xref: /petsc/src/sys/classes/bag/bag.c (revision 060da220a69df799affd088f0100c1f4dac789cb)
15c6c1daeSBarry Smith 
29bb5e83dSBarry Smith #include <petsc-private/bagimpl.h>     /*I  "petscbag.h"   I*/
3665c2dedSJed Brown #include <petscviewer.h>
45c6c1daeSBarry Smith 
55c6c1daeSBarry Smith #undef __FUNCT__
65c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegister_Private"
75c6c1daeSBarry Smith /*
85c6c1daeSBarry Smith       Adds item to the linked list in a bag
95c6c1daeSBarry Smith */
105c6c1daeSBarry Smith static PetscErrorCode PetscBagRegister_Private(PetscBag bag,PetscBagItem item,const char *name,const char *help)
115c6c1daeSBarry Smith {
125c6c1daeSBarry Smith   PetscErrorCode ierr;
135c6c1daeSBarry Smith 
145c6c1daeSBarry Smith   PetscFunctionBegin;
155c6c1daeSBarry Smith   ierr = PetscStrncpy(item->name,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
165c6c1daeSBarry Smith   ierr = PetscStrncpy(item->help,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr);
175c6c1daeSBarry Smith   if (!bag->bagitems) bag->bagitems = item;
185c6c1daeSBarry Smith   else {
195c6c1daeSBarry Smith     PetscBagItem nitem = bag->bagitems;
205c6c1daeSBarry Smith     while (nitem->next) {
215c6c1daeSBarry Smith       nitem = nitem->next;
225c6c1daeSBarry Smith     }
235c6c1daeSBarry Smith     nitem->next = item;
245c6c1daeSBarry Smith   }
255c6c1daeSBarry Smith   bag->count++;
265c6c1daeSBarry Smith   PetscFunctionReturn(0);
275c6c1daeSBarry Smith }
285c6c1daeSBarry Smith 
295c6c1daeSBarry Smith #undef __FUNCT__
305c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterEnum"
315c6c1daeSBarry Smith /*@C
325c6c1daeSBarry Smith    PetscBagRegisterEnum - add an enum value to the bag
335c6c1daeSBarry Smith 
345c6c1daeSBarry Smith    Logically Collective on PetscBag
355c6c1daeSBarry Smith 
365c6c1daeSBarry Smith    Input Parameter:
375c6c1daeSBarry Smith +  bag - the bag of values
385c6c1daeSBarry Smith .  addr - location of enum in struct
395c6c1daeSBarry Smith .  mdefault - the initial value
405c6c1daeSBarry Smith .  list - array of strings containing names of enum values followed by enum name followed by enum prefix
415c6c1daeSBarry Smith -  help - longer string with more information about the value
425c6c1daeSBarry Smith 
435c6c1daeSBarry Smith    Level: beginner
445c6c1daeSBarry Smith 
455c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
465c6c1daeSBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
475c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName()
485c6c1daeSBarry Smith 
495c6c1daeSBarry Smith @*/
505c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterEnum(PetscBag bag,void *addr,const char *const *list,PetscEnum mdefault, const char *name, const char *help)
515c6c1daeSBarry Smith {
525c6c1daeSBarry Smith   PetscErrorCode ierr;
535c6c1daeSBarry Smith   PetscBagItem   item;
545c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
555c6c1daeSBarry Smith   PetscBool      printhelp;
565c6c1daeSBarry Smith   PetscInt       i = 0;
575c6c1daeSBarry Smith 
585c6c1daeSBarry Smith   PetscFunctionBegin;
595c6c1daeSBarry Smith   nname[0] = '-';
605c6c1daeSBarry Smith   nname[1] = 0;
615c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
620298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
635c6c1daeSBarry Smith   if (printhelp) {
645c6c1daeSBarry Smith     while (list[i++]) ;
655c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <%s>: (%s) %s (choose one of) ",bag->bagprefix ? bag->bagprefix : "",name,list[mdefault],list[i-3],help);CHKERRQ(ierr);
665c6c1daeSBarry Smith     for (i=0; list[i+2]; i++) {
675c6c1daeSBarry Smith       ierr = (*PetscHelpPrintf)(bag->bagcomm," %s",list[i]);CHKERRQ(ierr);
685c6c1daeSBarry Smith     }
695c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"\n");CHKERRQ(ierr);
705c6c1daeSBarry Smith   }
710298fd71SBarry Smith   ierr = PetscOptionsGetEnum(bag->bagprefix,nname,list,&mdefault,NULL);CHKERRQ(ierr);
725c6c1daeSBarry Smith 
73b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
745c6c1daeSBarry Smith   item->dtype  = PETSC_ENUM;
755c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
765c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
775c6c1daeSBarry Smith   item->next        = 0;
785c6c1daeSBarry Smith   item->msize       = 1;
795c6c1daeSBarry Smith   ierr              = PetscStrArrayallocpy(list,(char***)&item->list);CHKERRQ(ierr);
805c6c1daeSBarry Smith   *(PetscEnum*)addr = mdefault;
815c6c1daeSBarry Smith   ierr              = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
825c6c1daeSBarry Smith   PetscFunctionReturn(0);
835c6c1daeSBarry Smith }
845c6c1daeSBarry Smith 
855c6c1daeSBarry Smith #undef __FUNCT__
865c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterIntArray"
875c6c1daeSBarry Smith /*@C
885c6c1daeSBarry Smith    PetscBagRegisterIntArray - add an integer value to the bag
895c6c1daeSBarry Smith 
905c6c1daeSBarry Smith    Logically Collective on PetscBag
915c6c1daeSBarry Smith 
925c6c1daeSBarry Smith    Input Parameter:
935c6c1daeSBarry Smith +  bag - the bag of values
945c6c1daeSBarry Smith .  addr - location of integer in struct
955c6c1daeSBarry Smith .  msize - number of entries in array
965c6c1daeSBarry Smith .  name - name of the integer array
975c6c1daeSBarry Smith -  help - longer string with more information about the value
985c6c1daeSBarry Smith 
995c6c1daeSBarry Smith    Level: beginner
1005c6c1daeSBarry Smith 
1015c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
1025c6c1daeSBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
1035c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
1045c6c1daeSBarry Smith 
1055c6c1daeSBarry Smith @*/
1065c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterIntArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help)
1075c6c1daeSBarry Smith {
1085c6c1daeSBarry Smith   PetscErrorCode ierr;
1095c6c1daeSBarry Smith   PetscBagItem   item;
1105c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
1115c6c1daeSBarry Smith   PetscBool      printhelp;
1125c6c1daeSBarry Smith   PetscInt       i,tmp = msize;
1135c6c1daeSBarry Smith 
1145c6c1daeSBarry Smith   PetscFunctionBegin;
1155c6c1daeSBarry Smith   /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/
1165c6c1daeSBarry Smith   nname[0] = '-';
1175c6c1daeSBarry Smith   nname[1] = 0;
1185c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
1190298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
1205c6c1daeSBarry Smith   if (printhelp) {
1215c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr);
1225c6c1daeSBarry Smith     for (i=0; i<msize; i++) {
1235c6c1daeSBarry Smith       ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr);
1245c6c1daeSBarry Smith     }
1255c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr);
1265c6c1daeSBarry Smith   }
1270298fd71SBarry Smith   ierr = PetscOptionsGetIntArray(bag->bagprefix,nname,(PetscInt*)addr,&tmp,NULL);CHKERRQ(ierr);
1285c6c1daeSBarry Smith 
129b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
1305c6c1daeSBarry Smith   item->dtype  = PETSC_INT;
1315c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
1325c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
1335c6c1daeSBarry Smith   item->next  = 0;
1345c6c1daeSBarry Smith   item->msize = msize;
1355c6c1daeSBarry Smith   ierr        = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
1365c6c1daeSBarry Smith   PetscFunctionReturn(0);
1375c6c1daeSBarry Smith }
1385c6c1daeSBarry Smith 
1395c6c1daeSBarry Smith #undef __FUNCT__
1405c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterRealArray"
1415c6c1daeSBarry Smith /*@C
1425c6c1daeSBarry Smith    PetscBagRegisterRealArray - add an real array to the bag
1435c6c1daeSBarry Smith 
1445c6c1daeSBarry Smith    Logically Collective on PetscBag
1455c6c1daeSBarry Smith 
1465c6c1daeSBarry Smith    Input Parameter:
1475c6c1daeSBarry Smith +  bag - the bag of values
1485c6c1daeSBarry Smith .  addr - location of real array in struct
1495c6c1daeSBarry Smith .  msize - number of entries in array
1505c6c1daeSBarry Smith .  name - name of the integer array
1515c6c1daeSBarry Smith -  help - longer string with more information about the value
1525c6c1daeSBarry Smith 
1535c6c1daeSBarry Smith    Level: beginner
1545c6c1daeSBarry Smith 
1555c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
1565c6c1daeSBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
1575c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
1585c6c1daeSBarry Smith 
1595c6c1daeSBarry Smith @*/
1605c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterRealArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help)
1615c6c1daeSBarry Smith {
1625c6c1daeSBarry Smith   PetscErrorCode ierr;
1635c6c1daeSBarry Smith   PetscBagItem   item;
1645c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
1655c6c1daeSBarry Smith   PetscBool      printhelp;
1665c6c1daeSBarry Smith   PetscInt       i,tmp = msize;
1675c6c1daeSBarry Smith 
1685c6c1daeSBarry Smith   PetscFunctionBegin;
1695c6c1daeSBarry Smith   /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/
1705c6c1daeSBarry Smith   nname[0] = '-';
1715c6c1daeSBarry Smith   nname[1] = 0;
1725c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
1730298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
1745c6c1daeSBarry Smith   if (printhelp) {
1755c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr);
1765c6c1daeSBarry Smith     for (i=0; i<msize; i++) {
17757622a8eSBarry Smith       ierr = (*PetscHelpPrintf)(bag->bagcomm,"%g ",(double)*((PetscReal*)addr)+i);CHKERRQ(ierr);
1785c6c1daeSBarry Smith     }
1795c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr);
1805c6c1daeSBarry Smith   }
1810298fd71SBarry Smith   ierr = PetscOptionsGetRealArray(bag->bagprefix,nname,(PetscReal*)addr,&tmp,NULL);CHKERRQ(ierr);
1825c6c1daeSBarry Smith 
183b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
1845c6c1daeSBarry Smith   item->dtype  = PETSC_REAL;
1855c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
1865c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
1875c6c1daeSBarry Smith   item->next  = 0;
1885c6c1daeSBarry Smith   item->msize = msize;
1895c6c1daeSBarry Smith   ierr        = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
1905c6c1daeSBarry Smith   PetscFunctionReturn(0);
1915c6c1daeSBarry Smith }
1925c6c1daeSBarry Smith 
1935c6c1daeSBarry Smith #undef __FUNCT__
1945c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterInt"
1955c6c1daeSBarry Smith /*@C
1965c6c1daeSBarry Smith    PetscBagRegisterInt - add an integer value to the bag
1975c6c1daeSBarry Smith 
1985c6c1daeSBarry Smith    Logically Collective on PetscBag
1995c6c1daeSBarry Smith 
2005c6c1daeSBarry Smith    Input Parameter:
2015c6c1daeSBarry Smith +  bag - the bag of values
2025c6c1daeSBarry Smith .  addr - location of integer in struct
2035c6c1daeSBarry Smith .  mdefault - the initial value
2045c6c1daeSBarry Smith .  name - name of the integer
2055c6c1daeSBarry Smith -  help - longer string with more information about the value
2065c6c1daeSBarry Smith 
2075c6c1daeSBarry Smith    Level: beginner
2085c6c1daeSBarry Smith 
2095c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
2100d349d43SBarry Smith            PetscBagRegister64bitInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
2115c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
2125c6c1daeSBarry Smith 
2135c6c1daeSBarry Smith @*/
2145c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterInt(PetscBag bag,void *addr,PetscInt mdefault,const char *name,const char *help)
2155c6c1daeSBarry Smith {
2165c6c1daeSBarry Smith   PetscErrorCode ierr;
2175c6c1daeSBarry Smith   PetscBagItem   item;
2185c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
2195c6c1daeSBarry Smith   PetscBool      printhelp;
2205c6c1daeSBarry Smith 
2215c6c1daeSBarry Smith   PetscFunctionBegin;
2225c6c1daeSBarry Smith   nname[0] = '-';
2235c6c1daeSBarry Smith   nname[1] = 0;
2245c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
2250298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
2265c6c1daeSBarry Smith   if (printhelp) {
2275c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr);
2285c6c1daeSBarry Smith   }
2290298fd71SBarry Smith   ierr = PetscOptionsGetInt(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr);
2305c6c1daeSBarry Smith 
231b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
2325c6c1daeSBarry Smith   item->dtype  = PETSC_INT;
2335c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
2345c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
2355c6c1daeSBarry Smith   item->next       = 0;
2365c6c1daeSBarry Smith   item->msize      = 1;
2375c6c1daeSBarry Smith   *(PetscInt*)addr = mdefault;
2385c6c1daeSBarry Smith   ierr             = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
2395c6c1daeSBarry Smith   PetscFunctionReturn(0);
2405c6c1daeSBarry Smith }
2415c6c1daeSBarry Smith 
2425c6c1daeSBarry Smith #undef __FUNCT__
2430d349d43SBarry Smith #define __FUNCT__ "PetscBagRegister64bitInt"
2440d349d43SBarry Smith /*@C
2450d349d43SBarry Smith    PetscBagRegister64bitInt - add an integer value to the bag
2460d349d43SBarry Smith 
2470d349d43SBarry Smith    Logically Collective on PetscBag
2480d349d43SBarry Smith 
2490d349d43SBarry Smith    Input Parameter:
2500d349d43SBarry Smith +  bag - the bag of values
2510d349d43SBarry Smith .  addr - location of integer in struct
2520d349d43SBarry Smith .  mdefault - the initial value
2530d349d43SBarry Smith .  name - name of the integer
2540d349d43SBarry Smith -  help - longer string with more information about the value
2550d349d43SBarry Smith 
2560d349d43SBarry Smith    Level: beginner
2570d349d43SBarry Smith 
2580d349d43SBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
2590d349d43SBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
2600d349d43SBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
2610d349d43SBarry Smith 
2620d349d43SBarry Smith @*/
2630d349d43SBarry Smith PetscErrorCode PetscBagRegister64bitInt(PetscBag bag,void *addr,Petsc64bitInt mdefault,const char *name,const char *help)
2640d349d43SBarry Smith {
2650d349d43SBarry Smith   PetscErrorCode ierr;
2660d349d43SBarry Smith   PetscBagItem   item;
2670d349d43SBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
2680d349d43SBarry Smith   PetscBool      printhelp;
2690d349d43SBarry Smith   PetscInt       odefault = (PetscInt)mdefault;
2700d349d43SBarry Smith   PetscBool      flg;
2710d349d43SBarry Smith 
2720d349d43SBarry Smith   PetscFunctionBegin;
2730d349d43SBarry Smith   nname[0] = '-';
2740d349d43SBarry Smith   nname[1] = 0;
2750d349d43SBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
2760d349d43SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
2770d349d43SBarry Smith   if (printhelp) {
2780d349d43SBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,odefault,help);CHKERRQ(ierr);
2790d349d43SBarry Smith   }
2800d349d43SBarry Smith   ierr = PetscOptionsGetInt(bag->bagprefix,nname,&odefault,&flg);CHKERRQ(ierr);
2810d349d43SBarry Smith   if (flg) mdefault = (Petsc64bitInt)odefault;
2820d349d43SBarry Smith 
2830d349d43SBarry Smith   ierr         = PetscNew(&item);CHKERRQ(ierr);
2840d349d43SBarry Smith   item->dtype  = PETSC_INT;
2850d349d43SBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
2860d349d43SBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
2870d349d43SBarry Smith   item->next       = 0;
2880d349d43SBarry Smith   item->msize      = 1;
2890d349d43SBarry Smith   *(Petsc64bitInt*)addr = mdefault;
2900d349d43SBarry Smith   ierr             = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
2910d349d43SBarry Smith   PetscFunctionReturn(0);
2920d349d43SBarry Smith }
2930d349d43SBarry Smith 
2940d349d43SBarry Smith #undef __FUNCT__
295dd66f111SBlaise Bourdin #define __FUNCT__ "PetscBagRegisterBoolArray"
296dd66f111SBlaise Bourdin /*@C
297dd66f111SBlaise Bourdin    PetscBagRegisterBoolArray - add a n logical values to the bag
298dd66f111SBlaise Bourdin 
299dd66f111SBlaise Bourdin    Logically Collective on PetscBag
300dd66f111SBlaise Bourdin 
301dd66f111SBlaise Bourdin    Input Parameter:
302dd66f111SBlaise Bourdin +  bag - the bag of values
303dd66f111SBlaise Bourdin .  addr - location of boolean array in struct
304dd66f111SBlaise Bourdin .  msize - number of entries in array
305dd66f111SBlaise Bourdin .  name - name of the boolean array
306dd66f111SBlaise Bourdin -  help - longer string with more information about the value
307dd66f111SBlaise Bourdin 
308dd66f111SBlaise Bourdin    Level: beginner
309dd66f111SBlaise Bourdin 
310dd66f111SBlaise Bourdin .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
311dd66f111SBlaise Bourdin            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
312dd66f111SBlaise Bourdin            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
313dd66f111SBlaise Bourdin 
314dd66f111SBlaise Bourdin @*/
315dd66f111SBlaise Bourdin PetscErrorCode PetscBagRegisterBoolArray(PetscBag bag,void *addr,PetscInt msize, const char* name, const char* help)
316dd66f111SBlaise Bourdin {
317dd66f111SBlaise Bourdin   PetscErrorCode ierr;
318dd66f111SBlaise Bourdin   PetscBagItem   item;
319dd66f111SBlaise Bourdin   char           nname[PETSC_BAG_NAME_LENGTH+1];
320dd66f111SBlaise Bourdin   PetscBool      printhelp;
321dd66f111SBlaise Bourdin   PetscInt       i,tmp = msize;
322dd66f111SBlaise Bourdin 
323dd66f111SBlaise Bourdin   PetscFunctionBegin;
324dd66f111SBlaise Bourdin   /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/
325dd66f111SBlaise Bourdin   nname[0] = '-';
326dd66f111SBlaise Bourdin   nname[1] = 0;
327dd66f111SBlaise Bourdin   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
328dd66f111SBlaise Bourdin   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
329dd66f111SBlaise Bourdin   if (printhelp) {
330dd66f111SBlaise Bourdin     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <",bag->bagprefix?bag->bagprefix:"",name);CHKERRQ(ierr);
331dd66f111SBlaise Bourdin     for (i=0; i<msize; i++) {
332dd66f111SBlaise Bourdin       ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr);
333dd66f111SBlaise Bourdin     }
334dd66f111SBlaise Bourdin     ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr);
335dd66f111SBlaise Bourdin   }
336dd66f111SBlaise Bourdin   ierr = PetscOptionsGetBoolArray(bag->bagprefix,nname,(PetscBool*)addr,&tmp,NULL);CHKERRQ(ierr);
337dd66f111SBlaise Bourdin 
338b00a9115SJed Brown   ierr = PetscNew(&item);CHKERRQ(ierr);
339dd66f111SBlaise Bourdin   item->dtype  = PETSC_BOOL;
340dd66f111SBlaise Bourdin   item->offset = ((char*)addr) - ((char*)bag);
341dd66f111SBlaise Bourdin   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
342dd66f111SBlaise Bourdin   item->next   = 0;
343dd66f111SBlaise Bourdin   item->msize  = msize;
344dd66f111SBlaise Bourdin   ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
345dd66f111SBlaise Bourdin   PetscFunctionReturn(0);
346dd66f111SBlaise Bourdin }
347dd66f111SBlaise Bourdin 
348dd66f111SBlaise Bourdin #undef __FUNCT__
3495c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterString"
3505c6c1daeSBarry Smith /*@C
3515c6c1daeSBarry Smith    PetscBagRegisterString - add a string value to the bag
3525c6c1daeSBarry Smith 
3535c6c1daeSBarry Smith    Logically Collective on PetscBag
3545c6c1daeSBarry Smith 
3555c6c1daeSBarry Smith    Input Parameter:
3565c6c1daeSBarry Smith +  bag - the bag of values
3575c6c1daeSBarry Smith .  addr - location of start of string in struct
3585c6c1daeSBarry Smith .  msize - length of the string space in the struct
3595c6c1daeSBarry Smith .  mdefault - the initial value
3605c6c1daeSBarry Smith .  name - name of the string
3615c6c1daeSBarry Smith -  help - longer string with more information about the value
3625c6c1daeSBarry Smith 
3635c6c1daeSBarry Smith    Level: beginner
3645c6c1daeSBarry Smith 
3655c6c1daeSBarry Smith    Note: The struct should have the field char mystring[msize]; not char *mystring
3665c6c1daeSBarry Smith 
3675c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
3685c6c1daeSBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
3695c6c1daeSBarry Smith            PetscBagSetFromOptions(),PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
3705c6c1daeSBarry Smith 
3715c6c1daeSBarry Smith @*/
3725c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterString(PetscBag bag,void *addr,PetscInt msize,const char* mdefault,const char* name,const char* help)
3735c6c1daeSBarry Smith {
3745c6c1daeSBarry Smith   PetscErrorCode ierr;
3755c6c1daeSBarry Smith   PetscBagItem   item;
3765c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
3775c6c1daeSBarry Smith   PetscBool      printhelp;
3785c6c1daeSBarry Smith 
3795c6c1daeSBarry Smith   PetscFunctionBegin;
3805c6c1daeSBarry Smith   nname[0] = '-';
3815c6c1daeSBarry Smith   nname[1] = 0;
3825c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
3830298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
3845c6c1daeSBarry Smith   if (printhelp) {
3855c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr);
3865c6c1daeSBarry Smith   }
3875c6c1daeSBarry Smith 
388b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
3895c6c1daeSBarry Smith   item->dtype  = PETSC_CHAR;
3905c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
3915c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
3925c6c1daeSBarry Smith   item->next  = 0;
3935c6c1daeSBarry Smith   item->msize = msize;
3945c6c1daeSBarry Smith   if (mdefault != (char*)addr) {
3955c6c1daeSBarry Smith     ierr = PetscStrncpy((char*)addr,mdefault,msize-1);CHKERRQ(ierr);
3965c6c1daeSBarry Smith   }
3970298fd71SBarry Smith   ierr = PetscOptionsGetString(bag->bagprefix,nname,(char*)addr,msize,NULL);CHKERRQ(ierr);
3985c6c1daeSBarry Smith   ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
3995c6c1daeSBarry Smith   PetscFunctionReturn(0);
4005c6c1daeSBarry Smith }
4015c6c1daeSBarry Smith 
4025c6c1daeSBarry Smith #undef __FUNCT__
4035c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterReal"
4045c6c1daeSBarry Smith /*@C
4055c6c1daeSBarry Smith    PetscBagRegisterReal - add a real value to the bag
4065c6c1daeSBarry Smith 
4075c6c1daeSBarry Smith    Logically Collective on PetscBag
4085c6c1daeSBarry Smith 
4095c6c1daeSBarry Smith    Input Parameter:
4105c6c1daeSBarry Smith +  bag - the bag of values
4115c6c1daeSBarry Smith .  addr - location of double in struct
4125c6c1daeSBarry Smith .  mdefault - the initial value
4135c6c1daeSBarry Smith .  name - name of the variable
4145c6c1daeSBarry Smith -  help - longer string with more information about the value
4155c6c1daeSBarry Smith 
4165c6c1daeSBarry Smith    Level: beginner
4175c6c1daeSBarry Smith 
4185c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
4195c6c1daeSBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
4205c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
4215c6c1daeSBarry Smith 
4225c6c1daeSBarry Smith @*/
4235c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterReal(PetscBag bag,void *addr,PetscReal mdefault, const char *name, const char *help)
4245c6c1daeSBarry Smith {
4255c6c1daeSBarry Smith   PetscErrorCode ierr;
4265c6c1daeSBarry Smith   PetscBagItem   item;
4275c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
4285c6c1daeSBarry Smith   PetscBool      printhelp;
4295c6c1daeSBarry Smith 
4305c6c1daeSBarry Smith   PetscFunctionBegin;
4315c6c1daeSBarry Smith   nname[0] = '-';
4325c6c1daeSBarry Smith   nname[1] = 0;
4335c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
4340298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
4355c6c1daeSBarry Smith   if (printhelp) {
43657622a8eSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <%g>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)mdefault,help);CHKERRQ(ierr);
4375c6c1daeSBarry Smith   }
4380298fd71SBarry Smith   ierr = PetscOptionsGetReal(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr);
4395c6c1daeSBarry Smith 
440b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
4415c6c1daeSBarry Smith   item->dtype  = PETSC_REAL;
4425c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
4435c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
4445c6c1daeSBarry Smith   item->next        = 0;
4455c6c1daeSBarry Smith   item->msize       = 1;
4465c6c1daeSBarry Smith   *(PetscReal*)addr = mdefault;
4475c6c1daeSBarry Smith   ierr              = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
4485c6c1daeSBarry Smith   PetscFunctionReturn(0);
4495c6c1daeSBarry Smith }
4505c6c1daeSBarry Smith 
4515c6c1daeSBarry Smith #undef __FUNCT__
4525c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterScalar"
4535c6c1daeSBarry Smith /*@C
4545c6c1daeSBarry Smith    PetscBagRegisterScalar - add a real or complex number value to the bag
4555c6c1daeSBarry Smith 
4565c6c1daeSBarry Smith    Logically Collective on PetscBag
4575c6c1daeSBarry Smith 
4585c6c1daeSBarry Smith    Input Parameter:
4595c6c1daeSBarry Smith +  bag - the bag of values
4605c6c1daeSBarry Smith .  addr - location of scalar in struct
4615c6c1daeSBarry Smith .  mdefault - the initial value
4625c6c1daeSBarry Smith .  name - name of the variable
4635c6c1daeSBarry Smith -  help - longer string with more information about the value
4645c6c1daeSBarry Smith 
4655c6c1daeSBarry Smith 
4665c6c1daeSBarry Smith    Level: beginner
4675c6c1daeSBarry Smith 
4685c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
4695c6c1daeSBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
4705c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
4715c6c1daeSBarry Smith 
4725c6c1daeSBarry Smith @*/
4735c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterScalar(PetscBag bag,void *addr,PetscScalar mdefault,const char *name,const char *help)
4745c6c1daeSBarry Smith {
4755c6c1daeSBarry Smith   PetscErrorCode ierr;
4765c6c1daeSBarry Smith   PetscBagItem   item;
4775c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
4785c6c1daeSBarry Smith   PetscBool      printhelp;
4795c6c1daeSBarry Smith 
4805c6c1daeSBarry Smith   PetscFunctionBegin;
4815c6c1daeSBarry Smith   nname[0] = '-';
4825c6c1daeSBarry Smith   nname[1] = 0;
4835c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
4840298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
4855c6c1daeSBarry Smith   if (printhelp) {
48657622a8eSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <%g + %gi>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)PetscRealPart(mdefault),(double)PetscImaginaryPart(mdefault),help);CHKERRQ(ierr);
4875c6c1daeSBarry Smith   }
4880298fd71SBarry Smith   ierr = PetscOptionsGetScalar(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr);
4895c6c1daeSBarry Smith 
490b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
4915c6c1daeSBarry Smith   item->dtype  = PETSC_SCALAR;
4925c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
4935c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
4945c6c1daeSBarry Smith   item->next          = 0;
4955c6c1daeSBarry Smith   item->msize         = 1;
4965c6c1daeSBarry Smith   *(PetscScalar*)addr = mdefault;
4975c6c1daeSBarry Smith   ierr                = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
4985c6c1daeSBarry Smith   PetscFunctionReturn(0);
4995c6c1daeSBarry Smith }
5005c6c1daeSBarry Smith 
5015c6c1daeSBarry Smith #undef __FUNCT__
5025c6c1daeSBarry Smith #define __FUNCT__ "PetscBagRegisterBool"
5035c6c1daeSBarry Smith /*@C
5045c6c1daeSBarry Smith    PetscBagRegisterBool - add a logical value to the bag
5055c6c1daeSBarry Smith 
5065c6c1daeSBarry Smith    Logically Collective on PetscBag
5075c6c1daeSBarry Smith 
5085c6c1daeSBarry Smith    Input Parameter:
5095c6c1daeSBarry Smith +  bag - the bag of values
5105c6c1daeSBarry Smith .  addr - location of logical in struct
5115c6c1daeSBarry Smith .  mdefault - the initial value
5125c6c1daeSBarry Smith .  name - name of the variable
5135c6c1daeSBarry Smith -  help - longer string with more information about the value
5145c6c1daeSBarry Smith 
5155c6c1daeSBarry Smith 
5165c6c1daeSBarry Smith    Level: beginner
5175c6c1daeSBarry Smith 
5185c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
5195c6c1daeSBarry Smith            PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
5205c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
5215c6c1daeSBarry Smith 
5225c6c1daeSBarry Smith @*/
5235c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterBool(PetscBag bag,void *addr,PetscBool mdefault,const char *name,const char *help)
5245c6c1daeSBarry Smith {
5255c6c1daeSBarry Smith   PetscErrorCode ierr;
5265c6c1daeSBarry Smith   PetscBagItem   item;
5275c6c1daeSBarry Smith   char           nname[PETSC_BAG_NAME_LENGTH+1];
5285c6c1daeSBarry Smith   PetscBool      printhelp;
5295c6c1daeSBarry Smith 
5305c6c1daeSBarry Smith   PetscFunctionBegin;
5315c6c1daeSBarry Smith   /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */
5325c6c1daeSBarry Smith   if (mdefault != PETSC_FALSE && mdefault != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Boolean %s %s must be boolean; integer value %d",name,help,(int)mdefault);
5335c6c1daeSBarry Smith   nname[0] = '-';
5345c6c1daeSBarry Smith   nname[1] = 0;
5355c6c1daeSBarry Smith   ierr     = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
5360298fd71SBarry Smith   ierr     = PetscOptionsHasName(NULL,"-help",&printhelp);CHKERRQ(ierr);
5375c6c1daeSBarry Smith   if (printhelp) {
5385c6c1daeSBarry Smith     ierr = (*PetscHelpPrintf)(bag->bagcomm,"  -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,PetscBools[mdefault],help);CHKERRQ(ierr);
5395c6c1daeSBarry Smith   }
5400298fd71SBarry Smith   ierr = PetscOptionsGetBool(bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr);
5415c6c1daeSBarry Smith 
542b00a9115SJed Brown   ierr         = PetscNew(&item);CHKERRQ(ierr);
5435c6c1daeSBarry Smith   item->dtype  = PETSC_BOOL;
5445c6c1daeSBarry Smith   item->offset = ((char*)addr) - ((char*)bag);
5455c6c1daeSBarry Smith   if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help);
5465c6c1daeSBarry Smith   item->next        = 0;
5475c6c1daeSBarry Smith   item->msize       = 1;
5485c6c1daeSBarry Smith   *(PetscBool*)addr = mdefault;
5495c6c1daeSBarry Smith   ierr              = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr);
5505c6c1daeSBarry Smith   PetscFunctionReturn(0);
5515c6c1daeSBarry Smith }
5525c6c1daeSBarry Smith 
5535c6c1daeSBarry Smith #undef __FUNCT__
5545c6c1daeSBarry Smith #define __FUNCT__ "PetscBagDestroy"
5555c6c1daeSBarry Smith /*@C
5565c6c1daeSBarry Smith    PetscBagDestroy - Destroys a bag values
5575c6c1daeSBarry Smith 
5585c6c1daeSBarry Smith    Collective on PetscBag
5595c6c1daeSBarry Smith 
5605c6c1daeSBarry Smith    Input Parameter:
5615c6c1daeSBarry Smith .  bag - the bag of values
5625c6c1daeSBarry Smith 
5635c6c1daeSBarry Smith    Level: beginner
5645c6c1daeSBarry Smith 
5655c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
5665c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
5675c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
5685c6c1daeSBarry Smith 
5695c6c1daeSBarry Smith @*/
5705c6c1daeSBarry Smith PetscErrorCode  PetscBagDestroy(PetscBag *bag)
5715c6c1daeSBarry Smith {
5725c6c1daeSBarry Smith   PetscErrorCode ierr;
5735c6c1daeSBarry Smith   PetscBagItem   nitem = (*bag)->bagitems,item;
5745c6c1daeSBarry Smith 
5755c6c1daeSBarry Smith   PetscFunctionBegin;
5765c6c1daeSBarry Smith   while (nitem) {
5775c6c1daeSBarry Smith     item = nitem->next;
5785c6c1daeSBarry Smith     if (nitem->list) {
5795c6c1daeSBarry Smith       ierr = PetscStrArrayDestroy(&nitem->list);CHKERRQ(ierr);
5805c6c1daeSBarry Smith     }
5815c6c1daeSBarry Smith     ierr  = PetscFree(nitem);CHKERRQ(ierr);
5825c6c1daeSBarry Smith     nitem = item;
5835c6c1daeSBarry Smith   }
5845c6c1daeSBarry Smith   if ((*bag)->bagprefix) { ierr = PetscFree((*bag)->bagprefix);CHKERRQ(ierr); }
5855c6c1daeSBarry Smith   ierr = PetscFree(*bag);CHKERRQ(ierr);
5865c6c1daeSBarry Smith   PetscFunctionReturn(0);
5875c6c1daeSBarry Smith }
5885c6c1daeSBarry Smith 
5895c6c1daeSBarry Smith #undef __FUNCT__
5905c6c1daeSBarry Smith #define __FUNCT__ "PetscBagSetFromOptions"
5915c6c1daeSBarry Smith /*@
5925c6c1daeSBarry Smith    PetscBagSetFromOptions - Allows setting options from a bag
5935c6c1daeSBarry Smith 
5945c6c1daeSBarry Smith    Collective on PetscBag
5955c6c1daeSBarry Smith 
5965c6c1daeSBarry Smith    Input Parameter:
5975c6c1daeSBarry Smith .  bag - the bag of values
5985c6c1daeSBarry Smith 
5995c6c1daeSBarry Smith    Level: beginner
6005c6c1daeSBarry Smith 
6015c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData()
6025c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
6035c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagView(), PetscBagRegisterEnum()
6045c6c1daeSBarry Smith 
6055c6c1daeSBarry Smith @*/
6065c6c1daeSBarry Smith PetscErrorCode  PetscBagSetFromOptions(PetscBag bag)
6075c6c1daeSBarry Smith {
6085c6c1daeSBarry Smith   PetscErrorCode ierr;
6095c6c1daeSBarry Smith   PetscBagItem   nitem = bag->bagitems;
6105c6c1daeSBarry Smith   char           name[PETSC_BAG_NAME_LENGTH+1],helpname[PETSC_BAG_NAME_LENGTH+PETSC_BAG_HELP_LENGTH+3];
6115c6c1daeSBarry Smith   PetscInt       n;
6125c6c1daeSBarry Smith 
6135c6c1daeSBarry Smith   PetscFunctionBegin;
6145c6c1daeSBarry Smith   ierr = PetscStrcpy(helpname,bag->bagname);CHKERRQ(ierr);
6155c6c1daeSBarry Smith   ierr = PetscStrcat(helpname," ");CHKERRQ(ierr);
6165c6c1daeSBarry Smith   ierr = PetscStrcat(helpname,bag->baghelp);CHKERRQ(ierr);
6175c6c1daeSBarry Smith   ierr = PetscOptionsBegin(bag->bagcomm,bag->bagprefix,helpname,0);
6185c6c1daeSBarry Smith   while (nitem) {
6195c6c1daeSBarry Smith     name[0] = '-';
6205c6c1daeSBarry Smith     name[1] = 0;
6215c6c1daeSBarry Smith     ierr    = PetscStrcat(name,nitem->name);CHKERRQ(ierr);
6225c6c1daeSBarry Smith     if (nitem->dtype == PETSC_CHAR) {   /* special handling for fortran required? [due to space padding vs null termination] */
6235c6c1daeSBarry Smith       char *value = (char*)(((char*)bag) + nitem->offset);
6240298fd71SBarry Smith       ierr = PetscOptionsString(name,nitem->help,"",value,value,nitem->msize,NULL);CHKERRQ(ierr);
6255c6c1daeSBarry Smith     } else if (nitem->dtype == PETSC_REAL) {
6265c6c1daeSBarry Smith       PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset);
6275c6c1daeSBarry Smith       if (nitem->msize == 1) {
6280298fd71SBarry Smith         ierr = PetscOptionsReal(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr);
6295c6c1daeSBarry Smith       } else {
6305c6c1daeSBarry Smith         n    = nitem->msize;
6310298fd71SBarry Smith         ierr = PetscOptionsRealArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr);
6325c6c1daeSBarry Smith       }
6335c6c1daeSBarry Smith     } else if (nitem->dtype == PETSC_SCALAR) {
6345c6c1daeSBarry Smith       PetscScalar *value = (PetscScalar*)(((char*)bag) + nitem->offset);
6350298fd71SBarry Smith       ierr = PetscOptionsScalar(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr);
6365c6c1daeSBarry Smith     } else if (nitem->dtype == PETSC_INT) {
6375c6c1daeSBarry Smith       PetscInt *value = (PetscInt*)(((char*)bag) + nitem->offset);
6385c6c1daeSBarry Smith       if (nitem->msize == 1) {
6390298fd71SBarry Smith         ierr = PetscOptionsInt(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr);
6405c6c1daeSBarry Smith       } else {
6415c6c1daeSBarry Smith         n    = nitem->msize;
6420298fd71SBarry Smith         ierr = PetscOptionsIntArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr);
6435c6c1daeSBarry Smith       }
6445c6c1daeSBarry Smith     } else if (nitem->dtype == PETSC_ENUM) {
6455c6c1daeSBarry Smith       PetscEnum *value = (PetscEnum*)(((char*)bag) + nitem->offset);
6465c6c1daeSBarry Smith       PetscInt  i      = 0;
6475c6c1daeSBarry Smith       while (nitem->list[i++]) ;
6480298fd71SBarry Smith       ierr = PetscOptionsEnum(name,nitem->help,nitem->list[i-3],(const char*const*)nitem->list,*value,value,NULL);CHKERRQ(ierr);
6495c6c1daeSBarry Smith     } else if (nitem->dtype == PETSC_BOOL) {
6505c6c1daeSBarry Smith       PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset);
651dd66f111SBlaise Bourdin       if (nitem->msize == 1) {
6520298fd71SBarry Smith         ierr = PetscOptionsBool(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr);
653dd66f111SBlaise Bourdin       } else {
654dd66f111SBlaise Bourdin         n = nitem->msize;
655dd66f111SBlaise Bourdin         ierr = PetscOptionsBoolArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr);
656dd66f111SBlaise Bourdin       }
6575c6c1daeSBarry Smith     }
6585c6c1daeSBarry Smith     nitem = nitem->next;
6595c6c1daeSBarry Smith   }
6605c6c1daeSBarry Smith   PetscOptionsEnd();
6615c6c1daeSBarry Smith   PetscFunctionReturn(0);
6625c6c1daeSBarry Smith }
6635c6c1daeSBarry Smith 
6645c6c1daeSBarry Smith #undef __FUNCT__
6655c6c1daeSBarry Smith #define __FUNCT__ "PetscBagView"
6665c6c1daeSBarry Smith /*@C
6675c6c1daeSBarry Smith    PetscBagView - Views a bag of values as either ASCII text or a binary file
6685c6c1daeSBarry Smith 
6695c6c1daeSBarry Smith    Collective on PetscBag
6705c6c1daeSBarry Smith 
6715c6c1daeSBarry Smith    Input Parameter:
6725c6c1daeSBarry Smith +  bag - the bag of values
6735c6c1daeSBarry Smith -  viewer - location to view the values
6745c6c1daeSBarry Smith 
6755c6c1daeSBarry Smith    Level: beginner
6765c6c1daeSBarry Smith 
6775c6c1daeSBarry Smith    Warning: Currently PETSc bags saved in a binary file can only be read back
6785c6c1daeSBarry Smith      in on a machine of the same architecture. Let us know when this is a problem
6795c6c1daeSBarry Smith      and we'll fix it.
6805c6c1daeSBarry Smith 
6815c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData()
6825c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum()
6835c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName()
6845c6c1daeSBarry Smith 
6855c6c1daeSBarry Smith @*/
6865c6c1daeSBarry Smith PetscErrorCode  PetscBagView(PetscBag bag,PetscViewer view)
6875c6c1daeSBarry Smith {
6885c6c1daeSBarry Smith   PetscBool      isascii,isbinary;
6895c6c1daeSBarry Smith   PetscErrorCode ierr;
6905c6c1daeSBarry Smith   PetscBagItem   nitem = bag->bagitems;
6915c6c1daeSBarry Smith 
6925c6c1daeSBarry Smith   PetscFunctionBegin;
6935c6c1daeSBarry Smith   ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr);
6945c6c1daeSBarry Smith   ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
6955c6c1daeSBarry Smith   if (isascii) {
6963ffde785SBarry Smith     if (bag->bagprefix) {
6973ffde785SBarry Smith       ierr = PetscViewerASCIIPrintf(view,"PetscBag Object:  %s (%s) %s\n",bag->bagname,bag->bagprefix,bag->baghelp);CHKERRQ(ierr);
6983ffde785SBarry Smith     } else {
6995c6c1daeSBarry Smith       ierr = PetscViewerASCIIPrintf(view,"PetscBag Object:  %s %s\n",bag->bagname,bag->baghelp);CHKERRQ(ierr);
7003ffde785SBarry Smith     }
7015c6c1daeSBarry Smith     while (nitem) {
7025c6c1daeSBarry Smith       if (nitem->dtype == PETSC_CHAR) {
7035c6c1daeSBarry Smith         char *value = (char*)(((char*)bag) + nitem->offset);
7045c6c1daeSBarry Smith         char tmp    = value[nitem->msize-1]; /* special handling for fortran chars wihout null terminator */
7055c6c1daeSBarry Smith         value[nitem->msize-1] =0;
7065c6c1daeSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"  %s = %s; %s\n",nitem->name,value,nitem->help);CHKERRQ(ierr);
7075c6c1daeSBarry Smith         value[nitem->msize-1] = tmp;
7085c6c1daeSBarry Smith       } else if (nitem->dtype == PETSC_REAL) {
7095c6c1daeSBarry Smith         PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset);
7105c6c1daeSBarry Smith         PetscInt  i;
7115c6c1daeSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"  %s = ",nitem->name);CHKERRQ(ierr);
7125c6c1daeSBarry Smith         for (i=0; i<nitem->msize; i++) {
71357622a8eSBarry Smith           ierr = PetscViewerASCIIPrintf(view,"%g ",(double)value[i]);CHKERRQ(ierr);
7145c6c1daeSBarry Smith         }
7155c6c1daeSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr);
7165c6c1daeSBarry Smith       } else if (nitem->dtype == PETSC_SCALAR) {
7175c6c1daeSBarry Smith         PetscScalar value = *(PetscScalar*)(((char*)bag) + nitem->offset);
7185c6c1daeSBarry Smith #if defined(PETSC_USE_COMPLEX)
71957622a8eSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"  %s = %g + %gi; %s\n",nitem->name,(double)PetscRealPart(value),(double)PetscImaginaryPart(value),nitem->help);CHKERRQ(ierr);
7205c6c1daeSBarry Smith #else
72157622a8eSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"  %s = %g; %s\n",nitem->name,(double)value,nitem->help);CHKERRQ(ierr);
7225c6c1daeSBarry Smith #endif
7235c6c1daeSBarry Smith       } else if (nitem->dtype == PETSC_INT) {
7245c6c1daeSBarry Smith         PetscInt i,*value = (PetscInt*)(((char*)bag) + nitem->offset);
7255c6c1daeSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"  %s = ",nitem->name);CHKERRQ(ierr);
7265c6c1daeSBarry Smith         for (i=0; i<nitem->msize; i++) {
7275c6c1daeSBarry Smith           ierr = PetscViewerASCIIPrintf(view,"%D ",value[i]);CHKERRQ(ierr);
7285c6c1daeSBarry Smith         }
7295c6c1daeSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr);
7305c6c1daeSBarry Smith       } else if (nitem->dtype == PETSC_BOOL) {
731dd66f111SBlaise Bourdin         PetscBool  *value = (PetscBool*)(((char*)bag) + nitem->offset);
732dd66f111SBlaise Bourdin         PetscInt  i;
7335c6c1daeSBarry Smith          /* some Fortran compilers use -1 as boolean */
734dd66f111SBlaise Bourdin         ierr = PetscViewerASCIIPrintf(view,"  %s = ",nitem->name);CHKERRQ(ierr);
735dd66f111SBlaise Bourdin         for (i=0; i<nitem->msize; i++) {
736dd66f111SBlaise Bourdin           if (((int) value[i]) == -1) value[i] = PETSC_TRUE;
7375c6c1daeSBarry Smith           /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */
738dd66f111SBlaise Bourdin           if (value[i] != PETSC_FALSE && value[i] != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Boolean value for %s %s is corrupt; integer value %d",nitem->name,nitem->help,value);
739dd66f111SBlaise Bourdin           ierr = PetscViewerASCIIPrintf(view," %s",PetscBools[value[i]]);CHKERRQ(ierr);
740dd66f111SBlaise Bourdin         }
741dd66f111SBlaise Bourdin         ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr);
7425c6c1daeSBarry Smith       } else if (nitem->dtype == PETSC_ENUM) {
7435c6c1daeSBarry Smith         PetscEnum value = *(PetscEnum*)(((char*)bag) + nitem->offset);
7445c6c1daeSBarry Smith         PetscInt  i     = 0;
7455c6c1daeSBarry Smith         while (nitem->list[i++]) ;
7465c6c1daeSBarry Smith         ierr = PetscViewerASCIIPrintf(view,"  %s = %s; (%s) %s\n",nitem->name,nitem->list[value],nitem->list[i-3],nitem->help);CHKERRQ(ierr);
7475c6c1daeSBarry Smith       }
7485c6c1daeSBarry Smith       nitem = nitem->next;
7495c6c1daeSBarry Smith     }
7505c6c1daeSBarry Smith   } else if (isbinary) {
7515c6c1daeSBarry Smith     PetscInt          classid           = PETSC_BAG_FILE_CLASSID, dtype;
7525c6c1daeSBarry Smith     PetscInt          deprecatedbagsize = 0;
753a261c58fSBarry Smith     PetscViewerFormat format;
7545c6c1daeSBarry Smith     ierr = PetscViewerBinaryWrite(view,&classid,1,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr);
7555c6c1daeSBarry Smith     ierr = PetscViewerBinaryWrite(view,&deprecatedbagsize,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr);
7565c6c1daeSBarry Smith     ierr = PetscViewerBinaryWrite(view,&bag->count,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr);
7575c6c1daeSBarry Smith     ierr = PetscViewerBinaryWrite(view,bag->bagname,PETSC_BAG_NAME_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr);
7585c6c1daeSBarry Smith     ierr = PetscViewerBinaryWrite(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr);
7595c6c1daeSBarry Smith     while (nitem) {
7605c6c1daeSBarry Smith       ierr  = PetscViewerBinaryWrite(view,&nitem->offset,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr);
7615c6c1daeSBarry Smith       dtype = (PetscInt)nitem->dtype;
7625c6c1daeSBarry Smith       ierr  = PetscViewerBinaryWrite(view,&dtype,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr);
7635c6c1daeSBarry Smith       ierr  = PetscViewerBinaryWrite(view,nitem->name,PETSC_BAG_NAME_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr);
7645c6c1daeSBarry Smith       ierr  = PetscViewerBinaryWrite(view,nitem->help,PETSC_BAG_HELP_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr);
7655c6c1daeSBarry Smith       ierr  = PetscViewerBinaryWrite(view,&nitem->msize,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr);
7665c6c1daeSBarry Smith       /* some Fortran compilers use -1 as boolean */
7675c6c1daeSBarry Smith       if (dtype == PETSC_BOOL && ((*(int*) (((char*)bag) + nitem->offset) == -1))) *(int*) (((char*)bag) + nitem->offset) = PETSC_TRUE;
7685c6c1daeSBarry Smith 
7695c6c1daeSBarry Smith       ierr = PetscViewerBinaryWrite(view,(((char*)bag) + nitem->offset),nitem->msize,nitem->dtype,PETSC_FALSE);CHKERRQ(ierr);
7705c6c1daeSBarry Smith       if (dtype == PETSC_ENUM) {
7715c6c1daeSBarry Smith         ierr = PetscViewerBinaryWriteStringArray(view,(char**)nitem->list);CHKERRQ(ierr);
7725c6c1daeSBarry Smith       }
7735c6c1daeSBarry Smith       nitem = nitem->next;
7745c6c1daeSBarry Smith     }
775a261c58fSBarry Smith     ierr = PetscViewerGetFormat(view,&format);CHKERRQ(ierr);
776a261c58fSBarry Smith     if (format == PETSC_VIEWER_BINARY_MATLAB) {
777a261c58fSBarry Smith       MPI_Comm comm;
778a261c58fSBarry Smith       FILE     *info;
779a261c58fSBarry Smith       ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr);
780a261c58fSBarry Smith       ierr = PetscViewerBinaryGetInfoPointer(view,&info);CHKERRQ(ierr);
781da88d4d4SJed Brown       ierr = PetscFPrintf(comm,info,"#--- begin code written by PetscViewerBinary for MATLAB format ---#\n");CHKERRQ(ierr);
782da88d4d4SJed Brown       ierr = PetscFPrintf(comm,info,"#$$ Set.%s = PetscBinaryRead(fd);\n",bag->bagname);CHKERRQ(ierr);
783da88d4d4SJed Brown       ierr = PetscFPrintf(comm,info,"#--- end code written by PetscViewerBinary for MATLAB format ---#\n\n");CHKERRQ(ierr);
784a261c58fSBarry Smith     }
785a261c58fSBarry Smith   }
7865c6c1daeSBarry Smith   PetscFunctionReturn(0);
7875c6c1daeSBarry Smith }
7885c6c1daeSBarry Smith 
7895c6c1daeSBarry Smith #undef __FUNCT__
7905c6c1daeSBarry Smith #define __FUNCT__ "PetscBagLoad"
7915c6c1daeSBarry Smith /*@C
7925c6c1daeSBarry Smith    PetscBagLoad - Loads a bag of values from a binary file
7935c6c1daeSBarry Smith 
7945c6c1daeSBarry Smith    Collective on PetscViewer
7955c6c1daeSBarry Smith 
7965c6c1daeSBarry Smith    Input Parameter:
7975c6c1daeSBarry Smith +  viewer - file to load values from
7985c6c1daeSBarry Smith -  bag - the bag of values
7995c6c1daeSBarry Smith 
8005c6c1daeSBarry Smith    Notes: You must have created and registered all the fields in the bag before loading into it.
8015c6c1daeSBarry Smith 
8025c6c1daeSBarry Smith    Notes:
8035c6c1daeSBarry Smith    Level: beginner
8045c6c1daeSBarry Smith 
8055c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagView(), PetscBagGetData()
8065c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
8075c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum()
8085c6c1daeSBarry Smith 
8095c6c1daeSBarry Smith @*/
8105c6c1daeSBarry Smith PetscErrorCode  PetscBagLoad(PetscViewer view,PetscBag bag)
8115c6c1daeSBarry Smith {
8125c6c1daeSBarry Smith   PetscErrorCode ierr;
8135c6c1daeSBarry Smith   PetscBool      isbinary;
814*060da220SMatthew G. Knepley   PetscInt       classid,bagcount,i,dtype,msize,offset,deprecatedbagsize;
8155c6c1daeSBarry Smith   char           name[PETSC_BAG_NAME_LENGTH],help[PETSC_BAG_HELP_LENGTH],**list;
8165c6c1daeSBarry Smith   PetscBagItem   nitem;
8175c6c1daeSBarry Smith   MPI_Comm       comm;
8185c6c1daeSBarry Smith   PetscMPIInt    flag;
8195c6c1daeSBarry Smith 
8205c6c1daeSBarry Smith   PetscFunctionBegin;
8215c6c1daeSBarry Smith   ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr);
8225c6c1daeSBarry Smith   ierr = MPI_Comm_compare(comm,bag->bagcomm,&flag);CHKERRQ(ierr);
8235c6c1daeSBarry Smith   if (flag != MPI_CONGRUENT && flag != MPI_IDENT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"Different communicators in the viewer and bag"); \
8245c6c1daeSBarry Smith   ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
8255c6c1daeSBarry Smith   if (!isbinary) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for this viewer type");
8265c6c1daeSBarry Smith 
827*060da220SMatthew G. Knepley   ierr = PetscViewerBinaryRead(view,&classid,1,NULL,PETSC_INT);CHKERRQ(ierr);
8285c6c1daeSBarry Smith   if (classid != PETSC_BAG_FILE_CLASSID) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not PetscBag next in binary file");
829*060da220SMatthew G. Knepley   ierr = PetscViewerBinaryRead(view,&deprecatedbagsize,1,NULL,PETSC_INT);CHKERRQ(ierr);
830*060da220SMatthew G. Knepley   ierr = PetscViewerBinaryRead(view,&bagcount,1,NULL,PETSC_INT);CHKERRQ(ierr);
8315c6c1daeSBarry Smith   if (bagcount != bag->count) SETERRQ2(comm,PETSC_ERR_ARG_INCOMP,"Bag in file has different number of entries %d then passed in bag %d\n",(int)bagcount,(int)bag->count);CHKERRQ(ierr);
832*060da220SMatthew G. Knepley   ierr = PetscViewerBinaryRead(view,bag->bagname,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr);
833*060da220SMatthew G. Knepley   ierr = PetscViewerBinaryRead(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr);
8345c6c1daeSBarry Smith 
8355c6c1daeSBarry Smith   nitem = bag->bagitems;
8365c6c1daeSBarry Smith   for (i=0; i<bagcount; i++) {
837*060da220SMatthew G. Knepley     ierr = PetscViewerBinaryRead(view,&offset,1,NULL,PETSC_INT);CHKERRQ(ierr);
8385c6c1daeSBarry Smith     /* ignore the offset in the file */
839*060da220SMatthew G. Knepley     ierr = PetscViewerBinaryRead(view,&dtype,1,NULL,PETSC_INT);CHKERRQ(ierr);
840*060da220SMatthew G. Knepley     ierr = PetscViewerBinaryRead(view,name,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr);
841*060da220SMatthew G. Knepley     ierr = PetscViewerBinaryRead(view,help,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr);
842*060da220SMatthew G. Knepley     ierr = PetscViewerBinaryRead(view,&msize,1,NULL,PETSC_INT);CHKERRQ(ierr);
8435c6c1daeSBarry Smith 
8445c6c1daeSBarry Smith     if (dtype == (PetscInt) PETSC_CHAR) {
845*060da220SMatthew G. Knepley       ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_CHAR);CHKERRQ(ierr);
8465c6c1daeSBarry Smith     } else if (dtype == (PetscInt) PETSC_REAL) {
847*060da220SMatthew G. Knepley       ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_REAL);CHKERRQ(ierr);
8485c6c1daeSBarry Smith     } else if (dtype == (PetscInt) PETSC_SCALAR) {
849*060da220SMatthew G. Knepley       ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_SCALAR);CHKERRQ(ierr);
8505c6c1daeSBarry Smith     } else if (dtype == (PetscInt) PETSC_INT) {
851*060da220SMatthew G. Knepley       ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_INT);CHKERRQ(ierr);
8525c6c1daeSBarry Smith     } else if (dtype == (PetscInt) PETSC_BOOL) {
853*060da220SMatthew G. Knepley       ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_BOOL);CHKERRQ(ierr);
8545c6c1daeSBarry Smith     } else if (dtype == (PetscInt) PETSC_ENUM) {
855*060da220SMatthew G. Knepley       ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_ENUM);CHKERRQ(ierr);
8565c6c1daeSBarry Smith       ierr = PetscViewerBinaryReadStringArray(view,&list);CHKERRQ(ierr);
8575c6c1daeSBarry Smith       /* don't need to save list because it is already registered in the bag */
8585c6c1daeSBarry Smith       ierr = PetscFree(list);CHKERRQ(ierr);
8595c6c1daeSBarry Smith     }
8605c6c1daeSBarry Smith     nitem = nitem->next;
8615c6c1daeSBarry Smith   }
8625c6c1daeSBarry Smith   PetscFunctionReturn(0);
8635c6c1daeSBarry Smith }
8645c6c1daeSBarry Smith 
8655c6c1daeSBarry Smith #undef __FUNCT__
8665c6c1daeSBarry Smith #define __FUNCT__ "PetscBagCreate"
8675c6c1daeSBarry Smith /*@
8685c6c1daeSBarry Smith     PetscBagCreate - Create a bag of values
8695c6c1daeSBarry Smith 
8705c6c1daeSBarry Smith   Collective on MPI_Comm
8715c6c1daeSBarry Smith 
8725c6c1daeSBarry Smith   Level: Intermediate
8735c6c1daeSBarry Smith 
8745c6c1daeSBarry Smith   Input Parameters:
8755c6c1daeSBarry Smith +  comm - communicator to share bag
8765c6c1daeSBarry Smith -  bagsize - size of the C structure holding the values
8775c6c1daeSBarry Smith 
8785c6c1daeSBarry Smith   Output Parameter:
8795c6c1daeSBarry Smith .   bag - the bag of values
8805c6c1daeSBarry Smith 
8815c6c1daeSBarry Smith    Notes:
8825c6c1daeSBarry Smith       The size of the A struct must be small enough to fit in a PetscInt; by default
8835c6c1daeSBarry Smith       PetscInt is 4 bytes; this means a bag cannot be larger than 2 gigabytes in length.
8845c6c1daeSBarry Smith       The warning about casting to a shorter length can be ignored below unless your A struct is too large
8855c6c1daeSBarry Smith 
8865c6c1daeSBarry Smith .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
8875c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
8885c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum()
8895c6c1daeSBarry Smith @*/
8905c6c1daeSBarry Smith PetscErrorCode PetscBagCreate(MPI_Comm comm, size_t bagsize, PetscBag *bag)
8915c6c1daeSBarry Smith {
8925c6c1daeSBarry Smith   PetscErrorCode ierr;
8935c6c1daeSBarry Smith   size_t         totalsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar);
8945c6c1daeSBarry Smith 
8955c6c1daeSBarry Smith   PetscFunctionBegin;
8960298fd71SBarry Smith   ierr = PetscInfo1(NULL,"Creating Bag with total size %d\n",(int)totalsize);CHKERRQ(ierr);
8975c6c1daeSBarry Smith   ierr = PetscMalloc(totalsize,bag);CHKERRQ(ierr);
8985c6c1daeSBarry Smith   ierr = PetscMemzero(*bag,bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar));CHKERRQ(ierr);
899a297a907SKarl Rupp 
9005c6c1daeSBarry Smith   (*bag)->bagsize        = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar);
9015c6c1daeSBarry Smith   (*bag)->bagcomm        = comm;
9020298fd71SBarry Smith   (*bag)->bagprefix      = NULL;
9035c6c1daeSBarry Smith   (*bag)->structlocation = (void*)(((char*)(*bag)) + sizeof(PetscScalar)*(sizeof(struct _n_PetscBag)/sizeof(PetscScalar)) + sizeof(PetscScalar));
9045c6c1daeSBarry Smith   PetscFunctionReturn(0);
9055c6c1daeSBarry Smith }
9065c6c1daeSBarry Smith 
9075c6c1daeSBarry Smith #undef __FUNCT__
9085c6c1daeSBarry Smith #define __FUNCT__ "PetscBagSetName"
9095c6c1daeSBarry Smith /*@C
9105c6c1daeSBarry Smith     PetscBagSetName - Sets the name of a bag of values
9115c6c1daeSBarry Smith 
9125c6c1daeSBarry Smith   Not Collective
9135c6c1daeSBarry Smith 
9145c6c1daeSBarry Smith   Level: Intermediate
9155c6c1daeSBarry Smith 
9165c6c1daeSBarry Smith   Input Parameters:
9175c6c1daeSBarry Smith +   bag - the bag of values
9185c6c1daeSBarry Smith .   name - the name assigned to the bag
9195c6c1daeSBarry Smith -   help - help message for bag
9205c6c1daeSBarry Smith 
9215c6c1daeSBarry Smith .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
9225c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
9235c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum()
9245c6c1daeSBarry Smith @*/
9255c6c1daeSBarry Smith 
9265c6c1daeSBarry Smith PetscErrorCode PetscBagSetName(PetscBag bag, const char *name, const char *help)
9275c6c1daeSBarry Smith {
9285c6c1daeSBarry Smith   PetscErrorCode ierr;
9295fd66863SKarl Rupp 
9305c6c1daeSBarry Smith   PetscFunctionBegin;
9315c6c1daeSBarry Smith   ierr = PetscStrncpy(bag->bagname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr);
9325c6c1daeSBarry Smith   ierr = PetscStrncpy(bag->baghelp,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr);
9335c6c1daeSBarry Smith   PetscFunctionReturn(0);
9345c6c1daeSBarry Smith }
9355c6c1daeSBarry Smith 
9365c6c1daeSBarry Smith 
9375c6c1daeSBarry Smith #undef __FUNCT__
9385c6c1daeSBarry Smith #define __FUNCT__ "PetscBagGetName"
9395c6c1daeSBarry Smith /*@C
9405c6c1daeSBarry Smith     PetscBagGetName - Gets the name of a bag of values
9415c6c1daeSBarry Smith 
9425c6c1daeSBarry Smith   Not Collective
9435c6c1daeSBarry Smith 
9445c6c1daeSBarry Smith   Level: Intermediate
9455c6c1daeSBarry Smith 
9465c6c1daeSBarry Smith   Input Parameter:
9475c6c1daeSBarry Smith .   bag - the bag of values
9485c6c1daeSBarry Smith 
9495c6c1daeSBarry Smith   Output Parameter:
9505c6c1daeSBarry Smith .   name - the name assigned to the bag
9515c6c1daeSBarry Smith 
9525c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData()
9535c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
9545c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum()
9555c6c1daeSBarry Smith @*/
9565c6c1daeSBarry Smith PetscErrorCode PetscBagGetName(PetscBag bag, char **name)
9575c6c1daeSBarry Smith {
9585c6c1daeSBarry Smith   PetscFunctionBegin;
9595c6c1daeSBarry Smith   *name = bag->bagname;
9605c6c1daeSBarry Smith   PetscFunctionReturn(0);
9615c6c1daeSBarry Smith }
9625c6c1daeSBarry Smith 
9635c6c1daeSBarry Smith #undef __FUNCT__
9645c6c1daeSBarry Smith #define __FUNCT__ "PetscBagGetData"
9655c6c1daeSBarry Smith /*@C
9665c6c1daeSBarry Smith     PetscBagGetData - Gives back the user - access to memory that
9675c6c1daeSBarry Smith     should be used for storing user-data-structure
9685c6c1daeSBarry Smith 
9695c6c1daeSBarry Smith   Not Collective
9705c6c1daeSBarry Smith 
9715c6c1daeSBarry Smith   Level: Intermediate
9725c6c1daeSBarry Smith 
9735c6c1daeSBarry Smith   Input Parameter:
9745c6c1daeSBarry Smith .   bag - the bag of values
9755c6c1daeSBarry Smith 
9765c6c1daeSBarry Smith   Output Parameter:
9775c6c1daeSBarry Smith .   data - pointer to memory that will have user-data-structure
9785c6c1daeSBarry Smith 
9795c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad()
9805c6c1daeSBarry Smith            PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
9815c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum()
9825c6c1daeSBarry Smith @*/
9835c6c1daeSBarry Smith PetscErrorCode PetscBagGetData(PetscBag bag, void **data)
9845c6c1daeSBarry Smith {
9855c6c1daeSBarry Smith   PetscFunctionBegin;
9865c6c1daeSBarry Smith   *data = bag->structlocation;
9875c6c1daeSBarry Smith   PetscFunctionReturn(0);
9885c6c1daeSBarry Smith }
9895c6c1daeSBarry Smith 
9905c6c1daeSBarry Smith #undef __FUNCT__
9915c6c1daeSBarry Smith #define __FUNCT__ "PetscBagSetOptionsPrefix"
9925c6c1daeSBarry Smith /*@C
9935c6c1daeSBarry Smith   PetscBagSetOptionsPrefix - Sets the prefix used for searching for all
9945c6c1daeSBarry Smith   PetscBag items in the options database.
9955c6c1daeSBarry Smith 
9965c6c1daeSBarry Smith   Logically collective on Bag.
9975c6c1daeSBarry Smith 
9985c6c1daeSBarry Smith   Level: Intermediate
9995c6c1daeSBarry Smith 
10005c6c1daeSBarry Smith   Input Parameters:
10015c6c1daeSBarry Smith +   bag - the bag of values
10025c6c1daeSBarry Smith -   prefix - the prefix to prepend all Bag item names with.
10035c6c1daeSBarry Smith 
10045c6c1daeSBarry Smith   NOTES: Must be called prior to registering any of the bag items.
10055c6c1daeSBarry Smith 
10065c6c1daeSBarry Smith .seealso: PetscBag, PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar()
10075c6c1daeSBarry Smith            PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum()
10085c6c1daeSBarry Smith @*/
10095c6c1daeSBarry Smith 
10105c6c1daeSBarry Smith PetscErrorCode PetscBagSetOptionsPrefix(PetscBag bag, const char pre[])
10115c6c1daeSBarry Smith {
10125c6c1daeSBarry Smith   PetscErrorCode ierr;
10135fd66863SKarl Rupp 
10145c6c1daeSBarry Smith   PetscFunctionBegin;
10155c6c1daeSBarry Smith   if (!pre) {
10165c6c1daeSBarry Smith     ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr);
10175c6c1daeSBarry Smith   } else {
10185c6c1daeSBarry Smith     if (pre[0] == '-') SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Options prefix should not begin with a hypen");
10195c6c1daeSBarry Smith     ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr);
10205c6c1daeSBarry Smith     ierr = PetscStrallocpy(pre,&(bag->bagprefix));CHKERRQ(ierr);
10215c6c1daeSBarry Smith   }
10225c6c1daeSBarry Smith   PetscFunctionReturn(0);
10235c6c1daeSBarry Smith }
1024ffb7e86cSMatthew G. Knepley 
1025ffb7e86cSMatthew G. Knepley #undef __FUNCT__
1026ffb7e86cSMatthew G. Knepley #define __FUNCT__ "PetscBagGetNames"
1027ffb7e86cSMatthew G. Knepley /*@C
1028ffb7e86cSMatthew G. Knepley   PetscBagGetNames - Get the names of all entries in the bag
1029ffb7e86cSMatthew G. Knepley 
1030ffb7e86cSMatthew G. Knepley   Not collective
1031ffb7e86cSMatthew G. Knepley 
1032ffb7e86cSMatthew G. Knepley   Input Parameters:
1033ffb7e86cSMatthew G. Knepley + bag   - the bag of values
1034ffb7e86cSMatthew G. Knepley - names - array of the correct size to hold names
1035ffb7e86cSMatthew G. Knepley 
1036ffb7e86cSMatthew G. Knepley   Output Parameter:
1037ffb7e86cSMatthew G. Knepley . names - array of char pointers for names
1038ffb7e86cSMatthew G. Knepley 
1039ffb7e86cSMatthew G. Knepley   Level: intermediate
1040ffb7e86cSMatthew G. Knepley 
1041ffb7e86cSMatthew G. Knepley .seealso: PetscBag, PetscBagGetName(), PetscBagSetName(), PetscBagCreate(), PetscBagGetData()
1042ffb7e86cSMatthew G. Knepley           PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum()
1043ffb7e86cSMatthew G. Knepley @*/
1044ffb7e86cSMatthew G. Knepley PetscErrorCode PetscBagGetNames(PetscBag bag, const char *names[])
1045ffb7e86cSMatthew G. Knepley {
1046ffb7e86cSMatthew G. Knepley   PetscBagItem nitem = bag->bagitems;
1047ffb7e86cSMatthew G. Knepley   PetscInt     n;
1048ffb7e86cSMatthew G. Knepley 
1049ffb7e86cSMatthew G. Knepley   PetscFunctionBegin;
1050ffb7e86cSMatthew G. Knepley   for (n = 0; nitem; ++n, nitem = nitem->next) {names[n] = nitem->name;}
1051ffb7e86cSMatthew G. Knepley   PetscFunctionReturn(0);
1052ffb7e86cSMatthew G. Knepley }
1053