1c4762a1bSJed Brown static char help[] = "Solves -Laplacian u - exp(u) = 0, 0 < x < 1 using GPU\n\n"; 2c4762a1bSJed Brown /* 3c4762a1bSJed Brown Same as ex47.c except it also uses the GPU to evaluate the function 4c4762a1bSJed Brown */ 5c4762a1bSJed Brown 6c4762a1bSJed Brown #include <petscdm.h> 7c4762a1bSJed Brown #include <petscdmda.h> 8c4762a1bSJed Brown #include <petscsnes.h> 9c4762a1bSJed Brown 10c4762a1bSJed Brown #include <thrust/device_ptr.h> 11c4762a1bSJed Brown #include <thrust/for_each.h> 12c4762a1bSJed Brown #include <thrust/tuple.h> 13c4762a1bSJed Brown #include <thrust/iterator/constant_iterator.h> 14c4762a1bSJed Brown #include <thrust/iterator/counting_iterator.h> 15c4762a1bSJed Brown #include <thrust/iterator/zip_iterator.h> 16c4762a1bSJed Brown 17c4762a1bSJed Brown extern PetscErrorCode ComputeFunction(SNES, Vec, Vec, void *), ComputeJacobian(SNES, Vec, Mat, Mat, void *); 18c4762a1bSJed Brown PetscBool useCUDA = PETSC_FALSE; 19c4762a1bSJed Brown 20c4762a1bSJed Brown int main(int argc, char **argv) 21c4762a1bSJed Brown { 22c4762a1bSJed Brown SNES snes; 23c4762a1bSJed Brown Vec x, f; 24c4762a1bSJed Brown Mat J; 25c4762a1bSJed Brown DM da; 26c4762a1bSJed Brown char *tmp, typeName[256]; 27c4762a1bSJed Brown PetscBool flg; 28c4762a1bSJed Brown 29327415f7SBarry Smith PetscFunctionBeginUser; 309566063dSJacob Faibussowitsch PetscCall(PetscInitialize(&argc, &argv, (char *)0, help)); 319566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL, NULL, "-dm_vec_type", typeName, sizeof(typeName), &flg)); 32c4762a1bSJed Brown if (flg) { 339566063dSJacob Faibussowitsch PetscCall(PetscStrstr(typeName, "cuda", &tmp)); 34c4762a1bSJed Brown if (tmp) useCUDA = PETSC_TRUE; 35c4762a1bSJed Brown } 36c4762a1bSJed Brown 379566063dSJacob Faibussowitsch PetscCall(DMDACreate1d(PETSC_COMM_WORLD, DM_BOUNDARY_NONE, 8, 1, 1, NULL, &da)); 389566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(da)); 399566063dSJacob Faibussowitsch PetscCall(DMSetUp(da)); 40e09e07f2SBarry Smith PetscCall(DMCreateGlobalVector(da, &x)); 41e09e07f2SBarry Smith PetscCall(VecDuplicate(x, &f)); 429566063dSJacob Faibussowitsch PetscCall(DMCreateMatrix(da, &J)); 43c4762a1bSJed Brown 449566063dSJacob Faibussowitsch PetscCall(SNESCreate(PETSC_COMM_WORLD, &snes)); 459566063dSJacob Faibussowitsch PetscCall(SNESSetFunction(snes, f, ComputeFunction, da)); 469566063dSJacob Faibussowitsch PetscCall(SNESSetJacobian(snes, J, J, ComputeJacobian, da)); 479566063dSJacob Faibussowitsch PetscCall(SNESSetFromOptions(snes)); 489566063dSJacob Faibussowitsch PetscCall(SNESSolve(snes, NULL, x)); 49c4762a1bSJed Brown 509566063dSJacob Faibussowitsch PetscCall(MatDestroy(&J)); 519566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 529566063dSJacob Faibussowitsch PetscCall(VecDestroy(&f)); 539566063dSJacob Faibussowitsch PetscCall(SNESDestroy(&snes)); 549566063dSJacob Faibussowitsch PetscCall(DMDestroy(&da)); 55c4762a1bSJed Brown 569566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 57b122ec5aSJacob Faibussowitsch return 0; 58c4762a1bSJed Brown } 59c4762a1bSJed Brown 60c4762a1bSJed Brown struct ApplyStencil 61c4762a1bSJed Brown { 62c4762a1bSJed Brown template <typename Tuple> 63*11486bccSBarry Smith __host__ __device__ void operator()(Tuple t) 64c4762a1bSJed Brown { 65c4762a1bSJed Brown /* f = (2*x_i - x_(i+1) - x_(i-1))/h - h*exp(x_i) */ 66c4762a1bSJed Brown thrust::get<0>(t) = 1; 67c4762a1bSJed Brown if ((thrust::get<4>(t) > 0) && (thrust::get<4>(t) < thrust::get<5>(t) - 1)) { 6888e3df94SJunchao Zhang thrust::get<0>(t) = (((PetscScalar)2.0) * thrust::get<1>(t) - thrust::get<2>(t) - thrust::get<3>(t)) / (thrust::get<6>(t)) - (thrust::get<6>(t)) * exp(thrust::get<1>(t)); 69c4762a1bSJed Brown } else if (thrust::get<4>(t) == 0) { 70c4762a1bSJed Brown thrust::get<0>(t) = thrust::get<1>(t) / (thrust::get<6>(t)); 71c4762a1bSJed Brown } else if (thrust::get<4>(t) == thrust::get<5>(t) - 1) { 72c4762a1bSJed Brown thrust::get<0>(t) = thrust::get<1>(t) / (thrust::get<6>(t)); 73c4762a1bSJed Brown } 74c4762a1bSJed Brown } 75c4762a1bSJed Brown }; 76c4762a1bSJed Brown 77c4762a1bSJed Brown PetscErrorCode ComputeFunction(SNES snes, Vec x, Vec f, void *ctx) 78c4762a1bSJed Brown { 79c4762a1bSJed Brown PetscInt i, Mx, xs, xm, xstartshift, xendshift, fstart, lsize; 80c4762a1bSJed Brown PetscScalar *xx, *ff, hx; 81c4762a1bSJed Brown DM da = (DM)ctx; 82c4762a1bSJed Brown Vec xlocal; 83c4762a1bSJed Brown PetscMPIInt rank, size; 84c4762a1bSJed Brown MPI_Comm comm; 85c4762a1bSJed Brown PetscScalar const *xarray; 86c4762a1bSJed Brown PetscScalar *farray; 87c4762a1bSJed Brown 889566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(da, PETSC_IGNORE, &Mx, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE)); 89c4762a1bSJed Brown hx = 1.0 / (PetscReal)(Mx - 1); 909566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(da, &xlocal)); 919566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(da, x, INSERT_VALUES, xlocal)); 929566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(da, x, INSERT_VALUES, xlocal)); 93c4762a1bSJed Brown 94c4762a1bSJed Brown if (useCUDA) { 959566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)da, &comm)); 969566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 979566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 9806cf5b03SBarry Smith PetscCall(VecCUDAGetArrayRead(xlocal, &xarray)); 9906cf5b03SBarry Smith PetscCall(VecCUDAGetArrayWrite(f, &farray)); 100c4762a1bSJed Brown if (rank) xstartshift = 1; 101c4762a1bSJed Brown else xstartshift = 0; 102c4762a1bSJed Brown if (rank != size - 1) xendshift = 1; 103c4762a1bSJed Brown else xendshift = 0; 1049566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(f, &fstart, NULL)); 1059566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(x, &lsize)); 106*11486bccSBarry Smith // clang-format off 107c4762a1bSJed Brown try { 108c4762a1bSJed Brown thrust::for_each( 109c4762a1bSJed Brown thrust::make_zip_iterator( 110c4762a1bSJed Brown thrust::make_tuple( 111c4762a1bSJed Brown thrust::device_ptr<PetscScalar>(farray), 112c4762a1bSJed Brown thrust::device_ptr<const PetscScalar>(xarray + xstartshift), 113c4762a1bSJed Brown thrust::device_ptr<const PetscScalar>(xarray + xstartshift + 1), 114c4762a1bSJed Brown thrust::device_ptr<const PetscScalar>(xarray + xstartshift - 1), 115c4762a1bSJed Brown thrust::counting_iterator<int>(fstart), 116c4762a1bSJed Brown thrust::constant_iterator<int>(Mx), 117c4762a1bSJed Brown thrust::constant_iterator<PetscScalar>(hx))), 118c4762a1bSJed Brown thrust::make_zip_iterator( 119c4762a1bSJed Brown thrust::make_tuple( 120c4762a1bSJed Brown thrust::device_ptr<PetscScalar>(farray + lsize), 121c4762a1bSJed Brown thrust::device_ptr<const PetscScalar>(xarray + lsize - xendshift), 122c4762a1bSJed Brown thrust::device_ptr<const PetscScalar>(xarray + lsize - xendshift + 1), 123c4762a1bSJed Brown thrust::device_ptr<const PetscScalar>(xarray + lsize - xendshift - 1), 124c4762a1bSJed Brown thrust::counting_iterator<int>(fstart) + lsize, 125c4762a1bSJed Brown thrust::constant_iterator<int>(Mx), 126c4762a1bSJed Brown thrust::constant_iterator<PetscScalar>(hx))), 127c4762a1bSJed Brown ApplyStencil()); 128c4762a1bSJed Brown } 129*11486bccSBarry Smith // clang-format on 130c4762a1bSJed Brown catch (char *all) { 1319566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Thrust is not working\n")); 132c4762a1bSJed Brown } 1339566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayRead(xlocal, &xarray)); 1349566063dSJacob Faibussowitsch PetscCall(VecCUDARestoreArrayWrite(f, &farray)); 135c4762a1bSJed Brown } else { 1369566063dSJacob Faibussowitsch PetscCall(DMDAVecGetArray(da, xlocal, &xx)); 1379566063dSJacob Faibussowitsch PetscCall(DMDAVecGetArray(da, f, &ff)); 1389566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(da, &xs, NULL, NULL, &xm, NULL, NULL)); 139c4762a1bSJed Brown 140c4762a1bSJed Brown for (i = xs; i < xs + xm; i++) { 141c4762a1bSJed Brown if (i == 0 || i == Mx - 1) ff[i] = xx[i] / hx; 142c4762a1bSJed Brown else ff[i] = (2.0 * xx[i] - xx[i - 1] - xx[i + 1]) / hx - hx * PetscExpScalar(xx[i]); 143c4762a1bSJed Brown } 1449566063dSJacob Faibussowitsch PetscCall(DMDAVecRestoreArray(da, xlocal, &xx)); 1459566063dSJacob Faibussowitsch PetscCall(DMDAVecRestoreArray(da, f, &ff)); 146c4762a1bSJed Brown } 1479566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(da, &xlocal)); 148c4762a1bSJed Brown return 0; 149c4762a1bSJed Brown } 150c4762a1bSJed Brown PetscErrorCode ComputeJacobian(SNES snes, Vec x, Mat J, Mat B, void *ctx) 151c4762a1bSJed Brown { 152c4762a1bSJed Brown DM da = (DM)ctx; 153c4762a1bSJed Brown PetscInt i, Mx, xm, xs; 154c4762a1bSJed Brown PetscScalar hx, *xx; 155c4762a1bSJed Brown Vec xlocal; 156c4762a1bSJed Brown 1579566063dSJacob Faibussowitsch PetscCall(DMDAGetInfo(da, PETSC_IGNORE, &Mx, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE, PETSC_IGNORE)); 158c4762a1bSJed Brown hx = 1.0 / (PetscReal)(Mx - 1); 1599566063dSJacob Faibussowitsch PetscCall(DMGetLocalVector(da, &xlocal)); 1609566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(da, x, INSERT_VALUES, xlocal)); 1619566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(da, x, INSERT_VALUES, xlocal)); 1629566063dSJacob Faibussowitsch PetscCall(DMDAVecGetArray(da, xlocal, &xx)); 1639566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(da, &xs, NULL, NULL, &xm, NULL, NULL)); 164c4762a1bSJed Brown 165c4762a1bSJed Brown for (i = xs; i < xs + xm; i++) { 166c4762a1bSJed Brown if (i == 0 || i == Mx - 1) { 1679566063dSJacob Faibussowitsch PetscCall(MatSetValue(J, i, i, 1.0 / hx, INSERT_VALUES)); 168c4762a1bSJed Brown } else { 1699566063dSJacob Faibussowitsch PetscCall(MatSetValue(J, i, i - 1, -1.0 / hx, INSERT_VALUES)); 1709566063dSJacob Faibussowitsch PetscCall(MatSetValue(J, i, i, 2.0 / hx - hx * PetscExpScalar(xx[i]), INSERT_VALUES)); 1719566063dSJacob Faibussowitsch PetscCall(MatSetValue(J, i, i + 1, -1.0 / hx, INSERT_VALUES)); 172c4762a1bSJed Brown } 173c4762a1bSJed Brown } 1749566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(J, MAT_FINAL_ASSEMBLY)); 1759566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(J, MAT_FINAL_ASSEMBLY)); 1769566063dSJacob Faibussowitsch PetscCall(DMDAVecRestoreArray(da, xlocal, &xx)); 1779566063dSJacob Faibussowitsch PetscCall(DMRestoreLocalVector(da, &xlocal)); 178c4762a1bSJed Brown return 0; 179c4762a1bSJed Brown } 180c4762a1bSJed Brown 181c4762a1bSJed Brown /*TEST 182c4762a1bSJed Brown 183c4762a1bSJed Brown build: 184c4762a1bSJed Brown requires: cuda 185c4762a1bSJed Brown 186499ce956SJunchao Zhang testset: 187499ce956SJunchao Zhang args: -snes_monitor_short -dm_mat_type aijcusparse -dm_vec_type cuda 188499ce956SJunchao Zhang output_file: output/ex47cu_1.out 189c4762a1bSJed Brown test: 190499ce956SJunchao Zhang suffix: 1 191499ce956SJunchao Zhang nsize: 1 192499ce956SJunchao Zhang test: 193499ce956SJunchao Zhang suffix: 2 194499ce956SJunchao Zhang nsize: 2 195c4762a1bSJed Brown 196c4762a1bSJed Brown TEST*/ 197