarry Smith     Collective on Mat
11415b7f0c42SBarry Smith 
11425b7f0c42SBarry Smith     Input Parameters:
11435b7f0c42SBarry Smith +   J - the MatSNESMF matrix
11445b7f0c42SBarry Smith .   fun - the function that checks h
11455b7f0c42SBarry Smith -   ctx - any context needed by the function
11465b7f0c42SBarry Smith 
11475b7f0c42SBarry Smith     Options Database Keys:
11485b7f0c42SBarry Smith .   -snes_mf_check_positivity
11495b7f0c42SBarry Smith 
11505b7f0c42SBarry Smith     Level: advanced
11515b7f0c42SBarry Smith 
11525b7f0c42SBarry Smith     Notes: For example, MatSNESMFSetCheckPositivity() insures that all entries
11535b7f0c42SBarry Smith        of U + h*a are non-negative
11545b7f0c42SBarry Smith 
11555b7f0c42SBarry Smith .seealso:  MatSNESMFSetCheckPositivity()
11565b7f0c42SBarry Smith @*/
115763dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFSetCheckh(Mat J,PetscErrorCode (*fun)(Vec,Vec,PetscScalar*,void*),void* ctx)
11585b7f0c42SBarry Smith {
11596849ba73SBarry Smith   PetscErrorCode ierr,(*f)(Mat,PetscErrorCode (*)(Vec,Vec,PetscScalar*,void*),void*);
11605b7f0c42SBarry Smith 
11615b7f0c42SBarry Smith   PetscFunctionBegin;
11624482741eSBarry Smith   PetscValidHeaderSpecific(J,MAT_COOKIE,1);
11635b7f0c42SBarry Smith   ierr = PetscObjectQueryFunction((PetscObject)J,"MatSNESMFSetCheckh_C",(void (**)(void))&f);CHKERRQ(ierr);
11645b7f0c42SBarry Smith   if (f) {
11655b7f0c42SBarry Smith     ierr = (*f)(J,fun,ctx);CHKERRQ(ierr);
11665b7f0c42SBarry Smith   }
11675b7f0c42SBarry Smith   PetscFunctionReturn(0);
11685b7f0c42SBarry Smith }
11695b7f0c42SBarry Smith 
11705b7f0c42SBarry Smith #undef __FUNCT__
11715b7f0c42SBarry Smith #define __FUNCT__ "MatSNESMFSetCheckPositivity"
11725b7f0c42SBarry Smith /*@
11735b7f0c42SBarry Smith     MatSNESMFCheckPositivity - Checks that all entries in U + h*a are positive or
11745b7f0c42SBarry Smith         zero, decreases h until this is satisfied.
11755b7f0c42SBarry Smith 
11765b7f0c42SBarry Smith     Collective on Vec
11775b7f0c42SBarry Smith 
11785b7f0c42SBarry Smith     Input Parameters:
11795b7f0c42SBarry Smith +   U - base vector that is added to
11805b7f0c42SBarry Smith .   a - vector that is added
11815b7f0c42SBarry Smith .   h - scaling factor on a
11825b7f0c42SBarry Smith -   dummy - context variable (unused)
11835b7f0c42SBarry Smith 
11845b7f0c42SBarry Smith     Options Database Keys:
11855b7f0c42SBarry Smith .   -snes_mf_check_positivity
11865b7f0c42SBarry Smith 
11875b7f0c42SBarry Smith     Level: advanced
11885b7f0c42SBarry Smith 
11895b7f0c42SBarry Smith     Notes: This is rarely used directly, rather it is passed as an argument to
11905b7f0c42SBarry Smith            MatSNESMFSetCheckh()
11915b7f0c42SBarry Smith 
11925b7f0c42SBarry Smith .seealso:  MatSNESMFSetCheckh()
11935b7f0c42SBarry Smith @*/
119463dd3a1aSKris Buschelman PetscErrorCode PETSCSNES_DLLEXPORT MatSNESMFCheckPositivity(Vec U,Vec a,PetscScalar *h,void *dummy)
11955b7f0c42SBarry Smith {
11965b7f0c42SBarry Smith   PetscReal      val, minval;
11975b7f0c42SBarry Smith   PetscScalar    *u_vec, *a_vec;
1198dfbe8321SBarry Smith   PetscErrorCode ierr;
1199a7cc72afSBarry Smith   PetscInt       i,n;
12005b7f0c42SBarry Smith   MPI_Comm       comm;
12015b7f0c42SBarry Smith 
12025b7f0c42SBarry Smith   PetscFunctionBegin;
12035b7f0c42SBarry Smith   ierr = PetscObjectGetComm((PetscObject)U,&comm);CHKERRQ(ierr);
12045b7f0c42SBarry Smith   ierr = VecGetArray(U,&u_vec);CHKERRQ(ierr);
12055b7f0c42SBarry Smith   ierr = VecGetArray(a,&a_vec);CHKERRQ(ierr);
1206a7cc72afSBarry Smith   ierr = VecGetLocalSize(U,&n);CHKERRQ(ierr);
120761860be5SBarry Smith   minval = PetscAbsScalar(*h*1.01);
1208a7cc72afSBarry Smith   for(i=0;i<n;i++) {
120961860be5SBarry Smith     if (PetscRealPart(u_vec[i] + *h*a_vec[i]) <= 0.0) {
121061860be5SBarry Smith       val = PetscAbsScalar(u_vec[i]/a_vec[i]);
12115b7f0c42SBarry Smith       if (val < minval) minval = val;
12125b7f0c42SBarry Smith     }
12135b7f0c42SBarry Smith   }
12145b7f0c42SBarry Smith   ierr = VecRestoreArray(U,&u_vec);CHKERRQ(ierr);
12155b7f0c42SBarry Smith   ierr = VecRestoreArray(a,&a_vec);CHKERRQ(ierr);
12165b7f0c42SBarry Smith   ierr = PetscGlobalMin(&minval,&val,comm);CHKERRQ(ierr);
121761860be5SBarry Smith   if (val <= PetscAbsScalar(*h)) {
1218ae15b995SBarry Smith     ierr = PetscInfo2(U,"Scaling back h from %G to %G\n",PetscRealPart(*h),.99*val);CHKERRQ(ierr);
121961860be5SBarry Smith     if (PetscRealPart(*h) > 0.0) *h =  0.99*val;
12205b7f0c42SBarry Smith     else                         *h = -0.99*val;
12215b7f0c42SBarry Smith   }
12225b7f0c42SBarry Smith   PetscFunctionReturn(0);
12235b7f0c42SBarry Smith }
1224cf57b110SBarry Smith 
1225cf57b110SBarry Smith 
1226cf57b110SBarry Smith 
1227cf57b110SBarry Smith 
1228cf57b110SBarry Smith 
1229cf57b110SBarry Smith 
1230cf57b110SBarry Smith 
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