xref: /petsc/src/snes/tutorials/ex71.c (revision ad540459ab38c4a232710a68077e487eb6627fe2)
1c4762a1bSJed Brown static char help[] = "Poiseuille Flow in 2d and 3d channels with finite elements.\n\
2c4762a1bSJed Brown We solve the Poiseuille flow problem in a rectangular\n\
3c4762a1bSJed Brown domain, using a parallel unstructured mesh (DMPLEX) to discretize it.\n\n\n";
4c4762a1bSJed Brown 
5c4762a1bSJed Brown /*F
6c4762a1bSJed Brown A Poiseuille flow is a steady-state isoviscous Stokes flow in a pipe of constant cross-section. We discretize using the
7c4762a1bSJed Brown finite element method on an unstructured mesh. The weak form equations are
8c4762a1bSJed Brown \begin{align*}
9c4762a1bSJed Brown   < \nabla v, \nu (\nabla u + {\nabla u}^T) > - < \nabla\cdot v, p > + < v, \Delta \hat n >_{\Gamma_o} = 0
10c4762a1bSJed Brown   < q, \nabla\cdot u >                                                                                 = 0
11c4762a1bSJed Brown \end{align*}
12c4762a1bSJed Brown where $\nu$ is the kinematic viscosity, $\Delta$ is the pressure drop per unit length, assuming that pressure is 0 on
13c4762a1bSJed Brown the left edge, and $\Gamma_o$ is the outlet boundary at the right edge of the pipe. The normal velocity will be zero at
14c4762a1bSJed Brown the wall, but we will allow a fixed tangential velocity $u_0$.
15c4762a1bSJed Brown 
16c4762a1bSJed Brown In order to test our global to local basis transformation, we will allow the pipe to be at an angle $\alpha$ to the
17c4762a1bSJed Brown coordinate axes.
18c4762a1bSJed Brown 
19c4762a1bSJed Brown For visualization, use
20c4762a1bSJed Brown 
21c4762a1bSJed Brown   -dm_view hdf5:$PWD/sol.h5 -sol_vec_view hdf5:$PWD/sol.h5::append -exact_vec_view hdf5:$PWD/sol.h5::append
22c4762a1bSJed Brown F*/
23c4762a1bSJed Brown 
24c4762a1bSJed Brown #include <petscdmplex.h>
25c4762a1bSJed Brown #include <petscsnes.h>
26c4762a1bSJed Brown #include <petscds.h>
27c4762a1bSJed Brown #include <petscbag.h>
28c4762a1bSJed Brown 
29c4762a1bSJed Brown typedef struct {
30c4762a1bSJed Brown   PetscReal Delta; /* Pressure drop per unit length */
31c4762a1bSJed Brown   PetscReal nu;    /* Kinematic viscosity */
32c4762a1bSJed Brown   PetscReal u_0;   /* Tangential velocity at the wall */
33c4762a1bSJed Brown   PetscReal alpha; /* Angle of pipe wall to x-axis */
34c4762a1bSJed Brown } Parameter;
35c4762a1bSJed Brown 
36c4762a1bSJed Brown typedef struct {
37c4762a1bSJed Brown   PetscBag bag; /* Holds problem parameters */
38c4762a1bSJed Brown } AppCtx;
39c4762a1bSJed Brown 
40c4762a1bSJed Brown /*
41c4762a1bSJed Brown   In 2D, plane Poiseuille flow has exact solution:
42c4762a1bSJed Brown 
43c4762a1bSJed Brown     u = \Delta/(2 \nu) y (1 - y) + u_0
44c4762a1bSJed Brown     v = 0
45c4762a1bSJed Brown     p = -\Delta x
46c4762a1bSJed Brown     f = 0
47c4762a1bSJed Brown 
48c4762a1bSJed Brown   so that
49c4762a1bSJed Brown 
50c4762a1bSJed Brown     -\nu \Delta u + \nabla p + f = <\Delta, 0> + <-\Delta, 0> + <0, 0> = 0
51c4762a1bSJed Brown     \nabla \cdot u               = 0 + 0                               = 0
52c4762a1bSJed Brown 
53c4762a1bSJed Brown   In 3D we use exact solution:
54c4762a1bSJed Brown 
55c4762a1bSJed Brown     u = \Delta/(4 \nu) (y (1 - y) + z (1 - z)) + u_0
56c4762a1bSJed Brown     v = 0
57c4762a1bSJed Brown     w = 0
58c4762a1bSJed Brown     p = -\Delta x
59c4762a1bSJed Brown     f = 0
60c4762a1bSJed Brown 
61c4762a1bSJed Brown   so that
62c4762a1bSJed Brown 
63c4762a1bSJed Brown     -\nu \Delta u + \nabla p + f = <Delta, 0, 0> + <-Delta, 0, 0> + <0, 0, 0> = 0
64c4762a1bSJed Brown     \nabla \cdot u               = 0 + 0 + 0                                  = 0
65c4762a1bSJed Brown 
66c4762a1bSJed Brown   Note that these functions use coordinates X in the global (rotated) frame
67c4762a1bSJed Brown */
689371c9d4SSatish Balay PetscErrorCode quadratic_u(PetscInt dim, PetscReal time, const PetscReal X[], PetscInt Nf, PetscScalar *u, void *ctx) {
69c4762a1bSJed Brown   Parameter *param = (Parameter *)ctx;
70c4762a1bSJed Brown   PetscReal  Delta = param->Delta;
71c4762a1bSJed Brown   PetscReal  nu    = param->nu;
72c4762a1bSJed Brown   PetscReal  u_0   = param->u_0;
73c4762a1bSJed Brown   PetscReal  fac   = (PetscReal)(dim - 1);
74c4762a1bSJed Brown   PetscInt   d;
75c4762a1bSJed Brown 
76c4762a1bSJed Brown   u[0] = u_0;
77c4762a1bSJed Brown   for (d = 1; d < dim; ++d) u[0] += Delta / (fac * 2.0 * nu) * X[d] * (1.0 - X[d]);
78c4762a1bSJed Brown   for (d = 1; d < dim; ++d) u[d] = 0.0;
79c4762a1bSJed Brown   return 0;
80c4762a1bSJed Brown }
81c4762a1bSJed Brown 
829371c9d4SSatish Balay PetscErrorCode linear_p(PetscInt dim, PetscReal time, const PetscReal X[], PetscInt Nf, PetscScalar *p, void *ctx) {
83c4762a1bSJed Brown   Parameter *param = (Parameter *)ctx;
84c4762a1bSJed Brown   PetscReal  Delta = param->Delta;
85c4762a1bSJed Brown 
86c4762a1bSJed Brown   p[0] = -Delta * X[0];
87c4762a1bSJed Brown   return 0;
88c4762a1bSJed Brown }
89c4762a1bSJed Brown 
909371c9d4SSatish Balay PetscErrorCode wall_velocity(PetscInt dim, PetscReal time, const PetscReal X[], PetscInt Nf, PetscScalar *u, void *ctx) {
91c4762a1bSJed Brown   Parameter *param = (Parameter *)ctx;
92c4762a1bSJed Brown   PetscReal  u_0   = param->u_0;
93c4762a1bSJed Brown   PetscInt   d;
94c4762a1bSJed Brown 
95c4762a1bSJed Brown   u[0] = u_0;
96c4762a1bSJed Brown   for (d = 1; d < dim; ++d) u[d] = 0.0;
97c4762a1bSJed Brown   return 0;
98c4762a1bSJed Brown }
99c4762a1bSJed Brown 
100c4762a1bSJed Brown /* gradU[comp*dim+d] = {u_x, u_y, v_x, v_y} or {u_x, u_y, u_z, v_x, v_y, v_z, w_x, w_y, w_z}
101c4762a1bSJed Brown    u[Ncomp]          = {p} */
1029371c9d4SSatish Balay void f1_u(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f1[]) {
103c4762a1bSJed Brown   const PetscReal nu = PetscRealPart(constants[1]);
104c4762a1bSJed Brown   const PetscInt  Nc = dim;
105c4762a1bSJed Brown   PetscInt        c, d;
106c4762a1bSJed Brown 
107c4762a1bSJed Brown   for (c = 0; c < Nc; ++c) {
108c4762a1bSJed Brown     for (d = 0; d < dim; ++d) {
109c4762a1bSJed Brown       /* f1[c*dim+d] = 0.5*nu*(u_x[c*dim+d] + u_x[d*dim+c]); */
110c4762a1bSJed Brown       f1[c * dim + d] = nu * u_x[c * dim + d];
111c4762a1bSJed Brown     }
112c4762a1bSJed Brown     f1[c * dim + c] -= u[uOff[1]];
113c4762a1bSJed Brown   }
114c4762a1bSJed Brown }
115c4762a1bSJed Brown 
116c4762a1bSJed Brown /* gradU[comp*dim+d] = {u_x, u_y, v_x, v_y} or {u_x, u_y, u_z, v_x, v_y, v_z, w_x, w_y, w_z} */
1179371c9d4SSatish Balay void f0_p(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f0[]) {
118c4762a1bSJed Brown   PetscInt d;
119c4762a1bSJed Brown   for (d = 0, f0[0] = 0.0; d < dim; ++d) f0[0] += u_x[d * dim + d];
120c4762a1bSJed Brown }
121c4762a1bSJed Brown 
122c4762a1bSJed Brown /* Residual functions are in reference coordinates */
1239371c9d4SSatish Balay static void f0_bd_u(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], const PetscReal n[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f0[]) {
124c4762a1bSJed Brown   const PetscReal Delta = PetscRealPart(constants[0]);
125c4762a1bSJed Brown   PetscReal       alpha = PetscRealPart(constants[3]);
126c4762a1bSJed Brown   PetscReal       X     = PetscCosReal(alpha) * x[0] + PetscSinReal(alpha) * x[1];
127c4762a1bSJed Brown   PetscInt        d;
128c4762a1bSJed Brown 
129*ad540459SPierre Jolivet   for (d = 0; d < dim; ++d) f0[d] = -Delta * X * n[d];
130c4762a1bSJed Brown }
131c4762a1bSJed Brown 
132c4762a1bSJed Brown /* < q, \nabla\cdot u >
133c4762a1bSJed Brown    NcompI = 1, NcompJ = dim */
1349371c9d4SSatish Balay void g1_pu(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g1[]) {
135c4762a1bSJed Brown   PetscInt d;
136c4762a1bSJed Brown   for (d = 0; d < dim; ++d) g1[d * dim + d] = 1.0; /* \frac{\partial\phi^{u_d}}{\partial x_d} */
137c4762a1bSJed Brown }
138c4762a1bSJed Brown 
139c4762a1bSJed Brown /* -< \nabla\cdot v, p >
140c4762a1bSJed Brown     NcompI = dim, NcompJ = 1 */
1419371c9d4SSatish Balay void g2_up(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g2[]) {
142c4762a1bSJed Brown   PetscInt d;
143c4762a1bSJed Brown   for (d = 0; d < dim; ++d) g2[d * dim + d] = -1.0; /* \frac{\partial\psi^{u_d}}{\partial x_d} */
144c4762a1bSJed Brown }
145c4762a1bSJed Brown 
146c4762a1bSJed Brown /* < \nabla v, \nabla u + {\nabla u}^T >
147c4762a1bSJed Brown    This just gives \nabla u, give the perdiagonal for the transpose */
1489371c9d4SSatish Balay void g3_uu(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g3[]) {
149c4762a1bSJed Brown   const PetscReal nu = PetscRealPart(constants[1]);
150c4762a1bSJed Brown   const PetscInt  Nc = dim;
151c4762a1bSJed Brown   PetscInt        c, d;
152c4762a1bSJed Brown 
153c4762a1bSJed Brown   for (c = 0; c < Nc; ++c) {
154*ad540459SPierre Jolivet     for (d = 0; d < dim; ++d) g3[((c * Nc + c) * dim + d) * dim + d] = nu;
155c4762a1bSJed Brown   }
156c4762a1bSJed Brown }
157c4762a1bSJed Brown 
1589371c9d4SSatish Balay static PetscErrorCode SetupParameters(AppCtx *user) {
159c4762a1bSJed Brown   PetscBag   bag;
160c4762a1bSJed Brown   Parameter *p;
161c4762a1bSJed Brown 
162c4762a1bSJed Brown   PetscFunctionBeginUser;
163c4762a1bSJed Brown   /* setup PETSc parameter bag */
1649566063dSJacob Faibussowitsch   PetscCall(PetscBagGetData(user->bag, (void **)&p));
1659566063dSJacob Faibussowitsch   PetscCall(PetscBagSetName(user->bag, "par", "Poiseuille flow parameters"));
166c4762a1bSJed Brown   bag = user->bag;
1679566063dSJacob Faibussowitsch   PetscCall(PetscBagRegisterReal(bag, &p->Delta, 1.0, "Delta", "Pressure drop per unit length"));
1689566063dSJacob Faibussowitsch   PetscCall(PetscBagRegisterReal(bag, &p->nu, 1.0, "nu", "Kinematic viscosity"));
1699566063dSJacob Faibussowitsch   PetscCall(PetscBagRegisterReal(bag, &p->u_0, 0.0, "u_0", "Tangential velocity at the wall"));
1709566063dSJacob Faibussowitsch   PetscCall(PetscBagRegisterReal(bag, &p->alpha, 0.0, "alpha", "Angle of pipe wall to x-axis"));
171c4762a1bSJed Brown   PetscFunctionReturn(0);
172c4762a1bSJed Brown }
173c4762a1bSJed Brown 
1749371c9d4SSatish Balay PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm) {
175c4762a1bSJed Brown   PetscFunctionBeginUser;
1769566063dSJacob Faibussowitsch   PetscCall(DMCreate(comm, dm));
1779566063dSJacob Faibussowitsch   PetscCall(DMSetType(*dm, DMPLEX));
1789566063dSJacob Faibussowitsch   PetscCall(DMSetFromOptions(*dm));
179c4762a1bSJed Brown   {
180c4762a1bSJed Brown     Parameter   *param;
181c4762a1bSJed Brown     Vec          coordinates;
182c4762a1bSJed Brown     PetscScalar *coords;
183c4762a1bSJed Brown     PetscReal    alpha;
184c4762a1bSJed Brown     PetscInt     cdim, N, bs, i;
185c4762a1bSJed Brown 
1869566063dSJacob Faibussowitsch     PetscCall(DMGetCoordinateDim(*dm, &cdim));
1879566063dSJacob Faibussowitsch     PetscCall(DMGetCoordinates(*dm, &coordinates));
1889566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(coordinates, &N));
1899566063dSJacob Faibussowitsch     PetscCall(VecGetBlockSize(coordinates, &bs));
19063a3b9bcSJacob Faibussowitsch     PetscCheck(bs == cdim, comm, PETSC_ERR_ARG_WRONG, "Invalid coordinate blocksize %" PetscInt_FMT " != embedding dimension %" PetscInt_FMT, bs, cdim);
1919566063dSJacob Faibussowitsch     PetscCall(VecGetArray(coordinates, &coords));
1929566063dSJacob Faibussowitsch     PetscCall(PetscBagGetData(user->bag, (void **)&param));
193c4762a1bSJed Brown     alpha = param->alpha;
194c4762a1bSJed Brown     for (i = 0; i < N; i += cdim) {
195c4762a1bSJed Brown       PetscScalar x = coords[i + 0];
196c4762a1bSJed Brown       PetscScalar y = coords[i + 1];
197c4762a1bSJed Brown 
198c4762a1bSJed Brown       coords[i + 0] = PetscCosReal(alpha) * x - PetscSinReal(alpha) * y;
199c4762a1bSJed Brown       coords[i + 1] = PetscSinReal(alpha) * x + PetscCosReal(alpha) * y;
200c4762a1bSJed Brown     }
2019566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(coordinates, &coords));
2029566063dSJacob Faibussowitsch     PetscCall(DMSetCoordinates(*dm, coordinates));
203c4762a1bSJed Brown   }
2049566063dSJacob Faibussowitsch   PetscCall(DMViewFromOptions(*dm, NULL, "-dm_view"));
205c4762a1bSJed Brown   PetscFunctionReturn(0);
206c4762a1bSJed Brown }
207c4762a1bSJed Brown 
2089371c9d4SSatish Balay PetscErrorCode SetupProblem(DM dm, AppCtx *user) {
20945480ffeSMatthew G. Knepley   PetscDS       ds;
21045480ffeSMatthew G. Knepley   PetscWeakForm wf;
21145480ffeSMatthew G. Knepley   DMLabel       label;
212c4762a1bSJed Brown   Parameter    *ctx;
21345480ffeSMatthew G. Knepley   PetscInt      id, bd;
214c4762a1bSJed Brown 
215c4762a1bSJed Brown   PetscFunctionBeginUser;
2169566063dSJacob Faibussowitsch   PetscCall(PetscBagGetData(user->bag, (void **)&ctx));
2179566063dSJacob Faibussowitsch   PetscCall(DMGetDS(dm, &ds));
2189566063dSJacob Faibussowitsch   PetscCall(PetscDSSetResidual(ds, 0, NULL, f1_u));
2199566063dSJacob Faibussowitsch   PetscCall(PetscDSSetResidual(ds, 1, f0_p, NULL));
2209566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 0, 0, NULL, NULL, NULL, g3_uu));
2219566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 0, 1, NULL, NULL, g2_up, NULL));
2229566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 1, 0, NULL, g1_pu, NULL, NULL));
22345480ffeSMatthew G. Knepley 
22445480ffeSMatthew G. Knepley   id = 2;
2259566063dSJacob Faibussowitsch   PetscCall(DMGetLabel(dm, "marker", &label));
2269566063dSJacob Faibussowitsch   PetscCall(DMAddBoundary(dm, DM_BC_NATURAL, "right wall", label, 1, &id, 0, 0, NULL, NULL, NULL, ctx, &bd));
2279566063dSJacob Faibussowitsch   PetscCall(PetscDSGetBoundary(ds, bd, &wf, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL));
2289566063dSJacob Faibussowitsch   PetscCall(PetscWeakFormSetIndexBdResidual(wf, label, id, 0, 0, 0, f0_bd_u, 0, NULL));
229c4762a1bSJed Brown   /* Setup constants */
230c4762a1bSJed Brown   {
231c4762a1bSJed Brown     Parameter  *param;
232c4762a1bSJed Brown     PetscScalar constants[4];
233c4762a1bSJed Brown 
2349566063dSJacob Faibussowitsch     PetscCall(PetscBagGetData(user->bag, (void **)&param));
235c4762a1bSJed Brown 
236c4762a1bSJed Brown     constants[0] = param->Delta;
237c4762a1bSJed Brown     constants[1] = param->nu;
238c4762a1bSJed Brown     constants[2] = param->u_0;
239c4762a1bSJed Brown     constants[3] = param->alpha;
2409566063dSJacob Faibussowitsch     PetscCall(PetscDSSetConstants(ds, 4, constants));
241c4762a1bSJed Brown   }
242c4762a1bSJed Brown   /* Setup Boundary Conditions */
243c4762a1bSJed Brown   id = 3;
2449566063dSJacob Faibussowitsch   PetscCall(DMAddBoundary(dm, DM_BC_ESSENTIAL, "top wall", label, 1, &id, 0, 0, NULL, (void (*)(void))wall_velocity, NULL, ctx, NULL));
245c4762a1bSJed Brown   id = 1;
2469566063dSJacob Faibussowitsch   PetscCall(DMAddBoundary(dm, DM_BC_ESSENTIAL, "bottom wall", label, 1, &id, 0, 0, NULL, (void (*)(void))wall_velocity, NULL, ctx, NULL));
247c4762a1bSJed Brown   /* Setup exact solution */
2489566063dSJacob Faibussowitsch   PetscCall(PetscDSSetExactSolution(ds, 0, quadratic_u, ctx));
2499566063dSJacob Faibussowitsch   PetscCall(PetscDSSetExactSolution(ds, 1, linear_p, ctx));
250c4762a1bSJed Brown   PetscFunctionReturn(0);
251c4762a1bSJed Brown }
252c4762a1bSJed Brown 
2539371c9d4SSatish Balay PetscErrorCode SetupDiscretization(DM dm, AppCtx *user) {
254c4762a1bSJed Brown   DM         cdm = dm;
255c4762a1bSJed Brown   PetscFE    fe[2];
256c4762a1bSJed Brown   Parameter *param;
25730602db0SMatthew G. Knepley   PetscBool  simplex;
25830602db0SMatthew G. Knepley   PetscInt   dim;
259c4762a1bSJed Brown   MPI_Comm   comm;
260c4762a1bSJed Brown 
261c4762a1bSJed Brown   PetscFunctionBeginUser;
2629566063dSJacob Faibussowitsch   PetscCall(DMGetDimension(dm, &dim));
2639566063dSJacob Faibussowitsch   PetscCall(DMPlexIsSimplex(dm, &simplex));
2649566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)dm, &comm));
2659566063dSJacob Faibussowitsch   PetscCall(PetscFECreateDefault(comm, dim, dim, simplex, "vel_", PETSC_DEFAULT, &fe[0]));
2669566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)fe[0], "velocity"));
2679566063dSJacob Faibussowitsch   PetscCall(PetscFECreateDefault(comm, dim, 1, simplex, "pres_", PETSC_DEFAULT, &fe[1]));
2689566063dSJacob Faibussowitsch   PetscCall(PetscFECopyQuadrature(fe[0], fe[1]));
2699566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)fe[1], "pressure"));
270c4762a1bSJed Brown   /* Set discretization and boundary conditions for each mesh */
2719566063dSJacob Faibussowitsch   PetscCall(DMSetField(dm, 0, NULL, (PetscObject)fe[0]));
2729566063dSJacob Faibussowitsch   PetscCall(DMSetField(dm, 1, NULL, (PetscObject)fe[1]));
2739566063dSJacob Faibussowitsch   PetscCall(DMCreateDS(dm));
2749566063dSJacob Faibussowitsch   PetscCall(SetupProblem(dm, user));
2759566063dSJacob Faibussowitsch   PetscCall(PetscBagGetData(user->bag, (void **)&param));
276c4762a1bSJed Brown   while (cdm) {
2779566063dSJacob Faibussowitsch     PetscCall(DMCopyDisc(dm, cdm));
2789566063dSJacob Faibussowitsch     PetscCall(DMPlexCreateBasisRotation(cdm, param->alpha, 0.0, 0.0));
2799566063dSJacob Faibussowitsch     PetscCall(DMGetCoarseDM(cdm, &cdm));
280c4762a1bSJed Brown   }
2819566063dSJacob Faibussowitsch   PetscCall(PetscFEDestroy(&fe[0]));
2829566063dSJacob Faibussowitsch   PetscCall(PetscFEDestroy(&fe[1]));
283c4762a1bSJed Brown   PetscFunctionReturn(0);
284c4762a1bSJed Brown }
285c4762a1bSJed Brown 
2869371c9d4SSatish Balay int main(int argc, char **argv) {
287c4762a1bSJed Brown   SNES   snes; /* nonlinear solver */
288c4762a1bSJed Brown   DM     dm;   /* problem definition */
289c4762a1bSJed Brown   Vec    u, r; /* solution and residual */
290c4762a1bSJed Brown   AppCtx user; /* user-defined work context */
291c4762a1bSJed Brown 
292327415f7SBarry Smith   PetscFunctionBeginUser;
2939566063dSJacob Faibussowitsch   PetscCall(PetscInitialize(&argc, &argv, NULL, help));
2949566063dSJacob Faibussowitsch   PetscCall(PetscBagCreate(PETSC_COMM_WORLD, sizeof(Parameter), &user.bag));
2959566063dSJacob Faibussowitsch   PetscCall(SetupParameters(&user));
2969566063dSJacob Faibussowitsch   PetscCall(PetscBagSetFromOptions(user.bag));
2979566063dSJacob Faibussowitsch   PetscCall(SNESCreate(PETSC_COMM_WORLD, &snes));
2989566063dSJacob Faibussowitsch   PetscCall(CreateMesh(PETSC_COMM_WORLD, &user, &dm));
2999566063dSJacob Faibussowitsch   PetscCall(SNESSetDM(snes, dm));
3009566063dSJacob Faibussowitsch   PetscCall(DMSetApplicationContext(dm, &user));
301c4762a1bSJed Brown   /* Setup problem */
3029566063dSJacob Faibussowitsch   PetscCall(SetupDiscretization(dm, &user));
3039566063dSJacob Faibussowitsch   PetscCall(DMPlexCreateClosureIndex(dm, NULL));
304c4762a1bSJed Brown 
3059566063dSJacob Faibussowitsch   PetscCall(DMCreateGlobalVector(dm, &u));
3069566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &r));
307c4762a1bSJed Brown 
3089566063dSJacob Faibussowitsch   PetscCall(DMPlexSetSNESLocalFEM(dm, &user, &user, &user));
309c4762a1bSJed Brown 
3109566063dSJacob Faibussowitsch   PetscCall(SNESSetFromOptions(snes));
311c4762a1bSJed Brown 
312c4762a1bSJed Brown   {
31330602db0SMatthew G. Knepley     PetscDS              ds;
31430602db0SMatthew G. Knepley     PetscSimplePointFunc exactFuncs[2];
315c4762a1bSJed Brown     void                *ctxs[2];
316c4762a1bSJed Brown 
3179566063dSJacob Faibussowitsch     PetscCall(DMGetDS(dm, &ds));
3189566063dSJacob Faibussowitsch     PetscCall(PetscDSGetExactSolution(ds, 0, &exactFuncs[0], &ctxs[0]));
3199566063dSJacob Faibussowitsch     PetscCall(PetscDSGetExactSolution(ds, 1, &exactFuncs[1], &ctxs[1]));
3209566063dSJacob Faibussowitsch     PetscCall(DMProjectFunction(dm, 0.0, exactFuncs, ctxs, INSERT_ALL_VALUES, u));
3219566063dSJacob Faibussowitsch     PetscCall(PetscObjectSetName((PetscObject)u, "Exact Solution"));
3229566063dSJacob Faibussowitsch     PetscCall(VecViewFromOptions(u, NULL, "-exact_vec_view"));
323c4762a1bSJed Brown   }
3249566063dSJacob Faibussowitsch   PetscCall(DMSNESCheckFromOptions(snes, u));
3259566063dSJacob Faibussowitsch   PetscCall(VecSet(u, 0.0));
3269566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)u, "Solution"));
3279566063dSJacob Faibussowitsch   PetscCall(SNESSolve(snes, NULL, u));
3289566063dSJacob Faibussowitsch   PetscCall(VecViewFromOptions(u, NULL, "-sol_vec_view"));
329c4762a1bSJed Brown 
3309566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&u));
3319566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&r));
3329566063dSJacob Faibussowitsch   PetscCall(DMDestroy(&dm));
3339566063dSJacob Faibussowitsch   PetscCall(SNESDestroy(&snes));
3349566063dSJacob Faibussowitsch   PetscCall(PetscBagDestroy(&user.bag));
3359566063dSJacob Faibussowitsch   PetscCall(PetscFinalize());
336b122ec5aSJacob Faibussowitsch   return 0;
337c4762a1bSJed Brown }
338c4762a1bSJed Brown 
339c4762a1bSJed Brown /*TEST
340c4762a1bSJed Brown 
341c4762a1bSJed Brown   # Convergence
342c4762a1bSJed Brown   test:
343c4762a1bSJed Brown     suffix: 2d_quad_q1_p0_conv
344c4762a1bSJed Brown     requires: !single
34530602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -dm_plex_separate_marker -dm_refine 1 \
346c4762a1bSJed Brown       -vel_petscspace_degree 1 -pres_petscspace_degree 0 \
347c4762a1bSJed Brown       -snes_convergence_estimate -convest_num_refine 2 -snes_error_if_not_converged \
348c4762a1bSJed Brown       -ksp_type fgmres -ksp_gmres_restart 10 -ksp_rtol 1.0e-9 -ksp_error_if_not_converged \
349c4762a1bSJed Brown       -pc_type fieldsplit -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full \
350c4762a1bSJed Brown         -fieldsplit_velocity_pc_type lu \
351c4762a1bSJed Brown         -fieldsplit_pressure_ksp_rtol 1e-10 -fieldsplit_pressure_pc_type jacobi
352c4762a1bSJed Brown   test:
353c4762a1bSJed Brown     suffix: 2d_quad_q1_p0_conv_u0
354c4762a1bSJed Brown     requires: !single
35530602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -dm_plex_separate_marker -dm_refine 1 -u_0 0.125 \
356c4762a1bSJed Brown       -vel_petscspace_degree 1 -pres_petscspace_degree 0 \
357c4762a1bSJed Brown       -snes_convergence_estimate -convest_num_refine 2 -snes_error_if_not_converged \
358c4762a1bSJed Brown       -ksp_type fgmres -ksp_gmres_restart 10 -ksp_rtol 1.0e-9 -ksp_error_if_not_converged \
359c4762a1bSJed Brown       -pc_type fieldsplit -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full \
360c4762a1bSJed Brown         -fieldsplit_velocity_pc_type lu \
361c4762a1bSJed Brown         -fieldsplit_pressure_ksp_rtol 1e-10 -fieldsplit_pressure_pc_type jacobi
362c4762a1bSJed Brown   test:
363c4762a1bSJed Brown     suffix: 2d_quad_q1_p0_conv_u0_alpha
364c4762a1bSJed Brown     requires: !single
36530602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -dm_plex_separate_marker -dm_refine 1 -u_0 0.125 -alpha 0.3927 \
366c4762a1bSJed Brown       -vel_petscspace_degree 1 -pres_petscspace_degree 0 \
367c4762a1bSJed Brown       -snes_convergence_estimate -convest_num_refine 2 -snes_error_if_not_converged \
368c4762a1bSJed Brown       -ksp_type fgmres -ksp_gmres_restart 10 -ksp_rtol 1.0e-9 -ksp_error_if_not_converged \
369c4762a1bSJed Brown       -pc_type fieldsplit -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full \
370c4762a1bSJed Brown         -fieldsplit_velocity_pc_type lu \
371c4762a1bSJed Brown         -fieldsplit_pressure_ksp_rtol 1e-10 -fieldsplit_pressure_pc_type jacobi
372c4762a1bSJed Brown   test:
373c4762a1bSJed Brown     suffix: 2d_quad_q1_p0_conv_gmg_vanka
374c4762a1bSJed Brown     requires: !single long_runtime
37530602db0SMatthew G. Knepley     args: -dm_plex_simplex 0 -dm_plex_separate_marker -dm_plex_box_faces 2,2 -dm_refine_hierarchy 1 \
376c4762a1bSJed Brown       -vel_petscspace_degree 1 -pres_petscspace_degree 0 \
377c4762a1bSJed Brown       -snes_convergence_estimate -convest_num_refine 1 -snes_error_if_not_converged \
378c4762a1bSJed Brown       -ksp_type fgmres -ksp_gmres_restart 10 -ksp_rtol 1.0e-9 -ksp_error_if_not_converged \
379c4762a1bSJed Brown       -pc_type fieldsplit -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full \
380c4762a1bSJed Brown         -fieldsplit_velocity_pc_type mg \
381c4762a1bSJed Brown           -fieldsplit_velocity_mg_levels_pc_type patch -fieldsplit_velocity_mg_levels_pc_patch_exclude_subspaces 1 \
382c4762a1bSJed Brown           -fieldsplit_velocity_mg_levels_pc_patch_construct_codim 0 -fieldsplit_velocity_mg_levels_pc_patch_construct_type vanka \
383c4762a1bSJed Brown         -fieldsplit_pressure_ksp_rtol 1e-5 -fieldsplit_pressure_pc_type jacobi
384c4762a1bSJed Brown   test:
385c4762a1bSJed Brown     suffix: 2d_tri_p2_p1_conv
386c4762a1bSJed Brown     requires: triangle !single
387c4762a1bSJed Brown     args: -dm_plex_separate_marker -dm_refine 1 \
388c4762a1bSJed Brown       -vel_petscspace_degree 2 -pres_petscspace_degree 1 \
389c4762a1bSJed Brown       -dmsnes_check .001 -snes_error_if_not_converged \
390c4762a1bSJed Brown       -ksp_type fgmres -ksp_gmres_restart 10 -ksp_rtol 1.0e-9 -ksp_error_if_not_converged \
391c4762a1bSJed Brown       -pc_type fieldsplit -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full \
392c4762a1bSJed Brown         -fieldsplit_velocity_pc_type lu \
393c4762a1bSJed Brown         -fieldsplit_pressure_ksp_rtol 1e-10 -fieldsplit_pressure_pc_type jacobi
394c4762a1bSJed Brown   test:
395c4762a1bSJed Brown     suffix: 2d_tri_p2_p1_conv_u0_alpha
396c4762a1bSJed Brown     requires: triangle !single
397c4762a1bSJed Brown     args: -dm_plex_separate_marker -dm_refine 0 -u_0 0.125 -alpha 0.3927 \
398c4762a1bSJed Brown       -vel_petscspace_degree 2 -pres_petscspace_degree 1 \
399c4762a1bSJed Brown       -dmsnes_check .001 -snes_error_if_not_converged \
400c4762a1bSJed Brown       -ksp_type fgmres -ksp_gmres_restart 10 -ksp_rtol 1.0e-9 -ksp_error_if_not_converged \
401c4762a1bSJed Brown       -pc_type fieldsplit -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full \
402c4762a1bSJed Brown         -fieldsplit_velocity_pc_type lu \
403c4762a1bSJed Brown         -fieldsplit_pressure_ksp_rtol 1e-10 -fieldsplit_pressure_pc_type jacobi
404c4762a1bSJed Brown   test:
405c4762a1bSJed Brown     suffix: 2d_tri_p2_p1_conv_gmg_vcycle
406c4762a1bSJed Brown     requires: triangle !single
40730602db0SMatthew G. Knepley     args: -dm_plex_separate_marker -dm_plex_box_faces 2,2 -dm_refine_hierarchy 1 \
408c4762a1bSJed Brown       -vel_petscspace_degree 2 -pres_petscspace_degree 1 \
409c4762a1bSJed Brown       -dmsnes_check .001 -snes_error_if_not_converged \
410c4762a1bSJed Brown       -ksp_type fgmres -ksp_gmres_restart 10 -ksp_rtol 1.0e-9 -ksp_error_if_not_converged \
411c4762a1bSJed Brown       -pc_type fieldsplit -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full \
412c4762a1bSJed Brown         -fieldsplit_velocity_pc_type mg \
413c4762a1bSJed Brown         -fieldsplit_pressure_ksp_rtol 1e-10 -fieldsplit_pressure_pc_type jacobi
414c4762a1bSJed Brown TEST*/
415