15f80ce2aSJacob Faibussowitsch #include <petsc/private/petscimpl.h> 2af0996ceSBarry Smith #include <petsc/private/bagimpl.h> /*I "petscbag.h" I*/ 3665c2dedSJed Brown #include <petscviewer.h> 45c6c1daeSBarry Smith 55c6c1daeSBarry Smith /* 65c6c1daeSBarry Smith Adds item to the linked list in a bag 75c6c1daeSBarry Smith */ 85c6c1daeSBarry Smith static PetscErrorCode PetscBagRegister_Private(PetscBag bag,PetscBagItem item,const char *name,const char *help) 95c6c1daeSBarry Smith { 105c6c1daeSBarry Smith PetscFunctionBegin; 119566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(item->name,name,PETSC_BAG_NAME_LENGTH-1)); 129566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(item->help,help,PETSC_BAG_HELP_LENGTH-1)); 135f80ce2aSJacob Faibussowitsch if (bag->bagitems) { 145c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 155f80ce2aSJacob Faibussowitsch 165f80ce2aSJacob Faibussowitsch while (nitem->next) nitem = nitem->next; 175c6c1daeSBarry Smith nitem->next = item; 185f80ce2aSJacob Faibussowitsch } else bag->bagitems = item; 195c6c1daeSBarry Smith bag->count++; 205c6c1daeSBarry Smith PetscFunctionReturn(0); 215c6c1daeSBarry Smith } 225c6c1daeSBarry Smith 235c6c1daeSBarry Smith /*@C 245c6c1daeSBarry Smith PetscBagRegisterEnum - add an enum value to the bag 255c6c1daeSBarry Smith 265c6c1daeSBarry Smith Logically Collective on PetscBag 275c6c1daeSBarry Smith 28d8d19677SJose E. Roman Input Parameters: 295c6c1daeSBarry Smith + bag - the bag of values 305c6c1daeSBarry Smith . addr - location of enum in struct 315c6c1daeSBarry Smith . mdefault - the initial value 325c6c1daeSBarry Smith . list - array of strings containing names of enum values followed by enum name followed by enum prefix 335c6c1daeSBarry Smith - help - longer string with more information about the value 345c6c1daeSBarry Smith 355c6c1daeSBarry Smith Level: beginner 365c6c1daeSBarry Smith 37db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 38db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 39db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()` 405c6c1daeSBarry Smith 415c6c1daeSBarry Smith @*/ 425c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterEnum(PetscBag bag,void *addr,const char *const *list,PetscEnum mdefault, const char *name, const char *help) 435c6c1daeSBarry Smith { 445c6c1daeSBarry Smith PetscBagItem item; 455c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 465c6c1daeSBarry Smith PetscBool printhelp; 475c6c1daeSBarry Smith PetscInt i = 0; 485c6c1daeSBarry Smith 495c6c1daeSBarry Smith PetscFunctionBegin; 505f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 515f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 525f80ce2aSJacob Faibussowitsch PetscValidPointer(list,3); 535f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,5); 545f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,6); 555c6c1daeSBarry Smith nname[0] = '-'; 565c6c1daeSBarry Smith nname[1] = 0; 579566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 589566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 595c6c1daeSBarry Smith if (printhelp) { 605c6c1daeSBarry Smith while (list[i++]) ; 619566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: (%s) %s (choose one of) ",bag->bagprefix ? bag->bagprefix : "",name,list[mdefault],list[i-3],help)); 629566063dSJacob Faibussowitsch for (i=0; list[i+2]; i++) PetscCall((*PetscHelpPrintf)(bag->bagcomm," %s",list[i])); 639566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm,"\n")); 645c6c1daeSBarry Smith } 659566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetEnum(NULL,bag->bagprefix,nname,list,&mdefault,NULL)); 665c6c1daeSBarry Smith 679566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 685c6c1daeSBarry Smith item->dtype = PETSC_ENUM; 695c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 705f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 7102c9f0b5SLisandro Dalcin item->next = NULL; 725c6c1daeSBarry Smith item->msize = 1; 739566063dSJacob Faibussowitsch PetscCall(PetscStrArrayallocpy(list,(char***)&item->list)); 745c6c1daeSBarry Smith *(PetscEnum*)addr = mdefault; 759566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 765c6c1daeSBarry Smith PetscFunctionReturn(0); 775c6c1daeSBarry Smith } 785c6c1daeSBarry Smith 795c6c1daeSBarry Smith /*@C 805c6c1daeSBarry Smith PetscBagRegisterIntArray - add an integer value to the bag 815c6c1daeSBarry Smith 825c6c1daeSBarry Smith Logically Collective on PetscBag 835c6c1daeSBarry Smith 84d8d19677SJose E. Roman Input Parameters: 855c6c1daeSBarry Smith + bag - the bag of values 865c6c1daeSBarry Smith . addr - location of integer in struct 875c6c1daeSBarry Smith . msize - number of entries in array 885c6c1daeSBarry Smith . name - name of the integer array 895c6c1daeSBarry Smith - help - longer string with more information about the value 905c6c1daeSBarry Smith 915c6c1daeSBarry Smith Level: beginner 925c6c1daeSBarry Smith 93db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 94db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 95db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 965c6c1daeSBarry Smith 975c6c1daeSBarry Smith @*/ 985c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterIntArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 995c6c1daeSBarry Smith { 1005c6c1daeSBarry Smith PetscBagItem item; 1015c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 1025c6c1daeSBarry Smith PetscBool printhelp; 1035c6c1daeSBarry Smith PetscInt i,tmp = msize; 1045c6c1daeSBarry Smith 1055c6c1daeSBarry Smith PetscFunctionBegin; 1065f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 1075f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 1085f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,4); 1095f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,5); 1105c6c1daeSBarry Smith nname[0] = '-'; 1115c6c1daeSBarry Smith nname[1] = 0; 1129566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 1139566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 1145c6c1daeSBarry Smith if (printhelp) { 1159566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name)); 1165c6c1daeSBarry Smith for (i=0; i<msize; i++) { 1179566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm,"%" PetscInt_FMT " ",*((PetscInt*)addr)+i)); 1185c6c1daeSBarry Smith } 1199566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help)); 1205c6c1daeSBarry Smith } 1219566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetIntArray(NULL,bag->bagprefix,nname,(PetscInt*)addr,&tmp,NULL)); 1225c6c1daeSBarry Smith 1239566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 1245c6c1daeSBarry Smith item->dtype = PETSC_INT; 1255c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 1265f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 12702c9f0b5SLisandro Dalcin item->next = NULL; 1285c6c1daeSBarry Smith item->msize = msize; 1299566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 1305c6c1daeSBarry Smith PetscFunctionReturn(0); 1315c6c1daeSBarry Smith } 1325c6c1daeSBarry Smith 1335c6c1daeSBarry Smith /*@C 1345c6c1daeSBarry Smith PetscBagRegisterRealArray - add an real array to the bag 1355c6c1daeSBarry Smith 1365c6c1daeSBarry Smith Logically Collective on PetscBag 1375c6c1daeSBarry Smith 138d8d19677SJose E. Roman Input Parameters: 1395c6c1daeSBarry Smith + bag - the bag of values 1405c6c1daeSBarry Smith . addr - location of real array in struct 1415c6c1daeSBarry Smith . msize - number of entries in array 1425c6c1daeSBarry Smith . name - name of the integer array 1435c6c1daeSBarry Smith - help - longer string with more information about the value 1445c6c1daeSBarry Smith 1455c6c1daeSBarry Smith Level: beginner 1465c6c1daeSBarry Smith 147db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 148db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 149db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 1505c6c1daeSBarry Smith 1515c6c1daeSBarry Smith @*/ 1525c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterRealArray(PetscBag bag,void *addr,PetscInt msize, const char *name, const char *help) 1535c6c1daeSBarry Smith { 1545c6c1daeSBarry Smith PetscBagItem item; 1555c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 1565c6c1daeSBarry Smith PetscBool printhelp; 1575c6c1daeSBarry Smith PetscInt i,tmp = msize; 1585c6c1daeSBarry Smith 1595c6c1daeSBarry Smith PetscFunctionBegin; 1605f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 1615f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 1625f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,4); 1635f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,5); 1645c6c1daeSBarry Smith nname[0] = '-'; 1655c6c1daeSBarry Smith nname[1] = 0; 1669566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 1679566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 1685c6c1daeSBarry Smith if (printhelp) { 1699566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix ? bag->bagprefix : "",name)); 1705c6c1daeSBarry Smith for (i=0; i<msize; i++) { 1719566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm,"%g ",(double)*((PetscReal*)addr)+i)); 1725c6c1daeSBarry Smith } 1739566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help)); 1745c6c1daeSBarry Smith } 1759566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetRealArray(NULL,bag->bagprefix,nname,(PetscReal*)addr,&tmp,NULL)); 1765c6c1daeSBarry Smith 1779566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 1785c6c1daeSBarry Smith item->dtype = PETSC_REAL; 1795c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 1805f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 18102c9f0b5SLisandro Dalcin item->next = NULL; 1825c6c1daeSBarry Smith item->msize = msize; 1839566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 1845c6c1daeSBarry Smith PetscFunctionReturn(0); 1855c6c1daeSBarry Smith } 1865c6c1daeSBarry Smith 1875c6c1daeSBarry Smith /*@C 1885c6c1daeSBarry Smith PetscBagRegisterInt - add an integer value to the bag 1895c6c1daeSBarry Smith 1905c6c1daeSBarry Smith Logically Collective on PetscBag 1915c6c1daeSBarry Smith 192d8d19677SJose E. Roman Input Parameters: 1935c6c1daeSBarry Smith + bag - the bag of values 1945c6c1daeSBarry Smith . addr - location of integer in struct 1955c6c1daeSBarry Smith . mdefault - the initial value 1965c6c1daeSBarry Smith . name - name of the integer 1975c6c1daeSBarry Smith - help - longer string with more information about the value 1985c6c1daeSBarry Smith 1995c6c1daeSBarry Smith Level: beginner 2005c6c1daeSBarry Smith 201db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 202db781477SPatrick Sanan `PetscBagRegisterInt64()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 203db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 2045c6c1daeSBarry Smith 2055c6c1daeSBarry Smith @*/ 2065c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterInt(PetscBag bag,void *addr,PetscInt mdefault,const char *name,const char *help) 2075c6c1daeSBarry Smith { 2085c6c1daeSBarry Smith PetscBagItem item; 2095c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 2105c6c1daeSBarry Smith PetscBool printhelp; 2115c6c1daeSBarry Smith 2125c6c1daeSBarry Smith PetscFunctionBegin; 2135f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 2145f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 2155f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,4); 2165f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,5); 2175c6c1daeSBarry Smith nname[0] = '-'; 2185c6c1daeSBarry Smith nname[1] = 0; 2199566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 2209566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 2215c6c1daeSBarry Smith if (printhelp) { 2229566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <%" PetscInt_FMT ">: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help)); 2235c6c1daeSBarry Smith } 2249566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,bag->bagprefix,nname,&mdefault,NULL)); 2255c6c1daeSBarry Smith 2269566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 2275c6c1daeSBarry Smith item->dtype = PETSC_INT; 2285c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 2295f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 23002c9f0b5SLisandro Dalcin item->next = NULL; 2315c6c1daeSBarry Smith item->msize = 1; 2325c6c1daeSBarry Smith *(PetscInt*)addr = mdefault; 2339566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 2345c6c1daeSBarry Smith PetscFunctionReturn(0); 2355c6c1daeSBarry Smith } 2365c6c1daeSBarry Smith 2370d349d43SBarry Smith /*@C 238bafee8b4SSatish Balay PetscBagRegisterInt64 - add an integer value to the bag 2390d349d43SBarry Smith 2400d349d43SBarry Smith Logically Collective on PetscBag 2410d349d43SBarry Smith 242d8d19677SJose E. Roman Input Parameters: 2430d349d43SBarry Smith + bag - the bag of values 2440d349d43SBarry Smith . addr - location of integer in struct 2450d349d43SBarry Smith . mdefault - the initial value 2460d349d43SBarry Smith . name - name of the integer 2470d349d43SBarry Smith - help - longer string with more information about the value 2480d349d43SBarry Smith 2490d349d43SBarry Smith Level: beginner 2500d349d43SBarry Smith 251db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 252db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 253db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 2540d349d43SBarry Smith 2550d349d43SBarry Smith @*/ 256bafee8b4SSatish Balay PetscErrorCode PetscBagRegisterInt64(PetscBag bag,void *addr,PetscInt64 mdefault,const char *name,const char *help) 2570d349d43SBarry Smith { 2580d349d43SBarry Smith PetscBagItem item; 2590d349d43SBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 2600d349d43SBarry Smith PetscBool printhelp; 2610d349d43SBarry Smith PetscInt odefault = (PetscInt)mdefault; 2620d349d43SBarry Smith PetscBool flg; 2630d349d43SBarry Smith 2640d349d43SBarry Smith PetscFunctionBegin; 2650d349d43SBarry Smith nname[0] = '-'; 2660d349d43SBarry Smith nname[1] = 0; 2679566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 2689566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 2690d349d43SBarry Smith if (printhelp) { 2709566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <%" PetscInt_FMT ">: %s \n",bag->bagprefix ? bag->bagprefix : "",name,odefault,help)); 2710d349d43SBarry Smith } 2729566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL,bag->bagprefix,nname,&odefault,&flg)); 273bafee8b4SSatish Balay if (flg) mdefault = (PetscInt64)odefault; 2740d349d43SBarry Smith 2759566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 2760d349d43SBarry Smith item->dtype = PETSC_INT; 2770d349d43SBarry Smith item->offset = ((char*)addr) - ((char*)bag); 2785f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 27902c9f0b5SLisandro Dalcin item->next = NULL; 2800d349d43SBarry Smith item->msize = 1; 281bafee8b4SSatish Balay *(PetscInt64*)addr = mdefault; 2829566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 2830d349d43SBarry Smith PetscFunctionReturn(0); 2840d349d43SBarry Smith } 2850d349d43SBarry Smith 286dd66f111SBlaise Bourdin /*@C 287dd66f111SBlaise Bourdin PetscBagRegisterBoolArray - add a n logical values to the bag 288dd66f111SBlaise Bourdin 289dd66f111SBlaise Bourdin Logically Collective on PetscBag 290dd66f111SBlaise Bourdin 291d8d19677SJose E. Roman Input Parameters: 292dd66f111SBlaise Bourdin + bag - the bag of values 293dd66f111SBlaise Bourdin . addr - location of boolean array in struct 294dd66f111SBlaise Bourdin . msize - number of entries in array 295dd66f111SBlaise Bourdin . name - name of the boolean array 296dd66f111SBlaise Bourdin - help - longer string with more information about the value 297dd66f111SBlaise Bourdin 298dd66f111SBlaise Bourdin Level: beginner 299dd66f111SBlaise Bourdin 300db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 301db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 302db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 303dd66f111SBlaise Bourdin 304dd66f111SBlaise Bourdin @*/ 305dd66f111SBlaise Bourdin PetscErrorCode PetscBagRegisterBoolArray(PetscBag bag,void *addr,PetscInt msize, const char* name, const char* help) 306dd66f111SBlaise Bourdin { 307dd66f111SBlaise Bourdin PetscBagItem item; 308dd66f111SBlaise Bourdin char nname[PETSC_BAG_NAME_LENGTH+1]; 309dd66f111SBlaise Bourdin PetscBool printhelp; 310dd66f111SBlaise Bourdin PetscInt i,tmp = msize; 311dd66f111SBlaise Bourdin 312dd66f111SBlaise Bourdin PetscFunctionBegin; 3135f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 3145f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 3155f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,4); 3165f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,5); 317dd66f111SBlaise Bourdin nname[0] = '-'; 318dd66f111SBlaise Bourdin nname[1] = 0; 3199566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 3209566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 321dd66f111SBlaise Bourdin if (printhelp) { 3229566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <",bag->bagprefix?bag->bagprefix:"",name)); 323dd66f111SBlaise Bourdin for (i=0; i<msize; i++) { 3249566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm,"%" PetscInt_FMT " ",*((PetscInt*)addr)+i)); 325dd66f111SBlaise Bourdin } 3269566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm,">: %s \n",help)); 327dd66f111SBlaise Bourdin } 3289566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBoolArray(NULL,bag->bagprefix,nname,(PetscBool*)addr,&tmp,NULL)); 329dd66f111SBlaise Bourdin 3309566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 331dd66f111SBlaise Bourdin item->dtype = PETSC_BOOL; 332dd66f111SBlaise Bourdin item->offset = ((char*)addr) - ((char*)bag); 3335f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 33402c9f0b5SLisandro Dalcin item->next = NULL; 335dd66f111SBlaise Bourdin item->msize = msize; 3369566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 337dd66f111SBlaise Bourdin PetscFunctionReturn(0); 338dd66f111SBlaise Bourdin } 339dd66f111SBlaise Bourdin 3405c6c1daeSBarry Smith /*@C 3415c6c1daeSBarry Smith PetscBagRegisterString - add a string value to the bag 3425c6c1daeSBarry Smith 3435c6c1daeSBarry Smith Logically Collective on PetscBag 3445c6c1daeSBarry Smith 345d8d19677SJose E. Roman Input Parameters: 3465c6c1daeSBarry Smith + bag - the bag of values 3475c6c1daeSBarry Smith . addr - location of start of string in struct 3485c6c1daeSBarry Smith . msize - length of the string space in the struct 3495c6c1daeSBarry Smith . mdefault - the initial value 3505c6c1daeSBarry Smith . name - name of the string 3515c6c1daeSBarry Smith - help - longer string with more information about the value 3525c6c1daeSBarry Smith 3535c6c1daeSBarry Smith Level: beginner 3545c6c1daeSBarry Smith 3555c6c1daeSBarry Smith Note: The struct should have the field char mystring[msize]; not char *mystring 3565c6c1daeSBarry Smith 357db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 358db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 359*c2e3fba1SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 3605c6c1daeSBarry Smith 3615c6c1daeSBarry Smith @*/ 3625c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterString(PetscBag bag,void *addr,PetscInt msize,const char* mdefault,const char* name,const char* help) 3635c6c1daeSBarry Smith { 3645c6c1daeSBarry Smith PetscBagItem item; 3655c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 3665c6c1daeSBarry Smith PetscBool printhelp; 3675c6c1daeSBarry Smith 3685c6c1daeSBarry Smith PetscFunctionBegin; 3695f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 3705f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 3715f80ce2aSJacob Faibussowitsch PetscValidCharPointer(mdefault,4); 3725f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,5); 3735f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,6); 3745c6c1daeSBarry Smith nname[0] = '-'; 3755c6c1daeSBarry Smith nname[1] = 0; 3769566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 3779566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 3785c6c1daeSBarry Smith if (printhelp) { 3799566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,mdefault,help)); 3805c6c1daeSBarry Smith } 3815c6c1daeSBarry Smith 3829566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 3835c6c1daeSBarry Smith item->dtype = PETSC_CHAR; 3845c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 3855f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 38602c9f0b5SLisandro Dalcin item->next = NULL; 3875c6c1daeSBarry Smith item->msize = msize; 3885c6c1daeSBarry Smith if (mdefault != (char*)addr) { 3899566063dSJacob Faibussowitsch PetscCall(PetscStrncpy((char*)addr,mdefault,msize-1)); 3905c6c1daeSBarry Smith } 3919566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL,bag->bagprefix,nname,(char*)addr,msize,NULL)); 3929566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 3935c6c1daeSBarry Smith PetscFunctionReturn(0); 3945c6c1daeSBarry Smith } 3955c6c1daeSBarry Smith 3965c6c1daeSBarry Smith /*@C 3975c6c1daeSBarry Smith PetscBagRegisterReal - add a real value to the bag 3985c6c1daeSBarry Smith 3995c6c1daeSBarry Smith Logically Collective on PetscBag 4005c6c1daeSBarry Smith 401d8d19677SJose E. Roman Input Parameters: 4025c6c1daeSBarry Smith + bag - the bag of values 4035c6c1daeSBarry Smith . addr - location of double in struct 4045c6c1daeSBarry Smith . mdefault - the initial value 4055c6c1daeSBarry Smith . name - name of the variable 4065c6c1daeSBarry Smith - help - longer string with more information about the value 4075c6c1daeSBarry Smith 4085c6c1daeSBarry Smith Level: beginner 4095c6c1daeSBarry Smith 410db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 411db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 412db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 4135c6c1daeSBarry Smith 4145c6c1daeSBarry Smith @*/ 4155c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterReal(PetscBag bag,void *addr,PetscReal mdefault, const char *name, const char *help) 4165c6c1daeSBarry Smith { 4175c6c1daeSBarry Smith PetscBagItem item; 4185c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 4195c6c1daeSBarry Smith PetscBool printhelp; 4205c6c1daeSBarry Smith 4215c6c1daeSBarry Smith PetscFunctionBegin; 4225f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 4235f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 4245f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,4); 4255f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,5); 4265c6c1daeSBarry Smith nname[0] = '-'; 4275c6c1daeSBarry Smith nname[1] = 0; 4289566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 4299566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 4305c6c1daeSBarry Smith if (printhelp) { 4319566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)mdefault,help)); 4325c6c1daeSBarry Smith } 4339566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetReal(NULL,bag->bagprefix,nname,&mdefault,NULL)); 4345c6c1daeSBarry Smith 4359566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 4365c6c1daeSBarry Smith item->dtype = PETSC_REAL; 4375c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 4385f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 43902c9f0b5SLisandro Dalcin item->next = NULL; 4405c6c1daeSBarry Smith item->msize = 1; 4415c6c1daeSBarry Smith *(PetscReal*)addr = mdefault; 4429566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 4435c6c1daeSBarry Smith PetscFunctionReturn(0); 4445c6c1daeSBarry Smith } 4455c6c1daeSBarry Smith 4465c6c1daeSBarry Smith /*@C 4475c6c1daeSBarry Smith PetscBagRegisterScalar - add a real or complex number value to the bag 4485c6c1daeSBarry Smith 4495c6c1daeSBarry Smith Logically Collective on PetscBag 4505c6c1daeSBarry Smith 451d8d19677SJose E. Roman Input Parameters: 4525c6c1daeSBarry Smith + bag - the bag of values 4535c6c1daeSBarry Smith . addr - location of scalar in struct 4545c6c1daeSBarry Smith . mdefault - the initial value 4555c6c1daeSBarry Smith . name - name of the variable 4565c6c1daeSBarry Smith - help - longer string with more information about the value 4575c6c1daeSBarry Smith 4585c6c1daeSBarry Smith Level: beginner 4595c6c1daeSBarry Smith 460db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 461db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 462db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 4635c6c1daeSBarry Smith 4645c6c1daeSBarry Smith @*/ 4655c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterScalar(PetscBag bag,void *addr,PetscScalar mdefault,const char *name,const char *help) 4665c6c1daeSBarry Smith { 4675c6c1daeSBarry Smith PetscBagItem item; 4685c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 4695c6c1daeSBarry Smith PetscBool printhelp; 4705c6c1daeSBarry Smith 4715c6c1daeSBarry Smith PetscFunctionBegin; 4725f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 4735f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 4745f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,4); 4755f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,5); 4765c6c1daeSBarry Smith nname[0] = '-'; 4775c6c1daeSBarry Smith nname[1] = 0; 4789566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 4799566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 4805c6c1daeSBarry Smith if (printhelp) { 4819566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <%g + %gi>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,(double)PetscRealPart(mdefault),(double)PetscImaginaryPart(mdefault),help)); 4825c6c1daeSBarry Smith } 4839566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetScalar(NULL,bag->bagprefix,nname,&mdefault,NULL)); 4845c6c1daeSBarry Smith 4859566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 4865c6c1daeSBarry Smith item->dtype = PETSC_SCALAR; 4875c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 4885f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 48902c9f0b5SLisandro Dalcin item->next = NULL; 4905c6c1daeSBarry Smith item->msize = 1; 4915c6c1daeSBarry Smith *(PetscScalar*)addr = mdefault; 4929566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 4935c6c1daeSBarry Smith PetscFunctionReturn(0); 4945c6c1daeSBarry Smith } 4955c6c1daeSBarry Smith 4965c6c1daeSBarry Smith /*@C 4975c6c1daeSBarry Smith PetscBagRegisterBool - add a logical value to the bag 4985c6c1daeSBarry Smith 4995c6c1daeSBarry Smith Logically Collective on PetscBag 5005c6c1daeSBarry Smith 501d8d19677SJose E. Roman Input Parameters: 5025c6c1daeSBarry Smith + bag - the bag of values 5035c6c1daeSBarry Smith . addr - location of logical in struct 5045c6c1daeSBarry Smith . mdefault - the initial value 5055c6c1daeSBarry Smith . name - name of the variable 5065c6c1daeSBarry Smith - help - longer string with more information about the value 5075c6c1daeSBarry Smith 5085c6c1daeSBarry Smith Level: beginner 5095c6c1daeSBarry Smith 510db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 511db781477SPatrick Sanan `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 512db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 5135c6c1daeSBarry Smith 5145c6c1daeSBarry Smith @*/ 5155c6c1daeSBarry Smith PetscErrorCode PetscBagRegisterBool(PetscBag bag,void *addr,PetscBool mdefault,const char *name,const char *help) 5165c6c1daeSBarry Smith { 5175c6c1daeSBarry Smith PetscBagItem item; 5185c6c1daeSBarry Smith char nname[PETSC_BAG_NAME_LENGTH+1]; 5195c6c1daeSBarry Smith PetscBool printhelp; 5205c6c1daeSBarry Smith 5215c6c1daeSBarry Smith PetscFunctionBegin; 5225f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 5235f80ce2aSJacob Faibussowitsch PetscValidPointer(addr,2); 5245f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,4); 5255f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,5); 5265c6c1daeSBarry Smith /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 5275f80ce2aSJacob Faibussowitsch PetscCheck(mdefault == PETSC_FALSE || mdefault == PETSC_TRUE,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Boolean %s %s must be boolean; integer value %d",name,help,(int)mdefault); 5285c6c1daeSBarry Smith nname[0] = '-'; 5295c6c1daeSBarry Smith nname[1] = 0; 5309566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(nname,name,PETSC_BAG_NAME_LENGTH)); 5319566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasHelp(NULL,&printhelp)); 5325c6c1daeSBarry Smith if (printhelp) { 5339566063dSJacob Faibussowitsch PetscCall((*PetscHelpPrintf)(bag->bagcomm," -%s%s <%s>: %s \n",bag->bagprefix ? bag->bagprefix : "",name,PetscBools[mdefault],help)); 5345c6c1daeSBarry Smith } 5359566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL,bag->bagprefix,nname,&mdefault,NULL)); 5365c6c1daeSBarry Smith 5379566063dSJacob Faibussowitsch PetscCall(PetscNew(&item)); 5385c6c1daeSBarry Smith item->dtype = PETSC_BOOL; 5395c6c1daeSBarry Smith item->offset = ((char*)addr) - ((char*)bag); 5405f80ce2aSJacob Faibussowitsch PetscCheck(item->offset <= bag->bagsize,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Registered item %s %s is not in bag memory space",name,help); 54102c9f0b5SLisandro Dalcin item->next = NULL; 5425c6c1daeSBarry Smith item->msize = 1; 5435c6c1daeSBarry Smith *(PetscBool*)addr = mdefault; 5449566063dSJacob Faibussowitsch PetscCall(PetscBagRegister_Private(bag,item,name,help)); 5455c6c1daeSBarry Smith PetscFunctionReturn(0); 5465c6c1daeSBarry Smith } 5475c6c1daeSBarry Smith 5485c6c1daeSBarry Smith /*@C 5495c6c1daeSBarry Smith PetscBagDestroy - Destroys a bag values 5505c6c1daeSBarry Smith 5515c6c1daeSBarry Smith Collective on PetscBag 5525c6c1daeSBarry Smith 5535c6c1daeSBarry Smith Input Parameter: 5545c6c1daeSBarry Smith . bag - the bag of values 5555c6c1daeSBarry Smith 5565c6c1daeSBarry Smith Level: beginner 5575c6c1daeSBarry Smith 558db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 559db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 560db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 5615c6c1daeSBarry Smith 5625c6c1daeSBarry Smith @*/ 5635c6c1daeSBarry Smith PetscErrorCode PetscBagDestroy(PetscBag *bag) 5645c6c1daeSBarry Smith { 5655f80ce2aSJacob Faibussowitsch PetscBagItem nitem; 5665c6c1daeSBarry Smith 5675c6c1daeSBarry Smith PetscFunctionBegin; 5685f80ce2aSJacob Faibussowitsch if (!*bag) PetscFunctionReturn(0); 5695f80ce2aSJacob Faibussowitsch PetscValidPointer(*bag,1); 5705f80ce2aSJacob Faibussowitsch nitem = (*bag)->bagitems; 5715c6c1daeSBarry Smith while (nitem) { 5725f80ce2aSJacob Faibussowitsch PetscBagItem item = nitem->next; 5735f80ce2aSJacob Faibussowitsch 5749566063dSJacob Faibussowitsch if (nitem->list) PetscCall(PetscStrArrayDestroy(&nitem->list)); 5759566063dSJacob Faibussowitsch PetscCall(PetscFree(nitem)); 5765c6c1daeSBarry Smith nitem = item; 5775c6c1daeSBarry Smith } 5789566063dSJacob Faibussowitsch if ((*bag)->bagprefix) PetscCall(PetscFree((*bag)->bagprefix)); 5799566063dSJacob Faibussowitsch PetscCall(PetscFree(*bag)); 5805c6c1daeSBarry Smith PetscFunctionReturn(0); 5815c6c1daeSBarry Smith } 5825c6c1daeSBarry Smith 5835c6c1daeSBarry Smith /*@ 5845c6c1daeSBarry Smith PetscBagSetFromOptions - Allows setting options from a bag 5855c6c1daeSBarry Smith 5865c6c1daeSBarry Smith Collective on PetscBag 5875c6c1daeSBarry Smith 5885c6c1daeSBarry Smith Input Parameter: 5895c6c1daeSBarry Smith . bag - the bag of values 5905c6c1daeSBarry Smith 5915c6c1daeSBarry Smith Level: beginner 5925c6c1daeSBarry Smith 593db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagDestroy()`, `PetscBagLoad()`, `PetscBagGetData()` 594db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 595db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagView()`, `PetscBagRegisterEnum()` 5965c6c1daeSBarry Smith 5975c6c1daeSBarry Smith @*/ 5985c6c1daeSBarry Smith PetscErrorCode PetscBagSetFromOptions(PetscBag bag) 5995c6c1daeSBarry Smith { 6005c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 6015c6c1daeSBarry Smith char name[PETSC_BAG_NAME_LENGTH+1],helpname[PETSC_BAG_NAME_LENGTH+PETSC_BAG_HELP_LENGTH+3]; 6025c6c1daeSBarry Smith PetscInt n; 6035c6c1daeSBarry Smith 6045c6c1daeSBarry Smith PetscFunctionBegin; 6055f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 6069566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(helpname,bag->bagname,sizeof(helpname))); 6079566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(helpname," ",sizeof(helpname))); 6089566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(helpname,bag->baghelp,sizeof(helpname))); 609d0609cedSBarry Smith PetscOptionsBegin(bag->bagcomm,bag->bagprefix,helpname,NULL); 6105c6c1daeSBarry Smith while (nitem) { 6115c6c1daeSBarry Smith name[0] = '-'; 6125c6c1daeSBarry Smith name[1] = 0; 6139566063dSJacob Faibussowitsch PetscCall(PetscStrlcat(name,nitem->name,sizeof(name))); 6145c6c1daeSBarry Smith if (nitem->dtype == PETSC_CHAR) { /* special handling for fortran required? [due to space padding vs null termination] */ 6155c6c1daeSBarry Smith char *value = (char*)(((char*)bag) + nitem->offset); 6169566063dSJacob Faibussowitsch PetscCall(PetscOptionsString(name,nitem->help,"",value,value,nitem->msize,NULL)); 6175c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_REAL) { 6185c6c1daeSBarry Smith PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 6195c6c1daeSBarry Smith if (nitem->msize == 1) { 6209566063dSJacob Faibussowitsch PetscCall(PetscOptionsReal(name,nitem->help,"",*value,value,NULL)); 6215c6c1daeSBarry Smith } else { 6225c6c1daeSBarry Smith n = nitem->msize; 6239566063dSJacob Faibussowitsch PetscCall(PetscOptionsRealArray(name,nitem->help,"",value,&n,NULL)); 6245c6c1daeSBarry Smith } 6255c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_SCALAR) { 6265c6c1daeSBarry Smith PetscScalar *value = (PetscScalar*)(((char*)bag) + nitem->offset); 6279566063dSJacob Faibussowitsch PetscCall(PetscOptionsScalar(name,nitem->help,"",*value,value,NULL)); 6285c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_INT) { 6295c6c1daeSBarry Smith PetscInt *value = (PetscInt*)(((char*)bag) + nitem->offset); 6305c6c1daeSBarry Smith if (nitem->msize == 1) { 6319566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt(name,nitem->help,"",*value,value,NULL)); 6325c6c1daeSBarry Smith } else { 6335c6c1daeSBarry Smith n = nitem->msize; 6349566063dSJacob Faibussowitsch PetscCall(PetscOptionsIntArray(name,nitem->help,"",value,&n,NULL)); 6355c6c1daeSBarry Smith } 6365c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_ENUM) { 6375c6c1daeSBarry Smith PetscEnum *value = (PetscEnum*)(((char*)bag) + nitem->offset); 6385c6c1daeSBarry Smith PetscInt i = 0; 6395c6c1daeSBarry Smith while (nitem->list[i++]) ; 6409566063dSJacob Faibussowitsch PetscCall(PetscOptionsEnum(name,nitem->help,nitem->list[i-3],(const char*const*)nitem->list,*value,value,NULL)); 6415c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_BOOL) { 6425c6c1daeSBarry Smith PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 643dd66f111SBlaise Bourdin if (nitem->msize == 1) { 6449566063dSJacob Faibussowitsch PetscCall(PetscOptionsBool(name,nitem->help,"",*value,value,NULL)); 645dd66f111SBlaise Bourdin } else { 646dd66f111SBlaise Bourdin n = nitem->msize; 6479566063dSJacob Faibussowitsch PetscCall(PetscOptionsBoolArray(name,nitem->help,"",value,&n,NULL)); 648dd66f111SBlaise Bourdin } 6495c6c1daeSBarry Smith } 6505c6c1daeSBarry Smith nitem = nitem->next; 6515c6c1daeSBarry Smith } 652d0609cedSBarry Smith PetscOptionsEnd(); 6535c6c1daeSBarry Smith PetscFunctionReturn(0); 6545c6c1daeSBarry Smith } 6555c6c1daeSBarry Smith 6565c6c1daeSBarry Smith /*@C 6575c6c1daeSBarry Smith PetscBagView - Views a bag of values as either ASCII text or a binary file 6585c6c1daeSBarry Smith 6595c6c1daeSBarry Smith Collective on PetscBag 6605c6c1daeSBarry Smith 661d8d19677SJose E. Roman Input Parameters: 6625c6c1daeSBarry Smith + bag - the bag of values 6635c6c1daeSBarry Smith - viewer - location to view the values 6645c6c1daeSBarry Smith 6655c6c1daeSBarry Smith Level: beginner 6665c6c1daeSBarry Smith 6675c6c1daeSBarry Smith Warning: Currently PETSc bags saved in a binary file can only be read back 6685c6c1daeSBarry Smith in on a machine of the same architecture. Let us know when this is a problem 6695c6c1daeSBarry Smith and we'll fix it. 6705c6c1daeSBarry Smith 671db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagDestroy()`, `PetscBagLoad()`, `PetscBagGetData()` 672db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`, `PetscBagRegisterEnum()` 673db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()` 6745c6c1daeSBarry Smith 6755c6c1daeSBarry Smith @*/ 6765c6c1daeSBarry Smith PetscErrorCode PetscBagView(PetscBag bag,PetscViewer view) 6775c6c1daeSBarry Smith { 6785c6c1daeSBarry Smith PetscBool isascii,isbinary; 6795c6c1daeSBarry Smith PetscBagItem nitem = bag->bagitems; 6805c6c1daeSBarry Smith 6815c6c1daeSBarry Smith PetscFunctionBegin; 6825f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 6835f80ce2aSJacob Faibussowitsch PetscValidHeaderSpecific(view,PETSC_VIEWER_CLASSID,2); 6849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERASCII,&isascii)); 6859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary)); 6865c6c1daeSBarry Smith if (isascii) { 6873ffde785SBarry Smith if (bag->bagprefix) { 6889566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view,"PetscBag Object: %s (%s) %s\n",bag->bagname,bag->bagprefix,bag->baghelp)); 6893ffde785SBarry Smith } else { 6909566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view,"PetscBag Object: %s %s\n",bag->bagname,bag->baghelp)); 6913ffde785SBarry Smith } 6925c6c1daeSBarry Smith while (nitem) { 6935c6c1daeSBarry Smith if (nitem->dtype == PETSC_CHAR) { 6945c6c1daeSBarry Smith char *value = (char*)(((char*)bag) + nitem->offset); 6955c6c1daeSBarry Smith char tmp = value[nitem->msize-1]; /* special handling for fortran chars wihout null terminator */ 6965c6c1daeSBarry Smith value[nitem->msize-1] =0; 6979566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = %s; %s\n",nitem->name,value,nitem->help)); 6985c6c1daeSBarry Smith value[nitem->msize-1] = tmp; 6995c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_REAL) { 7005c6c1daeSBarry Smith PetscReal *value = (PetscReal*)(((char*)bag) + nitem->offset); 7015c6c1daeSBarry Smith PetscInt i; 7029566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = ",nitem->name)); 7035c6c1daeSBarry Smith for (i=0; i<nitem->msize; i++) { 7049566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view,"%g ",(double)value[i])); 7055c6c1daeSBarry Smith } 7069566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view,"; %s\n",nitem->help)); 7075c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_SCALAR) { 7085c6c1daeSBarry Smith PetscScalar value = *(PetscScalar*)(((char*)bag) + nitem->offset); 7095c6c1daeSBarry Smith #if defined(PETSC_USE_COMPLEX) 7108627564fSBarry Smith if ((double)PetscImaginaryPart(value)) { 7119566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = %g + %gi; %s\n",nitem->name,(double)PetscRealPart(value),(double)PetscImaginaryPart(value),nitem->help)); 7128627564fSBarry Smith } else { 7139566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = %g; %s\n",nitem->name,(double)PetscRealPart(value),nitem->help)); 7148627564fSBarry Smith } 7155c6c1daeSBarry Smith #else 7169566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = %g; %s\n",nitem->name,(double)value,nitem->help)); 7175c6c1daeSBarry Smith #endif 7185c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_INT) { 7195c6c1daeSBarry Smith PetscInt i,*value = (PetscInt*)(((char*)bag) + nitem->offset); 7209566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = ",nitem->name)); 7215c6c1daeSBarry Smith for (i=0; i<nitem->msize; i++) { 7229566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view,"%" PetscInt_FMT " ",value[i])); 7235c6c1daeSBarry Smith } 7249566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view,"; %s\n",nitem->help)); 7255c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_BOOL) { 726dd66f111SBlaise Bourdin PetscBool *value = (PetscBool*)(((char*)bag) + nitem->offset); 727dd66f111SBlaise Bourdin PetscInt i; 7285c6c1daeSBarry Smith /* some Fortran compilers use -1 as boolean */ 7299566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = ",nitem->name)); 730dd66f111SBlaise Bourdin for (i=0; i<nitem->msize; i++) { 731dd66f111SBlaise Bourdin if (((int) value[i]) == -1) value[i] = PETSC_TRUE; 7325c6c1daeSBarry Smith /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */ 7335f80ce2aSJacob Faibussowitsch PetscCheck(value[i] == PETSC_FALSE || value[i] == PETSC_TRUE,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Boolean value for %s %s is corrupt; integer value %" PetscInt_FMT,nitem->name,nitem->help,(PetscInt)(value[i])); 7349566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s",PetscBools[value[i]])); 735dd66f111SBlaise Bourdin } 7369566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view,"; %s\n",nitem->help)); 7375c6c1daeSBarry Smith } else if (nitem->dtype == PETSC_ENUM) { 7385c6c1daeSBarry Smith PetscEnum value = *(PetscEnum*)(((char*)bag) + nitem->offset); 7395c6c1daeSBarry Smith PetscInt i = 0; 7405c6c1daeSBarry Smith while (nitem->list[i++]) ; 7419566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(view," %s = %s; (%s) %s\n",nitem->name,nitem->list[value],nitem->list[i-3],nitem->help)); 7425c6c1daeSBarry Smith } 7435c6c1daeSBarry Smith nitem = nitem->next; 7445c6c1daeSBarry Smith } 7455c6c1daeSBarry Smith } else if (isbinary) { 7465c6c1daeSBarry Smith PetscInt classid = PETSC_BAG_FILE_CLASSID, dtype; 7475c6c1daeSBarry Smith PetscInt deprecatedbagsize = 0; 748a261c58fSBarry Smith PetscViewerFormat format; 7499566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,&classid,1,PETSC_INT)); 7509566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,&deprecatedbagsize,1,PETSC_INT)); 7519566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,&bag->count,1,PETSC_INT)); 7529566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,bag->bagname,PETSC_BAG_NAME_LENGTH,PETSC_CHAR)); 7539566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,PETSC_CHAR)); 7545c6c1daeSBarry Smith while (nitem) { 7559566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,&nitem->offset,1,PETSC_INT)); 7565c6c1daeSBarry Smith dtype = (PetscInt)nitem->dtype; 7579566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,&dtype,1,PETSC_INT)); 7589566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,nitem->name,PETSC_BAG_NAME_LENGTH,PETSC_CHAR)); 7599566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,nitem->help,PETSC_BAG_HELP_LENGTH,PETSC_CHAR)); 7609566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,&nitem->msize,1,PETSC_INT)); 7615c6c1daeSBarry Smith /* some Fortran compilers use -1 as boolean */ 7625c6c1daeSBarry Smith if (dtype == PETSC_BOOL && ((*(int*) (((char*)bag) + nitem->offset) == -1))) *(int*) (((char*)bag) + nitem->offset) = PETSC_TRUE; 7635c6c1daeSBarry Smith 7649566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWrite(view,(((char*)bag) + nitem->offset),nitem->msize,nitem->dtype)); 7655c6c1daeSBarry Smith if (dtype == PETSC_ENUM) { 7669566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryWriteStringArray(view,(const char* const*)nitem->list)); 7675c6c1daeSBarry Smith } 7685c6c1daeSBarry Smith nitem = nitem->next; 7695c6c1daeSBarry Smith } 7709566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(view,&format)); 771a261c58fSBarry Smith if (format == PETSC_VIEWER_BINARY_MATLAB) { 772a261c58fSBarry Smith MPI_Comm comm; 773a261c58fSBarry Smith FILE *info; 7749566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)view,&comm)); 7759566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryGetInfoPointer(view,&info)); 7769566063dSJacob Faibussowitsch PetscCall(PetscFPrintf(comm,info,"#--- begin code written by PetscViewerBinary for MATLAB format ---#\n")); 7779566063dSJacob Faibussowitsch PetscCall(PetscFPrintf(comm,info,"#$$ Set.%s = PetscBinaryRead(fd);\n",bag->bagname)); 7789566063dSJacob Faibussowitsch PetscCall(PetscFPrintf(comm,info,"#--- end code written by PetscViewerBinary for MATLAB format ---#\n\n")); 779a261c58fSBarry Smith } 780a261c58fSBarry Smith } 7815c6c1daeSBarry Smith PetscFunctionReturn(0); 7825c6c1daeSBarry Smith } 7835c6c1daeSBarry Smith 7845c6c1daeSBarry Smith /*@C 785173f9484SMatthew G. Knepley PetscBagViewFromOptions - Processes command line options to determine if/how a PetscBag is to be viewed. 786173f9484SMatthew G. Knepley 787173f9484SMatthew G. Knepley Collective on PetscBag 788173f9484SMatthew G. Knepley 789173f9484SMatthew G. Knepley Input Parameters: 790173f9484SMatthew G. Knepley + obj - the object 791173f9484SMatthew G. Knepley . bobj - optional other object that provides prefix (if NULL then the prefix in obj is used) 792173f9484SMatthew G. Knepley - optionname - option to activate viewing 793478db826SMatthew G. Knepley 794173f9484SMatthew G. Knepley Level: intermediate 795478db826SMatthew G. Knepley 796db781477SPatrick Sanan .seealso: `PetscBagCreate()`, `PetscBag`, `PetscViewer` 797173f9484SMatthew G. Knepley @*/ 798173f9484SMatthew G. Knepley PetscErrorCode PetscBagViewFromOptions(PetscBag bag, PetscObject bobj, const char optionname[]) 799173f9484SMatthew G. Knepley { 800173f9484SMatthew G. Knepley static PetscBool incall = PETSC_FALSE; 801173f9484SMatthew G. Knepley PetscViewer viewer; 802173f9484SMatthew G. Knepley PetscViewerFormat format; 803173f9484SMatthew G. Knepley const char *prefix, *bprefix = NULL; 804173f9484SMatthew G. Knepley PetscBool flg; 805173f9484SMatthew G. Knepley 806173f9484SMatthew G. Knepley PetscFunctionBegin; 807173f9484SMatthew G. Knepley if (incall) PetscFunctionReturn(0); 808173f9484SMatthew G. Knepley incall = PETSC_TRUE; 8095f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 8109566063dSJacob Faibussowitsch if (bobj) PetscCall(PetscObjectGetOptionsPrefix(bobj, &bprefix)); 811173f9484SMatthew G. Knepley prefix = bobj ? bprefix : bag->bagprefix; 8129566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetViewer(bag->bagcomm, NULL, prefix, optionname, &viewer, &format, &flg)); 813173f9484SMatthew G. Knepley if (flg) { 8149566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(viewer, format)); 8159566063dSJacob Faibussowitsch PetscCall(PetscBagView(bag, viewer)); 8169566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 8179566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(viewer)); 8189566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&viewer)); 819173f9484SMatthew G. Knepley } 820173f9484SMatthew G. Knepley incall = PETSC_FALSE; 821173f9484SMatthew G. Knepley PetscFunctionReturn(0); 822173f9484SMatthew G. Knepley } 823173f9484SMatthew G. Knepley 824173f9484SMatthew G. Knepley /*@C 8255c6c1daeSBarry Smith PetscBagLoad - Loads a bag of values from a binary file 8265c6c1daeSBarry Smith 8275c6c1daeSBarry Smith Collective on PetscViewer 8285c6c1daeSBarry Smith 829d8d19677SJose E. Roman Input Parameters: 8305c6c1daeSBarry Smith + viewer - file to load values from 8315c6c1daeSBarry Smith - bag - the bag of values 8325c6c1daeSBarry Smith 83395452b02SPatrick Sanan Notes: 83495452b02SPatrick Sanan You must have created and registered all the fields in the bag before loading into it. 8355c6c1daeSBarry Smith 8365c6c1daeSBarry Smith Notes: 8375c6c1daeSBarry Smith Level: beginner 8385c6c1daeSBarry Smith 839db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagDestroy()`, `PetscBagView()`, `PetscBagGetData()` 840db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 841db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()` 8425c6c1daeSBarry Smith 8435c6c1daeSBarry Smith @*/ 8445c6c1daeSBarry Smith PetscErrorCode PetscBagLoad(PetscViewer view,PetscBag bag) 8455c6c1daeSBarry Smith { 8465c6c1daeSBarry Smith PetscBool isbinary; 8475f80ce2aSJacob Faibussowitsch PetscInt classid,bagcount,dtype,msize,offset,deprecatedbagsize; 8485c6c1daeSBarry Smith char name[PETSC_BAG_NAME_LENGTH],help[PETSC_BAG_HELP_LENGTH],**list; 8495c6c1daeSBarry Smith PetscBagItem nitem; 8505c6c1daeSBarry Smith MPI_Comm comm; 8515c6c1daeSBarry Smith PetscMPIInt flag; 8525c6c1daeSBarry Smith 8535c6c1daeSBarry Smith PetscFunctionBegin; 8545f80ce2aSJacob Faibussowitsch PetscValidHeaderSpecific(view,PETSC_VIEWER_CLASSID,1); 8555f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,2); 8569566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)view,&comm)); 8579566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_compare(comm,bag->bagcomm,&flag)); 8585f80ce2aSJacob Faibussowitsch PetscCheck(flag == MPI_CONGRUENT || flag == MPI_IDENT,PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"Different communicators in the viewer and bag"); 8599566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)view,PETSCVIEWERBINARY,&isbinary)); 8605f80ce2aSJacob Faibussowitsch PetscCheck(isbinary,PETSC_COMM_SELF,PETSC_ERR_SUP,"No support for this viewer type"); 8615c6c1daeSBarry Smith 8629566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,&classid,1,NULL,PETSC_INT)); 8635f80ce2aSJacob Faibussowitsch PetscCheck(classid == PETSC_BAG_FILE_CLASSID,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not PetscBag next in binary file"); 8649566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,&deprecatedbagsize,1,NULL,PETSC_INT)); 8659566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,&bagcount,1,NULL,PETSC_INT)); 8665f80ce2aSJacob Faibussowitsch PetscCheck(bagcount == bag->count,comm,PETSC_ERR_ARG_INCOMP,"Bag in file has different number of entries %d then passed in bag %d",(int)bagcount,(int)bag->count); 8679566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,bag->bagname,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR)); 8689566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,bag->baghelp,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR)); 8695c6c1daeSBarry Smith 8705c6c1daeSBarry Smith nitem = bag->bagitems; 8715f80ce2aSJacob Faibussowitsch for (PetscInt i=0; i<bagcount; i++) { 8729566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,&offset,1,NULL,PETSC_INT)); 8735c6c1daeSBarry Smith /* ignore the offset in the file */ 8749566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,&dtype,1,NULL,PETSC_INT)); 8759566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,name,PETSC_BAG_NAME_LENGTH,NULL,PETSC_CHAR)); 8769566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,help,PETSC_BAG_HELP_LENGTH,NULL,PETSC_CHAR)); 8779566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,&msize,1,NULL,PETSC_INT)); 8785c6c1daeSBarry Smith 8795c6c1daeSBarry Smith if (dtype == (PetscInt) PETSC_CHAR) { 8809566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_CHAR)); 8815c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_REAL) { 8829566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_REAL)); 8835c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_SCALAR) { 8849566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_SCALAR)); 8855c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_INT) { 8869566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_INT)); 8875c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_BOOL) { 8889566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,msize,NULL,PETSC_BOOL)); 8895c6c1daeSBarry Smith } else if (dtype == (PetscInt) PETSC_ENUM) { 8909566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryRead(view,((char*)bag)+nitem->offset,1,NULL,PETSC_ENUM)); 8919566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryReadStringArray(view,&list)); 8925c6c1daeSBarry Smith /* don't need to save list because it is already registered in the bag */ 8939566063dSJacob Faibussowitsch PetscCall(PetscFree(list)); 8945c6c1daeSBarry Smith } 8955c6c1daeSBarry Smith nitem = nitem->next; 8965c6c1daeSBarry Smith } 8975c6c1daeSBarry Smith PetscFunctionReturn(0); 8985c6c1daeSBarry Smith } 8995c6c1daeSBarry Smith 900e8976759SBarry Smith /*@C 9015c6c1daeSBarry Smith PetscBagCreate - Create a bag of values 9025c6c1daeSBarry Smith 903d083f849SBarry Smith Collective 9045c6c1daeSBarry Smith 9055c6c1daeSBarry Smith Level: Intermediate 9065c6c1daeSBarry Smith 9075c6c1daeSBarry Smith Input Parameters: 9085c6c1daeSBarry Smith + comm - communicator to share bag 9095c6c1daeSBarry Smith - bagsize - size of the C structure holding the values 9105c6c1daeSBarry Smith 9115c6c1daeSBarry Smith Output Parameter: 9125c6c1daeSBarry Smith . bag - the bag of values 9135c6c1daeSBarry Smith 9145c6c1daeSBarry Smith Notes: 9155c6c1daeSBarry Smith The size of the A struct must be small enough to fit in a PetscInt; by default 9165c6c1daeSBarry Smith PetscInt is 4 bytes; this means a bag cannot be larger than 2 gigabytes in length. 9175c6c1daeSBarry Smith The warning about casting to a shorter length can be ignored below unless your A struct is too large 9185c6c1daeSBarry Smith 919db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagGetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 920db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 921db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()` 9225c6c1daeSBarry Smith @*/ 9235c6c1daeSBarry Smith PetscErrorCode PetscBagCreate(MPI_Comm comm, size_t bagsize, PetscBag *bag) 9245c6c1daeSBarry Smith { 9255f80ce2aSJacob Faibussowitsch const size_t totalsize = bagsize+sizeof(struct _n_PetscBag)+sizeof(PetscScalar); 9265c6c1daeSBarry Smith 9275c6c1daeSBarry Smith PetscFunctionBegin; 9285f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,3); 9299566063dSJacob Faibussowitsch PetscCall(PetscInfo(NULL,"Creating Bag with total size %d\n",(int)totalsize)); 9309566063dSJacob Faibussowitsch PetscCall(PetscCalloc(totalsize,bag)); 931a297a907SKarl Rupp 9325f80ce2aSJacob Faibussowitsch (*bag)->bagsize = totalsize; 9335c6c1daeSBarry Smith (*bag)->bagcomm = comm; 9340298fd71SBarry Smith (*bag)->bagprefix = NULL; 9355c6c1daeSBarry Smith (*bag)->structlocation = (void*)(((char*)(*bag)) + sizeof(PetscScalar)*(sizeof(struct _n_PetscBag)/sizeof(PetscScalar)) + sizeof(PetscScalar)); 9365c6c1daeSBarry Smith PetscFunctionReturn(0); 9375c6c1daeSBarry Smith } 9385c6c1daeSBarry Smith 9395c6c1daeSBarry Smith /*@C 9405c6c1daeSBarry Smith PetscBagSetName - Sets the name of a bag of values 9415c6c1daeSBarry Smith 9425c6c1daeSBarry Smith Not Collective 9435c6c1daeSBarry Smith 9445c6c1daeSBarry Smith Level: Intermediate 9455c6c1daeSBarry Smith 9465c6c1daeSBarry Smith Input Parameters: 9475c6c1daeSBarry Smith + bag - the bag of values 9485c6c1daeSBarry Smith . name - the name assigned to the bag 9495c6c1daeSBarry Smith - help - help message for bag 9505c6c1daeSBarry Smith 951db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagGetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 952db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 953db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()` 9545c6c1daeSBarry Smith @*/ 9555c6c1daeSBarry Smith 9565c6c1daeSBarry Smith PetscErrorCode PetscBagSetName(PetscBag bag, const char *name, const char *help) 9575c6c1daeSBarry Smith { 9585c6c1daeSBarry Smith PetscFunctionBegin; 9595f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 9605f80ce2aSJacob Faibussowitsch PetscValidCharPointer(name,2); 9615f80ce2aSJacob Faibussowitsch PetscValidCharPointer(help,3); 9629566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(bag->bagname,name,PETSC_BAG_NAME_LENGTH-1)); 9639566063dSJacob Faibussowitsch PetscCall(PetscStrncpy(bag->baghelp,help,PETSC_BAG_HELP_LENGTH-1)); 9645c6c1daeSBarry Smith PetscFunctionReturn(0); 9655c6c1daeSBarry Smith } 9665c6c1daeSBarry Smith 9675c6c1daeSBarry Smith /*@C 9685c6c1daeSBarry Smith PetscBagGetName - Gets the name of a bag of values 9695c6c1daeSBarry Smith 9705c6c1daeSBarry Smith Not Collective 9715c6c1daeSBarry Smith 9725c6c1daeSBarry Smith Level: Intermediate 9735c6c1daeSBarry Smith 9745c6c1daeSBarry Smith Input Parameter: 9755c6c1daeSBarry Smith . bag - the bag of values 9765c6c1daeSBarry Smith 9775c6c1daeSBarry Smith Output Parameter: 9785c6c1daeSBarry Smith . name - the name assigned to the bag 9795c6c1daeSBarry Smith 980db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()` 981db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 982db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()` 9835c6c1daeSBarry Smith @*/ 9845c6c1daeSBarry Smith PetscErrorCode PetscBagGetName(PetscBag bag, char **name) 9855c6c1daeSBarry Smith { 9865c6c1daeSBarry Smith PetscFunctionBegin; 9875f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 9885f80ce2aSJacob Faibussowitsch PetscValidPointer(name,2); 9895c6c1daeSBarry Smith *name = bag->bagname; 9905c6c1daeSBarry Smith PetscFunctionReturn(0); 9915c6c1daeSBarry Smith } 9925c6c1daeSBarry Smith 9935c6c1daeSBarry Smith /*@C 9945c6c1daeSBarry Smith PetscBagGetData - Gives back the user - access to memory that 9955c6c1daeSBarry Smith should be used for storing user-data-structure 9965c6c1daeSBarry Smith 9975c6c1daeSBarry Smith Not Collective 9985c6c1daeSBarry Smith 9995c6c1daeSBarry Smith Level: Intermediate 10005c6c1daeSBarry Smith 10015c6c1daeSBarry Smith Input Parameter: 10025c6c1daeSBarry Smith . bag - the bag of values 10035c6c1daeSBarry Smith 10045c6c1daeSBarry Smith Output Parameter: 10055c6c1daeSBarry Smith . data - pointer to memory that will have user-data-structure 10065c6c1daeSBarry Smith 1007db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()` 1008db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 1009db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()` 10105c6c1daeSBarry Smith @*/ 10115c6c1daeSBarry Smith PetscErrorCode PetscBagGetData(PetscBag bag, void **data) 10125c6c1daeSBarry Smith { 10135c6c1daeSBarry Smith PetscFunctionBegin; 10145f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 10155f80ce2aSJacob Faibussowitsch PetscValidPointer(data,2); 10165c6c1daeSBarry Smith *data = bag->structlocation; 10175c6c1daeSBarry Smith PetscFunctionReturn(0); 10185c6c1daeSBarry Smith } 10195c6c1daeSBarry Smith 10205c6c1daeSBarry Smith /*@C 10215c6c1daeSBarry Smith PetscBagSetOptionsPrefix - Sets the prefix used for searching for all 10225c6c1daeSBarry Smith PetscBag items in the options database. 10235c6c1daeSBarry Smith 10245c6c1daeSBarry Smith Logically collective on Bag. 10255c6c1daeSBarry Smith 10265c6c1daeSBarry Smith Level: Intermediate 10275c6c1daeSBarry Smith 10285c6c1daeSBarry Smith Input Parameters: 10295c6c1daeSBarry Smith + bag - the bag of values 10305c6c1daeSBarry Smith - prefix - the prefix to prepend all Bag item names with. 10315c6c1daeSBarry Smith 10325c6c1daeSBarry Smith NOTES: Must be called prior to registering any of the bag items. 10335c6c1daeSBarry Smith 1034db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()` 1035db781477SPatrick Sanan `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()` 10365c6c1daeSBarry Smith @*/ 10375c6c1daeSBarry Smith 10385c6c1daeSBarry Smith PetscErrorCode PetscBagSetOptionsPrefix(PetscBag bag, const char pre[]) 10395c6c1daeSBarry Smith { 10405c6c1daeSBarry Smith PetscFunctionBegin; 10415f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 10425f80ce2aSJacob Faibussowitsch if (pre) { 10435f80ce2aSJacob Faibussowitsch PetscValidCharPointer(pre,2); 10445f80ce2aSJacob Faibussowitsch PetscCheck(pre[0] != '-',PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Options prefix should not begin with a hyphen"); 10459566063dSJacob Faibussowitsch PetscCall(PetscFree(bag->bagprefix)); 10469566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(pre,&(bag->bagprefix))); 10479566063dSJacob Faibussowitsch } else PetscCall(PetscFree(bag->bagprefix)); 10485c6c1daeSBarry Smith PetscFunctionReturn(0); 10495c6c1daeSBarry Smith } 1050ffb7e86cSMatthew G. Knepley 1051ffb7e86cSMatthew G. Knepley /*@C 1052ffb7e86cSMatthew G. Knepley PetscBagGetNames - Get the names of all entries in the bag 1053ffb7e86cSMatthew G. Knepley 1054ffb7e86cSMatthew G. Knepley Not collective 1055ffb7e86cSMatthew G. Knepley 1056ffb7e86cSMatthew G. Knepley Input Parameters: 1057ffb7e86cSMatthew G. Knepley + bag - the bag of values 1058ffb7e86cSMatthew G. Knepley - names - array of the correct size to hold names 1059ffb7e86cSMatthew G. Knepley 1060ffb7e86cSMatthew G. Knepley Output Parameter: 1061ffb7e86cSMatthew G. Knepley . names - array of char pointers for names 1062ffb7e86cSMatthew G. Knepley 1063ffb7e86cSMatthew G. Knepley Level: intermediate 1064ffb7e86cSMatthew G. Knepley 1065db781477SPatrick Sanan .seealso: `PetscBag`, `PetscBagGetName()`, `PetscBagSetName()`, `PetscBagCreate()`, `PetscBagGetData()` 1066db781477SPatrick Sanan `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`, `PetscBagRegisterEnum()` 1067ffb7e86cSMatthew G. Knepley @*/ 1068ffb7e86cSMatthew G. Knepley PetscErrorCode PetscBagGetNames(PetscBag bag, const char *names[]) 1069ffb7e86cSMatthew G. Knepley { 1070ffb7e86cSMatthew G. Knepley PetscBagItem nitem = bag->bagitems; 1071ffb7e86cSMatthew G. Knepley 1072ffb7e86cSMatthew G. Knepley PetscFunctionBegin; 10735f80ce2aSJacob Faibussowitsch PetscValidPointer(bag,1); 10745f80ce2aSJacob Faibussowitsch PetscValidPointer(names,2); 10755f80ce2aSJacob Faibussowitsch for (PetscInt n = 0; nitem; ++n, nitem = nitem->next) names[n] = nitem->name; 1076ffb7e86cSMatthew G. Knepley PetscFunctionReturn(0); 1077ffb7e86cSMatthew G. Knepley } 1078