15c6c1daeSBarry Smith 29bb5e83dSBarry Smith #include <petsc-private/bagimpl.h> /*I "petscbag.h" I*/ 3665c2dedSJed Brown #include <petscviewer.h> 45c6c1daeSBarry Smith 55c6c1daeSBarry Smith #undef __FUNCT__ 65c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegister_Private" 75c6c1daeSBarry Smith /* 85c6c1daeSBarry Smith Adds item to the linked list in a bag 95c6c1daeSBarry Smith */ 105c6c1daeSBarry Smith static PetscErrorCode PetscBagRegister_Private(PetscBag bag,PetscBagItem item,const char *name,const char *help) 115c6c1daeSBarry Smith { 125c6c1daeSBarry Smith PetscErrorCode ierr; 135c6c1daeSBarry Smith 145c6c1daeSBarry Smith PetscFunctionBegin; 155c6c1daeSBarry Smith ierr = PetscStrncpy(item->name,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 165c6c1daeSBarry Smith ierr = PetscStrncpy(item->help,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr); 175c6c1daeSBarry Smith if (!bag->bagitems) bag->bagitems = item; 185c6c1daeSBarry Smith else { 195c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 205c6c1daeSBarry Smith while (nitem->next) { 215c6c1daeSBarry Smith nitem = nitem->next; 225c6c1daeSBarry Smith } 235c6c1daeSBarry Smith nitem->next = item; 245c6c1daeSBarry Smith } 255c6c1daeSBarry Smith bag->count++; 265c6c1daeSBarry Smith PetscFunctionReturn(0); 275c6c1daeSBarry Smith } 285c6c1daeSBarry Smith 295c6c1daeSBarry Smith #undef __FUNCT__ 305c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterEnum" 315c6c1daeSBarry Smith /*@C 325c6c1daeSBarry Smith PetscBagRegisterEnum - add an enum value to the bag 335c6c1daeSBarry Smith 345c6c1daeSBarry Smith Logically Collective on PetscBag 355c6c1daeSBarry Smith 365c6c1daeSBarry Smith Input Parameter: 375c6c1daeSBarry Smith + bag - the bag of values 385c6c1daeSBarry Smith . addr - location of enum in struct 395c6c1daeSBarry Smith . mdefault - the initial value 405c6c1daeSBarry Smith . list - array of strings containing names of enum values followed by enum name followed by enum prefix 415c6c1daeSBarry Smith - help - longer string with more information about the value 425c6c1daeSBarry Smith 435c6c1daeSBarry Smith Level: beginner 445c6c1daeSBarry Smith 455c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 465c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 475c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName() 485c6c1daeSBarry Smith 495c6c1daeSBarry Smith @*/ 505c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterEnum(PetscBag bag,void *addr,const char *const *list,PetscEnum mdefault, const char *name, const char *help) 515c6c1daeSBarry Smith { 525c6c1daeSBarry Smith PetscErrorCode ierr; 535c6c1daeSBarry Smith PetscBagItem item; 545c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 555c6c1daeSBarry Smith PetscBool printhelp; 565c6c1daeSBarry Smith PetscInt i = 0; 575c6c1daeSBarry Smith 585c6c1daeSBarry Smith PetscFunctionBegin; 595c6c1daeSBarry Smith nname[0] = '-'; 605c6c1daeSBarry Smith nname[1] = 0; 615c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 620298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 635c6c1daeSBarry Smith if (printhelp) { 645c6c1daeSBarry Smith while (list[i++]) ; 655c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: (%s) %s (choose one of) ",bag->bagprefix ? bag->bagprefix : "",name,list[mdefault],list[i-3],help);CHKERRQ(ierr); 665c6c1daeSBarry Smith for (i=0; list[i+2]; i++) { 675c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," %s",list[i]);CHKERRQ(ierr); 685c6c1daeSBarry Smith } 695c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,"\n");CHKERRQ(ierr); 705c6c1daeSBarry Smith } 710298fd71SBarry Smith ierr = PetscOptionsGetEnum(bag->bagprefix,nname,list,&mdefault,NULL);CHKERRQ(ierr); 725c6c1daeSBarry Smith 73b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 745c6c1daeSBarry Smith item->dtype = PETSC_ENUM; 755c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 765c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 775c6c1daeSBarry Smith item->next = 0; 785c6c1daeSBarry Smith item->msize = 1; 795c6c1daeSBarry Smith ierr = PetscStrArrayallocpy(list,(char***)&item->list);CHKERRQ(ierr); 805c6c1daeSBarry Smith *(PetscEnum*)addr = mdefault; 815c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 825c6c1daeSBarry Smith PetscFunctionReturn(0); 835c6c1daeSBarry Smith } 845c6c1daeSBarry Smith 855c6c1daeSBarry Smith #undef __FUNCT__ 865c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterIntArray" 875c6c1daeSBarry Smith /*@C 885c6c1daeSBarry Smith PetscBagRegisterIntArray - add an integer value to the bag 895c6c1daeSBarry Smith 905c6c1daeSBarry Smith Logically Collective on PetscBag 915c6c1daeSBarry Smith 925c6c1daeSBarry Smith Input Parameter: 935c6c1daeSBarry Smith + bag - the bag of values 945c6c1daeSBarry Smith . addr - location of integer in struct 955c6c1daeSBarry Smith . msize - number of entries in array 965c6c1daeSBarry Smith . name - name of the integer array 975c6c1daeSBarry Smith - help - longer string with more information about the value 985c6c1daeSBarry Smith 995c6c1daeSBarry Smith Level: beginner 1005c6c1daeSBarry Smith 1015c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 1025c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 1035c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 1045c6c1daeSBarry Smith 1055c6c1daeSBarry Smith @*/ 1065c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterIntArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 1075c6c1daeSBarry Smith { 1085c6c1daeSBarry Smith PetscErrorCode ierr; 1095c6c1daeSBarry Smith PetscBagItem item; 1105c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 1115c6c1daeSBarry Smith PetscBool printhelp; 1125c6c1daeSBarry Smith PetscInt i,tmp = msize; 1135c6c1daeSBarry Smith 1145c6c1daeSBarry Smith PetscFunctionBegin; 1155c6c1daeSBarry Smith /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/ 1165c6c1daeSBarry Smith nname[0] = '-'; 1175c6c1daeSBarry Smith nname[1] = 0; 1185c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 1190298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 1205c6c1daeSBarry Smith if (printhelp) { 1215c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr); 1225c6c1daeSBarry Smith for (i=0; i<msize; i++) { 1235c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr); 1245c6c1daeSBarry Smith } 1255c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 1265c6c1daeSBarry Smith } 1270298fd71SBarry Smith ierr = PetscOptionsGetIntArray(bag->bagprefix,nname,(PetscInt*)addr,&tmp,NULL);CHKERRQ(ierr); 1285c6c1daeSBarry Smith 129b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 1305c6c1daeSBarry Smith item->dtype = PETSC_INT; 1315c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 1325c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 1335c6c1daeSBarry Smith item->next = 0; 1345c6c1daeSBarry Smith item->msize = msize; 1355c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 1365c6c1daeSBarry Smith PetscFunctionReturn(0); 1375c6c1daeSBarry Smith } 1385c6c1daeSBarry Smith 1395c6c1daeSBarry Smith #undef __FUNCT__ 1405c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterRealArray" 1415c6c1daeSBarry Smith /*@C 1425c6c1daeSBarry Smith PetscBagRegisterRealArray - add an real array to the bag 1435c6c1daeSBarry Smith 1445c6c1daeSBarry Smith Logically Collective on PetscBag 1455c6c1daeSBarry Smith 1465c6c1daeSBarry Smith Input Parameter: 1475c6c1daeSBarry Smith + bag - the bag of values 1485c6c1daeSBarry Smith . addr - location of real array in struct 1495c6c1daeSBarry Smith . msize - number of entries in array 1505c6c1daeSBarry Smith . name - name of the integer array 1515c6c1daeSBarry Smith - help - longer string with more information about the value 1525c6c1daeSBarry Smith 1535c6c1daeSBarry Smith Level: beginner 1545c6c1daeSBarry Smith 1555c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 1565c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 1575c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 1585c6c1daeSBarry Smith 1595c6c1daeSBarry Smith @*/ 1605c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterRealArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 1615c6c1daeSBarry Smith { 1625c6c1daeSBarry Smith PetscErrorCode ierr; 1635c6c1daeSBarry Smith PetscBagItem item; 1645c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 1655c6c1daeSBarry Smith PetscBool printhelp; 1665c6c1daeSBarry Smith PetscInt i,tmp = msize; 1675c6c1daeSBarry Smith 1685c6c1daeSBarry Smith PetscFunctionBegin; 1695c6c1daeSBarry Smith /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/ 1705c6c1daeSBarry Smith nname[0] = '-'; 1715c6c1daeSBarry Smith nname[1] = 0; 1725c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 1730298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 1745c6c1daeSBarry Smith if (printhelp) { 1755c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr); 1765c6c1daeSBarry Smith for (i=0; i<msize; i++) { 17757622a8eSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,"%g ",(double)*((PetscReal*)addr)+i);CHKERRQ(ierr); 1785c6c1daeSBarry Smith } 1795c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 1805c6c1daeSBarry Smith } 1810298fd71SBarry Smith ierr = PetscOptionsGetRealArray(bag->bagprefix,nname,(PetscReal*)addr,&tmp,NULL);CHKERRQ(ierr); 1825c6c1daeSBarry Smith 183b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 1845c6c1daeSBarry Smith item->dtype = PETSC_REAL; 1855c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 1865c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 1875c6c1daeSBarry Smith item->next = 0; 1885c6c1daeSBarry Smith item->msize = msize; 1895c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 1905c6c1daeSBarry Smith PetscFunctionReturn(0); 1915c6c1daeSBarry Smith } 1925c6c1daeSBarry Smith 1935c6c1daeSBarry Smith #undef __FUNCT__ 1945c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterInt" 1955c6c1daeSBarry Smith /*@C 1965c6c1daeSBarry Smith PetscBagRegisterInt - add an integer value to the bag 1975c6c1daeSBarry Smith 1985c6c1daeSBarry Smith Logically Collective on PetscBag 1995c6c1daeSBarry Smith 2005c6c1daeSBarry Smith Input Parameter: 2015c6c1daeSBarry Smith + bag - the bag of values 2025c6c1daeSBarry Smith . addr - location of integer in struct 2035c6c1daeSBarry Smith . mdefault - the initial value 2045c6c1daeSBarry Smith . name - name of the integer 2055c6c1daeSBarry Smith - help - longer string with more information about the value 2065c6c1daeSBarry Smith 2075c6c1daeSBarry Smith Level: beginner 2085c6c1daeSBarry Smith 2095c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 2100d349d43SBarry Smith PetscBagRegister64bitInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 2115c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 2125c6c1daeSBarry Smith 2135c6c1daeSBarry Smith @*/ 2145c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterInt(PetscBag bag,void *addr,PetscInt mdefault,const char *name,const char *help) 2155c6c1daeSBarry Smith { 2165c6c1daeSBarry Smith PetscErrorCode ierr; 2175c6c1daeSBarry Smith PetscBagItem item; 2185c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 2195c6c1daeSBarry Smith PetscBool printhelp; 2205c6c1daeSBarry Smith 2215c6c1daeSBarry Smith PetscFunctionBegin; 2225c6c1daeSBarry Smith nname[0] = '-'; 2235c6c1daeSBarry Smith nname[1] = 0; 2245c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 2250298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 2265c6c1daeSBarry Smith if (printhelp) { 2275c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr); 2285c6c1daeSBarry Smith } 2290298fd71SBarry Smith ierr = PetscOptionsGetInt(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 2305c6c1daeSBarry Smith 231b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 2325c6c1daeSBarry Smith item->dtype = PETSC_INT; 2335c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 2345c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 2355c6c1daeSBarry Smith item->next = 0; 2365c6c1daeSBarry Smith item->msize = 1; 2375c6c1daeSBarry Smith *(PetscInt*)addr = mdefault; 2385c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 2395c6c1daeSBarry Smith PetscFunctionReturn(0); 2405c6c1daeSBarry Smith } 2415c6c1daeSBarry Smith 2425c6c1daeSBarry Smith #undef __FUNCT__ 2430d349d43SBarry Smith #define __FUNCT__ "PetscBagRegister64bitInt" 2440d349d43SBarry Smith /*@C 2450d349d43SBarry Smith PetscBagRegister64bitInt - add an integer value to the bag 2460d349d43SBarry Smith 2470d349d43SBarry Smith Logically Collective on PetscBag 2480d349d43SBarry Smith 2490d349d43SBarry Smith Input Parameter: 2500d349d43SBarry Smith + bag - the bag of values 2510d349d43SBarry Smith . addr - location of integer in struct 2520d349d43SBarry Smith . mdefault - the initial value 2530d349d43SBarry Smith . name - name of the integer 2540d349d43SBarry Smith - help - longer string with more information about the value 2550d349d43SBarry Smith 2560d349d43SBarry Smith Level: beginner 2570d349d43SBarry Smith 2580d349d43SBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 2590d349d43SBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 2600d349d43SBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 2610d349d43SBarry Smith 2620d349d43SBarry Smith @*/ 2630d349d43SBarry Smith PetscErrorCode PetscBagRegister64bitInt(PetscBag bag,void *addr,Petsc64bitInt mdefault,const char *name,const char *help) 2640d349d43SBarry Smith { 2650d349d43SBarry Smith PetscErrorCode ierr; 2660d349d43SBarry Smith PetscBagItem item; 2670d349d43SBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 2680d349d43SBarry Smith PetscBool printhelp; 2690d349d43SBarry Smith PetscInt odefault = (PetscInt)mdefault; 2700d349d43SBarry Smith PetscBool flg; 2710d349d43SBarry Smith 2720d349d43SBarry Smith PetscFunctionBegin; 2730d349d43SBarry Smith nname[0] = '-'; 2740d349d43SBarry Smith nname[1] = 0; 2750d349d43SBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 2760d349d43SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 2770d349d43SBarry Smith if (printhelp) { 2780d349d43SBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,odefault,help);CHKERRQ(ierr); 2790d349d43SBarry Smith } 2800d349d43SBarry Smith ierr = PetscOptionsGetInt(bag->bagprefix,nname,&odefault,&flg);CHKERRQ(ierr); 2810d349d43SBarry Smith if (flg) mdefault = (Petsc64bitInt)odefault; 2820d349d43SBarry Smith 2830d349d43SBarry Smith ierr = PetscNew(&item);CHKERRQ(ierr); 2840d349d43SBarry Smith item->dtype = PETSC_INT; 2850d349d43SBarry Smith item->offset = ((char*)addr) - ((char*)bag); 2860d349d43SBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 2870d349d43SBarry Smith item->next = 0; 2880d349d43SBarry Smith item->msize = 1; 2890d349d43SBarry Smith *(Petsc64bitInt*)addr = mdefault; 2900d349d43SBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 2910d349d43SBarry Smith PetscFunctionReturn(0); 2920d349d43SBarry Smith } 2930d349d43SBarry Smith 2940d349d43SBarry Smith #undef __FUNCT__ 295dd66f111SBlaise Bourdin #define __FUNCT__ "PetscBagRegisterBoolArray" 296dd66f111SBlaise Bourdin /*@C 297dd66f111SBlaise Bourdin PetscBagRegisterBoolArray - add a n logical values to the bag 298dd66f111SBlaise Bourdin 299dd66f111SBlaise Bourdin Logically Collective on PetscBag 300dd66f111SBlaise Bourdin 301dd66f111SBlaise Bourdin Input Parameter: 302dd66f111SBlaise Bourdin + bag - the bag of values 303dd66f111SBlaise Bourdin . addr - location of boolean array in struct 304dd66f111SBlaise Bourdin . msize - number of entries in array 305dd66f111SBlaise Bourdin . name - name of the boolean array 306dd66f111SBlaise Bourdin - help - longer string with more information about the value 307dd66f111SBlaise Bourdin 308dd66f111SBlaise Bourdin Level: beginner 309dd66f111SBlaise Bourdin 310dd66f111SBlaise Bourdin .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 311dd66f111SBlaise Bourdin PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 312dd66f111SBlaise Bourdin PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 313dd66f111SBlaise Bourdin 314dd66f111SBlaise Bourdin @*/ 315dd66f111SBlaise Bourdin PetscErrorCode PetscBagRegisterBoolArray(PetscBag bag,void *addr,PetscInt msize, const char* name, const char* help) 316dd66f111SBlaise Bourdin { 317dd66f111SBlaise Bourdin PetscErrorCode ierr; 318dd66f111SBlaise Bourdin PetscBagItem item; 319dd66f111SBlaise Bourdin char nname[PETSC_BAG_NAME_LENGTH+1]; 320dd66f111SBlaise Bourdin PetscBool printhelp; 321dd66f111SBlaise Bourdin PetscInt i,tmp = msize; 322dd66f111SBlaise Bourdin 323dd66f111SBlaise Bourdin PetscFunctionBegin; 324dd66f111SBlaise Bourdin /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/ 325dd66f111SBlaise Bourdin nname[0] = '-'; 326dd66f111SBlaise Bourdin nname[1] = 0; 327dd66f111SBlaise Bourdin ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 328dd66f111SBlaise Bourdin ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 329dd66f111SBlaise Bourdin if (printhelp) { 330dd66f111SBlaise Bourdin ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix?bag->bagprefix:"",name);CHKERRQ(ierr); 331dd66f111SBlaise Bourdin for (i=0; i<msize; i++) { 332dd66f111SBlaise Bourdin ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr); 333dd66f111SBlaise Bourdin } 334dd66f111SBlaise Bourdin ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 335dd66f111SBlaise Bourdin } 336dd66f111SBlaise Bourdin ierr = PetscOptionsGetBoolArray(bag->bagprefix,nname,(PetscBool*)addr,&tmp,NULL);CHKERRQ(ierr); 337dd66f111SBlaise Bourdin 338b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 339dd66f111SBlaise Bourdin item->dtype = PETSC_BOOL; 340dd66f111SBlaise Bourdin item->offset = ((char*)addr) - ((char*)bag); 341dd66f111SBlaise Bourdin if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 342dd66f111SBlaise Bourdin item->next = 0; 343dd66f111SBlaise Bourdin item->msize = msize; 344dd66f111SBlaise Bourdin ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 345dd66f111SBlaise Bourdin PetscFunctionReturn(0); 346dd66f111SBlaise Bourdin } 347dd66f111SBlaise Bourdin 348dd66f111SBlaise Bourdin #undef __FUNCT__ 3495c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterString" 3505c6c1daeSBarry Smith /*@C 3515c6c1daeSBarry Smith PetscBagRegisterString - add a string value to the bag 3525c6c1daeSBarry Smith 3535c6c1daeSBarry Smith Logically Collective on PetscBag 3545c6c1daeSBarry Smith 3555c6c1daeSBarry Smith Input Parameter: 3565c6c1daeSBarry Smith + bag - the bag of values 3575c6c1daeSBarry Smith . addr - location of start of string in struct 3585c6c1daeSBarry Smith . msize - length of the string space in the struct 3595c6c1daeSBarry Smith . mdefault - the initial value 3605c6c1daeSBarry Smith . name - name of the string 3615c6c1daeSBarry Smith - help - longer string with more information about the value 3625c6c1daeSBarry Smith 3635c6c1daeSBarry Smith Level: beginner 3645c6c1daeSBarry Smith 3655c6c1daeSBarry Smith Note: The struct should have the field char mystring[msize]; not char *mystring 3665c6c1daeSBarry Smith 3675c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 3685c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 3695c6c1daeSBarry Smith PetscBagSetFromOptions(),PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 3705c6c1daeSBarry Smith 3715c6c1daeSBarry Smith @*/ 3725c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterString(PetscBag bag,void *addr,PetscInt msize,const char* mdefault,const char* name,const char* help) 3735c6c1daeSBarry Smith { 3745c6c1daeSBarry Smith PetscErrorCode ierr; 3755c6c1daeSBarry Smith PetscBagItem item; 3765c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 3775c6c1daeSBarry Smith PetscBool printhelp; 3785c6c1daeSBarry Smith 3795c6c1daeSBarry Smith PetscFunctionBegin; 3805c6c1daeSBarry Smith nname[0] = '-'; 3815c6c1daeSBarry Smith nname[1] = 0; 3825c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 3830298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 3845c6c1daeSBarry Smith if (printhelp) { 3855c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr); 3865c6c1daeSBarry Smith } 3875c6c1daeSBarry Smith 388b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 3895c6c1daeSBarry Smith item->dtype = PETSC_CHAR; 3905c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 3915c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 3925c6c1daeSBarry Smith item->next = 0; 3935c6c1daeSBarry Smith item->msize = msize; 3945c6c1daeSBarry Smith if (mdefault != (char*)addr) { 3955c6c1daeSBarry Smith ierr = PetscStrncpy((char*)addr,mdefault,msize-1);CHKERRQ(ierr); 3965c6c1daeSBarry Smith } 3970298fd71SBarry Smith ierr = PetscOptionsGetString(bag->bagprefix,nname,(char*)addr,msize,NULL);CHKERRQ(ierr); 3985c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 3995c6c1daeSBarry Smith PetscFunctionReturn(0); 4005c6c1daeSBarry Smith } 4015c6c1daeSBarry Smith 4025c6c1daeSBarry Smith #undef __FUNCT__ 4035c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterReal" 4045c6c1daeSBarry Smith /*@C 4055c6c1daeSBarry Smith PetscBagRegisterReal - add a real value to the bag 4065c6c1daeSBarry Smith 4075c6c1daeSBarry Smith Logically Collective on PetscBag 4085c6c1daeSBarry Smith 4095c6c1daeSBarry Smith Input Parameter: 4105c6c1daeSBarry Smith + bag - the bag of values 4115c6c1daeSBarry Smith . addr - location of double in struct 4125c6c1daeSBarry Smith . mdefault - the initial value 4135c6c1daeSBarry Smith . name - name of the variable 4145c6c1daeSBarry Smith - help - longer string with more information about the value 4155c6c1daeSBarry Smith 4165c6c1daeSBarry Smith Level: beginner 4175c6c1daeSBarry Smith 4185c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 4195c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 4205c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 4215c6c1daeSBarry Smith 4225c6c1daeSBarry Smith @*/ 4235c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterReal(PetscBag bag,void *addr,PetscReal mdefault, const char *name, const char *help) 4245c6c1daeSBarry Smith { 4255c6c1daeSBarry Smith PetscErrorCode ierr; 4265c6c1daeSBarry Smith PetscBagItem item; 4275c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 4285c6c1daeSBarry Smith PetscBool printhelp; 4295c6c1daeSBarry Smith 4305c6c1daeSBarry Smith PetscFunctionBegin; 4315c6c1daeSBarry Smith nname[0] = '-'; 4325c6c1daeSBarry Smith nname[1] = 0; 4335c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 4340298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 4355c6c1daeSBarry Smith if (printhelp) { 43657622a8eSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)mdefault,help);CHKERRQ(ierr); 4375c6c1daeSBarry Smith } 4380298fd71SBarry Smith ierr = PetscOptionsGetReal(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 4395c6c1daeSBarry Smith 440b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 4415c6c1daeSBarry Smith item->dtype = PETSC_REAL; 4425c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 4435c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 4445c6c1daeSBarry Smith item->next = 0; 4455c6c1daeSBarry Smith item->msize = 1; 4465c6c1daeSBarry Smith *(PetscReal*)addr = mdefault; 4475c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 4485c6c1daeSBarry Smith PetscFunctionReturn(0); 4495c6c1daeSBarry Smith } 4505c6c1daeSBarry Smith 4515c6c1daeSBarry Smith #undef __FUNCT__ 4525c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterScalar" 4535c6c1daeSBarry Smith /*@C 4545c6c1daeSBarry Smith PetscBagRegisterScalar - add a real or complex number value to the bag 4555c6c1daeSBarry Smith 4565c6c1daeSBarry Smith Logically Collective on PetscBag 4575c6c1daeSBarry Smith 4585c6c1daeSBarry Smith Input Parameter: 4595c6c1daeSBarry Smith + bag - the bag of values 4605c6c1daeSBarry Smith . addr - location of scalar in struct 4615c6c1daeSBarry Smith . mdefault - the initial value 4625c6c1daeSBarry Smith . name - name of the variable 4635c6c1daeSBarry Smith - help - longer string with more information about the value 4645c6c1daeSBarry Smith 4655c6c1daeSBarry Smith 4665c6c1daeSBarry Smith Level: beginner 4675c6c1daeSBarry Smith 4685c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 4695c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 4705c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 4715c6c1daeSBarry Smith 4725c6c1daeSBarry Smith @*/ 4735c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterScalar(PetscBag bag,void *addr,PetscScalar mdefault,const char *name,const char *help) 4745c6c1daeSBarry Smith { 4755c6c1daeSBarry Smith PetscErrorCode ierr; 4765c6c1daeSBarry Smith PetscBagItem item; 4775c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 4785c6c1daeSBarry Smith PetscBool printhelp; 4795c6c1daeSBarry Smith 4805c6c1daeSBarry Smith PetscFunctionBegin; 4815c6c1daeSBarry Smith nname[0] = '-'; 4825c6c1daeSBarry Smith nname[1] = 0; 4835c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 4840298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 4855c6c1daeSBarry Smith if (printhelp) { 48657622a8eSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g + %gi>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)PetscRealPart(mdefault),(double)PetscImaginaryPart(mdefault),help);CHKERRQ(ierr); 4875c6c1daeSBarry Smith } 4880298fd71SBarry Smith ierr = PetscOptionsGetScalar(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 4895c6c1daeSBarry Smith 490b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 4915c6c1daeSBarry Smith item->dtype = PETSC_SCALAR; 4925c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 4935c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 4945c6c1daeSBarry Smith item->next = 0; 4955c6c1daeSBarry Smith item->msize = 1; 4965c6c1daeSBarry Smith *(PetscScalar*)addr = mdefault; 4975c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 4985c6c1daeSBarry Smith PetscFunctionReturn(0); 4995c6c1daeSBarry Smith } 5005c6c1daeSBarry Smith 5015c6c1daeSBarry Smith #undef __FUNCT__ 5025c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterBool" 5035c6c1daeSBarry Smith /*@C 5045c6c1daeSBarry Smith PetscBagRegisterBool - add a logical value to the bag 5055c6c1daeSBarry Smith 5065c6c1daeSBarry Smith Logically Collective on PetscBag 5075c6c1daeSBarry Smith 5085c6c1daeSBarry Smith Input Parameter: 5095c6c1daeSBarry Smith + bag - the bag of values 5105c6c1daeSBarry Smith . addr - location of logical in struct 5115c6c1daeSBarry Smith . mdefault - the initial value 5125c6c1daeSBarry Smith . name - name of the variable 5135c6c1daeSBarry Smith - help - longer string with more information about the value 5145c6c1daeSBarry Smith 5155c6c1daeSBarry Smith 5165c6c1daeSBarry Smith Level: beginner 5175c6c1daeSBarry Smith 5185c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 5195c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 5205c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 5215c6c1daeSBarry Smith 5225c6c1daeSBarry Smith @*/ 5235c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterBool(PetscBag bag,void *addr,PetscBool mdefault,const char *name,const char *help) 5245c6c1daeSBarry Smith { 5255c6c1daeSBarry Smith PetscErrorCode ierr; 5265c6c1daeSBarry Smith PetscBagItem item; 5275c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 5285c6c1daeSBarry Smith PetscBool printhelp; 5295c6c1daeSBarry Smith 5305c6c1daeSBarry Smith PetscFunctionBegin; 5315c6c1daeSBarry Smith /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 5325c6c1daeSBarry Smith if (mdefault != PETSC_FALSE && mdefault != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Boolean %s %s must be boolean; integer value %d",name,help,(int)mdefault); 5335c6c1daeSBarry Smith nname[0] = '-'; 5345c6c1daeSBarry Smith nname[1] = 0; 5355c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 5360298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr); 5375c6c1daeSBarry Smith if (printhelp) { 5385c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,PetscBools[mdefault],help);CHKERRQ(ierr); 5395c6c1daeSBarry Smith } 5400298fd71SBarry Smith ierr = PetscOptionsGetBool(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 5415c6c1daeSBarry Smith 542b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 5435c6c1daeSBarry Smith item->dtype = PETSC_BOOL; 5445c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 5455c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 5465c6c1daeSBarry Smith item->next = 0; 5475c6c1daeSBarry Smith item->msize = 1; 5485c6c1daeSBarry Smith *(PetscBool*)addr = mdefault; 5495c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 5505c6c1daeSBarry Smith PetscFunctionReturn(0); 5515c6c1daeSBarry Smith } 5525c6c1daeSBarry Smith 5535c6c1daeSBarry Smith #undef __FUNCT__ 5545c6c1daeSBarry Smith #define __FUNCT__ "PetscBagDestroy" 5555c6c1daeSBarry Smith /*@C 5565c6c1daeSBarry Smith PetscBagDestroy - Destroys a bag values 5575c6c1daeSBarry Smith 5585c6c1daeSBarry Smith Collective on PetscBag 5595c6c1daeSBarry Smith 5605c6c1daeSBarry Smith Input Parameter: 5615c6c1daeSBarry Smith . bag - the bag of values 5625c6c1daeSBarry Smith 5635c6c1daeSBarry Smith Level: beginner 5645c6c1daeSBarry Smith 5655c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 5665c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 5675c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 5685c6c1daeSBarry Smith 5695c6c1daeSBarry Smith @*/ 5705c6c1daeSBarry Smith PetscErrorCode PetscBagDestroy(PetscBag *bag) 5715c6c1daeSBarry Smith { 5725c6c1daeSBarry Smith PetscErrorCode ierr; 5735c6c1daeSBarry Smith PetscBagItem nitem = (*bag)->bagitems,item; 5745c6c1daeSBarry Smith 5755c6c1daeSBarry Smith PetscFunctionBegin; 5765c6c1daeSBarry Smith while (nitem) { 5775c6c1daeSBarry Smith item = nitem->next; 5785c6c1daeSBarry Smith if (nitem->list) { 5795c6c1daeSBarry Smith ierr = PetscStrArrayDestroy(&nitem->list);CHKERRQ(ierr); 5805c6c1daeSBarry Smith } 5815c6c1daeSBarry Smith ierr = PetscFree(nitem);CHKERRQ(ierr); 5825c6c1daeSBarry Smith nitem = item; 5835c6c1daeSBarry Smith } 5845c6c1daeSBarry Smith if ((*bag)->bagprefix) { ierr = PetscFree((*bag)->bagprefix);CHKERRQ(ierr); } 5855c6c1daeSBarry Smith ierr = PetscFree(*bag);CHKERRQ(ierr); 5865c6c1daeSBarry Smith PetscFunctionReturn(0); 5875c6c1daeSBarry Smith } 5885c6c1daeSBarry Smith 5895c6c1daeSBarry Smith #undef __FUNCT__ 5905c6c1daeSBarry Smith #define __FUNCT__ "PetscBagSetFromOptions" 5915c6c1daeSBarry Smith /*@ 5925c6c1daeSBarry Smith PetscBagSetFromOptions - Allows setting options from a bag 5935c6c1daeSBarry Smith 5945c6c1daeSBarry Smith Collective on PetscBag 5955c6c1daeSBarry Smith 5965c6c1daeSBarry Smith Input Parameter: 5975c6c1daeSBarry Smith . bag - the bag of values 5985c6c1daeSBarry Smith 5995c6c1daeSBarry Smith Level: beginner 6005c6c1daeSBarry Smith 6015c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData() 6025c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 6035c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagView(), PetscBagRegisterEnum() 6045c6c1daeSBarry Smith 6055c6c1daeSBarry Smith @*/ 6065c6c1daeSBarry Smith PetscErrorCode PetscBagSetFromOptions(PetscBag bag) 6075c6c1daeSBarry Smith { 6085c6c1daeSBarry Smith PetscErrorCode ierr; 6095c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 6105c6c1daeSBarry Smith char name[PETSC_BAG_NAME_LENGTH+1],helpname[PETSC_BAG_NAME_LENGTH+PETSC_BAG_HELP_LENGTH+3]; 6115c6c1daeSBarry Smith PetscInt n; 6125c6c1daeSBarry Smith 6135c6c1daeSBarry Smith PetscFunctionBegin; 6145c6c1daeSBarry Smith ierr = PetscStrcpy(helpname,bag->bagname);CHKERRQ(ierr); 6155c6c1daeSBarry Smith ierr = PetscStrcat(helpname," ");CHKERRQ(ierr); 6165c6c1daeSBarry Smith ierr = PetscStrcat(helpname,bag->baghelp);CHKERRQ(ierr); 6175c6c1daeSBarry Smith ierr = PetscOptionsBegin(bag->bagcomm,bag->bagprefix,helpname,0); 6185c6c1daeSBarry Smith while (nitem) { 6195c6c1daeSBarry Smith name[0] = '-'; 6205c6c1daeSBarry Smith name[1] = 0; 6215c6c1daeSBarry Smith ierr = PetscStrcat(name,nitem->name);CHKERRQ(ierr); 6225c6c1daeSBarry Smith if (nitem->dtype == PETSC_CHAR) { /* special handling for fortran required? [due to space padding vs null termination] */ 6235c6c1daeSBarry Smith char *value = (char*)(((char*)bag) + nitem->offset); 6240298fd71SBarry Smith ierr = PetscOptionsString(name,nitem->help,"",value,value,nitem->msize,NULL);CHKERRQ(ierr); 6255c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_REAL) { 6265c6c1daeSBarry Smith PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 6275c6c1daeSBarry Smith if (nitem->msize == 1) { 6280298fd71SBarry Smith ierr = PetscOptionsReal(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 6295c6c1daeSBarry Smith } else { 6305c6c1daeSBarry Smith n = nitem->msize; 6310298fd71SBarry Smith ierr = PetscOptionsRealArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 6325c6c1daeSBarry Smith } 6335c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_SCALAR) { 6345c6c1daeSBarry Smith PetscScalar *value = (PetscScalar*)(((char*)bag) + nitem->offset); 6350298fd71SBarry Smith ierr = PetscOptionsScalar(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 6365c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_INT) { 6375c6c1daeSBarry Smith PetscInt *value = (PetscInt*)(((char*)bag) + nitem->offset); 6385c6c1daeSBarry Smith if (nitem->msize == 1) { 6390298fd71SBarry Smith ierr = PetscOptionsInt(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 6405c6c1daeSBarry Smith } else { 6415c6c1daeSBarry Smith n = nitem->msize; 6420298fd71SBarry Smith ierr = PetscOptionsIntArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 6435c6c1daeSBarry Smith } 6445c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_ENUM) { 6455c6c1daeSBarry Smith PetscEnum *value = (PetscEnum*)(((char*)bag) + nitem->offset); 6465c6c1daeSBarry Smith PetscInt i = 0; 6475c6c1daeSBarry Smith while (nitem->list[i++]) ; 6480298fd71SBarry Smith ierr = PetscOptionsEnum(name,nitem->help,nitem->list[i-3],(const char*const*)nitem->list,*value,value,NULL);CHKERRQ(ierr); 6495c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_BOOL) { 6505c6c1daeSBarry Smith PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 651dd66f111SBlaise Bourdin if (nitem->msize == 1) { 6520298fd71SBarry Smith ierr = PetscOptionsBool(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 653dd66f111SBlaise Bourdin } else { 654dd66f111SBlaise Bourdin n = nitem->msize; 655dd66f111SBlaise Bourdin ierr = PetscOptionsBoolArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 656dd66f111SBlaise Bourdin } 6575c6c1daeSBarry Smith } 6585c6c1daeSBarry Smith nitem = nitem->next; 6595c6c1daeSBarry Smith } 6605c6c1daeSBarry Smith PetscOptionsEnd(); 6615c6c1daeSBarry Smith PetscFunctionReturn(0); 6625c6c1daeSBarry Smith } 6635c6c1daeSBarry Smith 6645c6c1daeSBarry Smith #undef __FUNCT__ 6655c6c1daeSBarry Smith #define __FUNCT__ "PetscBagView" 6665c6c1daeSBarry Smith /*@C 6675c6c1daeSBarry Smith PetscBagView - Views a bag of values as either ASCII text or a binary file 6685c6c1daeSBarry Smith 6695c6c1daeSBarry Smith Collective on PetscBag 6705c6c1daeSBarry Smith 6715c6c1daeSBarry Smith Input Parameter: 6725c6c1daeSBarry Smith + bag - the bag of values 6735c6c1daeSBarry Smith - viewer - location to view the values 6745c6c1daeSBarry Smith 6755c6c1daeSBarry Smith Level: beginner 6765c6c1daeSBarry Smith 6775c6c1daeSBarry Smith Warning: Currently PETSc bags saved in a binary file can only be read back 6785c6c1daeSBarry Smith in on a machine of the same architecture. Let us know when this is a problem 6795c6c1daeSBarry Smith and we'll fix it. 6805c6c1daeSBarry Smith 6815c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData() 6825c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum() 6835c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName() 6845c6c1daeSBarry Smith 6855c6c1daeSBarry Smith @*/ 6865c6c1daeSBarry Smith PetscErrorCode PetscBagView(PetscBag bag,PetscViewer view) 6875c6c1daeSBarry Smith { 6885c6c1daeSBarry Smith PetscBool isascii,isbinary; 6895c6c1daeSBarry Smith PetscErrorCode ierr; 6905c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 6915c6c1daeSBarry Smith 6925c6c1daeSBarry Smith PetscFunctionBegin; 6935c6c1daeSBarry Smith ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr); 6945c6c1daeSBarry Smith ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 6955c6c1daeSBarry Smith if (isascii) { 6963ffde785SBarry Smith if (bag->bagprefix) { 6973ffde785SBarry Smith ierr = PetscViewerASCIIPrintf(view,"PetscBag Object: %s (%s) %s\n",bag->bagname,bag->bagprefix,bag->baghelp);CHKERRQ(ierr); 6983ffde785SBarry Smith } else { 6995c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"PetscBag Object: %s %s\n",bag->bagname,bag->baghelp);CHKERRQ(ierr); 7003ffde785SBarry Smith } 7015c6c1daeSBarry Smith while (nitem) { 7025c6c1daeSBarry Smith if (nitem->dtype == PETSC_CHAR) { 7035c6c1daeSBarry Smith char *value = (char*)(((char*)bag) + nitem->offset); 7045c6c1daeSBarry Smith char tmp = value[nitem->msize-1]; /* special handling for fortran chars wihout null terminator */ 7055c6c1daeSBarry Smith value[nitem->msize-1] =0; 7065c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %s; %s\n",nitem->name,value,nitem->help);CHKERRQ(ierr); 7075c6c1daeSBarry Smith value[nitem->msize-1] = tmp; 7085c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_REAL) { 7095c6c1daeSBarry Smith PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 7105c6c1daeSBarry Smith PetscInt i; 7115c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 7125c6c1daeSBarry Smith for (i=0; i<nitem->msize; i++) { 71357622a8eSBarry Smith ierr = PetscViewerASCIIPrintf(view,"%g ",(double)value[i]);CHKERRQ(ierr); 7145c6c1daeSBarry Smith } 7155c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 7165c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_SCALAR) { 7175c6c1daeSBarry Smith PetscScalar value = *(PetscScalar*)(((char*)bag) + nitem->offset); 7185c6c1daeSBarry Smith #if defined(PETSC_USE_COMPLEX) 71957622a8eSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %g + %gi; %s\n",nitem->name,(double)PetscRealPart(value),(double)PetscImaginaryPart(value),nitem->help);CHKERRQ(ierr); 7205c6c1daeSBarry Smith #else 72157622a8eSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %g; %s\n",nitem->name,(double)value,nitem->help);CHKERRQ(ierr); 7225c6c1daeSBarry Smith #endif 7235c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_INT) { 7245c6c1daeSBarry Smith PetscInt i,*value = (PetscInt*)(((char*)bag) + nitem->offset); 7255c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 7265c6c1daeSBarry Smith for (i=0; i<nitem->msize; i++) { 7275c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"%D ",value[i]);CHKERRQ(ierr); 7285c6c1daeSBarry Smith } 7295c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 7305c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_BOOL) { 731dd66f111SBlaise Bourdin PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 732dd66f111SBlaise Bourdin PetscInt i; 7335c6c1daeSBarry Smith /* some Fortran compilers use -1 as boolean */ 734dd66f111SBlaise Bourdin ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 735dd66f111SBlaise Bourdin for (i=0; i<nitem->msize; i++) { 736dd66f111SBlaise Bourdin if (((int) value[i]) == -1) value[i] = PETSC_TRUE; 7375c6c1daeSBarry Smith /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 738dd66f111SBlaise Bourdin if (value[i] != PETSC_FALSE && value[i] != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Boolean value for %s %s is corrupt; integer value %d",nitem->name,nitem->help,value); 739dd66f111SBlaise Bourdin ierr = PetscViewerASCIIPrintf(view," %s",PetscBools[value[i]]);CHKERRQ(ierr); 740dd66f111SBlaise Bourdin } 741dd66f111SBlaise Bourdin ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 7425c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_ENUM) { 7435c6c1daeSBarry Smith PetscEnum value = *(PetscEnum*)(((char*)bag) + nitem->offset); 7445c6c1daeSBarry Smith PetscInt i = 0; 7455c6c1daeSBarry Smith while (nitem->list[i++]) ; 7465c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %s; (%s) %s\n",nitem->name,nitem->list[value],nitem->list[i-3],nitem->help);CHKERRQ(ierr); 7475c6c1daeSBarry Smith } 7485c6c1daeSBarry Smith nitem = nitem->next; 7495c6c1daeSBarry Smith } 7505c6c1daeSBarry Smith } else if (isbinary) { 7515c6c1daeSBarry Smith PetscInt classid = PETSC_BAG_FILE_CLASSID, dtype; 7525c6c1daeSBarry Smith PetscInt deprecatedbagsize = 0; 753a261c58fSBarry Smith PetscViewerFormat format; 7545c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&classid,1,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr); 7555c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&deprecatedbagsize,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7565c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&bag->count,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7575c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,bag->bagname,PETSC_BAG_NAME_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7585c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7595c6c1daeSBarry Smith while (nitem) { 7605c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&nitem->offset,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7615c6c1daeSBarry Smith dtype = (PetscInt)nitem->dtype; 7625c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&dtype,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7635c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,nitem->name,PETSC_BAG_NAME_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7645c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,nitem->help,PETSC_BAG_HELP_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7655c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&nitem->msize,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7665c6c1daeSBarry Smith /* some Fortran compilers use -1 as boolean */ 7675c6c1daeSBarry Smith if (dtype == PETSC_BOOL && ((*(int*) (((char*)bag) + nitem->offset) == -1))) *(int*) (((char*)bag) + nitem->offset) = PETSC_TRUE; 7685c6c1daeSBarry Smith 7695c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,(((char*)bag) + nitem->offset),nitem->msize,nitem->dtype,PETSC_FALSE);CHKERRQ(ierr); 7705c6c1daeSBarry Smith if (dtype == PETSC_ENUM) { 7715c6c1daeSBarry Smith ierr = PetscViewerBinaryWriteStringArray(view,(char**)nitem->list);CHKERRQ(ierr); 7725c6c1daeSBarry Smith } 7735c6c1daeSBarry Smith nitem = nitem->next; 7745c6c1daeSBarry Smith } 775a261c58fSBarry Smith ierr = PetscViewerGetFormat(view,&format);CHKERRQ(ierr); 776a261c58fSBarry Smith if (format == PETSC_VIEWER_BINARY_MATLAB) { 777a261c58fSBarry Smith MPI_Comm comm; 778a261c58fSBarry Smith FILE *info; 779a261c58fSBarry Smith ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr); 780a261c58fSBarry Smith ierr = PetscViewerBinaryGetInfoPointer(view,&info);CHKERRQ(ierr); 781da88d4d4SJed Brown ierr = PetscFPrintf(comm,info,"#--- begin code written by PetscViewerBinary for MATLAB format ---#\n");CHKERRQ(ierr); 782da88d4d4SJed Brown ierr = PetscFPrintf(comm,info,"#$$ Set.%s = PetscBinaryRead(fd);\n",bag->bagname);CHKERRQ(ierr); 783da88d4d4SJed Brown ierr = PetscFPrintf(comm,info,"#--- end code written by PetscViewerBinary for MATLAB format ---#\n\n");CHKERRQ(ierr); 784a261c58fSBarry Smith } 785a261c58fSBarry Smith } 7865c6c1daeSBarry Smith PetscFunctionReturn(0); 7875c6c1daeSBarry Smith } 7885c6c1daeSBarry Smith 7895c6c1daeSBarry Smith #undef __FUNCT__ 7905c6c1daeSBarry Smith #define __FUNCT__ "PetscBagLoad" 7915c6c1daeSBarry Smith /*@C 7925c6c1daeSBarry Smith PetscBagLoad - Loads a bag of values from a binary file 7935c6c1daeSBarry Smith 7945c6c1daeSBarry Smith Collective on PetscViewer 7955c6c1daeSBarry Smith 7965c6c1daeSBarry Smith Input Parameter: 7975c6c1daeSBarry Smith + viewer - file to load values from 7985c6c1daeSBarry Smith - bag - the bag of values 7995c6c1daeSBarry Smith 8005c6c1daeSBarry Smith Notes: You must have created and registered all the fields in the bag before loading into it. 8015c6c1daeSBarry Smith 8025c6c1daeSBarry Smith Notes: 8035c6c1daeSBarry Smith Level: beginner 8045c6c1daeSBarry Smith 8055c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagView(), PetscBagGetData() 8065c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 8075c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 8085c6c1daeSBarry Smith 8095c6c1daeSBarry Smith @*/ 8105c6c1daeSBarry Smith PetscErrorCode PetscBagLoad(PetscViewer view,PetscBag bag) 8115c6c1daeSBarry Smith { 8125c6c1daeSBarry Smith PetscErrorCode ierr; 8135c6c1daeSBarry Smith PetscBool isbinary; 814*060da220SMatthew G. Knepley PetscInt classid,bagcount,i,dtype,msize,offset,deprecatedbagsize; 8155c6c1daeSBarry Smith char name[PETSC_BAG_NAME_LENGTH],help[PETSC_BAG_HELP_LENGTH],**list; 8165c6c1daeSBarry Smith PetscBagItem nitem; 8175c6c1daeSBarry Smith MPI_Comm comm; 8185c6c1daeSBarry Smith PetscMPIInt flag; 8195c6c1daeSBarry Smith 8205c6c1daeSBarry Smith PetscFunctionBegin; 8215c6c1daeSBarry Smith ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr); 8225c6c1daeSBarry Smith ierr = MPI_Comm_compare(comm,bag->bagcomm,&flag);CHKERRQ(ierr); 8235c6c1daeSBarry Smith if (flag != MPI_CONGRUENT && flag != MPI_IDENT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"Different communicators in the viewer and bag"); \ 8245c6c1daeSBarry Smith ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 8255c6c1daeSBarry Smith if (!isbinary) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for this viewer type"); 8265c6c1daeSBarry Smith 827*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&classid,1,NULL,PETSC_INT);CHKERRQ(ierr); 8285c6c1daeSBarry Smith if (classid != PETSC_BAG_FILE_CLASSID) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not PetscBag next in binary file"); 829*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&deprecatedbagsize,1,NULL,PETSC_INT);CHKERRQ(ierr); 830*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&bagcount,1,NULL,PETSC_INT);CHKERRQ(ierr); 8315c6c1daeSBarry Smith if (bagcount != bag->count) SETERRQ2(comm,PETSC_ERR_ARG_INCOMP,"Bag in file has different number of entries %d then passed in bag %d\n",(int)bagcount,(int)bag->count);CHKERRQ(ierr); 832*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,bag->bagname,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 833*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 8345c6c1daeSBarry Smith 8355c6c1daeSBarry Smith nitem = bag->bagitems; 8365c6c1daeSBarry Smith for (i=0; i<bagcount; i++) { 837*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&offset,1,NULL,PETSC_INT);CHKERRQ(ierr); 8385c6c1daeSBarry Smith /* ignore the offset in the file */ 839*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&dtype,1,NULL,PETSC_INT);CHKERRQ(ierr); 840*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,name,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 841*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,help,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 842*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&msize,1,NULL,PETSC_INT);CHKERRQ(ierr); 8435c6c1daeSBarry Smith 8445c6c1daeSBarry Smith if (dtype == (PetscInt) PETSC_CHAR) { 845*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_CHAR);CHKERRQ(ierr); 8465c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_REAL) { 847*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_REAL);CHKERRQ(ierr); 8485c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_SCALAR) { 849*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_SCALAR);CHKERRQ(ierr); 8505c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_INT) { 851*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_INT);CHKERRQ(ierr); 8525c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_BOOL) { 853*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_BOOL);CHKERRQ(ierr); 8545c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_ENUM) { 855*060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_ENUM);CHKERRQ(ierr); 8565c6c1daeSBarry Smith ierr = PetscViewerBinaryReadStringArray(view,&list);CHKERRQ(ierr); 8575c6c1daeSBarry Smith /* don't need to save list because it is already registered in the bag */ 8585c6c1daeSBarry Smith ierr = PetscFree(list);CHKERRQ(ierr); 8595c6c1daeSBarry Smith } 8605c6c1daeSBarry Smith nitem = nitem->next; 8615c6c1daeSBarry Smith } 8625c6c1daeSBarry Smith PetscFunctionReturn(0); 8635c6c1daeSBarry Smith } 8645c6c1daeSBarry Smith 8655c6c1daeSBarry Smith #undef __FUNCT__ 8665c6c1daeSBarry Smith #define __FUNCT__ "PetscBagCreate" 8675c6c1daeSBarry Smith /*@ 8685c6c1daeSBarry Smith PetscBagCreate - Create a bag of values 8695c6c1daeSBarry Smith 8705c6c1daeSBarry Smith Collective on MPI_Comm 8715c6c1daeSBarry Smith 8725c6c1daeSBarry Smith Level: Intermediate 8735c6c1daeSBarry Smith 8745c6c1daeSBarry Smith Input Parameters: 8755c6c1daeSBarry Smith + comm - communicator to share bag 8765c6c1daeSBarry Smith - bagsize - size of the C structure holding the values 8775c6c1daeSBarry Smith 8785c6c1daeSBarry Smith Output Parameter: 8795c6c1daeSBarry Smith . bag - the bag of values 8805c6c1daeSBarry Smith 8815c6c1daeSBarry Smith Notes: 8825c6c1daeSBarry Smith The size of the A struct must be small enough to fit in a PetscInt; by default 8835c6c1daeSBarry Smith PetscInt is 4 bytes; this means a bag cannot be larger than 2 gigabytes in length. 8845c6c1daeSBarry Smith The warning about casting to a shorter length can be ignored below unless your A struct is too large 8855c6c1daeSBarry Smith 8865c6c1daeSBarry Smith .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 8875c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 8885c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 8895c6c1daeSBarry Smith @*/ 8905c6c1daeSBarry Smith PetscErrorCode PetscBagCreate(MPI_Comm comm, size_t bagsize, PetscBag *bag) 8915c6c1daeSBarry Smith { 8925c6c1daeSBarry Smith PetscErrorCode ierr; 8935c6c1daeSBarry Smith size_t totalsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar); 8945c6c1daeSBarry Smith 8955c6c1daeSBarry Smith PetscFunctionBegin; 8960298fd71SBarry Smith ierr = PetscInfo1(NULL,"Creating Bag with total size %d\n",(int)totalsize);CHKERRQ(ierr); 8975c6c1daeSBarry Smith ierr = PetscMalloc(totalsize,bag);CHKERRQ(ierr); 8985c6c1daeSBarry Smith ierr = PetscMemzero(*bag,bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar));CHKERRQ(ierr); 899a297a907SKarl Rupp 9005c6c1daeSBarry Smith (*bag)->bagsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar); 9015c6c1daeSBarry Smith (*bag)->bagcomm = comm; 9020298fd71SBarry Smith (*bag)->bagprefix = NULL; 9035c6c1daeSBarry Smith (*bag)->structlocation = (void*)(((char*)(*bag)) + sizeof(PetscScalar)*(sizeof(struct _n_PetscBag)/sizeof(PetscScalar)) + sizeof(PetscScalar)); 9045c6c1daeSBarry Smith PetscFunctionReturn(0); 9055c6c1daeSBarry Smith } 9065c6c1daeSBarry Smith 9075c6c1daeSBarry Smith #undef __FUNCT__ 9085c6c1daeSBarry Smith #define __FUNCT__ "PetscBagSetName" 9095c6c1daeSBarry Smith /*@C 9105c6c1daeSBarry Smith PetscBagSetName - Sets the name of a bag of values 9115c6c1daeSBarry Smith 9125c6c1daeSBarry Smith Not Collective 9135c6c1daeSBarry Smith 9145c6c1daeSBarry Smith Level: Intermediate 9155c6c1daeSBarry Smith 9165c6c1daeSBarry Smith Input Parameters: 9175c6c1daeSBarry Smith + bag - the bag of values 9185c6c1daeSBarry Smith . name - the name assigned to the bag 9195c6c1daeSBarry Smith - help - help message for bag 9205c6c1daeSBarry Smith 9215c6c1daeSBarry Smith .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 9225c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 9235c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 9245c6c1daeSBarry Smith @*/ 9255c6c1daeSBarry Smith 9265c6c1daeSBarry Smith PetscErrorCode PetscBagSetName(PetscBag bag, const char *name, const char *help) 9275c6c1daeSBarry Smith { 9285c6c1daeSBarry Smith PetscErrorCode ierr; 9295fd66863SKarl Rupp 9305c6c1daeSBarry Smith PetscFunctionBegin; 9315c6c1daeSBarry Smith ierr = PetscStrncpy(bag->bagname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 9325c6c1daeSBarry Smith ierr = PetscStrncpy(bag->baghelp,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr); 9335c6c1daeSBarry Smith PetscFunctionReturn(0); 9345c6c1daeSBarry Smith } 9355c6c1daeSBarry Smith 9365c6c1daeSBarry Smith 9375c6c1daeSBarry Smith #undef __FUNCT__ 9385c6c1daeSBarry Smith #define __FUNCT__ "PetscBagGetName" 9395c6c1daeSBarry Smith /*@C 9405c6c1daeSBarry Smith PetscBagGetName - Gets the name of a bag of values 9415c6c1daeSBarry Smith 9425c6c1daeSBarry Smith Not Collective 9435c6c1daeSBarry Smith 9445c6c1daeSBarry Smith Level: Intermediate 9455c6c1daeSBarry Smith 9465c6c1daeSBarry Smith Input Parameter: 9475c6c1daeSBarry Smith . bag - the bag of values 9485c6c1daeSBarry Smith 9495c6c1daeSBarry Smith Output Parameter: 9505c6c1daeSBarry Smith . name - the name assigned to the bag 9515c6c1daeSBarry Smith 9525c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 9535c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 9545c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 9555c6c1daeSBarry Smith @*/ 9565c6c1daeSBarry Smith PetscErrorCode PetscBagGetName(PetscBag bag, char **name) 9575c6c1daeSBarry Smith { 9585c6c1daeSBarry Smith PetscFunctionBegin; 9595c6c1daeSBarry Smith *name = bag->bagname; 9605c6c1daeSBarry Smith PetscFunctionReturn(0); 9615c6c1daeSBarry Smith } 9625c6c1daeSBarry Smith 9635c6c1daeSBarry Smith #undef __FUNCT__ 9645c6c1daeSBarry Smith #define __FUNCT__ "PetscBagGetData" 9655c6c1daeSBarry Smith /*@C 9665c6c1daeSBarry Smith PetscBagGetData - Gives back the user - access to memory that 9675c6c1daeSBarry Smith should be used for storing user-data-structure 9685c6c1daeSBarry Smith 9695c6c1daeSBarry Smith Not Collective 9705c6c1daeSBarry Smith 9715c6c1daeSBarry Smith Level: Intermediate 9725c6c1daeSBarry Smith 9735c6c1daeSBarry Smith Input Parameter: 9745c6c1daeSBarry Smith . bag - the bag of values 9755c6c1daeSBarry Smith 9765c6c1daeSBarry Smith Output Parameter: 9775c6c1daeSBarry Smith . data - pointer to memory that will have user-data-structure 9785c6c1daeSBarry Smith 9795c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad() 9805c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 9815c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 9825c6c1daeSBarry Smith @*/ 9835c6c1daeSBarry Smith PetscErrorCode PetscBagGetData(PetscBag bag, void **data) 9845c6c1daeSBarry Smith { 9855c6c1daeSBarry Smith PetscFunctionBegin; 9865c6c1daeSBarry Smith *data = bag->structlocation; 9875c6c1daeSBarry Smith PetscFunctionReturn(0); 9885c6c1daeSBarry Smith } 9895c6c1daeSBarry Smith 9905c6c1daeSBarry Smith #undef __FUNCT__ 9915c6c1daeSBarry Smith #define __FUNCT__ "PetscBagSetOptionsPrefix" 9925c6c1daeSBarry Smith /*@C 9935c6c1daeSBarry Smith PetscBagSetOptionsPrefix - Sets the prefix used for searching for all 9945c6c1daeSBarry Smith PetscBag items in the options database. 9955c6c1daeSBarry Smith 9965c6c1daeSBarry Smith Logically collective on Bag. 9975c6c1daeSBarry Smith 9985c6c1daeSBarry Smith Level: Intermediate 9995c6c1daeSBarry Smith 10005c6c1daeSBarry Smith Input Parameters: 10015c6c1daeSBarry Smith + bag - the bag of values 10025c6c1daeSBarry Smith - prefix - the prefix to prepend all Bag item names with. 10035c6c1daeSBarry Smith 10045c6c1daeSBarry Smith NOTES: Must be called prior to registering any of the bag items. 10055c6c1daeSBarry Smith 10065c6c1daeSBarry Smith .seealso: PetscBag, PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 10075c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 10085c6c1daeSBarry Smith @*/ 10095c6c1daeSBarry Smith 10105c6c1daeSBarry Smith PetscErrorCode PetscBagSetOptionsPrefix(PetscBag bag, const char pre[]) 10115c6c1daeSBarry Smith { 10125c6c1daeSBarry Smith PetscErrorCode ierr; 10135fd66863SKarl Rupp 10145c6c1daeSBarry Smith PetscFunctionBegin; 10155c6c1daeSBarry Smith if (!pre) { 10165c6c1daeSBarry Smith ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr); 10175c6c1daeSBarry Smith } else { 10185c6c1daeSBarry Smith if (pre[0] == '-') SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Options prefix should not begin with a hypen"); 10195c6c1daeSBarry Smith ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr); 10205c6c1daeSBarry Smith ierr = PetscStrallocpy(pre,&(bag->bagprefix));CHKERRQ(ierr); 10215c6c1daeSBarry Smith } 10225c6c1daeSBarry Smith PetscFunctionReturn(0); 10235c6c1daeSBarry Smith } 1024ffb7e86cSMatthew G. Knepley 1025ffb7e86cSMatthew G. Knepley #undef __FUNCT__ 1026ffb7e86cSMatthew G. Knepley #define __FUNCT__ "PetscBagGetNames" 1027ffb7e86cSMatthew G. Knepley /*@C 1028ffb7e86cSMatthew G. Knepley PetscBagGetNames - Get the names of all entries in the bag 1029ffb7e86cSMatthew G. Knepley 1030ffb7e86cSMatthew G. Knepley Not collective 1031ffb7e86cSMatthew G. Knepley 1032ffb7e86cSMatthew G. Knepley Input Parameters: 1033ffb7e86cSMatthew G. Knepley + bag - the bag of values 1034ffb7e86cSMatthew G. Knepley - names - array of the correct size to hold names 1035ffb7e86cSMatthew G. Knepley 1036ffb7e86cSMatthew G. Knepley Output Parameter: 1037ffb7e86cSMatthew G. Knepley . names - array of char pointers for names 1038ffb7e86cSMatthew G. Knepley 1039ffb7e86cSMatthew G. Knepley Level: intermediate 1040ffb7e86cSMatthew G. Knepley 1041ffb7e86cSMatthew G. Knepley .seealso: PetscBag, PetscBagGetName(), PetscBagSetName(), PetscBagCreate(), PetscBagGetData() 1042ffb7e86cSMatthew G. Knepley PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum() 1043ffb7e86cSMatthew G. Knepley @*/ 1044ffb7e86cSMatthew G. Knepley PetscErrorCode PetscBagGetNames(PetscBag bag, const char *names[]) 1045ffb7e86cSMatthew G. Knepley { 1046ffb7e86cSMatthew G. Knepley PetscBagItem nitem = bag->bagitems; 1047ffb7e86cSMatthew G. Knepley PetscInt n; 1048ffb7e86cSMatthew G. Knepley 1049ffb7e86cSMatthew G. Knepley PetscFunctionBegin; 1050ffb7e86cSMatthew G. Knepley for (n = 0; nitem; ++n, nitem = nitem->next) {names[n] = nitem->name;} 1051ffb7e86cSMatthew G. Knepley PetscFunctionReturn(0); 1052ffb7e86cSMatthew G. Knepley } 1053