16cab3a1bSJed Brown #include <petscdmda.h> /*I "petscdmda.h" I*/ 2b45d2f2cSJed Brown #include <petsc-private/dmimpl.h> 3b45d2f2cSJed Brown #include <petsc-private/snesimpl.h> /*I "petscsnes.h" I*/ 46cab3a1bSJed Brown 56cab3a1bSJed Brown /* This structure holds the user-provided DMDA callbacks */ 66cab3a1bSJed Brown typedef struct { 76cab3a1bSJed Brown PetscErrorCode (*residuallocal)(DMDALocalInfo*,void*,void*,void*); 86cab3a1bSJed Brown PetscErrorCode (*jacobianlocal)(DMDALocalInfo*,void*,Mat,Mat,MatStructure*,void*); 96cab3a1bSJed Brown void *residuallocalctx; 106cab3a1bSJed Brown void *jacobianlocalctx; 116cab3a1bSJed Brown } DM_DA_SNES; 126cab3a1bSJed Brown 136cab3a1bSJed Brown #undef __FUNCT__ 146cab3a1bSJed Brown #define __FUNCT__ "SNESDMDestroy_DMDA" 156cab3a1bSJed Brown static PetscErrorCode SNESDMDestroy_DMDA(SNESDM sdm) 166cab3a1bSJed Brown { 176cab3a1bSJed Brown PetscErrorCode ierr; 186cab3a1bSJed Brown 196cab3a1bSJed Brown PetscFunctionBegin; 206cab3a1bSJed Brown ierr = PetscFree(sdm->data);CHKERRQ(ierr); 216cab3a1bSJed Brown PetscFunctionReturn(0); 226cab3a1bSJed Brown } 236cab3a1bSJed Brown 246cab3a1bSJed Brown #undef __FUNCT__ 256cab3a1bSJed Brown #define __FUNCT__ "DMDASNESGetContext" 266cab3a1bSJed Brown static PetscErrorCode DMDASNESGetContext(DM dm,SNESDM sdm,DM_DA_SNES **dmdasnes) 276cab3a1bSJed Brown { 286cab3a1bSJed Brown PetscErrorCode ierr; 296cab3a1bSJed Brown 306cab3a1bSJed Brown PetscFunctionBegin; 31*b8d0cc33SJed Brown *dmdasnes = PETSC_NULL; 326cab3a1bSJed Brown if (!sdm->data) { 336cab3a1bSJed Brown ierr = PetscNewLog(dm,DM_DA_SNES,&sdm->data);CHKERRQ(ierr); 346cab3a1bSJed Brown sdm->destroy = SNESDMDestroy_DMDA; 356cab3a1bSJed Brown } 366cab3a1bSJed Brown *dmdasnes = (DM_DA_SNES*)sdm->data; 376cab3a1bSJed Brown PetscFunctionReturn(0); 386cab3a1bSJed Brown } 396cab3a1bSJed Brown 406cab3a1bSJed Brown #undef __FUNCT__ 416cab3a1bSJed Brown #define __FUNCT__ "SNESComputeFunction_DMDA" 426cab3a1bSJed Brown /* 436cab3a1bSJed Brown This function should eventually replace: 446cab3a1bSJed Brown DMDAComputeFunction() and DMDAComputeFunction1() 456cab3a1bSJed Brown */ 466cab3a1bSJed Brown static PetscErrorCode SNESComputeFunction_DMDA(SNES snes,Vec X,Vec F,void *ctx) 476cab3a1bSJed Brown { 486cab3a1bSJed Brown PetscErrorCode ierr; 496cab3a1bSJed Brown DM dm; 506cab3a1bSJed Brown DM_DA_SNES *dmdasnes = (DM_DA_SNES*)ctx; 516cab3a1bSJed Brown DMDALocalInfo info; 526cab3a1bSJed Brown Vec Xloc; 536cab3a1bSJed Brown void *x,*f; 546cab3a1bSJed Brown 556cab3a1bSJed Brown PetscFunctionBegin; 562961e153SJed Brown PetscValidHeaderSpecific(snes,SNES_CLASSID,1); 572961e153SJed Brown PetscValidHeaderSpecific(X,VEC_CLASSID,2); 582961e153SJed Brown PetscValidHeaderSpecific(F,VEC_CLASSID,3); 596cab3a1bSJed Brown if (!dmdasnes->residuallocal) SETERRQ(((PetscObject)snes)->comm,PETSC_ERR_PLIB,"Corrupt context"); 606cab3a1bSJed Brown ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 616cab3a1bSJed Brown ierr = DMGetLocalVector(dm,&Xloc);CHKERRQ(ierr); 626cab3a1bSJed Brown ierr = DMGlobalToLocalBegin(dm,X,INSERT_VALUES,Xloc);CHKERRQ(ierr); 636cab3a1bSJed Brown ierr = DMGlobalToLocalEnd(dm,X,INSERT_VALUES,Xloc);CHKERRQ(ierr); 646cab3a1bSJed Brown ierr = DMDAGetLocalInfo(dm,&info);CHKERRQ(ierr); 656cab3a1bSJed Brown ierr = DMDAVecGetArray(dm,Xloc,&x);CHKERRQ(ierr); 666cab3a1bSJed Brown ierr = DMDAVecGetArray(dm,F,&f);CHKERRQ(ierr); 676cab3a1bSJed Brown CHKMEMQ; 686cab3a1bSJed Brown ierr = (*dmdasnes->residuallocal)(&info,x,f,dmdasnes->residuallocalctx);CHKERRQ(ierr); 696cab3a1bSJed Brown CHKMEMQ; 706cab3a1bSJed Brown ierr = DMDAVecRestoreArray(dm,Xloc,&x);CHKERRQ(ierr); 716cab3a1bSJed Brown ierr = DMDAVecRestoreArray(dm,F,&f);CHKERRQ(ierr); 726cab3a1bSJed Brown ierr = DMRestoreLocalVector(dm,&Xloc);CHKERRQ(ierr); 736cab3a1bSJed Brown PetscFunctionReturn(0); 746cab3a1bSJed Brown } 756cab3a1bSJed Brown 766cab3a1bSJed Brown #undef __FUNCT__ 772961e153SJed Brown #define __FUNCT__ "SNESComputeJacobian_DMDA" 782961e153SJed Brown /* 792961e153SJed Brown This function should eventually replace: 802961e153SJed Brown DMComputeJacobian() and DMDAComputeJacobian1() 812961e153SJed Brown */ 822961e153SJed Brown static PetscErrorCode SNESComputeJacobian_DMDA(SNES snes,Vec X,Mat *A,Mat *B,MatStructure *mstr,void *ctx) 832961e153SJed Brown { 842961e153SJed Brown PetscErrorCode ierr; 852961e153SJed Brown DM dm; 862961e153SJed Brown DM_DA_SNES *dmdasnes = (DM_DA_SNES*)ctx; 872961e153SJed Brown DMDALocalInfo info; 882961e153SJed Brown Vec Xloc; 892961e153SJed Brown void *x; 902961e153SJed Brown 912961e153SJed Brown PetscFunctionBegin; 922961e153SJed Brown if (!dmdasnes->residuallocal) SETERRQ(((PetscObject)snes)->comm,PETSC_ERR_PLIB,"Corrupt context"); 932961e153SJed Brown ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 942961e153SJed Brown 952961e153SJed Brown if (dmdasnes->jacobianlocal) { 962961e153SJed Brown ierr = DMGetLocalVector(dm,&Xloc);CHKERRQ(ierr); 972961e153SJed Brown ierr = DMGlobalToLocalBegin(dm,X,INSERT_VALUES,Xloc);CHKERRQ(ierr); 982961e153SJed Brown ierr = DMGlobalToLocalEnd(dm,X,INSERT_VALUES,Xloc);CHKERRQ(ierr); 992961e153SJed Brown ierr = DMDAGetLocalInfo(dm,&info);CHKERRQ(ierr); 1002961e153SJed Brown ierr = DMDAVecGetArray(dm,Xloc,&x);CHKERRQ(ierr); 1012961e153SJed Brown CHKMEMQ; 1022961e153SJed Brown ierr = (*dmdasnes->jacobianlocal)(&info,x,*A,*B,mstr,dmdasnes->jacobianlocalctx);CHKERRQ(ierr); 1032961e153SJed Brown CHKMEMQ; 1042961e153SJed Brown ierr = DMDAVecRestoreArray(dm,Xloc,&x);CHKERRQ(ierr); 1052961e153SJed Brown ierr = DMRestoreLocalVector(dm,&Xloc);CHKERRQ(ierr); 1062961e153SJed Brown } else { 1072961e153SJed Brown MatFDColoring fdcoloring; 1082961e153SJed Brown ierr = PetscObjectQuery((PetscObject)dm,"DMDASNES_FDCOLORING",(PetscObject*)&fdcoloring);CHKERRQ(ierr); 1092961e153SJed Brown if (!fdcoloring) { 1102961e153SJed Brown ISColoring coloring; 1112961e153SJed Brown 1122961e153SJed Brown ierr = DMCreateColoring(dm,dm->coloringtype,MATAIJ,&coloring);CHKERRQ(ierr); 1132961e153SJed Brown ierr = MatFDColoringCreate(*B,coloring,&fdcoloring);CHKERRQ(ierr); 1142961e153SJed Brown ierr = ISColoringDestroy(&coloring);CHKERRQ(ierr); 1152961e153SJed Brown switch (dm->coloringtype) { 1162961e153SJed Brown case IS_COLORING_GLOBAL: 1172961e153SJed Brown ierr = MatFDColoringSetFunction(fdcoloring,(PetscErrorCode(*)(void))SNESComputeFunction_DMDA,dmdasnes);CHKERRQ(ierr); 1182961e153SJed Brown break; 1192961e153SJed Brown default: SETERRQ1(((PetscObject)snes)->comm,PETSC_ERR_SUP,"No support for coloring type '%s'",ISColoringTypes[dm->coloringtype]); 1202961e153SJed Brown } 1212961e153SJed Brown ierr = PetscObjectSetOptionsPrefix((PetscObject)fdcoloring,((PetscObject)dm)->prefix);CHKERRQ(ierr); 1222961e153SJed Brown ierr = MatFDColoringSetFromOptions(fdcoloring);CHKERRQ(ierr); 1232961e153SJed Brown ierr = PetscObjectCompose((PetscObject)dm,"DMDASNES_FDCOLORING",(PetscObject)fdcoloring);CHKERRQ(ierr); 1242961e153SJed Brown ierr = PetscObjectDereference((PetscObject)fdcoloring);CHKERRQ(ierr); 1252961e153SJed Brown 1262961e153SJed Brown /* The following breaks an ugly reference counting loop that deserves a paragraph. MatFDColoringApply() will call 1272961e153SJed Brown * VecDuplicate() with the state Vec and store inside the MatFDColoring. This Vec will duplicate the Vec, but the 1282961e153SJed Brown * MatFDColoring is composed with the DM. We dereference the DM here so that the reference count will eventually 1292961e153SJed Brown * drop to 0. Note the code in DMDestroy() that exits early for a negative reference count. That code path will be 1302961e153SJed Brown * taken when the PetscOList for the Vec inside MatFDColoring is destroyed. 1312961e153SJed Brown */ 1322961e153SJed Brown ierr = PetscObjectDereference((PetscObject)dm);CHKERRQ(ierr); 1332961e153SJed Brown } 1342961e153SJed Brown *mstr = SAME_NONZERO_PATTERN; 1352961e153SJed Brown ierr = MatFDColoringApply(*B,fdcoloring,X,mstr,snes);CHKERRQ(ierr); 1362961e153SJed Brown } 1372961e153SJed Brown /* This will be redundant if the user called both, but it's too common to forget. */ 1382961e153SJed Brown if (*A != *B) { 1392961e153SJed Brown ierr = MatAssemblyBegin(*A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1402961e153SJed Brown ierr = MatAssemblyEnd(*A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1412961e153SJed Brown } 1422961e153SJed Brown PetscFunctionReturn(0); 1432961e153SJed Brown } 1442961e153SJed Brown 1452961e153SJed Brown #undef __FUNCT__ 1466cab3a1bSJed Brown #define __FUNCT__ "DMDASNESSetFunctionLocal" 1476cab3a1bSJed Brown /*@C 1486cab3a1bSJed Brown DMDASNESSetFunctionLocal - set a local residual evaluation function 1496cab3a1bSJed Brown 1506cab3a1bSJed Brown Logically Collective 1516cab3a1bSJed Brown 1526cab3a1bSJed Brown Input Arguments: 1536cab3a1bSJed Brown + dm - DM to associate callback with 1546cab3a1bSJed Brown . func - local residual evaluation 1556cab3a1bSJed Brown - ctx - optional context for local residual evaluation 1566cab3a1bSJed Brown 1576cab3a1bSJed Brown Calling sequence for func: 1586cab3a1bSJed Brown + info - DMDALocalInfo defining the subdomain to evaluate the residual on 1596cab3a1bSJed Brown . x - dimensional pointer to state at which to evaluate residual 1606cab3a1bSJed Brown . f - dimensional pointer to residual, write the residual here 1616cab3a1bSJed Brown - ctx - optional context passed above 1626cab3a1bSJed Brown 1636cab3a1bSJed Brown Level: beginner 1646cab3a1bSJed Brown 1656cab3a1bSJed Brown .seealso: DMSNESSetFunction(), DMDASNESSetJacobian(), DMDACreate1d(), DMDACreate2d(), DMDACreate3d() 1666cab3a1bSJed Brown @*/ 1676cab3a1bSJed Brown PetscErrorCode DMDASNESSetFunctionLocal(DM dm,PetscErrorCode (*func)(DMDALocalInfo*,void*,void*,void*),void *ctx) 1686cab3a1bSJed Brown { 1696cab3a1bSJed Brown PetscErrorCode ierr; 1706cab3a1bSJed Brown SNESDM sdm; 1716cab3a1bSJed Brown DM_DA_SNES *dmdasnes; 1726cab3a1bSJed Brown 1736cab3a1bSJed Brown PetscFunctionBegin; 1746cab3a1bSJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 1756cab3a1bSJed Brown ierr = DMSNESGetContext(dm,&sdm);CHKERRQ(ierr); 1766cab3a1bSJed Brown ierr = DMDASNESGetContext(dm,sdm,&dmdasnes);CHKERRQ(ierr); 1776cab3a1bSJed Brown dmdasnes->residuallocal = func; 1786cab3a1bSJed Brown dmdasnes->residuallocalctx = ctx; 1796cab3a1bSJed Brown ierr = DMSNESSetFunction(dm,SNESComputeFunction_DMDA,dmdasnes);CHKERRQ(ierr); 1802961e153SJed Brown if (!sdm->computejacobian) { /* Call us for the Jacobian too, can be overridden by the user. */ 1812961e153SJed Brown ierr = DMSNESSetJacobian(dm,SNESComputeJacobian_DMDA,dmdasnes);CHKERRQ(ierr); 1822961e153SJed Brown } 1832961e153SJed Brown PetscFunctionReturn(0); 1842961e153SJed Brown } 1852961e153SJed Brown 1862961e153SJed Brown #undef __FUNCT__ 1872961e153SJed Brown #define __FUNCT__ "DMDASNESSetJacobianLocal" 1882961e153SJed Brown /*@C 1892961e153SJed Brown DMDASNESSetJacobianLocal - set a local residual evaluation function 1902961e153SJed Brown 1912961e153SJed Brown Logically Collective 1922961e153SJed Brown 1932961e153SJed Brown Input Arguments: 1942961e153SJed Brown + dm - DM to associate callback with 1952961e153SJed Brown . func - local residual evaluation 1962961e153SJed Brown - ctx - optional context for local residual evaluation 1972961e153SJed Brown 1982961e153SJed Brown Calling sequence for func: 1992961e153SJed Brown + info - DMDALocalInfo defining the subdomain to evaluate the residual on 2002961e153SJed Brown . x - dimensional pointer to state at which to evaluate residual 2012961e153SJed Brown . f - dimensional pointer to residual, write the residual here 2022961e153SJed Brown - ctx - optional context passed above 2032961e153SJed Brown 2042961e153SJed Brown Level: beginner 2052961e153SJed Brown 2062961e153SJed Brown .seealso: DMSNESSetJacobian(), DMDASNESSetJacobian(), DMDACreate1d(), DMDACreate2d(), DMDACreate3d() 2072961e153SJed Brown @*/ 2082961e153SJed Brown PetscErrorCode DMDASNESSetJacobianLocal(DM dm,PetscErrorCode (*func)(DMDALocalInfo*,void*,Mat,Mat,MatStructure*,void*),void *ctx) 2092961e153SJed Brown { 2102961e153SJed Brown PetscErrorCode ierr; 2112961e153SJed Brown SNESDM sdm; 2122961e153SJed Brown DM_DA_SNES *dmdasnes; 2132961e153SJed Brown 2142961e153SJed Brown PetscFunctionBegin; 2152961e153SJed Brown PetscValidHeaderSpecific(dm,DM_CLASSID,1); 2162961e153SJed Brown ierr = DMSNESGetContext(dm,&sdm);CHKERRQ(ierr); 2172961e153SJed Brown ierr = DMDASNESGetContext(dm,sdm,&dmdasnes);CHKERRQ(ierr); 2182961e153SJed Brown dmdasnes->jacobianlocal = func; 2192961e153SJed Brown dmdasnes->jacobianlocalctx = ctx; 2202961e153SJed Brown ierr = DMSNESSetJacobian(dm,SNESComputeJacobian_DMDA,dmdasnes);CHKERRQ(ierr); 2216cab3a1bSJed Brown PetscFunctionReturn(0); 2226cab3a1bSJed Brown } 223