15c6c1daeSBarry Smith 2af0996ceSBarry Smith #include <petsc/private/bagimpl.h> /*I "petscbag.h" I*/ 3665c2dedSJed Brown #include <petscviewer.h> 45c6c1daeSBarry Smith 55c6c1daeSBarry Smith /* 65c6c1daeSBarry Smith Adds item to the linked list in a bag 75c6c1daeSBarry Smith */ 85c6c1daeSBarry Smith static PetscErrorCode PetscBagRegister_Private(PetscBag bag,PetscBagItem item,const char *name,const char *help) 95c6c1daeSBarry Smith { 105c6c1daeSBarry Smith PetscErrorCode ierr; 115c6c1daeSBarry Smith 125c6c1daeSBarry Smith PetscFunctionBegin; 135c6c1daeSBarry Smith ierr = PetscStrncpy(item->name,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 145c6c1daeSBarry Smith ierr = PetscStrncpy(item->help,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr); 155c6c1daeSBarry Smith if (!bag->bagitems) bag->bagitems = item; 165c6c1daeSBarry Smith else { 175c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 185c6c1daeSBarry Smith while (nitem->next) { 195c6c1daeSBarry Smith nitem = nitem->next; 205c6c1daeSBarry Smith } 215c6c1daeSBarry Smith nitem->next = item; 225c6c1daeSBarry Smith } 235c6c1daeSBarry Smith bag->count++; 245c6c1daeSBarry Smith PetscFunctionReturn(0); 255c6c1daeSBarry Smith } 265c6c1daeSBarry Smith 275c6c1daeSBarry Smith /*@C 285c6c1daeSBarry Smith PetscBagRegisterEnum - add an enum value to the bag 295c6c1daeSBarry Smith 305c6c1daeSBarry Smith Logically Collective on PetscBag 315c6c1daeSBarry Smith 325c6c1daeSBarry Smith Input Parameter: 335c6c1daeSBarry Smith + bag - the bag of values 345c6c1daeSBarry Smith . addr - location of enum in struct 355c6c1daeSBarry Smith . mdefault - the initial value 365c6c1daeSBarry Smith . list - array of strings containing names of enum values followed by enum name followed by enum prefix 375c6c1daeSBarry Smith - help - longer string with more information about the value 385c6c1daeSBarry Smith 395c6c1daeSBarry Smith Level: beginner 405c6c1daeSBarry Smith 415c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 425c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 435c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName() 445c6c1daeSBarry Smith 455c6c1daeSBarry Smith @*/ 465c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterEnum(PetscBag bag,void *addr,const char *const *list,PetscEnum mdefault, const char *name, const char *help) 475c6c1daeSBarry Smith { 485c6c1daeSBarry Smith PetscErrorCode ierr; 495c6c1daeSBarry Smith PetscBagItem item; 505c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 515c6c1daeSBarry Smith PetscBool printhelp; 525c6c1daeSBarry Smith PetscInt i = 0; 535c6c1daeSBarry Smith 545c6c1daeSBarry Smith PetscFunctionBegin; 555c6c1daeSBarry Smith nname[0] = '-'; 565c6c1daeSBarry Smith nname[1] = 0; 575c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 58c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 595c6c1daeSBarry Smith if (printhelp) { 605c6c1daeSBarry Smith while (list[i++]) ; 615c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: (%s) %s (choose one of) ",bag->bagprefix ? bag->bagprefix : "",name,list[mdefault],list[i-3],help);CHKERRQ(ierr); 625c6c1daeSBarry Smith for (i=0; list[i+2]; i++) { 635c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," %s",list[i]);CHKERRQ(ierr); 645c6c1daeSBarry Smith } 655c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,"\n");CHKERRQ(ierr); 665c6c1daeSBarry Smith } 67c5929fdfSBarry Smith ierr = PetscOptionsGetEnum(NULL,bag->bagprefix,nname,list,&mdefault,NULL);CHKERRQ(ierr); 685c6c1daeSBarry Smith 69b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 705c6c1daeSBarry Smith item->dtype = PETSC_ENUM; 715c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 725c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 735c6c1daeSBarry Smith item->next = 0; 745c6c1daeSBarry Smith item->msize = 1; 755c6c1daeSBarry Smith ierr = PetscStrArrayallocpy(list,(char***)&item->list);CHKERRQ(ierr); 765c6c1daeSBarry Smith *(PetscEnum*)addr = mdefault; 775c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 785c6c1daeSBarry Smith PetscFunctionReturn(0); 795c6c1daeSBarry Smith } 805c6c1daeSBarry Smith 815c6c1daeSBarry Smith /*@C 825c6c1daeSBarry Smith PetscBagRegisterIntArray - add an integer value to the bag 835c6c1daeSBarry Smith 845c6c1daeSBarry Smith Logically Collective on PetscBag 855c6c1daeSBarry Smith 865c6c1daeSBarry Smith Input Parameter: 875c6c1daeSBarry Smith + bag - the bag of values 885c6c1daeSBarry Smith . addr - location of integer in struct 895c6c1daeSBarry Smith . msize - number of entries in array 905c6c1daeSBarry Smith . name - name of the integer array 915c6c1daeSBarry Smith - help - longer string with more information about the value 925c6c1daeSBarry Smith 935c6c1daeSBarry Smith Level: beginner 945c6c1daeSBarry Smith 955c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 965c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 975c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 985c6c1daeSBarry Smith 995c6c1daeSBarry Smith @*/ 1005c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterIntArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 1015c6c1daeSBarry Smith { 1025c6c1daeSBarry Smith PetscErrorCode ierr; 1035c6c1daeSBarry Smith PetscBagItem item; 1045c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 1055c6c1daeSBarry Smith PetscBool printhelp; 1065c6c1daeSBarry Smith PetscInt i,tmp = msize; 1075c6c1daeSBarry Smith 1085c6c1daeSBarry Smith PetscFunctionBegin; 1095c6c1daeSBarry Smith /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/ 1105c6c1daeSBarry Smith nname[0] = '-'; 1115c6c1daeSBarry Smith nname[1] = 0; 1125c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 113c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 1145c6c1daeSBarry Smith if (printhelp) { 1155c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr); 1165c6c1daeSBarry Smith for (i=0; i<msize; i++) { 1175c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr); 1185c6c1daeSBarry Smith } 1195c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 1205c6c1daeSBarry Smith } 121c5929fdfSBarry Smith ierr = PetscOptionsGetIntArray(NULL,bag->bagprefix,nname,(PetscInt*)addr,&tmp,NULL);CHKERRQ(ierr); 1225c6c1daeSBarry Smith 123b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 1245c6c1daeSBarry Smith item->dtype = PETSC_INT; 1255c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 1265c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 1275c6c1daeSBarry Smith item->next = 0; 1285c6c1daeSBarry Smith item->msize = msize; 1295c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 1305c6c1daeSBarry Smith PetscFunctionReturn(0); 1315c6c1daeSBarry Smith } 1325c6c1daeSBarry Smith 1335c6c1daeSBarry Smith /*@C 1345c6c1daeSBarry Smith PetscBagRegisterRealArray - add an real array to the bag 1355c6c1daeSBarry Smith 1365c6c1daeSBarry Smith Logically Collective on PetscBag 1375c6c1daeSBarry Smith 1385c6c1daeSBarry Smith Input Parameter: 1395c6c1daeSBarry Smith + bag - the bag of values 1405c6c1daeSBarry Smith . addr - location of real array in struct 1415c6c1daeSBarry Smith . msize - number of entries in array 1425c6c1daeSBarry Smith . name - name of the integer array 1435c6c1daeSBarry Smith - help - longer string with more information about the value 1445c6c1daeSBarry Smith 1455c6c1daeSBarry Smith Level: beginner 1465c6c1daeSBarry Smith 1475c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 1485c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 1495c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 1505c6c1daeSBarry Smith 1515c6c1daeSBarry Smith @*/ 1525c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterRealArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 1535c6c1daeSBarry Smith { 1545c6c1daeSBarry Smith PetscErrorCode ierr; 1555c6c1daeSBarry Smith PetscBagItem item; 1565c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 1575c6c1daeSBarry Smith PetscBool printhelp; 1585c6c1daeSBarry Smith PetscInt i,tmp = msize; 1595c6c1daeSBarry Smith 1605c6c1daeSBarry Smith PetscFunctionBegin; 1615c6c1daeSBarry Smith /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/ 1625c6c1daeSBarry Smith nname[0] = '-'; 1635c6c1daeSBarry Smith nname[1] = 0; 1645c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 165c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 1665c6c1daeSBarry Smith if (printhelp) { 1675c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name);CHKERRQ(ierr); 1685c6c1daeSBarry Smith for (i=0; i<msize; i++) { 16957622a8eSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,"%g ",(double)*((PetscReal*)addr)+i);CHKERRQ(ierr); 1705c6c1daeSBarry Smith } 1715c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 1725c6c1daeSBarry Smith } 173c5929fdfSBarry Smith ierr = PetscOptionsGetRealArray(NULL,bag->bagprefix,nname,(PetscReal*)addr,&tmp,NULL);CHKERRQ(ierr); 1745c6c1daeSBarry Smith 175b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 1765c6c1daeSBarry Smith item->dtype = PETSC_REAL; 1775c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 1785c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 1795c6c1daeSBarry Smith item->next = 0; 1805c6c1daeSBarry Smith item->msize = msize; 1815c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 1825c6c1daeSBarry Smith PetscFunctionReturn(0); 1835c6c1daeSBarry Smith } 1845c6c1daeSBarry Smith 1855c6c1daeSBarry Smith /*@C 1865c6c1daeSBarry Smith PetscBagRegisterInt - add an integer value to the bag 1875c6c1daeSBarry Smith 1885c6c1daeSBarry Smith Logically Collective on PetscBag 1895c6c1daeSBarry Smith 1905c6c1daeSBarry Smith Input Parameter: 1915c6c1daeSBarry Smith + bag - the bag of values 1925c6c1daeSBarry Smith . addr - location of integer in struct 1935c6c1daeSBarry Smith . mdefault - the initial value 1945c6c1daeSBarry Smith . name - name of the integer 1955c6c1daeSBarry Smith - help - longer string with more information about the value 1965c6c1daeSBarry Smith 1975c6c1daeSBarry Smith Level: beginner 1985c6c1daeSBarry Smith 1995c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 200bafee8b4SSatish Balay PetscBagRegisterInt64(), PetscBagRegisterBool(), PetscBagRegisterScalar() 2015c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 2025c6c1daeSBarry Smith 2035c6c1daeSBarry Smith @*/ 2045c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterInt(PetscBag bag,void *addr,PetscInt mdefault,const char *name,const char *help) 2055c6c1daeSBarry Smith { 2065c6c1daeSBarry Smith PetscErrorCode ierr; 2075c6c1daeSBarry Smith PetscBagItem item; 2085c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 2095c6c1daeSBarry Smith PetscBool printhelp; 2105c6c1daeSBarry Smith 2115c6c1daeSBarry Smith PetscFunctionBegin; 2125c6c1daeSBarry Smith nname[0] = '-'; 2135c6c1daeSBarry Smith nname[1] = 0; 2145c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 215c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 2165c6c1daeSBarry Smith if (printhelp) { 2175c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr); 2185c6c1daeSBarry Smith } 219c5929fdfSBarry Smith ierr = PetscOptionsGetInt(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 2205c6c1daeSBarry Smith 221b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 2225c6c1daeSBarry Smith item->dtype = PETSC_INT; 2235c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 2245c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 2255c6c1daeSBarry Smith item->next = 0; 2265c6c1daeSBarry Smith item->msize = 1; 2275c6c1daeSBarry Smith *(PetscInt*)addr = mdefault; 2285c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 2295c6c1daeSBarry Smith PetscFunctionReturn(0); 2305c6c1daeSBarry Smith } 2315c6c1daeSBarry Smith 2320d349d43SBarry Smith /*@C 233bafee8b4SSatish Balay PetscBagRegisterInt64 - add an integer value to the bag 2340d349d43SBarry Smith 2350d349d43SBarry Smith Logically Collective on PetscBag 2360d349d43SBarry Smith 2370d349d43SBarry Smith Input Parameter: 2380d349d43SBarry Smith + bag - the bag of values 2390d349d43SBarry Smith . addr - location of integer in struct 2400d349d43SBarry Smith . mdefault - the initial value 2410d349d43SBarry Smith . name - name of the integer 2420d349d43SBarry Smith - help - longer string with more information about the value 2430d349d43SBarry Smith 2440d349d43SBarry Smith Level: beginner 2450d349d43SBarry Smith 2460d349d43SBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 2470d349d43SBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 2480d349d43SBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 2490d349d43SBarry Smith 2500d349d43SBarry Smith @*/ 251bafee8b4SSatish Balay PetscErrorCode PetscBagRegisterInt64(PetscBag bag,void *addr,PetscInt64 mdefault,const char *name,const char *help) 2520d349d43SBarry Smith { 2530d349d43SBarry Smith PetscErrorCode ierr; 2540d349d43SBarry Smith PetscBagItem item; 2550d349d43SBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 2560d349d43SBarry Smith PetscBool printhelp; 2570d349d43SBarry Smith PetscInt odefault = (PetscInt)mdefault; 2580d349d43SBarry Smith PetscBool flg; 2590d349d43SBarry Smith 2600d349d43SBarry Smith PetscFunctionBegin; 2610d349d43SBarry Smith nname[0] = '-'; 2620d349d43SBarry Smith nname[1] = 0; 2630d349d43SBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 264c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 2650d349d43SBarry Smith if (printhelp) { 2660d349d43SBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%d>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,odefault,help);CHKERRQ(ierr); 2670d349d43SBarry Smith } 268c5929fdfSBarry Smith ierr = PetscOptionsGetInt(NULL,bag->bagprefix,nname,&odefault,&flg);CHKERRQ(ierr); 269bafee8b4SSatish Balay if (flg) mdefault = (PetscInt64)odefault; 2700d349d43SBarry Smith 2710d349d43SBarry Smith ierr = PetscNew(&item);CHKERRQ(ierr); 2720d349d43SBarry Smith item->dtype = PETSC_INT; 2730d349d43SBarry Smith item->offset = ((char*)addr) - ((char*)bag); 2740d349d43SBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 2750d349d43SBarry Smith item->next = 0; 2760d349d43SBarry Smith item->msize = 1; 277bafee8b4SSatish Balay *(PetscInt64*)addr = mdefault; 2780d349d43SBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 2790d349d43SBarry Smith PetscFunctionReturn(0); 2800d349d43SBarry Smith } 2810d349d43SBarry Smith 282dd66f111SBlaise Bourdin /*@C 283dd66f111SBlaise Bourdin PetscBagRegisterBoolArray - add a n logical values to the bag 284dd66f111SBlaise Bourdin 285dd66f111SBlaise Bourdin Logically Collective on PetscBag 286dd66f111SBlaise Bourdin 287dd66f111SBlaise Bourdin Input Parameter: 288dd66f111SBlaise Bourdin + bag - the bag of values 289dd66f111SBlaise Bourdin . addr - location of boolean array in struct 290dd66f111SBlaise Bourdin . msize - number of entries in array 291dd66f111SBlaise Bourdin . name - name of the boolean array 292dd66f111SBlaise Bourdin - help - longer string with more information about the value 293dd66f111SBlaise Bourdin 294dd66f111SBlaise Bourdin Level: beginner 295dd66f111SBlaise Bourdin 296dd66f111SBlaise Bourdin .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 297dd66f111SBlaise Bourdin PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 298dd66f111SBlaise Bourdin PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 299dd66f111SBlaise Bourdin 300dd66f111SBlaise Bourdin @*/ 301dd66f111SBlaise Bourdin PetscErrorCode PetscBagRegisterBoolArray(PetscBag bag,void *addr,PetscInt msize, const char* name, const char* help) 302dd66f111SBlaise Bourdin { 303dd66f111SBlaise Bourdin PetscErrorCode ierr; 304dd66f111SBlaise Bourdin PetscBagItem item; 305dd66f111SBlaise Bourdin char nname[PETSC_BAG_NAME_LENGTH+1]; 306dd66f111SBlaise Bourdin PetscBool printhelp; 307dd66f111SBlaise Bourdin PetscInt i,tmp = msize; 308dd66f111SBlaise Bourdin 309dd66f111SBlaise Bourdin PetscFunctionBegin; 310dd66f111SBlaise Bourdin /* ierr = PetscMemzero(addr,msize*sizeof(PetscInt));CHKERRQ(ierr);*/ 311dd66f111SBlaise Bourdin nname[0] = '-'; 312dd66f111SBlaise Bourdin nname[1] = 0; 313dd66f111SBlaise Bourdin ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 314c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 315dd66f111SBlaise Bourdin if (printhelp) { 316dd66f111SBlaise Bourdin ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix?bag->bagprefix:"",name);CHKERRQ(ierr); 317dd66f111SBlaise Bourdin for (i=0; i<msize; i++) { 318dd66f111SBlaise Bourdin ierr = (*PetscHelpPrintf)(bag->bagcomm,"%D ",*((PetscInt*)addr)+i);CHKERRQ(ierr); 319dd66f111SBlaise Bourdin } 320dd66f111SBlaise Bourdin ierr = (*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help);CHKERRQ(ierr); 321dd66f111SBlaise Bourdin } 322c5929fdfSBarry Smith ierr = PetscOptionsGetBoolArray(NULL,bag->bagprefix,nname,(PetscBool*)addr,&tmp,NULL);CHKERRQ(ierr); 323dd66f111SBlaise Bourdin 324b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 325dd66f111SBlaise Bourdin item->dtype = PETSC_BOOL; 326dd66f111SBlaise Bourdin item->offset = ((char*)addr) - ((char*)bag); 327dd66f111SBlaise Bourdin if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 328dd66f111SBlaise Bourdin item->next = 0; 329dd66f111SBlaise Bourdin item->msize = msize; 330dd66f111SBlaise Bourdin ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 331dd66f111SBlaise Bourdin PetscFunctionReturn(0); 332dd66f111SBlaise Bourdin } 333dd66f111SBlaise Bourdin 3345c6c1daeSBarry Smith /*@C 3355c6c1daeSBarry Smith PetscBagRegisterString - add a string value to the bag 3365c6c1daeSBarry Smith 3375c6c1daeSBarry Smith Logically Collective on PetscBag 3385c6c1daeSBarry Smith 3395c6c1daeSBarry Smith Input Parameter: 3405c6c1daeSBarry Smith + bag - the bag of values 3415c6c1daeSBarry Smith . addr - location of start of string in struct 3425c6c1daeSBarry Smith . msize - length of the string space in the struct 3435c6c1daeSBarry Smith . mdefault - the initial value 3445c6c1daeSBarry Smith . name - name of the string 3455c6c1daeSBarry Smith - help - longer string with more information about the value 3465c6c1daeSBarry Smith 3475c6c1daeSBarry Smith Level: beginner 3485c6c1daeSBarry Smith 3495c6c1daeSBarry Smith Note: The struct should have the field char mystring[msize]; not char *mystring 3505c6c1daeSBarry Smith 3515c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 3525c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 3535c6c1daeSBarry Smith PetscBagSetFromOptions(),PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 3545c6c1daeSBarry Smith 3555c6c1daeSBarry Smith @*/ 3565c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterString(PetscBag bag,void *addr,PetscInt msize,const char* mdefault,const char* name,const char* help) 3575c6c1daeSBarry Smith { 3585c6c1daeSBarry Smith PetscErrorCode ierr; 3595c6c1daeSBarry Smith PetscBagItem item; 3605c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 3615c6c1daeSBarry Smith PetscBool printhelp; 3625c6c1daeSBarry Smith 3635c6c1daeSBarry Smith PetscFunctionBegin; 3645c6c1daeSBarry Smith nname[0] = '-'; 3655c6c1daeSBarry Smith nname[1] = 0; 3665c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 367c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 3685c6c1daeSBarry Smith if (printhelp) { 3695c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help);CHKERRQ(ierr); 3705c6c1daeSBarry Smith } 3715c6c1daeSBarry Smith 372b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 3735c6c1daeSBarry Smith item->dtype = PETSC_CHAR; 3745c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 3755c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 3765c6c1daeSBarry Smith item->next = 0; 3775c6c1daeSBarry Smith item->msize = msize; 3785c6c1daeSBarry Smith if (mdefault != (char*)addr) { 3795c6c1daeSBarry Smith ierr = PetscStrncpy((char*)addr,mdefault,msize-1);CHKERRQ(ierr); 3805c6c1daeSBarry Smith } 381c5929fdfSBarry Smith ierr = PetscOptionsGetString(NULL,bag->bagprefix,nname,(char*)addr,msize,NULL);CHKERRQ(ierr); 3825c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 3835c6c1daeSBarry Smith PetscFunctionReturn(0); 3845c6c1daeSBarry Smith } 3855c6c1daeSBarry Smith 3865c6c1daeSBarry Smith /*@C 3875c6c1daeSBarry Smith PetscBagRegisterReal - add a real value to the bag 3885c6c1daeSBarry Smith 3895c6c1daeSBarry Smith Logically Collective on PetscBag 3905c6c1daeSBarry Smith 3915c6c1daeSBarry Smith Input Parameter: 3925c6c1daeSBarry Smith + bag - the bag of values 3935c6c1daeSBarry Smith . addr - location of double in struct 3945c6c1daeSBarry Smith . mdefault - the initial value 3955c6c1daeSBarry Smith . name - name of the variable 3965c6c1daeSBarry Smith - help - longer string with more information about the value 3975c6c1daeSBarry Smith 3985c6c1daeSBarry Smith Level: beginner 3995c6c1daeSBarry Smith 4005c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 4015c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 4025c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 4035c6c1daeSBarry Smith 4045c6c1daeSBarry Smith @*/ 4055c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterReal(PetscBag bag,void *addr,PetscReal mdefault, const char *name, const char *help) 4065c6c1daeSBarry Smith { 4075c6c1daeSBarry Smith PetscErrorCode ierr; 4085c6c1daeSBarry Smith PetscBagItem item; 4095c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 4105c6c1daeSBarry Smith PetscBool printhelp; 4115c6c1daeSBarry Smith 4125c6c1daeSBarry Smith PetscFunctionBegin; 4135c6c1daeSBarry Smith nname[0] = '-'; 4145c6c1daeSBarry Smith nname[1] = 0; 4155c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 416c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 4175c6c1daeSBarry Smith if (printhelp) { 41857622a8eSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)mdefault,help);CHKERRQ(ierr); 4195c6c1daeSBarry Smith } 420c5929fdfSBarry Smith ierr = PetscOptionsGetReal(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 4215c6c1daeSBarry Smith 422b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 4235c6c1daeSBarry Smith item->dtype = PETSC_REAL; 4245c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 4255c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 4265c6c1daeSBarry Smith item->next = 0; 4275c6c1daeSBarry Smith item->msize = 1; 4285c6c1daeSBarry Smith *(PetscReal*)addr = mdefault; 4295c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 4305c6c1daeSBarry Smith PetscFunctionReturn(0); 4315c6c1daeSBarry Smith } 4325c6c1daeSBarry Smith 4335c6c1daeSBarry Smith /*@C 4345c6c1daeSBarry Smith PetscBagRegisterScalar - add a real or complex number value to the bag 4355c6c1daeSBarry Smith 4365c6c1daeSBarry Smith Logically Collective on PetscBag 4375c6c1daeSBarry Smith 4385c6c1daeSBarry Smith Input Parameter: 4395c6c1daeSBarry Smith + bag - the bag of values 4405c6c1daeSBarry Smith . addr - location of scalar in struct 4415c6c1daeSBarry Smith . mdefault - the initial value 4425c6c1daeSBarry Smith . name - name of the variable 4435c6c1daeSBarry Smith - help - longer string with more information about the value 4445c6c1daeSBarry Smith 4455c6c1daeSBarry Smith 4465c6c1daeSBarry Smith Level: beginner 4475c6c1daeSBarry Smith 4485c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 4495c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 4505c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 4515c6c1daeSBarry Smith 4525c6c1daeSBarry Smith @*/ 4535c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterScalar(PetscBag bag,void *addr,PetscScalar mdefault,const char *name,const char *help) 4545c6c1daeSBarry Smith { 4555c6c1daeSBarry Smith PetscErrorCode ierr; 4565c6c1daeSBarry Smith PetscBagItem item; 4575c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 4585c6c1daeSBarry Smith PetscBool printhelp; 4595c6c1daeSBarry Smith 4605c6c1daeSBarry Smith PetscFunctionBegin; 4615c6c1daeSBarry Smith nname[0] = '-'; 4625c6c1daeSBarry Smith nname[1] = 0; 4635c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 464c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 4655c6c1daeSBarry Smith if (printhelp) { 46657622a8eSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g + %gi>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)PetscRealPart(mdefault),(double)PetscImaginaryPart(mdefault),help);CHKERRQ(ierr); 4675c6c1daeSBarry Smith } 468c5929fdfSBarry Smith ierr = PetscOptionsGetScalar(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 4695c6c1daeSBarry Smith 470b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 4715c6c1daeSBarry Smith item->dtype = PETSC_SCALAR; 4725c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 4735c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 4745c6c1daeSBarry Smith item->next = 0; 4755c6c1daeSBarry Smith item->msize = 1; 4765c6c1daeSBarry Smith *(PetscScalar*)addr = mdefault; 4775c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 4785c6c1daeSBarry Smith PetscFunctionReturn(0); 4795c6c1daeSBarry Smith } 4805c6c1daeSBarry Smith 4815c6c1daeSBarry Smith /*@C 4825c6c1daeSBarry Smith PetscBagRegisterBool - add a logical value to the bag 4835c6c1daeSBarry Smith 4845c6c1daeSBarry Smith Logically Collective on PetscBag 4855c6c1daeSBarry Smith 4865c6c1daeSBarry Smith Input Parameter: 4875c6c1daeSBarry Smith + bag - the bag of values 4885c6c1daeSBarry Smith . addr - location of logical in struct 4895c6c1daeSBarry Smith . mdefault - the initial value 4905c6c1daeSBarry Smith . name - name of the variable 4915c6c1daeSBarry Smith - help - longer string with more information about the value 4925c6c1daeSBarry Smith 4935c6c1daeSBarry Smith 4945c6c1daeSBarry Smith Level: beginner 4955c6c1daeSBarry Smith 4965c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 4975c6c1daeSBarry Smith PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 4985c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 4995c6c1daeSBarry Smith 5005c6c1daeSBarry Smith @*/ 5015c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterBool(PetscBag bag,void *addr,PetscBool mdefault,const char *name,const char *help) 5025c6c1daeSBarry Smith { 5035c6c1daeSBarry Smith PetscErrorCode ierr; 5045c6c1daeSBarry Smith PetscBagItem item; 5055c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 5065c6c1daeSBarry Smith PetscBool printhelp; 5075c6c1daeSBarry Smith 5085c6c1daeSBarry Smith PetscFunctionBegin; 5095c6c1daeSBarry Smith /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 5105c6c1daeSBarry Smith if (mdefault != PETSC_FALSE && mdefault != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Boolean %s %s must be boolean; integer value %d",name,help,(int)mdefault); 5115c6c1daeSBarry Smith nname[0] = '-'; 5125c6c1daeSBarry Smith nname[1] = 0; 5135c6c1daeSBarry Smith ierr = PetscStrncat(nname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 514c5929fdfSBarry Smith ierr = PetscOptionsHasName(NULL,NULL,"-help",&printhelp);CHKERRQ(ierr); 5155c6c1daeSBarry Smith if (printhelp) { 5165c6c1daeSBarry Smith ierr = (*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,PetscBools[mdefault],help);CHKERRQ(ierr); 5175c6c1daeSBarry Smith } 518c5929fdfSBarry Smith ierr = PetscOptionsGetBool(NULL,bag->bagprefix,nname,&mdefault,NULL);CHKERRQ(ierr); 5195c6c1daeSBarry Smith 520b00a9115SJed Brown ierr = PetscNew(&item);CHKERRQ(ierr); 5215c6c1daeSBarry Smith item->dtype = PETSC_BOOL; 5225c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 5235c6c1daeSBarry Smith if (item->offset > bag->bagsize) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 5245c6c1daeSBarry Smith item->next = 0; 5255c6c1daeSBarry Smith item->msize = 1; 5265c6c1daeSBarry Smith *(PetscBool*)addr = mdefault; 5275c6c1daeSBarry Smith ierr = PetscBagRegister_Private(bag,item,name,help);CHKERRQ(ierr); 5285c6c1daeSBarry Smith PetscFunctionReturn(0); 5295c6c1daeSBarry Smith } 5305c6c1daeSBarry Smith 5315c6c1daeSBarry Smith /*@C 5325c6c1daeSBarry Smith PetscBagDestroy - Destroys a bag values 5335c6c1daeSBarry Smith 5345c6c1daeSBarry Smith Collective on PetscBag 5355c6c1daeSBarry Smith 5365c6c1daeSBarry Smith Input Parameter: 5375c6c1daeSBarry Smith . bag - the bag of values 5385c6c1daeSBarry Smith 5395c6c1daeSBarry Smith Level: beginner 5405c6c1daeSBarry Smith 5415c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 5425c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 5435c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 5445c6c1daeSBarry Smith 5455c6c1daeSBarry Smith @*/ 5465c6c1daeSBarry Smith PetscErrorCode PetscBagDestroy(PetscBag *bag) 5475c6c1daeSBarry Smith { 5485c6c1daeSBarry Smith PetscErrorCode ierr; 5495c6c1daeSBarry Smith PetscBagItem nitem = (*bag)->bagitems,item; 5505c6c1daeSBarry Smith 5515c6c1daeSBarry Smith PetscFunctionBegin; 5525c6c1daeSBarry Smith while (nitem) { 5535c6c1daeSBarry Smith item = nitem->next; 5545c6c1daeSBarry Smith if (nitem->list) { 5555c6c1daeSBarry Smith ierr = PetscStrArrayDestroy(&nitem->list);CHKERRQ(ierr); 5565c6c1daeSBarry Smith } 5575c6c1daeSBarry Smith ierr = PetscFree(nitem);CHKERRQ(ierr); 5585c6c1daeSBarry Smith nitem = item; 5595c6c1daeSBarry Smith } 5605c6c1daeSBarry Smith if ((*bag)->bagprefix) { ierr = PetscFree((*bag)->bagprefix);CHKERRQ(ierr); } 5615c6c1daeSBarry Smith ierr = PetscFree(*bag);CHKERRQ(ierr); 5625c6c1daeSBarry Smith PetscFunctionReturn(0); 5635c6c1daeSBarry Smith } 5645c6c1daeSBarry Smith 5655c6c1daeSBarry Smith /*@ 5665c6c1daeSBarry Smith PetscBagSetFromOptions - Allows setting options from a bag 5675c6c1daeSBarry Smith 5685c6c1daeSBarry Smith Collective on PetscBag 5695c6c1daeSBarry Smith 5705c6c1daeSBarry Smith Input Parameter: 5715c6c1daeSBarry Smith . bag - the bag of values 5725c6c1daeSBarry Smith 5735c6c1daeSBarry Smith Level: beginner 5745c6c1daeSBarry Smith 5755c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData() 5765c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 5775c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagView(), PetscBagRegisterEnum() 5785c6c1daeSBarry Smith 5795c6c1daeSBarry Smith @*/ 5805c6c1daeSBarry Smith PetscErrorCode PetscBagSetFromOptions(PetscBag bag) 5815c6c1daeSBarry Smith { 5825c6c1daeSBarry Smith PetscErrorCode ierr; 5835c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 5845c6c1daeSBarry Smith char name[PETSC_BAG_NAME_LENGTH+1],helpname[PETSC_BAG_NAME_LENGTH+PETSC_BAG_HELP_LENGTH+3]; 5855c6c1daeSBarry Smith PetscInt n; 5865c6c1daeSBarry Smith 5875c6c1daeSBarry Smith PetscFunctionBegin; 5885c6c1daeSBarry Smith ierr = PetscStrcpy(helpname,bag->bagname);CHKERRQ(ierr); 5895c6c1daeSBarry Smith ierr = PetscStrcat(helpname," ");CHKERRQ(ierr); 5905c6c1daeSBarry Smith ierr = PetscStrcat(helpname,bag->baghelp);CHKERRQ(ierr); 591302440fdSBarry Smith ierr = PetscOptionsBegin(bag->bagcomm,bag->bagprefix,helpname,0);CHKERRQ(ierr); 5925c6c1daeSBarry Smith while (nitem) { 5935c6c1daeSBarry Smith name[0] = '-'; 5945c6c1daeSBarry Smith name[1] = 0; 5955c6c1daeSBarry Smith ierr = PetscStrcat(name,nitem->name);CHKERRQ(ierr); 5965c6c1daeSBarry Smith if (nitem->dtype == PETSC_CHAR) { /* special handling for fortran required? [due to space padding vs null termination] */ 5975c6c1daeSBarry Smith char *value = (char*)(((char*)bag) + nitem->offset); 5980298fd71SBarry Smith ierr = PetscOptionsString(name,nitem->help,"",value,value,nitem->msize,NULL);CHKERRQ(ierr); 5995c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_REAL) { 6005c6c1daeSBarry Smith PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 6015c6c1daeSBarry Smith if (nitem->msize == 1) { 6020298fd71SBarry Smith ierr = PetscOptionsReal(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 6035c6c1daeSBarry Smith } else { 6045c6c1daeSBarry Smith n = nitem->msize; 6050298fd71SBarry Smith ierr = PetscOptionsRealArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 6065c6c1daeSBarry Smith } 6075c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_SCALAR) { 6085c6c1daeSBarry Smith PetscScalar *value = (PetscScalar*)(((char*)bag) + nitem->offset); 6090298fd71SBarry Smith ierr = PetscOptionsScalar(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 6105c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_INT) { 6115c6c1daeSBarry Smith PetscInt *value = (PetscInt*)(((char*)bag) + nitem->offset); 6125c6c1daeSBarry Smith if (nitem->msize == 1) { 6130298fd71SBarry Smith ierr = PetscOptionsInt(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 6145c6c1daeSBarry Smith } else { 6155c6c1daeSBarry Smith n = nitem->msize; 6160298fd71SBarry Smith ierr = PetscOptionsIntArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 6175c6c1daeSBarry Smith } 6185c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_ENUM) { 6195c6c1daeSBarry Smith PetscEnum *value = (PetscEnum*)(((char*)bag) + nitem->offset); 6205c6c1daeSBarry Smith PetscInt i = 0; 6215c6c1daeSBarry Smith while (nitem->list[i++]) ; 6220298fd71SBarry Smith ierr = PetscOptionsEnum(name,nitem->help,nitem->list[i-3],(const char*const*)nitem->list,*value,value,NULL);CHKERRQ(ierr); 6235c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_BOOL) { 6245c6c1daeSBarry Smith PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 625dd66f111SBlaise Bourdin if (nitem->msize == 1) { 6260298fd71SBarry Smith ierr = PetscOptionsBool(name,nitem->help,"",*value,value,NULL);CHKERRQ(ierr); 627dd66f111SBlaise Bourdin } else { 628dd66f111SBlaise Bourdin n = nitem->msize; 629dd66f111SBlaise Bourdin ierr = PetscOptionsBoolArray(name,nitem->help,"",value,&n,NULL);CHKERRQ(ierr); 630dd66f111SBlaise Bourdin } 6315c6c1daeSBarry Smith } 6325c6c1daeSBarry Smith nitem = nitem->next; 6335c6c1daeSBarry Smith } 6345c6c1daeSBarry Smith PetscOptionsEnd(); 6355c6c1daeSBarry Smith PetscFunctionReturn(0); 6365c6c1daeSBarry Smith } 6375c6c1daeSBarry Smith 6385c6c1daeSBarry Smith /*@C 6395c6c1daeSBarry Smith PetscBagView - Views a bag of values as either ASCII text or a binary file 6405c6c1daeSBarry Smith 6415c6c1daeSBarry Smith Collective on PetscBag 6425c6c1daeSBarry Smith 6435c6c1daeSBarry Smith Input Parameter: 6445c6c1daeSBarry Smith + bag - the bag of values 6455c6c1daeSBarry Smith - viewer - location to view the values 6465c6c1daeSBarry Smith 6475c6c1daeSBarry Smith Level: beginner 6485c6c1daeSBarry Smith 6495c6c1daeSBarry Smith Warning: Currently PETSc bags saved in a binary file can only be read back 6505c6c1daeSBarry Smith in on a machine of the same architecture. Let us know when this is a problem 6515c6c1daeSBarry Smith and we'll fix it. 6525c6c1daeSBarry Smith 6535c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagLoad(), PetscBagGetData() 6545c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum() 6555c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName() 6565c6c1daeSBarry Smith 6575c6c1daeSBarry Smith @*/ 6585c6c1daeSBarry Smith PetscErrorCode PetscBagView(PetscBag bag,PetscViewer view) 6595c6c1daeSBarry Smith { 6605c6c1daeSBarry Smith PetscBool isascii,isbinary; 6615c6c1daeSBarry Smith PetscErrorCode ierr; 6625c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 6635c6c1daeSBarry Smith 6645c6c1daeSBarry Smith PetscFunctionBegin; 6655c6c1daeSBarry Smith ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERASCII,&isascii);CHKERRQ(ierr); 6665c6c1daeSBarry Smith ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 6675c6c1daeSBarry Smith if (isascii) { 6683ffde785SBarry Smith if (bag->bagprefix) { 6693ffde785SBarry Smith ierr = PetscViewerASCIIPrintf(view,"PetscBag Object: %s (%s) %s\n",bag->bagname,bag->bagprefix,bag->baghelp);CHKERRQ(ierr); 6703ffde785SBarry Smith } else { 6715c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"PetscBag Object: %s %s\n",bag->bagname,bag->baghelp);CHKERRQ(ierr); 6723ffde785SBarry Smith } 6735c6c1daeSBarry Smith while (nitem) { 6745c6c1daeSBarry Smith if (nitem->dtype == PETSC_CHAR) { 6755c6c1daeSBarry Smith char *value = (char*)(((char*)bag) + nitem->offset); 6765c6c1daeSBarry Smith char tmp = value[nitem->msize-1]; /* special handling for fortran chars wihout null terminator */ 6775c6c1daeSBarry Smith value[nitem->msize-1] =0; 6785c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %s; %s\n",nitem->name,value,nitem->help);CHKERRQ(ierr); 6795c6c1daeSBarry Smith value[nitem->msize-1] = tmp; 6805c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_REAL) { 6815c6c1daeSBarry Smith PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 6825c6c1daeSBarry Smith PetscInt i; 6835c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 6845c6c1daeSBarry Smith for (i=0; i<nitem->msize; i++) { 68557622a8eSBarry Smith ierr = PetscViewerASCIIPrintf(view,"%g ",(double)value[i]);CHKERRQ(ierr); 6865c6c1daeSBarry Smith } 6875c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 6885c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_SCALAR) { 6895c6c1daeSBarry Smith PetscScalar value = *(PetscScalar*)(((char*)bag) + nitem->offset); 6905c6c1daeSBarry Smith #if defined(PETSC_USE_COMPLEX) 6918627564fSBarry Smith if ((double)PetscImaginaryPart(value)) { 69257622a8eSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %g + %gi; %s\n",nitem->name,(double)PetscRealPart(value),(double)PetscImaginaryPart(value),nitem->help);CHKERRQ(ierr); 6938627564fSBarry Smith } else { 6948627564fSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %g; %s\n",nitem->name,(double)PetscRealPart(value),nitem->help);CHKERRQ(ierr); 6958627564fSBarry Smith } 6965c6c1daeSBarry Smith #else 69757622a8eSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %g; %s\n",nitem->name,(double)value,nitem->help);CHKERRQ(ierr); 6985c6c1daeSBarry Smith #endif 6995c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_INT) { 7005c6c1daeSBarry Smith PetscInt i,*value = (PetscInt*)(((char*)bag) + nitem->offset); 7015c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 7025c6c1daeSBarry Smith for (i=0; i<nitem->msize; i++) { 7035c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"%D ",value[i]);CHKERRQ(ierr); 7045c6c1daeSBarry Smith } 7055c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 7065c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_BOOL) { 707dd66f111SBlaise Bourdin PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 708dd66f111SBlaise Bourdin PetscInt i; 7095c6c1daeSBarry Smith /* some Fortran compilers use -1 as boolean */ 710dd66f111SBlaise Bourdin ierr = PetscViewerASCIIPrintf(view," %s = ",nitem->name);CHKERRQ(ierr); 711dd66f111SBlaise Bourdin for (i=0; i<nitem->msize; i++) { 712dd66f111SBlaise Bourdin if (((int) value[i]) == -1) value[i] = PETSC_TRUE; 7135c6c1daeSBarry Smith /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 714dd66f111SBlaise Bourdin if (value[i] != PETSC_FALSE && value[i] != PETSC_TRUE) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Boolean value for %s %s is corrupt; integer value %d",nitem->name,nitem->help,value); 715dd66f111SBlaise Bourdin ierr = PetscViewerASCIIPrintf(view," %s",PetscBools[value[i]]);CHKERRQ(ierr); 716dd66f111SBlaise Bourdin } 717dd66f111SBlaise Bourdin ierr = PetscViewerASCIIPrintf(view,"; %s\n",nitem->help);CHKERRQ(ierr); 7185c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_ENUM) { 7195c6c1daeSBarry Smith PetscEnum value = *(PetscEnum*)(((char*)bag) + nitem->offset); 7205c6c1daeSBarry Smith PetscInt i = 0; 7215c6c1daeSBarry Smith while (nitem->list[i++]) ; 7225c6c1daeSBarry Smith ierr = PetscViewerASCIIPrintf(view," %s = %s; (%s) %s\n",nitem->name,nitem->list[value],nitem->list[i-3],nitem->help);CHKERRQ(ierr); 7235c6c1daeSBarry Smith } 7245c6c1daeSBarry Smith nitem = nitem->next; 7255c6c1daeSBarry Smith } 7265c6c1daeSBarry Smith } else if (isbinary) { 7275c6c1daeSBarry Smith PetscInt classid = PETSC_BAG_FILE_CLASSID, dtype; 7285c6c1daeSBarry Smith PetscInt deprecatedbagsize = 0; 729a261c58fSBarry Smith PetscViewerFormat format; 7305c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&classid,1,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr); 7315c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&deprecatedbagsize,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7325c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&bag->count,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7335c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,bag->bagname,PETSC_BAG_NAME_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7345c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7355c6c1daeSBarry Smith while (nitem) { 7365c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&nitem->offset,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7375c6c1daeSBarry Smith dtype = (PetscInt)nitem->dtype; 7385c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&dtype,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7395c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,nitem->name,PETSC_BAG_NAME_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7405c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,nitem->help,PETSC_BAG_HELP_LENGTH,PETSC_CHAR,PETSC_FALSE);CHKERRQ(ierr); 7415c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,&nitem->msize,1,PETSC_INT,PETSC_FALSE);CHKERRQ(ierr); 7425c6c1daeSBarry Smith /* some Fortran compilers use -1 as boolean */ 7435c6c1daeSBarry Smith if (dtype == PETSC_BOOL && ((*(int*) (((char*)bag) + nitem->offset) == -1))) *(int*) (((char*)bag) + nitem->offset) = PETSC_TRUE; 7445c6c1daeSBarry Smith 7455c6c1daeSBarry Smith ierr = PetscViewerBinaryWrite(view,(((char*)bag) + nitem->offset),nitem->msize,nitem->dtype,PETSC_FALSE);CHKERRQ(ierr); 7465c6c1daeSBarry Smith if (dtype == PETSC_ENUM) { 747*196bbcbdSSatish Balay ierr = PetscViewerBinaryWriteStringArray(view,(const char* const*)nitem->list);CHKERRQ(ierr); 7485c6c1daeSBarry Smith } 7495c6c1daeSBarry Smith nitem = nitem->next; 7505c6c1daeSBarry Smith } 751a261c58fSBarry Smith ierr = PetscViewerGetFormat(view,&format);CHKERRQ(ierr); 752a261c58fSBarry Smith if (format == PETSC_VIEWER_BINARY_MATLAB) { 753a261c58fSBarry Smith MPI_Comm comm; 754a261c58fSBarry Smith FILE *info; 755a261c58fSBarry Smith ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr); 756a261c58fSBarry Smith ierr = PetscViewerBinaryGetInfoPointer(view,&info);CHKERRQ(ierr); 757da88d4d4SJed Brown ierr = PetscFPrintf(comm,info,"#--- begin code written by PetscViewerBinary for MATLAB format ---#\n");CHKERRQ(ierr); 758da88d4d4SJed Brown ierr = PetscFPrintf(comm,info,"#$$ Set.%s = PetscBinaryRead(fd);\n",bag->bagname);CHKERRQ(ierr); 759da88d4d4SJed Brown ierr = PetscFPrintf(comm,info,"#--- end code written by PetscViewerBinary for MATLAB format ---#\n\n");CHKERRQ(ierr); 760a261c58fSBarry Smith } 761a261c58fSBarry Smith } 7625c6c1daeSBarry Smith PetscFunctionReturn(0); 7635c6c1daeSBarry Smith } 7645c6c1daeSBarry Smith 7655c6c1daeSBarry Smith /*@C 7665c6c1daeSBarry Smith PetscBagLoad - Loads a bag of values from a binary file 7675c6c1daeSBarry Smith 7685c6c1daeSBarry Smith Collective on PetscViewer 7695c6c1daeSBarry Smith 7705c6c1daeSBarry Smith Input Parameter: 7715c6c1daeSBarry Smith + viewer - file to load values from 7725c6c1daeSBarry Smith - bag - the bag of values 7735c6c1daeSBarry Smith 7745c6c1daeSBarry Smith Notes: You must have created and registered all the fields in the bag before loading into it. 7755c6c1daeSBarry Smith 7765c6c1daeSBarry Smith Notes: 7775c6c1daeSBarry Smith Level: beginner 7785c6c1daeSBarry Smith 7795c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagDestroy(), PetscBagView(), PetscBagGetData() 7805c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 7815c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagGetName(), PetscBagRegisterEnum() 7825c6c1daeSBarry Smith 7835c6c1daeSBarry Smith @*/ 7845c6c1daeSBarry Smith PetscErrorCode PetscBagLoad(PetscViewer view,PetscBag bag) 7855c6c1daeSBarry Smith { 7865c6c1daeSBarry Smith PetscErrorCode ierr; 7875c6c1daeSBarry Smith PetscBool isbinary; 788060da220SMatthew G. Knepley PetscInt classid,bagcount,i,dtype,msize,offset,deprecatedbagsize; 7895c6c1daeSBarry Smith char name[PETSC_BAG_NAME_LENGTH],help[PETSC_BAG_HELP_LENGTH],**list; 7905c6c1daeSBarry Smith PetscBagItem nitem; 7915c6c1daeSBarry Smith MPI_Comm comm; 7925c6c1daeSBarry Smith PetscMPIInt flag; 7935c6c1daeSBarry Smith 7945c6c1daeSBarry Smith PetscFunctionBegin; 7955c6c1daeSBarry Smith ierr = PetscObjectGetComm((PetscObject)view,&comm);CHKERRQ(ierr); 7965c6c1daeSBarry Smith ierr = MPI_Comm_compare(comm,bag->bagcomm,&flag);CHKERRQ(ierr); 7975c6c1daeSBarry Smith if (flag != MPI_CONGRUENT && flag != MPI_IDENT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"Different communicators in the viewer and bag"); \ 7985c6c1daeSBarry Smith ierr = PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr); 7995c6c1daeSBarry Smith if (!isbinary) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for this viewer type"); 8005c6c1daeSBarry Smith 801060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&classid,1,NULL,PETSC_INT);CHKERRQ(ierr); 8025c6c1daeSBarry Smith if (classid != PETSC_BAG_FILE_CLASSID) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not PetscBag next in binary file"); 803060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&deprecatedbagsize,1,NULL,PETSC_INT);CHKERRQ(ierr); 804060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&bagcount,1,NULL,PETSC_INT);CHKERRQ(ierr); 8055c6c1daeSBarry Smith if (bagcount != bag->count) SETERRQ2(comm,PETSC_ERR_ARG_INCOMP,"Bag in file has different number of entries %d then passed in bag %d\n",(int)bagcount,(int)bag->count);CHKERRQ(ierr); 806060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,bag->bagname,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 807060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 8085c6c1daeSBarry Smith 8095c6c1daeSBarry Smith nitem = bag->bagitems; 8105c6c1daeSBarry Smith for (i=0; i<bagcount; i++) { 811060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&offset,1,NULL,PETSC_INT);CHKERRQ(ierr); 8125c6c1daeSBarry Smith /* ignore the offset in the file */ 813060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&dtype,1,NULL,PETSC_INT);CHKERRQ(ierr); 814060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,name,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 815060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,help,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR);CHKERRQ(ierr); 816060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,&msize,1,NULL,PETSC_INT);CHKERRQ(ierr); 8175c6c1daeSBarry Smith 8185c6c1daeSBarry Smith if (dtype == (PetscInt) PETSC_CHAR) { 819060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_CHAR);CHKERRQ(ierr); 8205c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_REAL) { 821060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_REAL);CHKERRQ(ierr); 8225c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_SCALAR) { 823060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_SCALAR);CHKERRQ(ierr); 8245c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_INT) { 825060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_INT);CHKERRQ(ierr); 8265c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_BOOL) { 827060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_BOOL);CHKERRQ(ierr); 8285c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_ENUM) { 829060da220SMatthew G. Knepley ierr = PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_ENUM);CHKERRQ(ierr); 8305c6c1daeSBarry Smith ierr = PetscViewerBinaryReadStringArray(view,&list);CHKERRQ(ierr); 8315c6c1daeSBarry Smith /* don't need to save list because it is already registered in the bag */ 8325c6c1daeSBarry Smith ierr = PetscFree(list);CHKERRQ(ierr); 8335c6c1daeSBarry Smith } 8345c6c1daeSBarry Smith nitem = nitem->next; 8355c6c1daeSBarry Smith } 8365c6c1daeSBarry Smith PetscFunctionReturn(0); 8375c6c1daeSBarry Smith } 8385c6c1daeSBarry Smith 839e8976759SBarry Smith /*@C 8405c6c1daeSBarry Smith PetscBagCreate - Create a bag of values 8415c6c1daeSBarry Smith 8425c6c1daeSBarry Smith Collective on MPI_Comm 8435c6c1daeSBarry Smith 8445c6c1daeSBarry Smith Level: Intermediate 8455c6c1daeSBarry Smith 8465c6c1daeSBarry Smith Input Parameters: 8475c6c1daeSBarry Smith + comm - communicator to share bag 8485c6c1daeSBarry Smith - bagsize - size of the C structure holding the values 8495c6c1daeSBarry Smith 8505c6c1daeSBarry Smith Output Parameter: 8515c6c1daeSBarry Smith . bag - the bag of values 8525c6c1daeSBarry Smith 8535c6c1daeSBarry Smith Notes: 8545c6c1daeSBarry Smith The size of the A struct must be small enough to fit in a PetscInt; by default 8555c6c1daeSBarry Smith PetscInt is 4 bytes; this means a bag cannot be larger than 2 gigabytes in length. 8565c6c1daeSBarry Smith The warning about casting to a shorter length can be ignored below unless your A struct is too large 8575c6c1daeSBarry Smith 8585c6c1daeSBarry Smith .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 8595c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 8605c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 8615c6c1daeSBarry Smith @*/ 8625c6c1daeSBarry Smith PetscErrorCode PetscBagCreate(MPI_Comm comm, size_t bagsize, PetscBag *bag) 8635c6c1daeSBarry Smith { 8645c6c1daeSBarry Smith PetscErrorCode ierr; 8655c6c1daeSBarry Smith size_t totalsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar); 8665c6c1daeSBarry Smith 8675c6c1daeSBarry Smith PetscFunctionBegin; 8680298fd71SBarry Smith ierr = PetscInfo1(NULL,"Creating Bag with total size %d\n",(int)totalsize);CHKERRQ(ierr); 8695c6c1daeSBarry Smith ierr = PetscMalloc(totalsize,bag);CHKERRQ(ierr); 8705c6c1daeSBarry Smith ierr = PetscMemzero(*bag,bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar));CHKERRQ(ierr); 871a297a907SKarl Rupp 8725c6c1daeSBarry Smith (*bag)->bagsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar); 8735c6c1daeSBarry Smith (*bag)->bagcomm = comm; 8740298fd71SBarry Smith (*bag)->bagprefix = NULL; 8755c6c1daeSBarry Smith (*bag)->structlocation = (void*)(((char*)(*bag)) + sizeof(PetscScalar)*(sizeof(struct _n_PetscBag)/sizeof(PetscScalar)) + sizeof(PetscScalar)); 8765c6c1daeSBarry Smith PetscFunctionReturn(0); 8775c6c1daeSBarry Smith } 8785c6c1daeSBarry Smith 8795c6c1daeSBarry Smith /*@C 8805c6c1daeSBarry Smith PetscBagSetName - Sets the name of a bag of values 8815c6c1daeSBarry Smith 8825c6c1daeSBarry Smith Not Collective 8835c6c1daeSBarry Smith 8845c6c1daeSBarry Smith Level: Intermediate 8855c6c1daeSBarry Smith 8865c6c1daeSBarry Smith Input Parameters: 8875c6c1daeSBarry Smith + bag - the bag of values 8885c6c1daeSBarry Smith . name - the name assigned to the bag 8895c6c1daeSBarry Smith - help - help message for bag 8905c6c1daeSBarry Smith 8915c6c1daeSBarry Smith .seealso: PetscBag, PetscBagGetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 8925c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 8935c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 8945c6c1daeSBarry Smith @*/ 8955c6c1daeSBarry Smith 8965c6c1daeSBarry Smith PetscErrorCode PetscBagSetName(PetscBag bag, const char *name, const char *help) 8975c6c1daeSBarry Smith { 8985c6c1daeSBarry Smith PetscErrorCode ierr; 8995fd66863SKarl Rupp 9005c6c1daeSBarry Smith PetscFunctionBegin; 9015c6c1daeSBarry Smith ierr = PetscStrncpy(bag->bagname,name,PETSC_BAG_NAME_LENGTH-1);CHKERRQ(ierr); 9025c6c1daeSBarry Smith ierr = PetscStrncpy(bag->baghelp,help,PETSC_BAG_HELP_LENGTH-1);CHKERRQ(ierr); 9035c6c1daeSBarry Smith PetscFunctionReturn(0); 9045c6c1daeSBarry Smith } 9055c6c1daeSBarry Smith 9065c6c1daeSBarry Smith 9075c6c1daeSBarry Smith /*@C 9085c6c1daeSBarry Smith PetscBagGetName - Gets the name of a bag of values 9095c6c1daeSBarry Smith 9105c6c1daeSBarry Smith Not Collective 9115c6c1daeSBarry Smith 9125c6c1daeSBarry Smith Level: Intermediate 9135c6c1daeSBarry Smith 9145c6c1daeSBarry Smith Input Parameter: 9155c6c1daeSBarry Smith . bag - the bag of values 9165c6c1daeSBarry Smith 9175c6c1daeSBarry Smith Output Parameter: 9185c6c1daeSBarry Smith . name - the name assigned to the bag 9195c6c1daeSBarry Smith 9205c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad(), PetscBagGetData() 9215c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 9225c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 9235c6c1daeSBarry Smith @*/ 9245c6c1daeSBarry Smith PetscErrorCode PetscBagGetName(PetscBag bag, char **name) 9255c6c1daeSBarry Smith { 9265c6c1daeSBarry Smith PetscFunctionBegin; 9275c6c1daeSBarry Smith *name = bag->bagname; 9285c6c1daeSBarry Smith PetscFunctionReturn(0); 9295c6c1daeSBarry Smith } 9305c6c1daeSBarry Smith 9315c6c1daeSBarry Smith /*@C 9325c6c1daeSBarry Smith PetscBagGetData - Gives back the user - access to memory that 9335c6c1daeSBarry Smith should be used for storing user-data-structure 9345c6c1daeSBarry Smith 9355c6c1daeSBarry Smith Not Collective 9365c6c1daeSBarry Smith 9375c6c1daeSBarry Smith Level: Intermediate 9385c6c1daeSBarry Smith 9395c6c1daeSBarry Smith Input Parameter: 9405c6c1daeSBarry Smith . bag - the bag of values 9415c6c1daeSBarry Smith 9425c6c1daeSBarry Smith Output Parameter: 9435c6c1daeSBarry Smith . data - pointer to memory that will have user-data-structure 9445c6c1daeSBarry Smith 9455c6c1daeSBarry Smith .seealso: PetscBag, PetscBagSetName(), PetscBagView(), PetscBagLoad() 9465c6c1daeSBarry Smith PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 9475c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 9485c6c1daeSBarry Smith @*/ 9495c6c1daeSBarry Smith PetscErrorCode PetscBagGetData(PetscBag bag, void **data) 9505c6c1daeSBarry Smith { 9515c6c1daeSBarry Smith PetscFunctionBegin; 9525c6c1daeSBarry Smith *data = bag->structlocation; 9535c6c1daeSBarry Smith PetscFunctionReturn(0); 9545c6c1daeSBarry Smith } 9555c6c1daeSBarry Smith 9565c6c1daeSBarry Smith /*@C 9575c6c1daeSBarry Smith PetscBagSetOptionsPrefix - Sets the prefix used for searching for all 9585c6c1daeSBarry Smith PetscBag items in the options database. 9595c6c1daeSBarry Smith 9605c6c1daeSBarry Smith Logically collective on Bag. 9615c6c1daeSBarry Smith 9625c6c1daeSBarry Smith Level: Intermediate 9635c6c1daeSBarry Smith 9645c6c1daeSBarry Smith Input Parameters: 9655c6c1daeSBarry Smith + bag - the bag of values 9665c6c1daeSBarry Smith - prefix - the prefix to prepend all Bag item names with. 9675c6c1daeSBarry Smith 9685c6c1daeSBarry Smith NOTES: Must be called prior to registering any of the bag items. 9695c6c1daeSBarry Smith 9705c6c1daeSBarry Smith .seealso: PetscBag, PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar() 9715c6c1daeSBarry Smith PetscBagSetFromOptions(), PetscBagCreate(), PetscBagDestroy(), PetscBagRegisterEnum() 9725c6c1daeSBarry Smith @*/ 9735c6c1daeSBarry Smith 9745c6c1daeSBarry Smith PetscErrorCode PetscBagSetOptionsPrefix(PetscBag bag, const char pre[]) 9755c6c1daeSBarry Smith { 9765c6c1daeSBarry Smith PetscErrorCode ierr; 9775fd66863SKarl Rupp 9785c6c1daeSBarry Smith PetscFunctionBegin; 9795c6c1daeSBarry Smith if (!pre) { 9805c6c1daeSBarry Smith ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr); 9815c6c1daeSBarry Smith } else { 9825c6c1daeSBarry Smith if (pre[0] == '-') SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Options prefix should not begin with a hypen"); 9835c6c1daeSBarry Smith ierr = PetscFree(bag->bagprefix);CHKERRQ(ierr); 9845c6c1daeSBarry Smith ierr = PetscStrallocpy(pre,&(bag->bagprefix));CHKERRQ(ierr); 9855c6c1daeSBarry Smith } 9865c6c1daeSBarry Smith PetscFunctionReturn(0); 9875c6c1daeSBarry Smith } 988ffb7e86cSMatthew G. Knepley 989ffb7e86cSMatthew G. Knepley /*@C 990ffb7e86cSMatthew G. Knepley PetscBagGetNames - Get the names of all entries in the bag 991ffb7e86cSMatthew G. Knepley 992ffb7e86cSMatthew G. Knepley Not collective 993ffb7e86cSMatthew G. Knepley 994ffb7e86cSMatthew G. Knepley Input Parameters: 995ffb7e86cSMatthew G. Knepley + bag - the bag of values 996ffb7e86cSMatthew G. Knepley - names - array of the correct size to hold names 997ffb7e86cSMatthew G. Knepley 998ffb7e86cSMatthew G. Knepley Output Parameter: 999ffb7e86cSMatthew G. Knepley . names - array of char pointers for names 1000ffb7e86cSMatthew G. Knepley 1001ffb7e86cSMatthew G. Knepley Level: intermediate 1002ffb7e86cSMatthew G. Knepley 1003ffb7e86cSMatthew G. Knepley .seealso: PetscBag, PetscBagGetName(), PetscBagSetName(), PetscBagCreate(), PetscBagGetData() 1004ffb7e86cSMatthew G. Knepley PetscBagRegisterReal(), PetscBagRegisterInt(), PetscBagRegisterBool(), PetscBagRegisterScalar(), PetscBagRegisterEnum() 1005ffb7e86cSMatthew G. Knepley @*/ 1006ffb7e86cSMatthew G. Knepley PetscErrorCode PetscBagGetNames(PetscBag bag, const char *names[]) 1007ffb7e86cSMatthew G. Knepley { 1008ffb7e86cSMatthew G. Knepley PetscBagItem nitem = bag->bagitems; 1009ffb7e86cSMatthew G. Knepley PetscInt n; 1010ffb7e86cSMatthew G. Knepley 1011ffb7e86cSMatthew G. Knepley PetscFunctionBegin; 1012ffb7e86cSMatthew G. Knepley for (n = 0; nitem; ++n, nitem = nitem->next) {names[n] = nitem->name;} 1013ffb7e86cSMatthew G. Knepley PetscFunctionReturn(0); 1014ffb7e86cSMatthew G. Knepley } 1015